DK954400 |
Clone id |
TST39A01NGRL0020_F11 |
Library |
TST39 |
Length |
647 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0020_F11. 5' end sequence. |
Accession |
DK954400 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL233Contig1 |
Sequence |
CTTCTCTGCGTGGGCGGAGCTTCGAGCAACTGAACGAAGGGCTTTGCTTAAGCGGAATTT CCCTCTTAGGGCTACCGGTCAAAAGCTTCAGGCAGCTCAGACGCTCCTTGAGAAGGAGAT GCTGCAGATTCTGTTGTAGGTGTGTTCTCTTCACTCCGGTGAAGTGAAGACCGGTGATAT GTACAAAGATAGGGGTGATGGGCGTGGTGGAAGCCGTGAATCTATCGATGCTAAGAAGCG CATTGAGGAGACTCTAGAGAGGACATCTCCTTCGACATCCAAGGGAAATGCAAGGGAAAA AGATCGTGTTTCTATGGTGCCTGCATCAACTGGTAGACGCCTAGGCTCTGTTGACTTAAG GCCTACATTTGACAAGACCAAGTATGCAGACGATGGCGAAGAATCAGAGACTGACAGCGA AGAATCGGATGTTAGTGGATCAGATGGTGACGACACTTCTTGGGTTTCTTGGTTTTGCGG TTTGAGAGGGAATGAGTTCTTTTGTGAGGTGGACGACGAGTACATTCAGGATGATTTCAA TTTAAGTGGACTAAGCAGCCAGGTCCCTTATTATGAGTATGCACTGGATTTGATTCTGGA TGCAGAGTCTCCGAATGTTGACATGTTAACTGATGAGCAGAATGAGA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P40228 |
Definition |
sp|P40228|CSK2B_ARATH Casein kinase II subunit beta OS=Arabidopsis thaliana |
Align length |
153 |
Score (bit) |
107.0 |
E-value |
4.0e-23 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9T768 |
Definition |
tr|A9T768|A9T768_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
146 |
Score (bit) |
149.0 |
E-value |
2.0e-34 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK954400|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0020_F11, 5' (647 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9T768|A9T768_PHYPA Predicted protein OS=Physcomitrella paten... 149 2e-34 tr|A9T5Q0|A9T5Q0_PHYPA Predicted protein OS=Physcomitrella paten... 132 2e-29 tr|B8LPQ3|B8LPQ3_PICSI Putative uncharacterized protein OS=Picea... 122 2e-26 tr|A9RL84|A9RL84_PHYPA Predicted protein OS=Physcomitrella paten... 119 2e-25 tr|A7PK61|A7PK61_VITVI Chromosome chr15 scaffold_19, whole genom... 117 8e-25 tr|A9PJM8|A9PJM8_POPJC Putative uncharacterized protein OS=Popul... 114 5e-24 tr|Q9FQF8|Q9FQF8_MAIZE Protein kinase CK2 regulatory subunit CK2... 113 1e-23 tr|B6T9Z0|B6T9Z0_MAIZE Casein kinase II subunit beta-4 OS=Zea ma... 112 2e-23 tr|Q9AY38|Q9AY38_ORYSA Putative casein kinase II beta subunit OS... 112 3e-23 tr|Q336R5|Q336R5_ORYSJ Casein kinase II beta-4 subunit, putative... 