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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK954329
Clone id TST39A01NGRL0020_C12
Library
Length 642
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0020_C12. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
AGCTGAGAAGCATGCATGAAAGATGGGAGGCTTGCAAGGGTGAGCACTTTGATGACGACA
AGCTCCTCTTCTCTGTGAAGAAGAGCTCCATGGTTTCATTCAAAACCCATCTTGAAATCT
TCCTTCAAGGGAATGAGAATGACGATGCTCCGGATTTCGAAGTCAAGGGCAACTTCTTCC
AGCGCGAGGCACAGATCTTCCACAAGGACCAGCTCATAGCAGAGGTGAAGAGAAAGTACA
CAGTTGGAAATGTGCTCTTGGACAAGCACACATTCAGTGTTGTGGTCTTCCCTAATGTGG
ACCAAGCTTTTGTGGCAGCTCTTGTGATCATCATGGACCGTATCCATGAGGACTAGATGG
CTTTGACAGCCCCGCATGAGCAAGCCCGCCCTTCGTCTTCATCCTGTCCTGCCACCATCT
ACCTAAGGATGTCCCCTTGTTTTTGCATAAGCATTCCTTCACCGCCATATCCATCTTTCT
GTTTGTGGTTTCCATTGCAAGTAGCTTAGTTTGTAAGTTTGACCCCTAGTCAAGGTAACT
GGTTTTTGTTACATCATTTTGCTTTGCTTTTCTTGAAGCTGCCTTTTTGGTGGTCCTCCA
ATGCAATGCTCTTATATCCCGAATGTGGAGTGTAAATTGCAC
■■Homology search results ■■ -
sp_hit_id Q9LZX1
Definition sp|Q9LZX1|Y5175_ARATH UPF0706 protein At5g01750 OS=Arabidopsis thaliana
Align length 117
Score (bit) 86.7
E-value 1.0e-16
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK954329|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0020_C12, 5'
         (642 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9LZX1|Y5175_ARATH UPF0706 protein At5g01750 OS=Arabidopsis t...    87   1e-16
sp|Q9BYQ2|KRA94_HUMAN Keratin-associated protein 9-4 OS=Homo sap...    33   1.6  
sp|Q09165|DIG1_CAEEL Mesocentin OS=Caenorhabditis elegans GN=dig...    33   1.6  
sp|Q9BYQ3|KRA93_HUMAN Keratin-associated protein 9-3 OS=Homo sap...    30   8.1  
sp|Q9BYQ4|KRA92_HUMAN Keratin-associated protein 9-2 OS=Homo sap...    30   8.1  
sp|A8MXZ3|KR923_HUMAN Putative keratin-associated protein 9-2-li...    30   8.1  

>sp|Q9LZX1|Y5175_ARATH UPF0706 protein At5g01750 OS=Arabidopsis
           thaliana GN=At5g01750 PE=1 SV=1
          Length = 217

 Score = 86.7 bits (213), Expect = 1e-16
 Identities = 42/117 (35%), Positives = 69/117 (58%), Gaps = 2/117 (1%)
 Frame = +3

Query: 9   SMHERWEACKGEHFDDDXXXXXXXXXXXXXXXTHLEIFLQGNENDDAPDFEVKGNFFQRE 188
           SMH+RW+  +G   D                 T L++FL  N+++   DF VKG++ +R 
Sbjct: 97  SMHDRWQVFRGGSTDQRDLLYTVKRSSMLQLKTKLDVFLGHNKDEKRCDFRVKGSWLERS 156

Query: 189 AQIF--HKDQLIAEVKRKYTVGNVLLDKHTFSVVVFPNVDQAFVAALVIIMDRIHED 353
             ++    D ++A++ RK+TV +V L K  FSV V+PNVD AF+A+LV+I+D ++ +
Sbjct: 157 CVVYAGESDAIVAQMHRKHTVQSVFLGKDNFSVTVYPNVDYAFIASLVVILDDVNRE 213


>sp|Q9BYQ2|KRA94_HUMAN Keratin-associated protein 9-4 OS=Homo
           sapiens GN=KRTAP9-4 PE=2 SV=1
          Length = 154

 Score = 32.7 bits (73), Expect = 1.6
 Identities = 12/26 (46%), Positives = 13/26 (50%)
 Frame = +2

