DK954359 |
Clone id |
TST39A01NGRL0020_D18 |
Library |
TST39 |
Length |
595 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0020_D18. 5' end sequence. |
Accession |
DK954359 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL21Contig1 |
Sequence |
GCTTGTTCACAAGCACCGTCATACACACACATACAGGCCTCTAACACCCGCAGTGCAGGC CAGAGCTCCTCTGTCTTCTCCATCTCTCCTTTTTGAATCGTGCAGGAATGGCTAGCAATG GAGTTGTGACTGTCTATGGCAATGGTGCCATCTCTGATCCCAAGAAGTCATCTTATGCAG TCAAGGTGGGTCTTGCTCAGATGCTCCGAGGAGGTGTTATTATGGATGTTGTGAATGCAG AGCAGGCTCGAATTGCGGAAGAGGCAGGCGCTACTGCCGTAATGGCCCTCGAACGTGTGC CTGCGGACATCAGGGCTGAGGGTGGTGTGGCTCGCATGAGTGATCCTGGTTTGATCAAGG AGATCAAGAATGCTGTCACTATTCCTGTGATGGCCAAAGCCAGAATTGGGCATTTTGTGG AAGCGCAGGTACTTGAGGCCATTGGTGTGGATTACATTGATGAGAGTGAGGTCCTTACCC CAGCGGATGATGTGAACCACATCAACAAGCACAACTTTCGTATTCCTTTTGTTTGTGGCT GCCGCAACCTAGGTGAAGCTTTAAGAAGGATTGCAGAGGGGGCTGCAATGATCAG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9AT63 |
Definition |
sp|Q9AT63|PDX1_GINBI Probable pyridoxal biosynthesis protein PDX1 OS=Ginkgo biloba |
Align length |
162 |
Score (bit) |
297.0 |
E-value |
3.0e-80 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q45FF0 |
Definition |
tr|Q45FF0|Q45FF0_SOYBN Pyridoxine biosynthesis protein OS=Glycine max |
Align length |
161 |
Score (bit) |
276.0 |
E-value |
6.0e-73 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK954359|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0020_D18, 5' (595 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q45FF0|Q45FF0_SOYBN Pyridoxine biosynthesis protein OS=Glycin... 276 6e-73 tr|Q6QND3|Q6QND3_TOBAC Putative pyridoxine biosynthesis protein ... 275 1e-72 tr|Q45FF1|Q45FF1_LOTJA Pyridoxine biosynthesis protein OS=Lotus ... 274 3e-72 tr|A9TIQ8|A9TIQ8_PHYPA Predicted protein OS=Physcomitrella paten... 273 5e-72 tr|A9S7G3|A9S7G3_PHYPA Predicted protein OS=Physcomitrella paten... 270 3e-71 tr|Q45FF2|Q45FF2_MEDTR Pyridoxine biosynthesis protein OS=Medica... 268 2e-70 tr|B6SJQ3|B6SJQ3_MAIZE Putative uncharacterized protein OS=Zea m... 265 2e-69 tr|A9RLD0|A9RLD0_PHYPA Predicted protein OS=Physcomitrella paten... 264 2e-69 tr|A9TWQ5|A9TWQ5_PHYPA Predicted protein OS=Physcomitrella paten... 263 4e-69 tr|B4FRZ2|B4FRZ2_MAIZE Putative uncharacterized protein OS=Zea m... 262 9e-69 tr|B4FQA2|B4FQA2_MAIZE Putative uncharacterized protein OS=Zea m... 262 9e-69 tr|Q53NW9|Q53NW9_ORYSJ Os11g0708500 protein OS=Oryza sativa subs... 260 4e-68 tr|B7E5L2|B7E5L2_ORYSJ cDNA clone:006-203-B11, full insert seque... 