112 3e-23 tr|Q0KKA4|Q0KKA4_HORVU Casein kinase II beta OS=Hordeum vulgare ... 112 3e-23 tr|B8BIA2|B8BIA2_ORYSI Putative uncharacterized protein OS=Oryza... 112 3e-23 tr|A9S7H2|A9S7H2_PHYPA Predicted protein OS=Physcomitrella paten... 111 3e-23 tr|Q7XC26|Q7XC26_ORYSJ Casein kinase II beta-4 subunit, putative... 110 6e-23 tr|Q336R6|Q336R6_ORYSJ Os10g0564900 protein OS=Oryza sativa subs... 110 6e-23 tr|Q2V308|Q2V308_ARATH Uncharacterized protein At5g47080.3 OS=Ar... 108 2e-22 tr|Q8LPD2|Q8LPD2_TOBAC Protein kinase Ck2 regulatory subunit 2 O... 108 4e-22 tr|Q3E8F5|Q3E8F5_ARATH Uncharacterized protein At5g47080.2 OS=Ar... 107 5e-22 tr|Q9FQF7|Q9FQF7_MAIZE Protein kinase CK2 regulatory subunit CK2... 107 6e-22 tr|B6SQ06|B6SQ06_MAIZE Casein kinase II subunit beta-4 OS=Zea ma... 107 6e-22 tr|B4FN07|B4FN07_MAIZE Putative uncharacterized protein OS=Zea m... 107 6e-22 tr|A5BGR6|A5BGR6_VITVI Putative uncharacterized protein OS=Vitis... 104 4e-21 tr|Q9FQF6|Q9FQF6_MAIZE Protein kinase CK2 regulatory subunit CK2... 103 7e-21 tr|Q84VF5|Q84VF5_ORYSJ Possible protein kinase CK2 regulatory su... 103 7e-21 tr|Q84RS4|Q84RS4_ORYSJ Os07g0495100 protein OS=Oryza sativa subs... 103 7e-21 tr|B8B6D0|B8B6D0_ORYSI Putative uncharacterized protein OS=Oryza... 103 7e-21 tr|B6TNU8|B6TNU8_MAIZE Casein kinase II subunit beta-4 OS=Zea ma... 103 7e-21 tr|B6TIH0|B6TIH0_MAIZE Casein kinase II subunit beta-4 OS=Zea ma... 103 7e-21 tr|B6TGH2|B6TGH2_MAIZE Casein kinase II subunit beta-4 OS=Zea ma... 103 7e-21 tr|B4G0Y3|B4G0Y3_MAIZE Putative uncharacterized protein OS=Zea m... 103 7e-21
>tr|A9T768|A9T768_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_59578 PE=4 SV=1 Length = 298
Score = 149 bits (375), Expect = 2e-34 Identities = 79/146 (54%), Positives = 95/146 (65%), Gaps = 2/146 (1%) Frame = +2
Query: 215 RESIDAKKRIEETLERTSPSTSKGN-AREKDRVSMVPAST-GRRLGSVDLRPTFDKTKYA 388 R+ D KKR+E+ ++++SPSTS+G REKDR++ A+T RR + RPT +K KY Sbjct: 26 RDVTDNKKRLEDGIDKSSPSTSRGGIGREKDRIAAPAATTQSRRNAGHETRPTMEKAKYP 85
Query: 389 XXXXXXXXXXXXXXXXXXXXXXXXXXXXFCGLRGNEFFCEVDDEYIQDDFNLSGLSSQVP 568 FC LRGNEFFCEVDDEYIQDDFNLSGLSSQVP Sbjct: 86 EDAEDSESESEDSDVSASDGEDTSWISWFCSLRGNEFFCEVDDEYIQDDFNLSGLSSQVP 145
