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NBDC - LSDB Archive
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DK954334
Clone id TST39A01NGRL0020_C17
Library
Length 555
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0020_C17. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
CTACATTGCAAGTGACTGTGAGGGAGGGTGAGCCTTTGATATGGCAACAATGGCGGCTGC
AGCGCTTTCTTCAAGCACCTTCGCCGGCCAGGCTGTGTATAAGCCCCAGAGCGAGCTGAG
CTCTAAGGTAGGCAATGTGGGCGAGGCCCGCGTGTCCATGAGGAAAACAGTGTCAAAGAG
CTCCGACAGCCCCTGGTATGGCCCCGACCGCGTGAAGTACCTTGGCCCTTTCTCCGGCGA
GGCCCCCAGCTATCTCAAGGGAGAATTTCCCGGCGACTACGGCTGGGACACCGCCGGCCT
GTCTGCCGACCCTGAGACCTTCGCCAAGAACCGGGAGCTGGAGGTGATTCACGCACGGTG
GGCTATGTTGGGAGCCCTGGGCTGCGTGACCCCCGAGCTGCTGGCCAAGAATGGTGTGAA
GTTTGGCGAGGCCGTGTGGTTCAAGGCTGGCTCGCAGATCTTTGCTGAGGGTGGGCTTGA
CTACTTGGGCAACCCCAGCCTCGTCCACGCTCAGAGCATTCTGGCCATCTGGGCATGTCA
GGTAATTCTCATGGG
■■Homology search results ■■ -
sp_hit_id P12329
Definition sp|P12329|CB21_MAIZE Chlorophyll a-b binding protein 1, chloroplastic OS=Zea mays
Align length 147
Score (bit) 268.0
E-value 2.0e-71
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK954334|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0020_C17, 5'
         (555 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P12329|CB21_MAIZE Chlorophyll a-b binding protein 1, chloropl...   268   2e-71
sp|P12332|CB21_SILPR Chlorophyll a-b binding protein, chloroplas...   267   3e-71
sp|P14278|CB24_SOLLC Chlorophyll a-b binding protein 4, chloropl...   266   4e-71
sp|P20866|CB2_PHYPA Chlorophyll a-b binding protein, chloroplast...   266   5e-71
sp|P27493|CB22_TOBAC Chlorophyll a-b binding protein 21, chlorop...   265   9e-71
sp|P27518|CB21_GOSHI Chlorophyll a-b binding protein 151, chloro...   265   1e-70
sp|P12333|CB2A_SPIOL Chlorophyll a-b binding protein, chloroplas...   264   2e-70
sp|P07370|CB2B_SOLLC Chlorophyll a-b binding protein 1B, chlorop...   263   3e-70
sp|P27496|CB25_TOBAC Chlorophyll a-b binding protein 50, chlorop...   263   6e-70
sp|P27492|CB21_TOBAC Chlorophyll a-b binding protein 16, chlorop...   263   6e-70
sp|P07369|CB2G_SOLLC Chlorophyll a-b binding protein 3C, chlorop...   262   7e-70
sp|P27495|CB24_TOBAC Chlorophyll a-b binding protein 40, chlorop...   262   7e-70
sp|P04782|CB24_PETSP Chlorophyll a-b binding protein 25, chlorop...   262   9e-70
sp|P12470|CB25_NICPL Chlorophyll a-b binding protein E, chloropl...   261   1e-69
sp|P27491|CB27_TOBAC Chlorophyll a-b binding protein 7, chloropl...   261   2e-69
sp|P92919|CB23_APIGR Chlorophyll a-b binding protein, chloroplas...   261   2e-69
sp|P08221|CB21_CUCSA Chlorophyll a-b binding protein of LHCII ty...   261   2e-69
sp|P08963|CB22_HORVU Chlorophyll a-b binding protein 2, chloropl...   261   2e-69
sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 memb...   260   3e-69
sp|P27497|CB29_MAIZE Chlorophyll a-b binding protein M9, chlorop...   260   4e-69
sp|P04781|CB23_PETSP Chlorophyll a-b binding protein 22R, chloro...   259   5e-69
sp|P06671|CB22_MAIZE Chlorophyll a-b binding protein, chloroplas...   259   5e-69
sp|P04783|CB25_PETSP Chlorophyll a-b binding protein 91R, chloro...   259   6e-69
sp|P15193|CB2A_PINSY Chlorophyll a-b binding protein type 2 memb...   258   1e-68
sp|P24006|CB2A_PYRPY Chlorophyll a-b binding protein 1A, chlorop...   258   1e-68
sp|P09756|CB23_SOYBN Chlorophyll a-b binding protein 3, chloropl...   258   1e-68
sp|P12469|CB23_NICPL Chlorophyll a-b binding protein C, chloropl...   258   1e-68
sp|P04780|CB22_PETSP Chlorophyll a-b binding protein 22L, chloro...   256   4e-68
sp|P04779|CB21_PETSP Chlorophyll a-b binding protein 13, chlorop...   256   4e-68
sp|P15194|CB2B_PINSY Chlorophyll a-b binding protein type 2 memb...   256   5e-68

