DK954397 |
Clone id |
TST39A01NGRL0020_F08 |
Library |
TST39 |
Length |
663 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0020_F08. 5' end sequence. |
Accession |
DK954397 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL240Contig1 |
Sequence |
AGAAAACCTGAAGAGCTGTGTGTACTGAATAGTATTGACCCCTCTCAAATACTATCTGAT TATCAAAACTATGGATTAGACATCCGAGTTTTTGTGTATGTCACCTCTTCATCTCCCGAT GATTTTAATCAAAATATTAGAGGACTTATAGACAATAAGGAAGTTCTTGATCTTACTACA TTTGAGGGAGTTTCATATAACCCATCAAATCACACTTCAAGGGAGATTTTTTTCTCAACA AGTGGTCCAACTCCCCAAACCATATCAAGCATAAGCCCAAGGGGCTCACCAATGTGGGTT GGAACCATAATACTTGCATCAATTGTAGGATTTTATGTACTTTGGGGCCTCTCCAATGTG TTCCTTGTAAAGCAATATGATGCATATTTTACAAACTATAGTAGAACACATGTGGTTGTA GCTTGTATGATATTGGGAACAACCATATTTGGAGGAATACCTACAATGATTTGGTGGTTA AAACTGAAATTACATCGCAAGTCAAAGTCATATGCCCGGTCAACAAGTAAAGTGGGTATT TTGAATAGCTCTCCAAGCATGTCTGAAGAGGATCTCAACCAGCTTCCAAAAGATGCAGAG AATGCAAATTATCAACGAGGTTCACCATGGAAATGGGACCATTCAACTTGCTTGTAGACC ACA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P18547 |
Definition |
sp|P18547|VNCS_PAVPN Non-capsid protein NS-1 OS=Porcine parvovirus (strain NADL-2) |
Align length |
58 |
Score (bit) |
34.3 |
E-value |
0.61 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q2HST1 |
Definition |
tr|Q2HST1|Q2HST1_MEDTR Ferric reductase-like transmembrane component OS=Medicago truncatula |
Align length |
196 |
Score (bit) |
50.4 |
E-value |
0.0001 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK954397|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0020_F08, 5' (663 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q2HST1|Q2HST1_MEDTR Ferric reductase-like transmembrane compo... 50 1e-04 tr|A5C425|A5C425_VITVI Putative uncharacterized protein OS=Vitis... 48 6e-04 tr|Q7XUW2|Q7XUW2_ORYSJ OSJNBa0027P08.6 protein OS=Oryza sativa s... 47 8e-04 tr|Q6L8G3|Q6L8G3_ORYSJ Ferric reductase OS=Oryza sativa subsp. j... 47 8e-04 tr|Q0JCX7|Q0JCX7_ORYSJ Os04g0444800 protein OS=Oryza sativa subs... 47 8e-04 tr|B8AUC6|B8AUC6_ORYSI Putative uncharacterized protein OS=Oryza... 47 8e-04 tr|A3AU74|A3AU74_ORYSJ Putative uncharacterized protein OS=Oryza... 47 8e-04 tr|A7R0A2|A7R0A2_VITVI Chromosome undetermined scaffold_301, who... 46 0.002 tr|Q9LTA0|Q9LTA0_ARATH FRO2-like protein; NADPH oxidase-like OS=... 45 0.004 tr|Q8RWS6|Q8RWS6_ARATH Putative FRO2; NADPH oxidase OS=Arabidops... 45 0.004 tr|Q0WLX7|Q0WLX7_ARATH FRO2-like protein (Fragment) OS=Arabidops... 45 0.004 tr|Q9LT99|Q9LT99_ARATH FRO1-like protein; NADPH oxidase-like OS=... 43 0.015 tr|Q3KTM0|Q3KTM0_ARATH FRO1-like protein OS=Arabidopsis thaliana... 