Query: 569 YYEYALDLILDAESPNVDMLTDEQNE 646 YY+YALDLILD ESP+ DMLT+EQNE Sbjct: 146 YYDYALDLILDVESPSDDMLTEEQNE 171
>tr|A9T5Q0|A9T5Q0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_219176 PE=4 SV=1 Length = 299
Score = 132 bits (332), Expect = 2e-29 Identities = 78/149 (52%), Positives = 90/149 (60%), Gaps = 5/149 (3%) Frame = +2
Query: 215 RESIDAKKRIEETLERTSP-STSKGN-AREKDRVSMVPASTGR-RLGSVDLRPTFDKTKY 385 R+ D KKR E + P STSKG REKDR++ + T R +++ RPT +K KY Sbjct: 24 RDVTDNKKRFEGGIPLLQPPSTSKGLIGREKDRIAAAASKTQTSRNAALEARPTLEKAKY 83
Query: 386 AXXXXXXXXXXXXXXXXXXXXXXXXXXXX--FCGLRGNEFFCEVDDEYIQDDFNLSGLSS 559 FCGLRGNEFFCEVDDEYIQDDFNLSGLSS Sbjct: 84 PEDVAAEDSESESEDSDVSASDGEDTSWISWFCGLRGNEFFCEVDDEYIQDDFNLSGLSS 143
Query: 560 QVPYYEYALDLILDAESPNVDMLTDEQNE 646 QVPYY+YALDLILD ESP+ DMLT+EQNE Sbjct: 144 QVPYYDYALDLILDVESPSDDMLTEEQNE 172
>tr|B8LPQ3|B8LPQ3_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 297
Score = 122 bits (306), Expect = 2e-26 Identities = 73/145 (50%), Positives = 82/145 (56%), Gaps = 7/145 (4%) Frame = +2
Query: 233 KKRIEETL------ERTSPSTSKGNAREKDRVSMVPASTGRRL-GSVDLRPTFDKTKYAX 391 +KRI + L E++ PSTSKG R+S+ S GRR G DKT YA Sbjct: 29 RKRINDALDKHLHLEKSPPSTSKGL---NGRLSIPSTSAGRRAPGDSRNASALDKTNYAE 85
Query: 392 XXXXXXXXXXXXXXXXXXXXXXXXXXXFCGLRGNEFFCEVDDEYIQDDFNLSGLSSQVPY 571 FC LRGNEFFCEVDDEYIQDDFNL GLSSQVPY Sbjct: 86 DVEDSDTDSEESDVSGSDGDDTSWISWFCNLRGNEFFCEVDDEYIQDDFNLCGLSSQVPY 145
Query: 572 YEYALDLILDAESPNVDMLTDEQNE 646 Y+YALDLILD ES N D+LT+EQNE Sbjct: 146 YDYALDLILDVESSNDDILTEEQNE 170
>tr|A9RL84|A9RL84_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_116155 PE=4 SV=1 Length = 249
Score = 119 bits (297), Expect = 2e-25 Identities = 67/138 (48%), Positives = 88/138 (63%), Gaps = 1/138 (0%) Frame = +2
Query: 236 KRIEETLERTSPSTSKG-NAREKDRVSMVPASTGRRLGSVDLRPTFDKTKYAXXXXXXXX 412 KR+++ +E++S STSKG +EKDR++ A+T + L + DL +++ + Sbjct: 2 KRLDDGIEKSSASTSKGWIGKEKDRLAPAAAAT-QILVAEDLESESEESDVSGSDGEDTA 60
Query: 413 XXXXXXXXXXXXXXXXXXXXFCGLRGNEFFCEVDDEYIQDDFNLSGLSSQVPYYEYALDL 592 FCGLRGNEFFCE+DDEYIQDDFNLSGL SQVPYY+YALDL Sbjct: 61 WISW----------------FCGLRGNEFFCEIDDEYIQDDFNLSGLRSQVPYYDYALDL 104
