| Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DK954270|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0019_P24, 5'
(416 letters)
Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|O49347|PSBY_ARATH Photosystem II core complex proteins psbY, ... 96 4e-20
sp|P80470|PSBY_SPIOL Photosystem II core complex proteins psbY, ... 94 3e-19
sp|Q31AA8|PSBY_PROM9 Photosystem II protein Y OS=Prochlorococcus... 35 0.12
sp|P59907|PSBY_PROMP Photosystem II protein Y OS=Prochlorococcus... 33 0.45
sp|A2BRU6|PSBY_PROMS Photosystem II protein Y OS=Prochlorococcus... 33 0.58
sp|A8G5I7|PSBY_PROM2 Photosystem II protein Y OS=Prochlorococcus... 32 0.76
sp|A2BXA4|PSBY_PROM5 Photosystem II protein Y OS=Prochlorococcus... 32 0.99
sp|P47775|GPR12_HUMAN Probable G-protein coupled receptor 12 OS=... 32 0.99
sp|Q7VQX7|SYR_BLOFL Arginyl-tRNA synthetase OS=Blochmannia flori... 31 2.2
sp|Q9KCE0|SLEB_BACHD Spore cortex-lytic enzyme OS=Bacillus halod... 30 2.9
sp|Q6LA43|APRR2_ARATH Two-component response regulator-like APRR... 30 2.9
sp|P51206|PSBY_PORPU Photosystem II protein Y OS=Porphyra purpur... 30 3.8
sp|A5GAQ4|LEXA_GEOUR LexA repressor OS=Geobacter uraniireducens ... 30 3.8
sp|Q9I387|GLSA_PSEAE Glutaminase OS=Pseudomonas aeruginosa GN=gl... 30 3.8
sp|Q02KC3|GLSA_PSEAB Glutaminase OS=Pseudomonas aeruginosa (stra... 30 3.8
sp|Q8CAI1|CC142_MOUSE Coiled-coil domain-containing protein 142 ... 30 3.8
sp|Q4L563|QOX3_STAHJ Probable quinol oxidase subunit 3 OS=Staphy... 30 4.9
sp|Q10WA3|PSBY_TRIEI Photosystem II protein Y OS=Trichodesmium e... 30 4.9
sp|Q1XDT1|PSBY_PORYE Photosystem II protein Y OS=Porphyra yezoen... 30 4.9
sp|Q8IWI9|MGAP_HUMAN MAX gene-associated protein OS=Homo sapiens... 30 4.9
sp|O59786|HEMH_SCHPO Ferrochelatase, mitochondrial OS=Schizosacc... 30 4.9
sp|Q2J097|GLSA_RHOP2 Glutaminase OS=Rhodopseudomonas palustris (... 30 4.9
sp|O77700|ADA2B_BOVIN Alpha-2B adrenergic receptor (Fragment) OS... 30 4.9
sp|A4XNJ7|GLSA_PSEMY Glutaminase OS=Pseudomonas mendocina (strai... 29 6.4
sp|Q9WTS2|FUT8_MOUSE Alpha-(1,6)-fucosyltransferase OS=Mus muscu... 29 6.4
sp|Q7VD03|PSBY_PROMA Photosystem II protein Y OS=Prochlorococcus... 29 8.4
sp|P49543|PSBY_ODOSI Photosystem II protein Y OS=Odontella sinen... 29 8.4
sp|O55134|PCD12_MOUSE Protocadherin-12 OS=Mus musculus GN=Pcdh12... 29 8.4
sp|Q13BB8|GLSA_RHOPS Glutaminase OS=Rhodopseudomonas palustris (... 29 8.4
sp|Q6N239|GLSA_RHOPA Glutaminase OS=Rhodopseudomonas palustris G... 29 8.4