>sp|P12329|CB21_MAIZE Chlorophyll a-b binding protein 1,
           chloroplastic OS=Zea mays GN=CAB1 PE=3 SV=1
          Length = 262

 Score =  268 bits (684), Expect = 2e-71
 Identities = 126/147 (85%), Positives = 136/147 (92%), Gaps = 4/147 (2%)
 Frame = +2

Query: 125 KVGNVGEARVSMRKTVSK----SSDSPWYGPDRVKYLGPFSGEAPSYLKGEFPGDYGWDT 292
           KVG+ GE R++MRKTV K    +S SPWYGPDRVKYLGPFSGE PSYL GEFPGDYGWDT
Sbjct: 19  KVGSFGEGRITMRKTVGKPKVAASGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDT 78

Query: 293 AGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAEG 472
           AGLSADPETFAKNRELEVIH+RWAMLGALGCV PELL++NGVKFGEAVWFKAGSQIF+EG
Sbjct: 79  AGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEG 138

Query: 473 GLDYLGNPSLVHAQSILAIWACQVILM 553
           GLDYLGNPSL+HAQSILAIWACQV+LM
Sbjct: 139 GLDYLGNPSLIHAQSILAIWACQVVLM 165


>sp|P12332|CB21_SILPR Chlorophyll a-b binding protein, chloroplastic
           (Fragment) OS=Silene pratensis PE=2 SV=2
          Length = 205

 Score =  267 bits (682), Expect = 3e-71
 Identities = 128/156 (82%), Positives = 137/156 (87%)
 Frame = +2

Query: 86  GQAVYKPQSELSSKVGNVGEARVSMRKTVSKSSDSPWYGPDRVKYLGPFSGEAPSYLKGE 265
           GQ + KPQ+EL  KVG  G  RVSMR+T+  + +S WYGPDR KYLGPFS + PSYL GE
Sbjct: 13  GQTLLKPQNELVRKVGGNG-GRVSMRRTIKSAPESIWYGPDRPKYLGPFSEQTPSYLTGE 71

Query: 266 FPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFK 445
           FPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PELLAKNGVKFGEAVWFK
Sbjct: 72  FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAKNGVKFGEAVWFK 131

Query: 446 AGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILM 553
           AGSQIF EGGLDYLGNP+LVHAQSILAIWACQV+LM
Sbjct: 132 AGSQIFQEGGLDYLGNPNLVHAQSILAIWACQVVLM 167


>sp|P14278|CB24_SOLLC Chlorophyll a-b binding protein 4,
           chloroplastic OS=Solanum lycopersicum GN=CAB4 PE=2 SV=1
          Length = 265

 Score =  266 bits (681), Expect = 4e-71
 Identities = 125/156 (80%), Positives = 137/156 (87%)
 Frame = +2