Query: 251 CALGQAHIQCCGLP*CGPSFCGSSCD 328
           C        CC  P C P+ CGSSCD
Sbjct: 66  CVTSCCQPSCCSTPCCQPTCCGSSCD 91


>sp|Q09165|DIG1_CAEEL Mesocentin OS=Caenorhabditis elegans GN=dig-1 PE=1
             SV=2
          Length = 13100

 Score = 32.7 bits (73), Expect = 1.6
 Identities = 21/55 (38%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
 Frame = +3

Query: 249   NVLLDKHTFSVVVFPN--VDQAFVAALVIIMDRIHED*MALTAPHEQARPSSSSC 407
             N L   HT++V V  N  VD +   A+    D +H D    TAP +  +PS SSC
Sbjct: 12875 NELPSDHTYTVCVMTNERVDNSTALAIDKNCDSLHID-QNTTAPEDYVKPSPSSC 12928


>sp|Q9BYQ3|KRA93_HUMAN Keratin-associated protein 9-3 OS=Homo
           sapiens GN=KRTAP9-3 PE=1 SV=1
          Length = 159

 Score = 30.4 bits (67), Expect = 8.1
 Identities = 11/25 (44%), Positives = 12/25 (48%)
 Frame = +2

Query: 251 CALGQAHIQCCGLP*CGPSFCGSSC 325
           C        CC  P C P+ CGSSC
Sbjct: 66  CVTSCCQPSCCSTPCCQPTCCGSSC 90


>sp|Q9BYQ4|KRA92_HUMAN Keratin-associated protein 9-2 OS=Homo
           sapiens GN=KRTAP9-2 PE=1 SV=2
          Length = 174

 Score = 30.4 bits (67), Expect = 8.1
 Identities = 11/25 (44%), Positives = 12/25 (48%)
 Frame = +2

Query: 251 CALGQAHIQCCGLP*CGPSFCGSSC 325
           C        CC  P C P+ CGSSC
Sbjct: 71  CVTSCCQPSCCSTPCCQPTCCGSSC 95


>sp|A8MXZ3|KR923_HUMAN Putative keratin-associated protein 9-2-like
           3 OS=Homo sapiens PE=3 SV=1
          Length = 250

 Score = 30.4 bits (67), Expect = 8.1
 Identities = 11/25 (44%), Positives = 12/25 (48%)
 Frame = +2

Query: 251 CALGQAHIQCCGLP*CGPSFCGSSC 325
           C        CC  P C P+ CGSSC
Sbjct: 71  CVASCCQPSCCSTPCCQPTCCGSSC 95
tr_hit_id B6T7N7
Definition tr|B6T7N7|B6T7N7_MAIZE Putative uncharacterized protein OS=Zea mays
Align length 117
Score (bit) 95.1
E-value 3.0e-18
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK954329|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0020_C12, 5'
         (642 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B6T7N7|B6T7N7_MAIZE Putative uncharacterized protein OS=Zea m...    95   3e-18
tr|B6SU53|B6SU53_MAIZE Putative uncharacterized protein OS=Zea m...    94   9e-18
tr|A9NL98|A9NL98_PICSI Putative uncharacterized protein OS=Picea...    94   9e-18
tr|A9NZT7|A9NZT7_PICSI Putative uncharacterized protein OS=Picea...    92   3e-17
tr|A7QFJ2|A7QFJ2_VITVI Chromosome chr8 scaffold_88, whole genome...    90   1e-16
tr|A2YJM7|A2YJM7_ORYSI Putative uncharacterized protein OS=Oryza...    86   1e-15
tr|A7QFJ1|A7QFJ1_VITVI Chromosome chr8 scaffold_88, whole genome...    85   4e-15
tr|Q84YM9|Q84YM9_ORYSJ Os07g0230700 protein OS=Oryza sativa subs...    83   1e-14
tr|A3BI01|A3BI01_ORYSJ Putative uncharacterized protein OS=Oryza...    83   1e-14
tr|A9T2I3|A9T2I3_PHYPA Predicted protein OS=Physcomitrella paten...    74   6e-12
tr|A9S6M4|A9S6M4_PHYPA Predicted protein OS=Physcomitrella paten...    70   8e-11
tr|Q9SF24|Q9SF24_ARATH F26K24.3 protein OS=Arabidopsis thaliana ...    67   7e-10
tr|B6TXU6|B6TXU6_MAIZE Putative uncharacterized protein OS=Zea m...    65   5e-09
tr|A9T0M4|A9T0M4_PHYPA Predicted protein OS=Physcomitrella paten...    65   5e-09
tr|Q10BI2|Q10BI2_ORYSJ Os03g0816800 protein OS=Oryza sativa subs...    64   1e-08
tr|Q9ZQR8|Q9ZQR8_ARATH Putative uncharacterized protein At2g1456...    60   1e-07
tr|Q8VYP1|Q8VYP1_ARATH Putative uncharacterized protein At2g1456...    60   1e-07
tr|A9SW48|A9SW48_PHYPA Predicted protein (Fragment) OS=Physcomit...    59   2e-07
tr|Q9LQ36|Q9LQ36_ARATH F14M2.3 protein OS=Arabidopsis thaliana G...    58   4e-07
tr|B8AMA3|B8AMA3_ORYSI Putative uncharacterized protein OS=Oryza...    57   7e-07
tr|A9T2I4|A9T2I4_PHYPA Predicted protein OS=Physcomitrella paten...    57   1e-06
tr|A9NZ78|A9NZ78_PICSI Putative uncharacterized protein OS=Picea...    54   6e-06
tr|B7FGI9|B7FGI9_MEDTR Putative uncharacterized protein OS=Medic...    54   8e-06
tr|Q9LSQ1|Q9LSQ1_ARATH Emb|CAB82745.1 OS=Arabidopsis thaliana GN...    52   2e-05
tr|Q9LYM3|Q9LYM3_ARATH Putative uncharacterized protein F18O21_1...    52   3e-05
tr|A7NY47|A7NY47_VITVI Chromosome chr6 scaffold_3, whole genome ...    52   4e-05
tr|B3H5L1|B3H5L1_ARATH Uncharacterized protein At3g10986.1 OS=Ar...    51   7e-05
tr|A5BMN9|A5BMN9_VITVI Putative uncharacterized protein OS=Vitis...    51   7e-05
tr|Q9LVZ8|Q9LVZ8_ARATH Gb|AAD55470.1 (Putative uncharacterized p...    50   1e-04
tr|Q8LCQ1|Q8LCQ1_ARATH Putative uncharacterized protein OS=Arabi...    50   1e-04