>sp|O49347|PSBY_ARATH Photosystem II core complex proteins psbY,
chloroplastic OS=Arabidopsis thaliana GN=PSBY PE=2 SV=1
Length = 189
Score = 96.3 bits (238), Expect = 4e-20
Identities = 54/91 (59%), Positives = 69/91 (75%), Gaps = 2/91 (2%)
Frame = +1
Query: 1 VLFNILQPAINQLDRMKTSKGIVVSLGLGA--AASGVFPGRSDAIQEMSSIAAADNDSRG 174
VL+NILQPAINQ+++M+ SKGIVV LG+G AASG+ +A + AAA +DSRG
Sbjct: 98 VLYNILQPAINQVNKMRESKGIVVGLGIGGGLAASGLLTPPPEAYAAAEA-AAASSDSRG 156
Query: 175 ILLLGVLIPAIGWVLFNILQPALNQFDKMRA 267
LLL V+ PA+ WVL+NILQPALNQ +KMR+
Sbjct: 157 QLLLIVVTPALLWVLYNILQPALNQINKMRS 187
Score = 60.5 bits (145), Expect = 3e-09
Identities = 29/52 (55%), Positives = 42/52 (80%), Gaps = 2/52 (3%)
Frame = +1
Query: 124 AIQEMSSIAAAD--NDSRGILLLGVLIPAIGWVLFNILQPALNQFDKMRAQK 273
AIQ+++ +AAA+ +D+RG+ LL ++PAI WVL+NILQPA+NQ +KMR K
Sbjct: 66 AIQQIAQLAAANASSDNRGLALLLPIVPAIAWVLYNILQPAINQVNKMRESK 117
>sp|P80470|PSBY_SPIOL Photosystem II core complex proteins psbY,
chloroplastic OS=Spinacia oleracea GN=PSBY PE=1 SV=2
Length = 199
Score = 93.6 bits (231), Expect = 3e-19
Identities = 53/92 (57%), Positives = 67/92 (72%), Gaps = 2/92 (2%)
Frame = +1
Query: 1 VLFNILQPAINQLDRMKTSK-GIVVSLGL-GAAASGVFPGRSDAIQEMSSIAAADNDSRG 174
VLFNILQPA+NQ+++M+ K +V LGL G A SG+ +A Q S A +D+RG
Sbjct: 109 VLFNILQPALNQINKMRNEKKAFIVGLGLSGLATSGLLLATPEA-QAASEEIARGSDNRG 167
Query: 175 ILLLGVLIPAIGWVLFNILQPALNQFDKMRAQ 270
LLL V++PAIGWVLFNILQPALNQ +KMR+Q
Sbjct: 168 TLLLLVVLPAIGWVLFNILQPALNQLNKMRSQ 199
Score = 64.3 bits (155), Expect = 2e-10
Identities = 40/86 (46%), Positives = 53/86 (61%), Gaps = 7/86 (8%)
Frame = +1
Query: 37 LDRMKTSKGIVVSLGLGAAASGVFP--GRSD---AIQEMSSIAA--ADNDSRGILLLGVL 195
L K G+ + A A VF G D A+Q+++ IAA +D+RG+ LL +
Sbjct: 43 LSNSKLPMGLSPIITAPAIAGAVFATLGSVDPAFAVQQLADIAAEAGTSDNRGLALLLPI 102
Query: 196 IPAIGWVLFNILQPALNQFDKMRAQK 273
IPA+GWVLFNILQPALNQ +KMR +K
Sbjct: 103 IPALGWVLFNILQPALNQINKMRNEK 128
>sp|Q31AA8|PSBY_PROM9 Photosystem II protein Y OS=Prochlorococcus
marinus (strain MIT 9312) GN=psbY PE=3 SV=1
Length = 37
Score = 35.0 bits (79), Expect = 0.12
Identities = 14/35 (40%), Positives = 23/35 (65%)
Frame = +1
Query: 169 RGILLLGVLIPAIGWVLFNILQPALNQFDKMRAQK 273
R I++ +I A+ WV+FNI +PA Q+D+ +K
Sbjct: 3 RAIVVFAPIIAAVAWVVFNIQKPAREQWDRQFGEK 37
>sp|P59907|PSBY_PROMP Photosystem II protein Y OS=Prochlorococcus
marinus subsp. pastoris (strain CCMP1378 / MED4) GN=psbY
PE=3 SV=1
Length = 38
Score = 33.1 bits (74), Expect = 0.45