43 0.015 tr|B8A3B5|B8A3B5_MAIZE Putative uncharacterized protein OS=Zea m... 43 0.015 tr|B6SW74|B6SW74_MAIZE Ferric reductase-like transmembrane compo... 43 0.015 tr|A9U5F8|A9U5F8_PHYPA Ferric reductase-like transmembrane compo... 42 0.026 tr|B5VYV0|B5VYV0_SPIMA Putative uncharacterized protein OS=Arthr... 37 1.4 tr|A9S0A4|A9S0A4_PHYPA Ferric reductase like transmembrane compo... 36 1.9 tr|B5A1X1|B5A1X1_9VIRU Non-structural protein 2 OS=Porcine parvo... 36 2.5 tr|B5A1X0|B5A1X0_9VIRU Non-structural protein 1 OS=Porcine parvo... 36 2.5 tr|B5A1W9|B5A1W9_9VIRU Non-structural protein 3 OS=Porcine parvo... 36 2.5 tr|B8G3H2|B8G3H2_9CHLR Anti-sigma-factor antagonist OS=Chlorofle... 36 2.5 tr|Q8UUR7|Q8UUR7_DANRE Lamina-associted protein 2 OS=Danio rerio... 35 4.2 tr|Q8UUR5|Q8UUR5_DANRE Lamina-associted protein 2 beta OS=Danio ... 35 4.2 tr|Q8UUR4|Q8UUR4_DANRE Lamina-associted protein 2 gamma OS=Danio... 35 4.2 tr|Q7ZTV0|Q7ZTV0_DANRE Thymopoietin OS=Danio rerio GN=tmpo PE=2 ... 35 4.2 tr|Q5RGX5|Q5RGX5_DANRE Thymopoietin OS=Danio rerio GN=tmpo PE=2 ... 35 4.2 tr|Q5RGX4|Q5RGX4_DANRE Thymopoietin OS=Danio rerio GN=tmpo PE=2 ... 35 4.2 tr|Q5RGX2|Q5RGX2_DANRE Thymopoietin OS=Danio rerio GN=tmpo PE=2 ... 35 4.2 tr|B7HW20|B7HW20_BACCE ABC transporter; permease OS=Bacillus cer... 35 4.2
>tr|Q2HST1|Q2HST1_MEDTR Ferric reductase-like transmembrane component OS=Medicago truncatula GN=MtrDRAFT_AC151000g1v2 PE=4 SV=1 Length = 740
Score = 50.4 bits (119), Expect = 1e-04 Identities = 48/196 (24%), Positives = 82/196 (41%), Gaps = 2/196 (1%) Frame = +1
Query: 1 RKPEELCVLNSIDPSQILSDYQNYGLDIRVFVYVTSSSPDDFNQNIRGLIDNKEVLDLTT 180 +K EL +L+++D I + + ++I V ++VT S D Sbjct: 500 KKSNELPLLSTVDMETICPCFSDK-VNINVHIFVTRES------------------DPPL 540
Query: 181 FEGVSYNPSNHTSREIFFSTSGPTPQTISSISPRGSPMWVGTIILASIVGFYVLWGLSNV 360 EG +Y P P+ +S + G+ W G +++S +GF +L L N+ Sbjct: 541 EEGYNYKPIKSLC-----PFPMPSDYGMSGLVGTGNNFWSGLYVISSTLGFVILLALLNI 595
Query: 361 FLVKQYDAYFTNYSRTHVVVACMILGTTIFGGIPTMIW--WLKLKLHRKSKSYARSTSKV 534 + + Y + ++V CM+ IFGGI W W K + K KS + KV Sbjct: 596 YYINPVGVVIWWY-KGLLLVVCMVASVVIFGGIVVGFWNMWEK-QSSLKDKS---NNIKV 650
Query: 535 GILNSSPSMSEEDLNQ 582 + + S+ +DL Q Sbjct: 651 DKIEQNGSVDHKDLTQ 666
>tr|A5C425|A5C425_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_035329 PE=4 SV=1 Length = 694
Score = 47.8 bits (112), Expect = 6e-04 Identities = 38/195 (19%), Positives = 81/195 (41%), Gaps = 1/195 (0%) Frame = +1