Query: 86  GQAVYKPQSELSSKVGNVGEARVSMRKTVSKSSDSPWYGPDRVKYLGPFSGEAPSYLKGE 265
           GQAV K Q+E   KVGN GE R++MR+TV  +  S WYG DR KYLGPFS + PSYL GE
Sbjct: 13  GQAVGKSQNEFIRKVGNFGEGRITMRRTVKSAPQSIWYGEDRPKYLGPFSEQTPSYLTGE 72

Query: 266 FPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFK 445
           FPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCV PE+L+KNGVKFGEAVWFK
Sbjct: 73  FPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVWFK 132

Query: 446 AGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILM 553
           AGSQIF+EGGLDYLGNP+LVHAQSILAIWACQV+LM
Sbjct: 133 AGSQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLM 168


>sp|P20866|CB2_PHYPA Chlorophyll a-b binding protein, chloroplastic
           OS=Physcomitrella patens PE=3 SV=1
          Length = 269

 Score =  266 bits (680), Expect = 5e-71
 Identities = 132/159 (83%), Positives = 146/159 (91%), Gaps = 3/159 (1%)
 Frame = +2

Query: 86  GQAVYKPQSELSSKV-GNVGEARVSMRKTVSKS--SDSPWYGPDRVKYLGPFSGEAPSYL 256
           GQ++ KP +ELS KV GNV EARV+MR+TVSKS  SD+ WYG DR K+LGPFSGE PSYL
Sbjct: 14  GQSLVKPVNELSRKVLGNV-EARVTMRRTVSKSAGSDTIWYGADRPKFLGPFSGETPSYL 72

Query: 257 KGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAV 436
            GEF GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGC+TPELLAK+GVKFGEAV
Sbjct: 73  NGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFGEAV 132

Query: 437 WFKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILM 553
           WFKAG+QIF+EGGLDYLGNPSLVHAQSILAIWACQV+LM
Sbjct: 133 WFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLM 171



 Score = 30.8 bits (68), Expect = 4.6
 Identities = 16/50 (32%), Positives = 26/50 (52%)
 Frame = +2

Query: 266 FPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNG 415
           +PG   +D  GL+ DP+TFA+ +  E+ + R AM    G     ++   G
Sbjct: 192 YPGG-SFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 240


>sp|P27493|CB22_TOBAC Chlorophyll a-b binding protein 21,
           chloroplastic OS=Nicotiana tabacum GN=CAB21 PE=2 SV=1
          Length = 265

 Score =  265 bits (678), Expect = 9e-71
 Identities = 127/140 (90%), Positives = 132/140 (94%), Gaps = 2/140 (1%)
 Frame = +2

Query: 140 GEARVSMRKTVSK--SSDSPWYGPDRVKYLGPFSGEAPSYLKGEFPGDYGWDTAGLSADP 313
           G  RVSMRKTV+K  +S SPWYGPDRVKYLGPFSGE+PSYL GEFPGDYGWDTAGLSADP
Sbjct: 29  GNGRVSMRKTVAKPVASSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADP 88

Query: 314 ETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAEGGLDYLGN 493
           ETFAKNRELEVIH RWAMLGALGCV PELLA+NGVKFGEAVWFKAGSQIF+EGGLDYLGN
Sbjct: 89  ETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGN 148

Query: 494 PSLVHAQSILAIWACQVILM 553
           PSLVHAQSILAIWACQVILM
Sbjct: 149 PSLVHAQSILAIWACQVILM 168


>sp|P27518|CB21_GOSHI Chlorophyll a-b binding protein 151,
           chloroplastic OS=Gossypium hirsutum GN=CAB-151 PE=2 SV=2
          Length = 265

 Score =  265 bits (676), Expect = 1e-70
 Identities = 124/156 (79%), Positives = 135/156 (86%)
 Frame = +2

Query: 86  GQAVYKPQSELSSKVGNVGEARVSMRKTVSKSSDSPWYGPDRVKYLGPFSGEAPSYLKGE 265
           GQ   K  +EL  K+G VG  RVSMR+TV  +  S WYGPDR KYLGPFS + PSYL GE
Sbjct: 13  GQTALKQSNELVCKIGAVGGGRVSMRRTVKSAPTSIWYGPDRPKYLGPFSDQIPSYLTGE 72