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +1
Query: 169 RGILLLGVLIPAIGWVLFNILQPALNQFDK 258
R I++ +I A+ WV+FNI +PA QF++
Sbjct: 3 RAIVVFAPIIAALAWVVFNIQKPAREQFNR 32
>sp|A2BRU6|PSBY_PROMS Photosystem II protein Y OS=Prochlorococcus
marinus (strain AS9601) GN=psbY PE=3 SV=1
Length = 38
Score = 32.7 bits (73), Expect = 0.58
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +1
Query: 169 RGILLLGVLIPAIGWVLFNILQPALNQFDK 258
R I++ +I A+ WV+FNI +PA QF++
Sbjct: 3 RTIVVFAPIIAALAWVIFNIQKPAREQFNR 32
>sp|A8G5I7|PSBY_PROM2 Photosystem II protein Y OS=Prochlorococcus
marinus (strain MIT 9215) GN=psbY PE=3 SV=1
Length = 38
Score = 32.3 bits (72), Expect = 0.76
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +1
Query: 169 RGILLLGVLIPAIGWVLFNILQPALNQFDK 258
R I++ +I A+ WV+FNI +PA QF++
Sbjct: 3 RTIVVFAPIIAALAWVVFNIQKPAREQFNR 32
>sp|A2BXA4|PSBY_PROM5 Photosystem II protein Y OS=Prochlorococcus
marinus (strain MIT 9515) GN=psbY PE=3 SV=1
Length = 39
Score = 32.0 bits (71), Expect = 0.99
Identities = 12/30 (40%), Positives = 21/30 (70%)
Frame = +1
Query: 169 RGILLLGVLIPAIGWVLFNILQPALNQFDK 258
R +++ +I A+ WV+FNI +PA QF++
Sbjct: 3 RTLVVFAPIIAALAWVIFNIQKPAREQFNR 32
>sp|P47775|GPR12_HUMAN Probable G-protein coupled receptor 12
OS=Homo sapiens GN=GPR12 PE=2 SV=1
Length = 334
Score = 32.0 bits (71), Expect = 0.99
Identities = 19/55 (34%), Positives = 27/55 (49%)
Frame = -1
Query: 182 SKIPRESLSAAAMEDISWIASDRPGKTPEAAAPSPSDTTIPFDVFILSSWLMAGC 18
S +PR+ L AAA E+IS S R A P P P+D+ + +S + C
Sbjct: 10 SGLPRDYLDAAAAENISAAVSSR----VPAVEPEPELVVNPWDIVLCTSGTLISC 60
>sp|Q7VQX7|SYR_BLOFL Arginyl-tRNA synthetase OS=Blochmannia
floridanus GN=argS PE=3 SV=1
Length = 583
Score = 30.8 bits (68), Expect = 2.2
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -3
Query: 204 SRNKNTKKQNPTRIIVSSSNGGHL 133
++NKN+KK NP +I+ +GG+L
Sbjct: 294 NQNKNSKKNNPFGVIIQKKDGGYL 317
>sp|Q9KCE0|SLEB_BACHD Spore cortex-lytic enzyme OS=Bacillus
halodurans GN=sleB PE=3 SV=1
Length = 330
Score = 30.4 bits (67), Expect = 2.9
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = -1
Query: 200 GIRTPRSKIPRESLSAAAMEDISWIASDRPGKTPEAAAPSPSDTTIPFD 54
G+R PR+ P AA ++ + +RP TPE P+P + P++
Sbjct: 144 GVRQPRADRPGRDAPAAPRDERAPRREERPAPTPE-PTPAPPEEPTPYE 191
|
| Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DK954270|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0019_P24, 5'
(416 letters)
Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
tr|A9U315|A9U315_PHYPA Predicted protein (Fragment) OS=Physcomit... 106 7e-22