Query: 1 RKPEELCVLNSIDPSQILSDYQNYGLDIRVFVYVTSSSPDDFNQNIRGLIDNKEVLDLTT 180 +K EL +L+++D I + + ++I + +YVT S + N V + + Sbjct: 493 KKSNELSLLSTVDMESICPSFSDK-VNIEIQIYVTRESEPPLEEGKINKTVNSSVFPVLS 551
Query: 181 FEGVSYNPSNHTSREIFFSTSGPTPQTISSISPRGSPMWVGTIILASIVGFYVLWGLSNV 360 G+S + G+ +W G ++ ++GF + L N+ Sbjct: 552 GXGLSV------------------------LVGTGNNIWSGIYVILPVLGFVLFMDLLNI 587
Query: 361 FLVKQYDAYFTNYSRTHVVVACMILGTTIFGGIPTMIWWLKLKLHRKSKSYARSTSKVGI 540 + + + Y + V CM+ IFGG W L + +S+ + + K+G+ Sbjct: 588 YYINPFGINAWWYKGL-LFVLCMVASVVIFGGAVVXFWHLWERRISESEEFEDNQMKIGM 646
Query: 541 L-NSSPSMSEEDLNQ 582 + + + SM +++ +Q Sbjct: 647 VQHINGSMEDKESSQ 661
>tr|Q7XUW2|Q7XUW2_ORYSJ OSJNBa0027P08.6 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0027P08.6 PE=4 SV=2 Length = 753
Score = 47.4 bits (111), Expect = 8e-04 Identities = 40/193 (20%), Positives = 78/193 (40%) Frame = +1
Query: 1 RKPEELCVLNSIDPSQILSDYQNYGLDIRVFVYVTSSSPDDFNQNIRGLIDNKEVLDLTT 180 +K EL +L+++D +Q +S + L + + +VT S + I G D+++ + Sbjct: 498 KKSNELSLLSAVD-AQFISSSVSDKLHLDIQAFVTQESQPPLEEGIVG--DDQKATGMFV 554
Query: 181 FEGVSYNPSNHTSREIFFSTSGPTPQTISSISPRGSPMWVGTIILASIVGFYVLWGLSNV 360 G T+S + G+ W G AS +GF + + L+ Sbjct: 555 KNGT----------------------TMSGLVGTGNNFWAGMYFAASTLGFVLAYALAQA 592
Query: 361 FLVKQYDAYFTNYSRTHVVVACMILGTTIFGGIPTMIWWLKLKLHRKSKSYARSTSKVGI 540 + V++ + F + V V CM G + GG+ ++W L K + + + + V Sbjct: 593 YYVRRLNV-FAWWHLGLVFVLCMAAGVALPGGLVVLLWHLSEKRKAEDDRWDAAAAAVPR 651
Query: 541 LNSSPSMSEEDLN 579 +E+ N Sbjct: 652 AQDGEEEAEQTTN 664
>tr|Q6L8G3|Q6L8G3_ORYSJ Ferric reductase OS=Oryza sativa subsp. japonica GN=0sFRO1 PE=2 SV=1 Length = 758
Score = 47.4 bits (111), Expect = 8e-04 Identities = 40/193 (20%), Positives = 78/193 (40%) Frame = +1
Query: 1 RKPEELCVLNSIDPSQILSDYQNYGLDIRVFVYVTSSSPDDFNQNIRGLIDNKEVLDLTT 180 +K EL +L+++D +Q +S + L + + +VT S + I G D+++ + Sbjct: 503 KKSNELSLLSAVD-AQFISSSVSDKLHLDIQAFVTQESQPPLEEGIVG--DDQKATGMFV 559
Query: 181 FEGVSYNPSNHTSREIFFSTSGPTPQTISSISPRGSPMWVGTIILASIVGFYVLWGLSNV 360 G T+S + G+ W G AS +GF + + L+ Sbjct: 560 KNGT----------------------TMSGLVGTGNNFWAGMYFAASTLGFVLAYALAQA 597
Query: 361 FLVKQYDAYFTNYSRTHVVVACMILGTTIFGGIPTMIWWLKLKLHRKSKSYARSTSKVGI 540 + V++ + F + V V CM G + GG+ ++W L K + + + + V Sbjct: 598 YYVRRLNV-FAWWHLGLVFVLCMAAGVALPGGLVVLLWHLSEKRKAEDDRWDAAATAVPR 656
Query: 541 LNSSPSMSEEDLN 579 +E+ N Sbjct: 657 AQDGEEEAEQTTN 669
>tr|Q0JCX7|Q0JCX7_ORYSJ Os04g0444800 protein OS=Oryza sativa subsp. japonica GN=Os04g0444800 PE=2 SV=1 Length = 758
Score = 47.4 bits (111), Expect = 8e-04 Identities = 40/193 (20%), Positives = 78/193 (40%) Frame = +1