Query: 266 FPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFK 445
           FPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PE+L+KNGVKFGEAVWFK
Sbjct: 73  FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVWFK 132

Query: 446 AGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILM 553
           AGSQIF+EGGLDYLGNP+L+HAQSILAIWACQV+LM
Sbjct: 133 AGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLM 168


>sp|P12333|CB2A_SPIOL Chlorophyll a-b binding protein, chloroplastic
           OS=Spinacia oleracea PE=1 SV=1
          Length = 267

 Score =  264 bits (674), Expect = 2e-70
 Identities = 125/143 (87%), Positives = 131/143 (91%), Gaps = 4/143 (2%)
 Frame = +2

Query: 137 VGEARVSMRKTVSK----SSDSPWYGPDRVKYLGPFSGEAPSYLKGEFPGDYGWDTAGLS 304
           +GE R++MRKT  K     S SPWYGPDRVKYLGPFSGE+PSYL GEFPGDYGWDTAGLS
Sbjct: 28  IGEGRITMRKTAGKPKTVQSSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLS 87

Query: 305 ADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAEGGLDY 484
           ADPETFAKNRELEVIH RWAMLGALGCV PELLA+NGVKFGEAVWFKAGSQIF+EGGLDY
Sbjct: 88  ADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDY 147

Query: 485 LGNPSLVHAQSILAIWACQVILM 553
           LGNPSLVHAQSILAIWACQVILM
Sbjct: 148 LGNPSLVHAQSILAIWACQVILM 170


>sp|P07370|CB2B_SOLLC Chlorophyll a-b binding protein 1B,
           chloroplastic OS=Solanum lycopersicum GN=CAB1B PE=3 SV=1
          Length = 265

 Score =  263 bits (673), Expect = 3e-70
 Identities = 130/159 (81%), Positives = 139/159 (87%), Gaps = 3/159 (1%)
 Frame = +2

Query: 86  GQAVYKPQSELSSKVGNV-GEARVSMRKTVSKS--SDSPWYGPDRVKYLGPFSGEAPSYL 256
           GQAV     +LS     + G  R++MRK V+KS  S SPWYGPDRVKYLGPFSGE+PSYL
Sbjct: 15  GQAV-----KLSPSASEISGNGRITMRKAVAKSAPSSSPWYGPDRVKYLGPFSGESPSYL 69

Query: 257 KGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAV 436
            GEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PELLA+NGVKFGEAV
Sbjct: 70  TGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAV 129

Query: 437 WFKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILM 553
           WFKAGSQIF+EGGLDYLGNPSLVHAQSILAIWACQV+LM
Sbjct: 130 WFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLM 168


>sp|P27496|CB25_TOBAC Chlorophyll a-b binding protein 50,
           chloroplastic OS=Nicotiana tabacum GN=CAB50 PE=2 SV=1
          Length = 267

 Score =  263 bits (671), Expect = 6e-70
 Identities = 125/142 (88%), Positives = 132/142 (92%), Gaps = 4/142 (2%)
 Frame = +2

Query: 140 GEARVSMRKTVSK----SSDSPWYGPDRVKYLGPFSGEAPSYLKGEFPGDYGWDTAGLSA 307
           G  +V+MRKTV+K    SS SPWYGPDRVKYLGPFSGE+PSYL GEFPGDYGWDTAGLSA
Sbjct: 29  GNGKVTMRKTVTKAKPLSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSA 88

Query: 308 DPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAEGGLDYL 487
           DPETFAKNRELEVIH RWAMLGALGCV PELLA+NGVKFGEAVWFKAGSQIF+EGGLDYL
Sbjct: 89  DPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYL 148

Query: 488 GNPSLVHAQSILAIWACQVILM 553
           GNPSLVHAQSILAIWACQV+LM
Sbjct: 149 GNPSLVHAQSILAIWACQVVLM 170


>sp|P27492|CB21_TOBAC Chlorophyll a-b binding protein 16,
           chloroplastic OS=Nicotiana tabacum GN=CAB16 PE=2 SV=1
          Length = 266