>tr|B6T7N7|B6T7N7_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 210

 Score = 95.1 bits (235), Expect = 3e-18
 Identities = 46/117 (39%), Positives = 69/117 (58%), Gaps = 2/117 (1%)
 Frame = +3

Query: 9   SMHERWEACKGEHFDDDXXXXXXXXXXXXXXXTHLEIFLQGNENDDAPDFEVKGNFFQRE 188
           SMH RWE  +G+  ++                T ++IFL  N    A DF++KG++F+R 
Sbjct: 91  SMHNRWEVFRGDSSNESDLLFTAKKSSIFQLKTEMDIFLASNTAQQACDFKIKGSYFERS 150

Query: 189 AQIF--HKDQLIAEVKRKYTVGNVLLDKHTFSVVVFPNVDQAFVAALVIIMDRIHED 353
              +  +   +IA++ R++TV NVLL + TF V VFP+VD  FVAALV+I+D IH +
Sbjct: 151 CAFYLGNSSSMIAQMNRQFTVTNVLLGRDTFGVTVFPHVDYVFVAALVVILDEIHRE 207


>tr|B6SU53|B6SU53_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 207

 Score = 93.6 bits (231), Expect = 9e-18
 Identities = 45/117 (38%), Positives = 68/117 (58%), Gaps = 2/117 (1%)
 Frame = +3

Query: 9   SMHERWEACKGEHFDDDXXXXXXXXXXXXXXXTHLEIFLQGNENDDAPDFEVKGNFFQRE 188
           SMH RWE  +G+  ++                T ++IFL  N      DF++KG++F+R 
Sbjct: 88  SMHNRWEVFRGDSSNESDLLFTAKKSSIFQLKTEMDIFLASNTAQQVCDFKIKGSYFERS 147

Query: 189 AQIF--HKDQLIAEVKRKYTVGNVLLDKHTFSVVVFPNVDQAFVAALVIIMDRIHED 353
              +  +   +IA++ R++TV NVLL + TF V VFP+VD  FVAALV+I+D IH +
Sbjct: 148 CAFYLGNSSSMIAQMNRQFTVTNVLLGRDTFGVTVFPHVDYVFVAALVVILDEIHRE 204


>tr|A9NL98|A9NL98_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 222

 Score = 93.6 bits (231), Expect = 9e-18
 Identities = 47/117 (40%), Positives = 70/117 (59%)
 Frame = +3