tr|B6SR26|B6SR26_MAIZE Photosystem II core complex proteins psbY... 104 2e-21
tr|A9SPH7|A9SPH7_PHYPA PsbY photosystem II polypeptide OS=Physco... 103 3e-21
tr|A9PJJ8|A9PJJ8_POPJC Putative uncharacterized protein OS=Popul... 103 3e-21
tr|A9PIV1|A9PIV1_POPJC Putative uncharacterized protein OS=Popul... 103 4e-21
tr|A9PJ80|A9PJ80_POPJC Putative uncharacterized protein OS=Popul... 102 7e-21
tr|B6SQV2|B6SQV2_MAIZE Photosystem II core complex proteins psbY... 102 1e-20
tr|A9TFS8|A9TFS8_PHYPA Predicted protein (Fragment) OS=Physcomit... 102 1e-20
tr|A9PJP0|A9PJP0_POPJC Putative uncharacterized protein OS=Popul... 100 4e-20
tr|A9NZQ0|A9NZQ0_PICSI Putative uncharacterized protein OS=Picea... 100 6e-20
tr|A9PJP1|A9PJP1_POPJC Putative uncharacterized protein OS=Popul... 99 1e-19
tr|A9NQA0|A9NQA0_PICSI Putative uncharacterized protein OS=Picea... 99 1e-19
tr|A9NL05|A9NL05_PICSI Putative uncharacterized protein OS=Picea... 99 1e-19
tr|Q6ZJ41|Q6ZJ41_ORYSJ cDNA clone:001-024-H10, full insert seque... 98 2e-19
tr|Q0J8C7|Q0J8C7_ORYSJ Os08g0119800 protein (Fragment) OS=Oryza ... 98 2e-19
tr|A2YQQ7|A2YQQ7_ORYSI Putative uncharacterized protein OS=Oryza... 98 2e-19
tr|Q8LAL4|Q8LAL4_ARATH Putative uncharacterized protein OS=Arabi... 96 7e-19
tr|Q549N8|Q549N8_ARATH Putative uncharacterized protein OS=Arabi... 96 7e-19
tr|B6SUJ7|B6SUJ7_MAIZE Photosystem II core complex proteins psbY... 95 2e-18
tr|B7FLH1|B7FLH1_MEDTR Putative uncharacterized protein OS=Medic... 95 2e-18
tr|A7P454|A7P454_VITVI Chromosome chr1 scaffold_5, whole genome ... 73 8e-12
tr|A4S5C8|A4S5C8_OSTLU Possible psbY, PSII-Y, photosystem II pol... 64 5e-09
tr|A8JKA1|A8JKA1_CHLRE Ycf32-related polyprotein of photosystem ... 63 6e-09
tr|A8I003|A8I003_CHLRE Ycf32-related subunit of photosystem II O... 62 1e-08
tr|Q00Y99|Q00Y99_OSTTA Manganese-binding protein PsbY, photosyst... 62 2e-08
tr|Q5K5A8|Q5K5A8_ORYSA PsbY-like protein OS=Oryza sativa GN=MgBP... 57 4e-07
tr|A4U431|A4U431_9PROT Cytochrome c assembly protein OS=Magnetos... 33 5.4
tr|Q6AAY8|Q6AAY8_PROAC Uroporphyrinogen-III synthase, HemD OS=Pr... 33 7.1
tr|A4GL49|A4GL49_9PROT Cytochrome c biogenesis factor OS=Magneto... 33 7.1
tr|A9SN08|A9SN08_PHYPA Predicted protein OS=Physcomitrella paten... 33 7.1
>tr|A9U315|A9U315_PHYPA Predicted protein (Fragment)
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_155209 PE=4 SV=1
Length = 137
Score = 106 bits (264), Expect = 7e-22