 Score =  263 bits (671), Expect = 6e-70
 Identities = 129/152 (84%), Positives = 136/152 (89%), Gaps = 4/152 (2%)
 Frame = +2

Query: 110 SELSSKVGNVGEARVSMRKTVSK----SSDSPWYGPDRVKYLGPFSGEAPSYLKGEFPGD 277
           S  SS+V   G  +V+MRKT SK    SS SPWYGPDRVKYLGPFSGE+PSYL GEFPGD
Sbjct: 20  SPSSSEV--TGNGKVTMRKTASKAKPVSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGD 77

Query: 278 YGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQ 457
           YGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PELLA+NGVKFGEAVWFKAGSQ
Sbjct: 78  YGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQ 137

Query: 458 IFAEGGLDYLGNPSLVHAQSILAIWACQVILM 553
           IF+EGGLDYLGNPSLVHAQSILAIWACQV+LM
Sbjct: 138 IFSEGGLDYLGNPSLVHAQSILAIWACQVVLM 169
tr_hit_id A9RNP2
Definition tr|A9RNP2|A9RNP2_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 156
Score (bit) 278.0
E-value 1.0e-73
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK954334|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0020_C17, 5'
         (555 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9RNP2|A9RNP2_PHYPA Predicted protein OS=Physcomitrella paten...   278   1e-73
tr|Q9SXW8|Q9SXW8_PHYPA Chlorophyll a/b-binding protein OS=Physco...   274   2e-72
tr|A9T769|A9T769_PHYPA Predicted protein OS=Physcomitrella paten...   274   2e-72
tr|Q39768|Q39768_GINBI Light-harvesting chlorophyll a/b binding ...   273   3e-72
tr|A9RAS2|A9RAS2_PHYPA Predicted protein OS=Physcomitrella paten...   272   8e-72
tr|A9S6F4|A9S6F4_PHYPA Predicted protein OS=Physcomitrella paten...   272   1e-71
tr|A9RJS3|A9RJS3_PHYPA Predicted protein OS=Physcomitrella paten...   270   3e-71
tr|Q765P5|Q765P5_PHYPA Light-harvesting chlorophyll a/b-binding ...   269   6e-71
tr|A9RBQ3|A9RBQ3_PHYPA Predicted protein OS=Physcomitrella paten...   268   1e-70
tr|B4FNR1|B4FNR1_MAIZE Chlorophyll a-b binding protein 2 OS=Zea ...   268   2e-70
tr|O64445|O64445_NICSY Light harvesting chlorophyll a/b-binding ...   267   2e-70
tr|O04687|O04687_MESCR Chlorophyll a/b-binding protein OS=Mesemb...   267   3e-70
tr|A9TL35|A9TL35_PHYPA Predicted protein OS=Physcomitrella paten...   267   3e-70
tr|A7Q0V3|A7Q0V3_VITVI Chromosome chr7 scaffold_42, whole genome...   266   4e-70
tr|Q765P6|Q765P6_PHYPA Light-harvesting chlorophyll a/b-binding ...   266   5e-70
tr|Q40961|Q40961_PRUPE Light-harvesting chlorophyll a/b-binding ...   266   5e-70
tr|B6STN4|B6STN4_MAIZE Chlorophyll a-b binding protein 2 OS=Zea ...   266   5e-70
tr|A9RT62|A9RT62_PHYPA Predicted protein OS=Physcomitrella paten...   266   5e-70
tr|O64443|O64443_NICSY Light harvesting chlorophyll a/b-binding ...   266   7e-70
tr|A9RBQ5|A9RBQ5_PHYPA Predicted protein OS=Physcomitrella paten...   266   7e-70
tr|Q3LFQ5|Q3LFQ5_PANGI Chlorophyll a/b binding protein OS=Panax ...   265   2e-69
tr|A4F3R4|A4F3R4_SPIOL Major chlorophyll a/b binding protein LHC...   265   2e-69
tr|A4F3R3|A4F3R3_SPIOL Major chlorophyll a/b binding protein LHC...   265   2e-69
tr|O04686|O04686_MESCR Chlorophyll a/b-binding protein OS=Mesemb...   264   2e-69
tr|Q9M600|Q9M600_EUPES Chlorophyll a/b binding protein OS=Euphor...   264   3e-69
tr|O64444|O64444_NICSY Light harvesting chlorophyll a/b-binding ...   264   3e-69
tr|B3WFZ6|B3WFZ6_SPIOL Major chlorophyll a/b binding protein LHC...   264   3e-69
tr|Q41424|Q41424_SOLTU Chlorophyll a/b binding protein OS=Solanu...   263   4e-69
tr|Q41421|Q41421_SOLTU Chlorophyll a/b binding protein OS=Solanu...   263   4e-69
tr|O64442|O64442_NICSY Light harvesting chlorophyll a/b-binding ...   263   4e-69