259 1e-67 tr|A2YH94|A2YH94_ORYSI Putative uncharacterized protein OS=Oryza... 259 1e-67 tr|Q3S861|Q3S861_WHEAT Pyridoxine biosynthesis protein OS=Tritic... 257 4e-67 tr|B7E4V8|B7E4V8_ORYSJ cDNA clone:001-007-G11, full insert seque... 250 4e-65 tr|Q4WUD7|Q4WUD7_ASPFU Pyridoxine biosynthesis protein OS=Asperg... 249 8e-65 tr|B0Y3W1|B0Y3W1_ASPFC Pyridoxine biosynthesis protein OS=Asperg... 249 8e-65 tr|A1DF23|A1DF23_NEOFI Pyridoxine biosynthesis protein OS=Neosar... 249 8e-65 tr|A2QGS0|A2QGS0_ASPNC Contig An03c0120, complete genome OS=Aspe... 248 2e-64 tr|Q0CDB7|Q0CDB7_ASPTN Pyridoxine biosynthesis protein PDX1 OS=A... 246 5e-64 tr|Q2U7S1|Q2U7S1_ASPOR Stationary phase-induced protein OS=Asper... 246 7e-64 tr|B8NEJ0|B8NEJ0_ASPFL Pyridoxine biosynthesis protein OS=Asperg... 246 7e-64 tr|A6R037|A6R037_AJECN Pyridoxal biosynthesis lyase pdxS OS=Ajel... 245 2e-63 tr|A1CAP7|A1CAP7_ASPCL Pyridoxine biosynthesis protein OS=Asperg... 245 2e-63 tr|B8G663|B8G663_9CHLR Pyridoxine biosynthesis protein OS=Chloro... 244 3e-63 tr|B2QH76|B2QH76_9CHLR Pyridoxine biosynthesis protein OS=Chloro... 244 3e-63 tr|A4RTQ1|A4RTQ1_OSTLU Predicted protein OS=Ostreococcus lucimar... 243 5e-63 tr|B6HQD1|B6HQD1_PENCH Pc22g15930 protein OS=Penicillium chrysog... 243 8e-63 tr|Q1DU32|Q1DU32_COCIM Putative uncharacterized protein OS=Cocci... 241 3e-62
>tr|Q45FF0|Q45FF0_SOYBN Pyridoxine biosynthesis protein OS=Glycine max PE=2 SV=1 Length = 311
Score = 276 bits (706), Expect = 6e-73 Identities = 139/161 (86%), Positives = 151/161 (93%) Frame = +3
Query: 111 ASNGVVTVYGNGAISDPKKSSYAVKVGLAQMLRGGVIMDVVNAEQARIAEEAGATAVMAL 290 + +GVVTVYGNGAI++ KKS ++VKVGLAQMLRGGVIMDVV+AEQARIAEEAGA AVMAL Sbjct: 4 SGSGVVTVYGNGAITETKKSPFSVKVGLAQMLRGGVIMDVVDAEQARIAEEAGACAVMAL 63
Query: 291 ERVPADIRAEGGVARMSDPGLIKEIKNAVTIPVMAKARIGHFVEAQVLEAIGVDYIDESE 470 ERVPADIRA+GGVARMSDP LI +IK AVTIPVMAKARIGHFVEAQ+LEAIG+DY+DESE Sbjct: 64 ERVPADIRAQGGVARMSDPQLINDIKRAVTIPVMAKARIGHFVEAQILEAIGIDYVDESE 123
Query: 471 VLTPADDVNHINKHNFRIPFVCGCRNLGEALRRIAEGAAMI 593 VLT ADD NHINKHNFRIPFVCGCRNLGEALRRI EGAAMI Sbjct: 124 VLTLADDANHINKHNFRIPFVCGCRNLGEALRRIREGAAMI 164
>tr|Q6QND3|Q6QND3_TOBAC Putative pyridoxine biosynthesis protein isoform B (Putative pyridoxine biosynthesis protein isoform A) OS=Nicotiana tabacum GN=Pdx1-B PE=4 SV=1 Length = 309