Identities = 51/88 (57%), Positives = 72/88 (81%)
Frame = +1
Query: 1 VLFNILQPAINQLDRMKTSKGIVVSLGLGAAASGVFPGRSDAIQEMSSIAAADNDSRGIL 180
VLFNILQPA+NQ+D+M+ +K +V GLGAAA+ + +DA QE + IA D+D+RG++
Sbjct: 51 VLFNILQPALNQVDKMRGAKALVAGAGLGAAATLMAAPHADAAQEFAQIA--DSDARGLI 108
Query: 181 LLGVLIPAIGWVLFNILQPALNQFDKMR 264
++G+L+PAIGWVLFNIL+PALNQ +KM+
Sbjct: 109 IVGLLLPAIGWVLFNILRPALNQIEKMQ 136
Score = 61.6 bits (148), Expect = 2e-08
Identities = 31/50 (62%), Positives = 36/50 (72%)
Frame = +1
Query: 124 AIQEMSSIAAADNDSRGILLLGVLIPAIGWVLFNILQPALNQFDKMRAQK 273
A+ +A A+ D+R + LL LIPAIGWVLFNILQPALNQ DKMR K
Sbjct: 21 AMASQQIMALAEGDNRVVALLIPLIPAIGWVLFNILQPALNQVDKMRGAK 70
>tr|B6SR26|B6SR26_MAIZE Photosystem II core complex proteins psbY
OS=Zea mays PE=2 SV=1
Length = 176
Score = 104 bits (259), Expect = 2e-21
Identities = 57/94 (60%), Positives = 77/94 (81%), Gaps = 5/94 (5%)
Frame = +1
Query: 1 VLFNILQPAINQLDRMKTSKGIVVSLGLGAAASGVF--PGRSDAI-QEMSSIAAAD--ND 165
VL+NILQPA+NQL+RM++S+ + LGLGAAA+G+ P S A+ Q++++IAAA +D
Sbjct: 82 VLYNILQPALNQLNRMRSSQAVAAGLGLGAAAAGMAAPPEASAAVVQDLAAIAAAAPADD 141
Query: 166 SRGILLLGVLIPAIGWVLFNILQPALNQFDKMRA 267
SRG+LLL V+ PAIGWVLFNILQPALNQ ++MR+
Sbjct: 142 SRGLLLLIVVAPAIGWVLFNILQPALNQLNRMRS 175
Score = 63.9 bits (154), Expect = 4e-09
Identities = 42/93 (45%), Positives = 55/93 (59%), Gaps = 6/93 (6%)
Frame = +1
Query: 13 ILQPAINQLDRM--KTSKGIV---VSLGLGAAASGVFPGRSDA-IQEMSSIAAADNDSRG 174
+L+PA R TS G V V G A + V DA + ++ + A A DSRG
Sbjct: 9 LLKPAAKAAARSAPSTSSGSVSLRVRTGQAAKKAAVSASSPDAALADVVAAADAGGDSRG 68
Query: 175 ILLLGVLIPAIGWVLFNILQPALNQFDKMRAQK 273
LLL V+ PAIGWVL+NILQPALNQ ++MR+ +
Sbjct: 69 QLLLVVVAPAIGWVLYNILQPALNQLNRMRSSQ 101
>tr|A9SPH7|A9SPH7_PHYPA PsbY photosystem II polypeptide
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_166016 PE=4 SV=1
Length = 368
Score = 103 bits (258), Expect = 3e-21
Identities = 50/90 (55%), Positives = 72/90 (80%)
Frame = +1
Query: 1 VLFNILQPAINQLDRMKTSKGIVVSLGLGAAASGVFPGRSDAIQEMSSIAAADNDSRGIL 180
VLFNIL+PA+NQ+D+MK +K +V GLGA A P +DA QE++ +A D+D+RG++
Sbjct: 110 VLFNILKPALNQVDKMKAAKSLVAGAGLGALALVAAP-HADAAQEIAQVA--DSDARGLI 166
Query: 181 LLGVLIPAIGWVLFNILQPALNQFDKMRAQ 270
++G+L+PA+GWVLFNIL+PALNQ +KM+ Q
Sbjct: 167 IIGLLLPAVGWVLFNILRPALNQIEKMQDQ 196
Score = 90.5 bits (223), Expect = 4e-17
Identities = 45/96 (46%), Positives = 73/96 (76%), Gaps = 9/96 (9%)
Frame = +1
Query: 1 VLFNILQPAINQLDRMKTS---------KGIVVSLGLGAAASGVFPGRSDAIQEMSSIAA 153
VLFNIL+PA+NQ+++M+ +G++ +LGLG A+ + P +DA QE++++A