>tr|A9RNP2|A9RNP2_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_176684 PE=4 SV=1
          Length = 265

 Score =  278 bits (712), Expect = 1e-73
 Identities = 136/156 (87%), Positives = 144/156 (92%)
 Frame = +2

Query: 86  GQAVYKPQSELSSKVGNVGEARVSMRKTVSKSSDSPWYGPDRVKYLGPFSGEAPSYLKGE 265
           GQ++ KP +ELS KVGNV EAR+SMRKT SKSSDS WYG DR KYLGPFSGE PSYL GE
Sbjct: 14  GQSLLKPVNELSRKVGNV-EARISMRKTASKSSDSIWYGADRPKYLGPFSGETPSYLNGE 72

Query: 266 FPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFK 445
           F GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFK
Sbjct: 73  FAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFK 132

Query: 446 AGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILM 553
           AG+QIF+EGGLDYLGNPSLVHAQSILAIWA QVILM
Sbjct: 133 AGAQIFSEGGLDYLGNPSLVHAQSILAIWASQVILM 168


>tr|Q9SXW8|Q9SXW8_PHYPA Chlorophyll a/b-binding protein
           OS=Physcomitrella patens PE=2 SV=1
          Length = 268

 Score =  274 bits (701), Expect = 2e-72
 Identities = 136/158 (86%), Positives = 145/158 (91%), Gaps = 2/158 (1%)
 Frame = +2

Query: 86  GQAVYKPQSELSSKVGNVGEARVSMRKTVSKSS--DSPWYGPDRVKYLGPFSGEAPSYLK 259
           GQA+ KP SELS KV N GEARV+MRKTVSKSS  DS WYG DR K+LGPFSGE PSYL 
Sbjct: 15  GQALLKPVSELSRKV-NAGEARVTMRKTVSKSSGSDSIWYGADRPKFLGPFSGETPSYLN 73

Query: 260 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 439
           GEF GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGC+TPELLAK+GVKFGEAVW
Sbjct: 74  GEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFGEAVW 133

Query: 440 FKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILM 553
           FKAG+QIF+EGGLDYLGNPSLVHAQSILAIWACQVILM
Sbjct: 134 FKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILM 171


>tr|A9T769|A9T769_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_219547 PE=4 SV=1
          Length = 268

 Score =  274 bits (701), Expect = 2e-72
 Identities = 136/158 (86%), Positives = 145/158 (91%), Gaps = 2/158 (1%)
 Frame = +2

Query: 86  GQAVYKPQSELSSKVGNVGEARVSMRKTVSKSS--DSPWYGPDRVKYLGPFSGEAPSYLK 259
           GQA+ KP SELS KV N GEARV+MRKTVSKSS  DS WYG DR K+LGPFSGE PSYL 
Sbjct: 15  GQALLKPVSELSRKV-NAGEARVTMRKTVSKSSGSDSIWYGADRPKFLGPFSGETPSYLN 73

Query: 260 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 439
           GEF GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGC+TPELLAK+GVKFGEAVW
Sbjct: 74  GEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFGEAVW 133

Query: 440 FKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILM 553
           FKAG+QIF+EGGLDYLGNPSLVHAQSILAIWACQVILM
Sbjct: 134 FKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILM 171