Query: 593 ILDAESPNVDMLTDEQNE 646 ILD E P+ D+LT+EQNE Sbjct: 105 ILDVEPPSDDILTEEQNE 122
>tr|A7PK61|A7PK61_VITVI Chromosome chr15 scaffold_19, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00019032001 PE=4 SV=1 Length = 288
Score = 117 bits (292), Expect = 8e-25 Identities = 67/138 (48%), Positives = 85/138 (61%), Gaps = 3/138 (2%) Frame = +2
Query: 242 IEETLERTSPSTSKG-NAREKDRVSMVPASTGRRLGSVDLRPTFDKT--KYAXXXXXXXX 412 +++ LE++SPSTSKG ++++K+R+S+ S G+ +D R T + K Sbjct: 28 LDKHLEKSSPSTSKGLSSKDKERLSVPSTSAGK--SQLDHRDTRAASLPKNKCSDEESET 85
Query: 413 XXXXXXXXXXXXXXXXXXXXFCGLRGNEFFCEVDDEYIQDDFNLSGLSSQVPYYEYALDL 592 FC LRGNEFFCEVDDEYIQDDFNL GLSSQVPYY+YALDL Sbjct: 86 DSEESDVSGSDGDDTSWISWFCNLRGNEFFCEVDDEYIQDDFNLCGLSSQVPYYDYALDL 145
Query: 593 ILDAESPNVDMLTDEQNE 646 ILD ES + DM T+EQNE Sbjct: 146 ILDVESSHGDMFTEEQNE 163
>tr|A9PJM8|A9PJM8_POPJC Putative uncharacterized protein OS=Populus jackii PE=2 SV=1 Length = 330
Score = 114 bits (285), Expect = 5e-24 Identities = 67/147 (45%), Positives = 85/147 (57%), Gaps = 12/147 (8%) Frame = +2
Query: 242 IEETLERTSPSTSKG---NAREKDRVSMVPASTGRRLGS---------VDLRPTFDKTKY 385 +++ LE++SPSTS+G ++++K+R+S+ STG+ L D R +K Sbjct: 31 LDKHLEKSSPSTSRGLNNSSKDKERLSVPSTSTGKSLQHHQQQLDHHRADSRSA-SLSKN 89
Query: 386 AXXXXXXXXXXXXXXXXXXXXXXXXXXXXFCGLRGNEFFCEVDDEYIQDDFNLSGLSSQV 565 FC LRGNEFFCEVDDEYIQDDFNL GLSSQV Sbjct: 90 KCSDEESETDSEESDVSGSDGDDTSWISWFCNLRGNEFFCEVDDEYIQDDFNLCGLSSQV 149
Query: 566 PYYEYALDLILDAESPNVDMLTDEQNE 646 PYY+YALDLILD ES + DM T+EQNE Sbjct: 150 PYYDYALDLILDVESSHGDMFTEEQNE 176
>tr|Q9FQF8|Q9FQF8_MAIZE Protein kinase CK2 regulatory subunit CK2B1 (Putative uncharacterized protein) OS=Zea mays PE=2 SV=1 Length = 276
Score = 113 bits (282), Expect = 1e-23 Identities = 66/140 (47%), Positives = 80/140 (57%), Gaps = 2/140 (1%) Frame = +2
Query: 233 KKRIEETLERTSPSTSKG--NAREKDRVSMVPASTGRRLGSVDLRPTFDKTKYAXXXXXX 406 +KRI E ++R+SPSTS G REK+R+ + R G + K A Sbjct: 16 RKRIGEPMDRSSPSTSWGFSGGREKERIGVGKQPEMPRSGGGSTAMSKSKLSDAESETDS 75
Query: 407 XXXXXXXXXXXXXXXXXXXXXXFCGLRGNEFFCEVDDEYIQDDFNLSGLSSQVPYYEYAL 586 FC L+GNEFFCEVDD+YIQDDFNL GLS+QVPYY+YAL Sbjct: 76 EESDVSGSDGEDTSWISW----FCSLKGNEFFCEVDDDYIQDDFNLCGLSNQVPYYDYAL 131