Score = 275 bits (704), Expect = 1e-72 Identities = 141/163 (86%), Positives = 153/163 (93%), Gaps = 1/163 (0%) Frame = +3
Query: 108 MASNGVVTVYGNGAISDP-KKSSYAVKVGLAQMLRGGVIMDVVNAEQARIAEEAGATAVM 284 MA +GVVT+YGNGA+++ K+S ++VKVGLAQMLRGGVIMDVVNAEQARIAEEAGA AVM Sbjct: 1 MAGSGVVTLYGNGALTETTKQSPFSVKVGLAQMLRGGVIMDVVNAEQARIAEEAGACAVM 60
Query: 285 ALERVPADIRAEGGVARMSDPGLIKEIKNAVTIPVMAKARIGHFVEAQVLEAIGVDYIDE 464 ALERVPADIRA+GGVARMSDP LIKEIK AVTIPVMAKARIGHFVEAQ+LEAIG+DY+DE Sbjct: 61 ALERVPADIRAQGGVARMSDPQLIKEIKQAVTIPVMAKARIGHFVEAQILEAIGIDYVDE 120
Query: 465 SEVLTPADDVNHINKHNFRIPFVCGCRNLGEALRRIAEGAAMI 593 SEVLT ADD NHINKHNFRIPFVCGCRNLGEALRRI EGAAMI Sbjct: 121 SEVLTLADDENHINKHNFRIPFVCGCRNLGEALRRIREGAAMI 163
>tr|Q45FF1|Q45FF1_LOTJA Pyridoxine biosynthesis protein OS=Lotus japonicus PE=2 SV=1 Length = 310
Score = 274 bits (700), Expect = 3e-72 Identities = 141/163 (86%), Positives = 152/163 (93%), Gaps = 1/163 (0%) Frame = +3
Query: 108 MASNGVVTVYGNGA-ISDPKKSSYAVKVGLAQMLRGGVIMDVVNAEQARIAEEAGATAVM 284 M +GVVTVYGNGA I++ KKS ++VKVGLAQMLRGGVIMDVVNA+QARIAEEAGA AVM Sbjct: 1 MEGSGVVTVYGNGAAITETKKSPFSVKVGLAQMLRGGVIMDVVNAQQARIAEEAGACAVM 60
Query: 285 ALERVPADIRAEGGVARMSDPGLIKEIKNAVTIPVMAKARIGHFVEAQVLEAIGVDYIDE 464 ALERVPADIRA+GGVARMSDP LIKEIK AVTIPVMAKARIGHFVEAQ+LEAIGVDY+DE Sbjct: 61 ALERVPADIRAQGGVARMSDPQLIKEIKQAVTIPVMAKARIGHFVEAQILEAIGVDYVDE 120
Query: 465 SEVLTPADDVNHINKHNFRIPFVCGCRNLGEALRRIAEGAAMI 593 SEVLT AD+ NHINKHNFRIPFVCGCRNLGEALRR+ EGAAMI Sbjct: 121 SEVLTLADEDNHINKHNFRIPFVCGCRNLGEALRRVREGAAMI 163
>tr|A9TIQ8|A9TIQ8_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_170297 PE=4 SV=1 Length = 315
Score = 273 bits (698), Expect = 5e-72 Identities = 145/168 (86%), Positives = 153/168 (91%), Gaps = 6/168 (3%) Frame = +3
Query: 108 MASNGVVTVY---GNGAI--SDPKKS-SYAVKVGLAQMLRGGVIMDVVNAEQARIAEEAG 269 M NGVV +Y GNG + ++ KKS SYAVKVGLAQMLRGGVIMDVV+A QARIAEEAG Sbjct: 1 MEGNGVVAIYRNNGNGLLENNNSKKSVSYAVKVGLAQMLRGGVIMDVVDANQARIAEEAG 60
Query: 270 ATAVMALERVPADIRAEGGVARMSDPGLIKEIKNAVTIPVMAKARIGHFVEAQVLEAIGV 449 A AVMALERVPADIRAEGGVARMSDP +IKEIK AVTIPVMAKARIGHFVEAQ+LEAIGV Sbjct: 61 AVAVMALERVPADIRAEGGVARMSDPAMIKEIKKAVTIPVMAKARIGHFVEAQILEAIGV 120
Query: 450 DYIDESEVLTPADDVNHINKHNFRIPFVCGCRNLGEALRRIAEGAAMI 593 DYIDESEVLTPADDVNHINKHN+RIPFVCGCRNLGEALRRIAEGAAMI Sbjct: 121 DYIDESEVLTPADDVNHINKHNYRIPFVCGCRNLGEALRRIAEGAAMI 168