>tr|Q39768|Q39768_GINBI Light-harvesting chlorophyll a/b binding
           protein of photosystem II OS=Ginkgo biloba PE=2 SV=1
          Length = 270

 Score =  273 bits (699), Expect = 3e-72
 Identities = 135/161 (83%), Positives = 144/161 (89%), Gaps = 5/161 (3%)
 Frame = +2

Query: 86  GQAVYKPQSELSSKVGNV-GEARVSMRKTVSK----SSDSPWYGPDRVKYLGPFSGEAPS 250
           GQ V KPQ+E    VG V GE R++MRKT SK    SS SPWYGPDRVKYLGPFSGEAPS
Sbjct: 16  GQIVLKPQNEF---VGGVHGEGRITMRKTASKKVVASSGSPWYGPDRVKYLGPFSGEAPS 72

Query: 251 YLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGE 430
           YL GEFPGDYGWDTAGLSADPETFAKNRELEVIH+RWAMLGALGCV PELL++NGVKFGE
Sbjct: 73  YLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGE 132

Query: 431 AVWFKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILM 553
           AVWFKAGSQIF++GGLDYLGNPSL+HAQSILAIWACQVILM
Sbjct: 133 AVWFKAGSQIFSDGGLDYLGNPSLIHAQSILAIWACQVILM 173


>tr|A9RAS2|A9RAS2_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_155384 PE=4 SV=1
          Length = 267

 Score =  272 bits (696), Expect = 8e-72
 Identities = 134/158 (84%), Positives = 145/158 (91%), Gaps = 2/158 (1%)
 Frame = +2

Query: 86  GQAVYKPQSELSSKVGNVGEARVSMRKTVSKS--SDSPWYGPDRVKYLGPFSGEAPSYLK 259
           GQ V KP +ELS KVGNV EARV+MR+TVSKS  SDS WYG DR K+LGPFSGE PSYL 
Sbjct: 14  GQGVLKPVNELSRKVGNV-EARVTMRRTVSKSAGSDSIWYGADRPKFLGPFSGETPSYLT 72

Query: 260 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 439
           GEF GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGC+TPELLAK+GVKFGEAVW
Sbjct: 73  GEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFGEAVW 132

Query: 440 FKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILM 553
           FKAG+QIF+EGGLDYLGNPSLVHAQSILAIWACQV+LM
Sbjct: 133 FKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLM 170


>tr|A9S6F4|A9S6F4_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_124625 PE=4 SV=1
          Length = 267

 Score =  272 bits (695), Expect = 1e-71
 Identities = 133/158 (84%), Positives = 146/158 (92%), Gaps = 2/158 (1%)
 Frame = +2

Query: 86  GQAVYKPQSELSSKVGNVGEARVSMRKTVSKS--SDSPWYGPDRVKYLGPFSGEAPSYLK 259
           GQ++ KP +ELS KVGNV EARV+MR+TVSKS  SDS WYG DR K+LGPFSGE PSYL 
Sbjct: 14  GQSLVKPVNELSRKVGNV-EARVTMRRTVSKSAGSDSIWYGADRPKFLGPFSGETPSYLN 72

Query: 260 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 439
           GEF GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGC+TPELLAK+GVKFGEAVW
Sbjct: 73  GEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFGEAVW 132

Query: 440 FKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILM 553
           FKAG+QIF+EGGLDYLGNPSLVHAQSILAIWACQV+LM
Sbjct: 133 FKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLM 170


>tr|A9RJS3|A9RJS3_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_175594 PE=4 SV=1
          Length = 267

 Score =  270 bits (691), Expect = 3e-71
 Identities = 135/158 (85%), Positives = 144/158 (91%), Gaps = 2/158 (1%)
 Frame = +2

Query: 86  GQAVYKPQSELSSKVGNVGEARVSMRKTVSKS--SDSPWYGPDRVKYLGPFSGEAPSYLK 259
           GQ++ KP +ELS KVGNV EARVSMRK+ SKS  SDS WYG DR KYLGPFSGE PSYL 
Sbjct: 14  GQSLLKPVNELSRKVGNV-EARVSMRKSASKSAASDSIWYGADRPKYLGPFSGETPSYLN 72