Query: 587 DLILDAESPNVDMLTDEQNE 646 DLILD ES + DMLT+EQNE Sbjct: 132 DLILDVESSHGDMLTEEQNE 151
>tr|B6T9Z0|B6T9Z0_MAIZE Casein kinase II subunit beta-4 OS=Zea mays PE=2 SV=1 Length = 275
Score = 112 bits (280), Expect = 2e-23 Identities = 66/140 (47%), Positives = 81/140 (57%), Gaps = 2/140 (1%) Frame = +2
Query: 233 KKRIEETLERTSPSTSKG--NAREKDRVSMVPASTGRRLGSVDLRPTFDKTKYAXXXXXX 406 +KRI E ++R+SPSTS G REK+R+ + R G K+K + Sbjct: 16 RKRIGEPMDRSSPSTSWGFSGGREKERIGVGKQPEMPRSGGGST--AMSKSKLSDESETD 73
Query: 407 XXXXXXXXXXXXXXXXXXXXXXFCGLRGNEFFCEVDDEYIQDDFNLSGLSSQVPYYEYAL 586 FC L+GNEFFCEVDD+YIQDDFNL GLS+QVPYY+YAL Sbjct: 74 SEESDVSGSDGEDTSWISW---FCSLKGNEFFCEVDDDYIQDDFNLCGLSNQVPYYDYAL 130
Query: 587 DLILDAESPNVDMLTDEQNE 646 DLILD ES + DMLT+EQNE Sbjct: 131 DLILDVESSHGDMLTEEQNE 150
>tr|Q9AY38|Q9AY38_ORYSA Putative casein kinase II beta subunit OS=Oryza sativa GN=OSJNBa0027P10.8 PE=4 SV=1 Length = 280
Score = 112 bits (279), Expect = 3e-23 Identities = 64/138 (46%), Positives = 81/138 (58%) Frame = +2
Query: 233 KKRIEETLERTSPSTSKGNAREKDRVSMVPASTGRRLGSVDLRPTFDKTKYAXXXXXXXX 412 K +E+ L+R+SPSTS+G A K+R + A+ G +L + P K + Sbjct: 23 KDVLEKHLDRSSPSTSRGAAVAKERDRL--AAAGGKLPA----PLGKAGKVSDGAEEFET 76
Query: 413 XXXXXXXXXXXXXXXXXXXXFCGLRGNEFFCEVDDEYIQDDFNLSGLSSQVPYYEYALDL 592 FC LRGNEFFCE+DD+YIQDDFNL GLS+QVPYY+YALDL Sbjct: 77 DSEDSDVSGSEGEDTSWISWFCSLRGNEFFCEIDDDYIQDDFNLCGLSNQVPYYDYALDL 136
Query: 593 ILDAESPNVDMLTDEQNE 646 ILD ES N D+ T+EQNE Sbjct: 137 ILDIESSNGDVFTEEQNE 154
>tr|Q336R5|Q336R5_ORYSJ Casein kinase II beta-4 subunit, putative, expressed OS=Oryza sativa subsp. japonica GN=LOC_Os10g41520 PE=4 SV=2 Length = 280
Score = 112 bits (279), Expect = 3e-23 Identities = 64/138 (46%), Positives = 81/138 (58%) Frame = +2
Query: 233 KKRIEETLERTSPSTSKGNAREKDRVSMVPASTGRRLGSVDLRPTFDKTKYAXXXXXXXX 412 K +E+ L+R+SPSTS+G A K+R + A+ G +L + P K + Sbjct: 23 KDVLEKHLDRSSPSTSRGAAVAKERDRL--AAAGGKLPA----PLGKAGKVSDGAEEFET 76
Query: 413 XXXXXXXXXXXXXXXXXXXXFCGLRGNEFFCEVDDEYIQDDFNLSGLSSQVPYYEYALDL 592 FC LRGNEFFCE+DD+YIQDDFNL GLS+QVPYY+YALDL Sbjct: 77 DSEDSDVSGSEGEDTSWISWFCSLRGNEFFCEIDDDYIQDDFNLCGLSNQVPYYDYALDL 136
Query: 593 ILDAESPNVDMLTDEQNE 646 ILD ES N D+ T+EQNE Sbjct: 137 ILDIESSNGDVFTEEQNE 154
|