>tr|A9S7G3|A9S7G3_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_181982 PE=4 SV=1 Length = 314
Score = 270 bits (691), Expect = 3e-71 Identities = 142/167 (85%), Positives = 147/167 (88%), Gaps = 5/167 (2%) Frame = +3
Query: 108 MASNGVVTVYGNGAIS-----DPKKSSYAVKVGLAQMLRGGVIMDVVNAEQARIAEEAGA 272 M NGVV VY N + K SYAVKVGLAQMLRGGVIMDVV+A QARIAEEAGA Sbjct: 1 MEGNGVVAVYHNNGSGLSENQNKKTVSYAVKVGLAQMLRGGVIMDVVDAAQARIAEEAGA 60
Query: 273 TAVMALERVPADIRAEGGVARMSDPGLIKEIKNAVTIPVMAKARIGHFVEAQVLEAIGVD 452 AVMALERVPADIRAEGGVARMSDP +IKEIK AVTIPVMAKARIGHFVEAQ+LEAIGVD Sbjct: 61 VAVMALERVPADIRAEGGVARMSDPSMIKEIKKAVTIPVMAKARIGHFVEAQILEAIGVD 120
Query: 453 YIDESEVLTPADDVNHINKHNFRIPFVCGCRNLGEALRRIAEGAAMI 593 YIDESEVLTPADDVNHINKHN+RIPFVCGCRNLGEALRRIAEGAAMI Sbjct: 121 YIDESEVLTPADDVNHINKHNYRIPFVCGCRNLGEALRRIAEGAAMI 167
>tr|Q45FF2|Q45FF2_MEDTR Pyridoxine biosynthesis protein OS=Medicago truncatula PE=2 SV=1 Length = 314
Score = 268 bits (685), Expect = 2e-70 Identities = 138/167 (82%), Positives = 151/167 (90%), Gaps = 5/167 (2%) Frame = +3
Query: 108 MASNGVVTVYGNGAISDP-----KKSSYAVKVGLAQMLRGGVIMDVVNAEQARIAEEAGA 272 M +GVVTVYGNGA+++ K S ++VKVGLAQMLRGGVIMDVVNAEQARIAEEAGA Sbjct: 1 MEGSGVVTVYGNGALTETTSTTTKSSPFSVKVGLAQMLRGGVIMDVVNAEQARIAEEAGA 60
Query: 273 TAVMALERVPADIRAEGGVARMSDPGLIKEIKNAVTIPVMAKARIGHFVEAQVLEAIGVD 452 AVMALERVPADIRA+GGVARMSDP LIKEIK AVTIPVMAKARIGHFVEAQ+LE++G+D Sbjct: 61 CAVMALERVPADIRAQGGVARMSDPQLIKEIKAAVTIPVMAKARIGHFVEAQILESLGID 120
Query: 453 YIDESEVLTPADDVNHINKHNFRIPFVCGCRNLGEALRRIAEGAAMI 593 Y+DESEVLT AD+ NHINKHNFRIPFVCGCRNLGEALRRI EGAAMI Sbjct: 121 YVDESEVLTLADEDNHINKHNFRIPFVCGCRNLGEALRRIREGAAMI 167
>tr|B6SJQ3|B6SJQ3_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 317
Score = 265 bits (676), Expect = 2e-69 Identities = 132/165 (80%), Positives = 148/165 (89%), Gaps = 6/165 (3%) Frame = +3
Query: 117 NGVVTVYGNGAIS------DPKKSSYAVKVGLAQMLRGGVIMDVVNAEQARIAEEAGATA 278 +GVVTVYGN + PK S+++VKVGLAQMLRGGVIMDVV EQAR+AEEAGA A Sbjct: 6 SGVVTVYGNNGAALLEPPKQPKSSTFSVKVGLAQMLRGGVIMDVVTPEQARLAEEAGACA 65
Query: 279 VMALERVPADIRAEGGVARMSDPGLIKEIKNAVTIPVMAKARIGHFVEAQVLEAIGVDYI 458 VMALERVPADIRA+GGVARMSDPGLI++IK AVTIPVMAKARIGHFVEAQ+LEA+GVDY+ Sbjct: 66 VMALERVPADIRAQGGVARMSDPGLIRDIKRAVTIPVMAKARIGHFVEAQILEAVGVDYV 125
Query: 459 DESEVLTPADDVNHINKHNFRIPFVCGCRNLGEALRRIAEGAAMI 593 DESEVLTPADD +HINKHNFR+PFVCGCR+LGEALRR+ EGAAMI Sbjct: 126 DESEVLTPADDAHHINKHNFRVPFVCGCRDLGEALRRVREGAAMI 170