Query: 3   LRSMHERWEACKGEHFDDDXXXXXXXXXXXXXXXTHLEIFLQGNENDDAPDFEVKGNFFQ 182
           L S+HE WEA +GE    +               T L ++L  N + D   F+VKG+FF+
Sbjct: 99  LLSLHETWEAYRGEGTKQENLIFTAGKSTLFQLRTSLNVYLGNNSHSD---FKVKGSFFE 155

Query: 183 REAQIFHKDQLIAEVKRKYTVGNVLLDKHTFSVVVFPNVDQAFVAALVIIMDRIHED 353
           R   I+    +IAE++RKYTV  VL+ + TF+V V+P VD AF+ ALV+I+D I+++
Sbjct: 156 RSCTIYQGRTVIAEMRRKYTVSQVLMGRDTFTVTVYPGVDYAFIVALVVILDEINKE 212


>tr|A9NZT7|A9NZT7_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 222

 Score = 92.0 bits (227), Expect = 3e-17
 Identities = 47/117 (40%), Positives = 70/117 (59%)
 Frame = +3

Query: 3   LRSMHERWEACKGEHFDDDXXXXXXXXXXXXXXXTHLEIFLQGNENDDAPDFEVKGNFFQ 182
           L S+HE WEA +GE    +               T L ++L  N + D   F+VKG+FF+
Sbjct: 99  LLSLHETWEAYRGEGTKQENLIFTAGKSTLFQLRTSLNVYLGNNCHSD---FKVKGSFFE 155

Query: 183 REAQIFHKDQLIAEVKRKYTVGNVLLDKHTFSVVVFPNVDQAFVAALVIIMDRIHED 353
           R   I+    +IAE++RKYTV  VL+ + TF+V V+P VD AF+ ALV+I+D I+++
Sbjct: 156 RSCTIYQGRTVIAEMRRKYTVSQVLMGRDTFTVTVYPGVDYAFIVALVVILDEINKE 212


>tr|A7QFJ2|A7QFJ2_VITVI Chromosome chr8 scaffold_88, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00037442001
           PE=4 SV=1
          Length = 216

 Score = 90.1 bits (222), Expect = 1e-16
 Identities = 42/117 (35%), Positives = 71/117 (60%), Gaps = 2/117 (1%)
 Frame = +3

Query: 9   SMHERWEACKGEHFDDDXXXXXXXXXXXXXXXTHLEIFLQGNENDDAPDFEVKGNFFQRE 188
           SMH RW+  +GE  D                 T L++FL  N  ++  DF++KG++F R 
Sbjct: 97  SMHRRWQVFRGESSDPKDLLFSTKLSSIIQLKTGLDVFLAANTKEEICDFKLKGSWFDRS 156

Query: 189 AQIF--HKDQLIAEVKRKYTVGNVLLDKHTFSVVVFPNVDQAFVAALVIIMDRIHED 353
             ++  + + +IA++ +K+ V +V+L K TF+V V+PNVD AF+ AL++I+D I++D
Sbjct: 157 CTVYAGNSNTIIAQMHKKHNVQSVVLGKDTFAVTVYPNVDYAFIVALIVILDEINDD 213


>tr|A2YJM7|A2YJM7_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_25434 PE=4 SV=1
          Length = 201

 Score = 86.3 bits (212), Expect = 1e-15
 Identities = 43/118 (36%), Positives = 66/118 (55%), Gaps = 3/118 (2%)
 Frame = +3

Query: 9   SMHERWEACKGEHFDD-DXXXXXXXXXXXXXXXTHLEIFLQGNENDDAPDFEVKGNFFQR 185
           SMH RWE  +G+     D               T ++IFL GN  +   DF++KG++F R
Sbjct: 81  SMHNRWEVYRGDSAHSCDKLFTVKKSSMLQLMKTEMDIFLAGNTAEQVCDFKIKGSYFDR 140

Query: 186 EAQIF--HKDQLIAEVKRKYTVGNVLLDKHTFSVVVFPNVDQAFVAALVIIMDRIHED 353
            +  +    + +IA++ RK+T  +V+L +  FS+ VFP VD  F+AALV I+D +H D
Sbjct: 141 SSAFYLGKSNTIIAQMNRKHTAASVVLGRDVFSITVFPQVDYVFIAALVAILDDVHRD 198


>tr|A7QFJ1|A7QFJ1_VITVI Chromosome chr8 scaffold_88, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00037441001
           PE=4 SV=1
          Length = 213

 Score = 84.7 bits (208), Expect = 4e-15
 Identities = 40/117 (34%), Positives = 69/117 (58%), Gaps = 2/117 (1%)
 Frame = +3