Sbjct: 178 VLFNILRPALNQIEKMQDQGNAAAITRKRGVIGALGLGTASLFLAP-HADAAQEIATLA- 235
Query: 154 ADNDSRGILLLGVLIPAIGWVLFNILQPALNQFDKM 261
D+DSRG++++G+L+PA+GWVLFNIL+PALNQ + +
Sbjct: 236 -DSDSRGLIIIGLLLPAVGWVLFNILKPALNQINNI 270
Score = 75.1 bits (183), Expect = 2e-12
Identities = 46/102 (45%), Positives = 66/102 (64%), Gaps = 15/102 (14%)
Frame = +1
Query: 1 VLFNILQPAINQLD-------------RMKTSKGIVVSLGLGAAASGVFPG-RSDA-IQE 135
VLFNIL+PA+NQ++ R K G++ + G+ AAA + ++DA +QE
Sbjct: 255 VLFNILKPALNQINNIVEGNDTGAPVKRGKKFGGMIGATGISAAAMSLLAAPKADAQVQE 314
Query: 136 MSSIAAADNDSRGILLLGVLIPAIGWVLFNILQPALNQFDKM 261
++ + A D+R ++LL +L PAIGWVLFNIL+PALNQ DKM
Sbjct: 315 IAQLGA---DTRPLILLFILAPAIGWVLFNILKPALNQVDKM 353
Score = 65.1 bits (157), Expect = 2e-09
Identities = 34/71 (47%), Positives = 48/71 (67%), Gaps = 3/71 (4%)
Frame = +1
Query: 70 VSLGLGAAASGVFPGRSDAIQEMSS---IAAADNDSRGILLLGVLIPAIGWVLFNILQPA 240
+S+G A A +F + + ++S +A A+ D+R + LL L+PAIGWVLFNIL+PA
Sbjct: 59 ISVGANALAGAMFAAMATSESALASQQIMALAEGDNRVVALLIPLVPAIGWVLFNILKPA 118
Query: 241 LNQFDKMRAQK 273
LNQ DKM+A K
Sbjct: 119 LNQVDKMKAAK 129
>tr|A9PJJ8|A9PJJ8_POPJC Putative uncharacterized protein OS=Populus
jackii PE=2 SV=1
Length = 196
Score = 103 bits (258), Expect = 3e-21
Identities = 54/91 (59%), Positives = 70/91 (76%), Gaps = 1/91 (1%)
Frame = +1
Query: 1 VLFNILQPAINQLDRMKTSKGIVVSLGLGAAASGVFPGRSDA-IQEMSSIAAADNDSRGI 177
VLFNILQPA+NQ++RM+ +KG++V LGLG A+ F DA E++ IA A +D+RG
Sbjct: 106 VLFNILQPALNQINRMRQTKGVIVGLGLGGLAASGFISTPDASASEIAMIAEATSDNRGT 165
Query: 178 LLLGVLIPAIGWVLFNILQPALNQFDKMRAQ 270
LLL V+ PAI WVL+NILQPALNQ +KMR+Q
Sbjct: 166 LLLIVVAPAILWVLYNILQPALNQINKMRSQ 196
Score = 60.5 bits (145), Expect = 4e-08
Identities = 41/94 (43%), Positives = 52/94 (55%), Gaps = 12/94 (12%)
Frame = +1
Query: 28 INQLDRMKTSKGIVVS-------LGLGAAASGVFPGRSD-----AIQEMSSIAAADNDSR 171
++ L + KG+ +S L A A +F S A Q+++ IA DN R
Sbjct: 34 VSLLSMLNLPKGLTISKPADNTVLTGTAIAGAIFTTLSSCEPAFAAQQIAEIAEGDN--R 91
Query: 172 GILLLGVLIPAIGWVLFNILQPALNQFDKMRAQK 273
GI LL LIPAI WVLFNILQPALNQ ++MR K
Sbjct: 92 GIALLLPLIPAIAWVLFNILQPALNQINRMRQTK 125
>tr|A9PIV1|A9PIV1_POPJC Putative uncharacterized protein OS=Populus
jackii PE=2 SV=1
Length = 196
Score = 103 bits (257), Expect = 4e-21
Identities = 54/91 (59%), Positives = 70/91 (76%), Gaps = 1/91 (1%)
Frame = +1
Query: 1 VLFNILQPAINQLDRMKTSKGIVVSLGLGAAASGVFPGRSDA-IQEMSSIAAADNDSRGI 177
VLFNILQPA+NQ++RM+ +KG++V LGLG A+ F DA E++ IA A +D+RG
Sbjct: 106 VLFNILQPALNQINRMRQTKGVIVGLGLGGLAASGFISTPDASASEIAMIAEAASDNRGT 165