Query: 260 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 439
           GEF GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGCVTPELLAK+GVKFGEAVW
Sbjct: 73  GEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCVTPELLAKSGVKFGEAVW 132

Query: 440 FKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILM 553
           FKAG+QIF+EGGLDYLGNPSLVHAQSILAIWA QVILM
Sbjct: 133 FKAGAQIFSEGGLDYLGNPSLVHAQSILAIWASQVILM 170


>tr|Q765P5|Q765P5_PHYPA Light-harvesting chlorophyll a/b-binding
           protein 2 (Predicted protein) OS=Physcomitrella patens
           subsp. patens GN=PpLhcb2 PE=4 SV=1
          Length = 267

 Score =  269 bits (688), Expect = 6e-71
 Identities = 132/158 (83%), Positives = 145/158 (91%), Gaps = 2/158 (1%)
 Frame = +2

Query: 86  GQAVYKPQSELSSKVGNVGEARVSMRKTVSKS--SDSPWYGPDRVKYLGPFSGEAPSYLK 259
           GQ++ KP +ELS KVG+  +ARV+MR+TV+KS  SDS WYG DR KYLGPFSGE PSYL 
Sbjct: 14  GQSLLKPVNELSRKVGS-SQARVTMRRTVNKSAGSDSIWYGADRPKYLGPFSGETPSYLN 72

Query: 260 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 439
           GEF GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGCVTPELLAK+GVKFGEAVW
Sbjct: 73  GEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCVTPELLAKSGVKFGEAVW 132

Query: 440 FKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILM 553
           FKAG+QIF+EGGLDYLGNPSLVHAQSILAIWACQVILM
Sbjct: 133 FKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILM 170


>tr|A9RBQ3|A9RBQ3_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_110819 PE=4 SV=1
          Length = 267

 Score =  268 bits (686), Expect = 1e-70
 Identities = 129/158 (81%), Positives = 147/158 (93%), Gaps = 2/158 (1%)
 Frame = +2

Query: 86  GQAVYKPQSELSSKVGNVGEARVSMRKTVSKS--SDSPWYGPDRVKYLGPFSGEAPSYLK 259
           GQ++++P +ELS KVGNV ++RV+MR+TV+KS  SDS WYG DR K+LGPFSGE PSYL 
Sbjct: 14  GQSLFQPVNELSRKVGNV-DSRVTMRRTVNKSAGSDSIWYGADRPKFLGPFSGETPSYLN 72

Query: 260 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 439
           GEF GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGC+TPELLAK+GVKFGEAVW
Sbjct: 73  GEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFGEAVW 132

Query: 440 FKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILM 553
           FKAG+QIF+EGGLDYLGNPSLVHAQSILAIWACQV+LM
Sbjct: 133 FKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLM 170


>tr|B4FNR1|B4FNR1_MAIZE Chlorophyll a-b binding protein 2 OS=Zea
           mays PE=2 SV=1
          Length = 262

 Score =  268 bits (684), Expect = 2e-70
 Identities = 126/147 (85%), Positives = 136/147 (92%), Gaps = 4/147 (2%)
 Frame = +2

Query: 125 KVGNVGEARVSMRKTVSK----SSDSPWYGPDRVKYLGPFSGEAPSYLKGEFPGDYGWDT 292
           KVG+ GE R++MRKTV K    +S SPWYGPDRVKYLGPFSGE PSYL GEFPGDYGWDT
Sbjct: 19  KVGSFGEGRITMRKTVGKPKVAASGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDT 78

Query: 293 AGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAEG 472
           AGLSADPETFAKNRELEVIH+RWAMLGALGCV PELL++NGVKFGEAVWFKAGSQIF+EG
Sbjct: 79  AGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEG 138

Query: 473 GLDYLGNPSLVHAQSILAIWACQVILM 553
           GLDYLGNPSL+HAQSILAIWACQV+LM
Sbjct: 139 GLDYLGNPSLIHAQSILAIWACQVVLM 165