Query: 1 RKPEELCVLNSIDPSQILSDYQNYGLDIRVFVYVTSSSPDDFNQNIRGLIDNKEVLDLTT 180 +K EL +L+++D +Q +S + L + + +VT S + I G D+++ + Sbjct: 503 KKSNELSLLSAVD-AQFISSSVSDKLHLDIQAFVTQESQPPLEEGIVG--DDQKATGMFV 559
Query: 181 FEGVSYNPSNHTSREIFFSTSGPTPQTISSISPRGSPMWVGTIILASIVGFYVLWGLSNV 360 G T+S + G+ W G AS +GF + + L+ Sbjct: 560 KNGT----------------------TMSGLVGTGNNFWAGMYFAASTLGFVLAYALAQA 597
Query: 361 FLVKQYDAYFTNYSRTHVVVACMILGTTIFGGIPTMIWWLKLKLHRKSKSYARSTSKVGI 540 + V++ + F + V V CM G + GG+ ++W L K + + + + V Sbjct: 598 YYVRRLNV-FAWWHLGLVFVLCMAAGVALPGGLVVLLWHLSEKRKAEDDRWDAAAAAVPR 656
Query: 541 LNSSPSMSEEDLN 579 +E+ N Sbjct: 657 AQDGEEEAEQTTN 669
>tr|B8AUC6|B8AUC6_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_16048 PE=4 SV=1 Length = 758
Score = 47.4 bits (111), Expect = 8e-04 Identities = 40/193 (20%), Positives = 78/193 (40%) Frame = +1
Query: 1 RKPEELCVLNSIDPSQILSDYQNYGLDIRVFVYVTSSSPDDFNQNIRGLIDNKEVLDLTT 180 +K EL +L+++D +Q +S + L + + +VT S + I G D+++ + Sbjct: 503 KKSNELSLLSAVD-AQFISSSVSDKLHLDIQAFVTQESQPPLEEGIVG--DDQKATGMFV 559
Query: 181 FEGVSYNPSNHTSREIFFSTSGPTPQTISSISPRGSPMWVGTIILASIVGFYVLWGLSNV 360 G T+S + G+ W G AS +GF + + L+ Sbjct: 560 KNGT----------------------TMSGLVGTGNNFWAGMYFAASTLGFVLAYALAQA 597
Query: 361 FLVKQYDAYFTNYSRTHVVVACMILGTTIFGGIPTMIWWLKLKLHRKSKSYARSTSKVGI 540 + V++ + F + V V CM G + GG+ ++W L K + + + + V Sbjct: 598 YYVRRLNV-FAWWHLGLVFVLCMAAGVALPGGLVVLLWHLSEKRKAEDDRWDAAAAAVPR 656
Query: 541 LNSSPSMSEEDLN 579 +E+ N Sbjct: 657 AQDGEEEAEQTTN 669
>tr|A3AU74|A3AU74_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_014346 PE=4 SV=1 Length = 678
Score = 47.4 bits (111), Expect = 8e-04 Identities = 40/193 (20%), Positives = 78/193 (40%) Frame = +1
Query: 1 RKPEELCVLNSIDPSQILSDYQNYGLDIRVFVYVTSSSPDDFNQNIRGLIDNKEVLDLTT 180 +K EL +L+++D +Q +S + L + + +VT S + I G D+++ + Sbjct: 498 KKSNELSLLSAVD-AQFISSSVSDKLHLDIQAFVTQESQPPLEEGIVG--DDQKATGMFV 554
Query: 181 FEGVSYNPSNHTSREIFFSTSGPTPQTISSISPRGSPMWVGTIILASIVGFYVLWGLSNV 360 G T+S + G+ W G AS +GF + + L+ Sbjct: 555 KNGT----------------------TMSGLVGTGNNFWAGMYFAASTLGFVLAYALAQA 592
Query: 361 FLVKQYDAYFTNYSRTHVVVACMILGTTIFGGIPTMIWWLKLKLHRKSKSYARSTSKVGI 540 + V++ + F + V V CM G + GG+ ++W L K + + + + V Sbjct: 593 YYVRRLNV-FAWWHLGLVFVLCMAAGVALPGGLVVLLWHLSEKRKAEDDRWDAAAAAVPR 651
Query: 541 LNSSPSMSEEDLN 579 +E+ N Sbjct: 652 AQDGEEEAEQTTN 664
>tr|A7R0A2|A7R0A2_VITVI Chromosome undetermined scaffold_301, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00011355001 PE=4 SV=1 Length = 735
Score = 45.8 bits (107), Expect = 0.002 Identities = 38/195 (19%), Positives = 80/195 (41%), Gaps = 1/195 (0%) Frame = +1