Query: 178 LLLGVLIPAIGWVLFNILQPALNQFDKMRAQ 270
LLL V+ PAI WVL+NILQPALNQ +KMR+Q
Sbjct: 166 LLLIVVAPAILWVLYNILQPALNQINKMRSQ 196
Score = 60.5 bits (145), Expect = 4e-08
Identities = 41/94 (43%), Positives = 52/94 (55%), Gaps = 12/94 (12%)
Frame = +1
Query: 28 INQLDRMKTSKGIVVS-------LGLGAAASGVFPGRSD-----AIQEMSSIAAADNDSR 171
++ L + KG+ +S L A A +F S A Q+++ IA DN R
Sbjct: 34 VSLLSMLNLPKGLTISKPADNTVLTGTAIAGAIFTTLSSCEPAFAAQQIAEIAEGDN--R 91
Query: 172 GILLLGVLIPAIGWVLFNILQPALNQFDKMRAQK 273
GI LL LIPAI WVLFNILQPALNQ ++MR K
Sbjct: 92 GIALLLPLIPAIAWVLFNILQPALNQINRMRQTK 125
>tr|A9PJ80|A9PJ80_POPJC Putative uncharacterized protein OS=Populus
jackii PE=2 SV=1
Length = 196
Score = 102 bits (255), Expect = 7e-21
Identities = 54/91 (59%), Positives = 70/91 (76%), Gaps = 1/91 (1%)
Frame = +1
Query: 1 VLFNILQPAINQLDRMKTSKGIVVSLGLGA-AASGVFPGRSDAIQEMSSIAAADNDSRGI 177
VLFNILQPA+NQ++RM+ +KG++V LGLG AASG + E++ IA A +D+RG
Sbjct: 106 VLFNILQPALNQINRMRQTKGVIVGLGLGGLAASGFISTPHASASEIAMIADATSDNRGT 165
Query: 178 LLLGVLIPAIGWVLFNILQPALNQFDKMRAQ 270
LLL V+ PAI WVL+NILQPALNQ +KMR+Q
Sbjct: 166 LLLIVVAPAILWVLYNILQPALNQINKMRSQ 196
Score = 58.9 bits (141), Expect = 1e-07
Identities = 31/50 (62%), Positives = 37/50 (74%)
Frame = +1
Query: 124 AIQEMSSIAAADNDSRGILLLGVLIPAIGWVLFNILQPALNQFDKMRAQK 273
A Q+++ IA DN RG+ LL LIPAI WVLFNILQPALNQ ++MR K
Sbjct: 78 AAQQIAEIAEGDN--RGLALLLPLIPAIAWVLFNILQPALNQINRMRQTK 125
>tr|B6SQV2|B6SQV2_MAIZE Photosystem II core complex proteins psbY
OS=Zea mays PE=2 SV=1
Length = 191
Score = 102 bits (253), Expect = 1e-20
Identities = 54/95 (56%), Positives = 74/95 (77%), Gaps = 6/95 (6%)
Frame = +1
Query: 1 VLFNILQPAINQLDRMKTSKGIVVSLGLGAAASGVFPGRSDA----IQEMSSIAAAD--N 162
VL+NILQPA+NQL+RM++S+ + LGLGAAA+ +A +Q++++IAAA +
Sbjct: 96 VLYNILQPALNQLNRMRSSQAVAAGLGLGAAAAAGMAAPPEASAAVVQDLAAIAAAAPAD 155
Query: 163 DSRGILLLGVLIPAIGWVLFNILQPALNQFDKMRA 267
DSRG+LLL V+ PAIGWVLFNILQPALNQ ++MR+
Sbjct: 156 DSRGLLLLIVVAPAIGWVLFNILQPALNQLNRMRS 190
Score = 61.6 bits (148), Expect = 2e-08
Identities = 35/79 (44%), Positives = 50/79 (63%), Gaps = 4/79 (5%)
Frame = +1
Query: 49 KTSKGIVVSLGLGAAASGVFPGR--SDAIQEMSSIAAAD--NDSRGILLLGVLIPAIGWV 216
+ +K +S+ + +G F S ++ +AAAD DSRG LLL V+ PAIGWV
Sbjct: 37 QAAKKAALSVSASSTLAGAFLAALASSPDAALADVAAADAGGDSRGQLLLVVVAPAIGWV 96
Query: 217 LFNILQPALNQFDKMRAQK 273
L+NILQPALNQ ++MR+ +
Sbjct: 97 LYNILQPALNQLNRMRSSQ 115
>tr|A9TFS8|A9TFS8_PHYPA Predicted protein (Fragment)