>tr|A9RLD0|A9RLD0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_176118 PE=4 SV=1 Length = 313
Score = 264 bits (675), Expect = 2e-69 Identities = 139/166 (83%), Positives = 146/166 (87%), Gaps = 4/166 (2%) Frame = +3
Query: 108 MASNGVVTVYGNGA----ISDPKKSSYAVKVGLAQMLRGGVIMDVVNAEQARIAEEAGAT 275 M N VV V NG+ + K SYAVKVGLAQMLRGGVIMDVV+ QARIAEEAGA Sbjct: 1 MEENRVVAVLNNGSGLSENQNKKTVSYAVKVGLAQMLRGGVIMDVVDVAQARIAEEAGAV 60
Query: 276 AVMALERVPADIRAEGGVARMSDPGLIKEIKNAVTIPVMAKARIGHFVEAQVLEAIGVDY 455 AVMALERVPADIRAEGGVARMSDP +IKEIK AVTIPVMAKARIGHFVEAQ+LEAIGVDY Sbjct: 61 AVMALERVPADIRAEGGVARMSDPSMIKEIKKAVTIPVMAKARIGHFVEAQILEAIGVDY 120
Query: 456 IDESEVLTPADDVNHINKHNFRIPFVCGCRNLGEALRRIAEGAAMI 593 IDESEVLTPADDV+HINKHN+RIPFVCGCRNLGEALRRIAEGAAMI Sbjct: 121 IDESEVLTPADDVHHINKHNYRIPFVCGCRNLGEALRRIAEGAAMI 166
>tr|A9TWQ5|A9TWQ5_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_226199 PE=4 SV=1 Length = 315
Score = 263 bits (673), Expect = 4e-69 Identities = 141/168 (83%), Positives = 148/168 (88%), Gaps = 6/168 (3%) Frame = +3
Query: 108 MASNGVVTVY-----GNGAISDPKKSSYAVKVGLAQMLRGGVIMDVVNAEQARIAEEAGA 272 M +GVV VY G ++ K SYAVKVGLAQMLRGGVIMDVV+A QARIAEEAGA Sbjct: 1 MEGDGVVAVYCDNGKGLSENNNKKTVSYAVKVGLAQMLRGGVIMDVVDANQARIAEEAGA 60
Query: 273 TAVMALERVPADIRAEGGVARMSDPGLIKEIKNAVTIPVMAKARI-GHFVEAQVLEAIGV 449 AVMALERVPADIRAEGGVARMSDP +IKEIK AVTIPVMAKARI GHFVEAQ+LEAIGV Sbjct: 61 VAVMALERVPADIRAEGGVARMSDPSMIKEIKKAVTIPVMAKARIAGHFVEAQILEAIGV 120
Query: 450 DYIDESEVLTPADDVNHINKHNFRIPFVCGCRNLGEALRRIAEGAAMI 593 DYIDESEVLTPADDVNHINKHN+RIPFVCGCRNLGEALRRIAEGAAMI Sbjct: 121 DYIDESEVLTPADDVNHINKHNYRIPFVCGCRNLGEALRRIAEGAAMI 168
>tr|B4FRZ2|B4FRZ2_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 317
Score = 262 bits (670), Expect = 9e-69 Identities = 133/165 (80%), Positives = 149/165 (90%), Gaps = 6/165 (3%) Frame = +3
Query: 117 NGVVTVYG-NGA-----ISDPKKSSYAVKVGLAQMLRGGVIMDVVNAEQARIAEEAGATA 278 +GVVTVYG NGA PK ++++VKVGLAQMLRGGVIMDVV EQAR+AEEAGA A Sbjct: 6 SGVVTVYGSNGAELLEPSKQPKSATFSVKVGLAQMLRGGVIMDVVTPEQARLAEEAGACA 65
Query: 279 VMALERVPADIRAEGGVARMSDPGLIKEIKNAVTIPVMAKARIGHFVEAQVLEAIGVDYI 458 VMALERVPADIRA+GGVARMSDPGLI++IK AVTIPVMAKARIGHFVEAQ+LEA+GVDY+ Sbjct: 66 VMALERVPADIRAQGGVARMSDPGLIRDIKRAVTIPVMAKARIGHFVEAQILEAVGVDYV 125
Query: 459 DESEVLTPADDVNHINKHNFRIPFVCGCRNLGEALRRIAEGAAMI 593 DESEVLTPADD +HINKHNFR+PFVCGCR+LGEALRR+ EGAAMI Sbjct: 126 DESEVLTPADDAHHINKHNFRVPFVCGCRDLGEALRRVREGAAMI 170
|