Query: 9   SMHERWEACKGEHFDDDXXXXXXXXXXXXXXXTHLEIFLQGNENDDAPDFEVKGNFFQRE 188
           SMH RW+  +GE  D                 T L +FL  N  ++  DF+++G++F R 
Sbjct: 97  SMHRRWKVFRGESSDPKDLLFSTKLSSIIQLKTALNVFLAANTKEEVCDFKLRGSWFDRS 156

Query: 189 AQIF--HKDQLIAEVKRKYTVGNVLLDKHTFSVVVFPNVDQAFVAALVIIMDRIHED 353
             ++  + + +IA++ +KY V +V+L K TF+V V+ NVD AF+ AL++I++ I++D
Sbjct: 157 CTVYAGNSNTIIAKMHKKYNVQSVVLGKDTFAVTVYTNVDYAFIVALIVILEEINKD 213


>tr|Q84YM9|Q84YM9_ORYSJ Os07g0230700 protein OS=Oryza sativa subsp.
           japonica GN=OSJNBa0086N05.106 PE=2 SV=1
          Length = 214

 Score = 83.2 bits (204), Expect = 1e-14
 Identities = 42/118 (35%), Positives = 65/118 (55%), Gaps = 3/118 (2%)
 Frame = +3

Query: 9   SMHERWEACKGEHFDD-DXXXXXXXXXXXXXXXTHLEIFLQGNENDDAPDFEVKGNFFQR 185
           SMH RWE  +G+     D               T ++IFL GN  +   DF++KG++  R
Sbjct: 94  SMHNRWEVYRGDSAHSCDKLFTVKKSSMLQLMKTEMDIFLAGNTAEQVCDFKIKGSYCDR 153

Query: 186 EAQIF--HKDQLIAEVKRKYTVGNVLLDKHTFSVVVFPNVDQAFVAALVIIMDRIHED 353
            +  +    + +IA++ RK+T  +V+L +  FS+ VFP VD  F+AALV I+D +H D
Sbjct: 154 SSAFYLGKSNTIIAQMNRKHTAASVVLGRDVFSITVFPQVDYVFIAALVAILDDVHRD 211


>tr|A3BI01|A3BI01_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_022673 PE=4 SV=1
          Length = 201

 Score = 83.2 bits (204), Expect = 1e-14
 Identities = 42/118 (35%), Positives = 65/118 (55%), Gaps = 3/118 (2%)
 Frame = +3

Query: 9   SMHERWEACKGEHFDD-DXXXXXXXXXXXXXXXTHLEIFLQGNENDDAPDFEVKGNFFQR 185
           SMH RWE  +G+     D               T ++IFL GN  +   DF++KG++  R
Sbjct: 81  SMHNRWEVYRGDSAHSCDKLFTVKKSSMLQLMKTEMDIFLAGNTAEQVCDFKIKGSYCDR 140

Query: 186 EAQIF--HKDQLIAEVKRKYTVGNVLLDKHTFSVVVFPNVDQAFVAALVIIMDRIHED 353
            +  +    + +IA++ RK+T  +V+L +  FS+ VFP VD  F+AALV I+D +H D
Sbjct: 141 SSAFYLGKSNTIIAQMNRKHTAASVVLGRDVFSITVFPQVDYVFIAALVAILDDVHRD 198


>tr|A9T2I3|A9T2I3_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_167699 PE=4 SV=1
          Length = 252

 Score = 74.3 bits (181), Expect = 6e-12
 Identities = 41/115 (35%), Positives = 59/115 (51%), Gaps = 1/115 (0%)
 Frame = +3

Query: 3   LRSMHERWEACKGEHFDDDXXXXXXXXXXXXXXXTHLEIFLQGNENDD-APDFEVKGNFF 179
           L +MH+ WE   G   + D               T +++ L  +      PD++VKG+FF
Sbjct: 131 LITMHDTWEILTG---NGDQVIATCKKSSVVQFKTSMDVMLASSTTGKHTPDYQVKGDFF 187

Query: 180 QREAQIFHKDQLIAEVKRKYTVGNVLLDKHTFSVVVFPNVDQAFVAALVIIMDRI 344
            R   +F   +  A V R+ T   V+LDK TF V +FP VDQA V AL++IMD +
Sbjct: 188 DRNLTVFRGAEQAALVTRQITFTTVILDKDTFGVTIFPGVDQALVLALIVIMDEV 242