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_8237 PE=4 SV=1
Length = 130
Score = 102 bits (253), Expect = 1e-20
Identities = 48/88 (54%), Positives = 73/88 (82%)
Frame = +1
Query: 1 VLFNILQPAINQLDRMKTSKGIVVSLGLGAAASGVFPGRSDAIQEMSSIAAADNDSRGIL 180
VLFNIL+PA+NQ+D+M+++K +V GLG+ A P +DA QE++ +A ++D+RG++
Sbjct: 45 VLFNILKPALNQVDKMRSAKALVAGAGLGSLAMLAAP-HADAAQEIAQVA--ESDARGLI 101
Query: 181 LLGVLIPAIGWVLFNILQPALNQFDKMR 264
++G+L+PAIGWVLFNIL+PALNQF+KM+
Sbjct: 102 IIGLLLPAIGWVLFNILRPALNQFEKMQ 129
Score = 60.5 bits (145), Expect = 4e-08
Identities = 29/50 (58%), Positives = 37/50 (74%)
Frame = +1
Query: 124 AIQEMSSIAAADNDSRGILLLGVLIPAIGWVLFNILQPALNQFDKMRAQK 273
A+ +A A+ D+R + LL L+PAIGWVLFNIL+PALNQ DKMR+ K
Sbjct: 15 ALASQQIMALAEGDNRVVALLIPLVPAIGWVLFNILKPALNQVDKMRSAK 64
>tr|A9PJP0|A9PJP0_POPJC Putative uncharacterized protein OS=Populus
jackii PE=2 SV=1
Length = 192
Score = 100 bits (249), Expect = 4e-20
Identities = 51/90 (56%), Positives = 69/90 (76%), Gaps = 1/90 (1%)
Frame = +1
Query: 1 VLFNILQPAINQLDRMKTSKGIVVSLGLGAAASGVFPGRSDA-IQEMSSIAAADNDSRGI 177
VLFNILQPA+NQ++RM+ ++G+++ LGLG A+ F DA E++ IA A +DSRG
Sbjct: 103 VLFNILQPALNQVNRMRETRGVIIGLGLGGLAASGFMSTPDASASEIARIAEATSDSRGT 162
Query: 178 LLLGVLIPAIGWVLFNILQPALNQFDKMRA 267
LLL V+ PAI WVL+NILQPALNQ ++MR+
Sbjct: 163 LLLLVVAPAILWVLYNILQPALNQINRMRS 192
Score = 57.4 bits (137), Expect = 4e-07
Identities = 30/47 (63%), Positives = 36/47 (76%)
Frame = +1
Query: 124 AIQEMSSIAAADNDSRGILLLGVLIPAIGWVLFNILQPALNQFDKMR 264
A Q+++ IA DN RG+ LL LIPAI WVLFNILQPALNQ ++MR
Sbjct: 75 AAQQIAEIAEGDN--RGLALLLPLIPAIAWVLFNILQPALNQVNRMR 119
>tr|A9NZQ0|A9NZQ0_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 207
Score = 99.8 bits (247), Expect = 6e-20
Identities = 57/96 (59%), Positives = 72/96 (75%), Gaps = 5/96 (5%)
Frame = +1
Query: 1 VLFNILQPAINQLDRMKTSKGIVVSLGLGAAASGVF---PGRSDAIQEMSSIAA--ADND 165
VL+NILQPA+NQ++RMK + G+V GLGAA F P + A Q + +AA A+ND
Sbjct: 113 VLYNILQPALNQINRMKGA-GLVAFAGLGAAGGAAFLSNPEEAHAEQLVFDLAAKAANND 171
Query: 166 SRGILLLGVLIPAIGWVLFNILQPALNQFDKMRAQK 273
+RG+LLL V+IPAIGWVLFNILQPALNQ +KMR+ K
Sbjct: 172 NRGLLLLIVVIPAIGWVLFNILQPALNQINKMRSGK 207
Score = 58.9 bits (141), Expect = 1e-07
Identities = 30/61 (49%), Positives = 38/61 (62%)
Frame = +1
Query: 82 LGAAASGVFPGRSDAIQEMSSIAAADNDSRGILLLGVLIPAIGWVLFNILQPALNQFDKM 261
+GAA G A + A +DSRG LLL L+PAI WVL+NILQPALNQ ++M
Sbjct: 69 MGAALIGALSSCDSAAAAQEVMELAASDSRGTLLLLPLVPAIAWVLYNILQPALNQINRM 128
Query: 262 R 264
+
Sbjct: 129 K 129
|