Query: 1 RKPEELCVLNSIDPSQILSDYQNYGLDIRVFVYVTSSSPDDFNQNIRGLIDNKEVLDLTT 180 +K EL +L+++D I + + ++I + +YVT S + N V + + Sbjct: 493 KKSNELSLLSTVDMESICPSFSDK-VNIEIQIYVTRESEPPLEEGKINKTVNSSVFPVLS 551
Query: 181 FEGVSYNPSNHTSREIFFSTSGPTPQTISSISPRGSPMWVGTIILASIVGFYVLWGLSNV 360 G+S + G+ +W G ++ ++GF + L N+ Sbjct: 552 GRGLSV------------------------LVGTGNNIWSGIYVILPVLGFVLFMDLLNI 587
Query: 361 FLVKQYDAYFTNYSRTHVVVACMILGTTIFGGIPTMIWWLKLKLHRKSKSYARSTSKVGI 540 + + + Y + V CM+ IFGG W L + +S+ + K+G+ Sbjct: 588 YYINPFGINSWWYKGL-LFVLCMVASVVIFGGAVVGFWHLWERRISESEELEDNQMKIGM 646
Query: 541 L-NSSPSMSEEDLNQ 582 + + + SM +++ +Q Sbjct: 647 VQHINGSMEDKESSQ 661
>tr|Q9LTA0|Q9LTA0_ARATH FRO2-like protein; NADPH oxidase-like OS=Arabidopsis thaliana PE=4 SV=1 Length = 721
Score = 45.1 bits (105), Expect = 0.004 Identities = 44/206 (21%), Positives = 82/206 (39%), Gaps = 5/206 (2%) Frame = +1
Query: 1 RKPEELCVLNSIDPSQILSDYQNYGLDIRVFVYVTSSSPDDFNQNIRGLIDNKEVLDLTT 180 + +EL +L++ID I + L++ + +Y+T S + + Sbjct: 476 KNSDELSLLSAIDIPSICPFFSKK-LNLEIHIYITRQSEPRLEDGM---------VHKVV 525
Query: 181 FEGVSYNPSNHTSREIFFSTSGPTPQTISSISPRGSPMWVGTIILASIVGFYVLWGLSNV 360 V +N S + T G +W G ++ S +GF + L ++ Sbjct: 526 HPSVKLPRTNGCSMSVLVGT--------------GDNIWSGLYLIISTIGFISMITLLDI 571
Query: 361 FLVKQYDAYFTNYSRTHVVVACMILGTTIFGGIPTMIW--WLKLKLHRKSKSYARSTSKV 534 F +K+Y+ T + + + V CM+ IFGG+ + W W H+ + A KV Sbjct: 572 FYIKRYN-ITTWWYKGLLFVGCMVASVLIFGGLVVVFWHRW----EHKTGEVEANGNDKV 626
Query: 535 ---GILNSSPSMSEEDLNQLPKDAEN 603 G +PS +E + +D +N Sbjct: 627 DLNGEETHNPSAAELKGLAIEEDVQN 652
>tr|Q8RWS6|Q8RWS6_ARATH Putative FRO2; NADPH oxidase OS=Arabidopsis thaliana GN=At5g49730 PE=2 SV=1 Length = 738
Score = 45.1 bits (105), Expect = 0.004 Identities = 44/206 (21%), Positives = 82/206 (39%), Gaps = 5/206 (2%) Frame = +1
Query: 1 RKPEELCVLNSIDPSQILSDYQNYGLDIRVFVYVTSSSPDDFNQNIRGLIDNKEVLDLTT 180 + +EL +L++ID I + L++ + +Y+T S + + Sbjct: 493 KNSDELSLLSAIDIPSICPFFSKK-LNLEIHIYITRQSEPRLEDGM---------VHKVV 542
Query: 181 FEGVSYNPSNHTSREIFFSTSGPTPQTISSISPRGSPMWVGTIILASIVGFYVLWGLSNV 360 V +N S + T G +W G ++ S +GF + L ++ Sbjct: 543 HPSVKLPRTNGCSMSVLVGT--------------GDNIWSGLYLIISTIGFISMITLLDI 588
Query: 361 FLVKQYDAYFTNYSRTHVVVACMILGTTIFGGIPTMIW--WLKLKLHRKSKSYARSTSKV 534 F +K+Y+ T + + + V CM+ IFGG+ + W W H+ + A KV Sbjct: 589 FYIKRYN-ITTWWYKGLLFVGCMVASVLIFGGLVVVFWHRW----EHKTGEVEANGNDKV 643
Query: 535 ---GILNSSPSMSEEDLNQLPKDAEN 603 G +PS +E + +D +N Sbjct: 644 DLNGEETHNPSAAELKGLAIEEDVQN 669
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