DK954402 |
Clone id |
TST39A01NGRL0020_F13 |
Library |
TST39 |
Length |
624 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0020_F13. 5' end sequence. |
Accession |
DK954402 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL2245Contig1 |
Sequence |
CAGAGGCAACAGCAAGATGACATCAACAAAAGGCAAAAGATGCATTGGATGCTGAGTATT TCTGGACCGATCCTTTACCTTGTTCTCCAAGCAGCCTGCCAAAGTATGAAGCGTCTCACG AGTTTCAAACCAAAAGAAAGCGACAGCAACAGAGGCAACAGCAAGATGACATCAACAAAA GGCAAAAGACACAACATCCGCAACCACCACATGGACGTTTGCCTCCACCACAGCAAAATA TATCAGGGCATATGCCTTTAAGGCCCGGACCTAGTCAGCCTGTACATAACCCTGCACCTC TCCCTGCTGCTGCAGCCCATCACTATGGTGGAGGACAAAGGGCACCAGGGGGCCCTCAAA CAAGATATCCGCAGCCAGGTCGCCCACCTCATGGAGGTCCAAGAGGAGGTTATAATCAAA GTCGCAGTGGGCAAGGTAGCAGTGGCTATGGTCCAGCACAGGCCAGTGGCTACGCCCCAC CAGCAGGTGTTGGCCAAGGATCACGAGGTAGTAATTATCCCAGTGGTAATACCAACTATG CTCAGGGGAACTCATATTCTAATGTTAGTGGAGGGAGAGGTCCAAATGCGAGCGGAACAG GTCGTGCGCAGCAATATGGGACGT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q5JK68 |
Definition |
sp|Q5JK68|CDKC2_ORYSJ Cyclin-dependent kinase C-2 OS=Oryza sativa subsp. japonica |
Align length |
207 |
Score (bit) |
94.7 |
E-value |
3.0e-19 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9NXN0 |
Definition |
tr|A9NXN0|A9NXN0_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
195 |
Score (bit) |
114.0 |
E-value |
6.0e-24 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK954402|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0020_F13, 5' (624 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9NXN0|A9NXN0_PICSI Putative uncharacterized protein OS=Picea... 114 6e-24 tr|B7ZX40|B7ZX40_MAIZE Putative uncharacterized protein OS=Zea m... 100 5e-20 tr|B6U109|B6U109_MAIZE Serine/threonine-protein kinase bur1 OS=Z... 100 5e-20 tr|B4F9F3|B4F9F3_MAIZE Putative uncharacterized protein OS=Zea m... 100 5e-20 tr|A7PG30|A7PG30_VITVI Chromosome chr6 scaffold_15, whole genome... 100 5e-20 tr|B8A9I9|B8A9I9_ORYSI Putative uncharacterized protein OS=Oryza... 95 4e-18 tr|A3A1P7|A3A1P7_ORYSJ Putative uncharacterized protein OS=Oryza... 95 4e-18 tr|A7R655|A7R655_VITVI Chromosome undetermined scaffold_1171, wh... 89 2e-16 tr|Q8GU42|Q8GU42_PHYPA Putative cyclin dependent kinase OS=Physc... 85 4e-15 tr|A9TI36|A9TI36_PHYPA Predicted protein OS=Physcomitrella paten... 85 4e-15 tr|P93320|P93320_MEDSA Cdc2MsC protein OS=Medicago sativa GN=cdc... 82 2e-14 tr|A9RDY5|A9RDY5_PHYPA Predicted protein OS=Physcomitrella paten... 80 7e-14 tr|Q4ABP4|Q4ABP4_BRARP 80A08_23 OS=Brassica rapa subsp. pekinens... 80 1e-13 tr|B7EMQ2|B7EMQ2_ORYSJ cDNA clone:J033067D07, full insert sequen... 77 6e-13 tr|A3B3N5|A3B3N5_ORYSJ Putative uncharacterized protein OS=Oryza... 77 6e-13 tr|A5BRE2|A5BRE2_VITVI Putative uncharacterized protein OS=Vitis... 77 1e-12 tr|A9SUV3|A9SUV3_PHYPA Predicted protein OS=Physcomitrella paten... 71 6e-11 tr|Q93X47|Q93X47_SOLLC Cyclin dependent kinase C OS=Solanum lyco... 70 8e-11 tr|B8P454|B8P454_9APHY Predicted protein (Fragment) OS=Postia pl... 56 2e-06 tr|A8P5Q9|A8P5Q9_COPC7 Putative uncharacterized protein OS=Copri... 53 2e-05 tr|A4RRK6|A4RRK6_OSTLU Predicted protein (Fragment) OS=Ostreococ... 48 4e-04 tr|Q556Z2|Q556Z2_DICDI Putative uncharacterized protein (Putativ... 48 5e-04 tr|Q5SCB9|Q5SCB9_OSTTA Cell cycle dependent kinase C OS=Ostreoco... 46 0.002 tr|Q01G13|Q01G13_OSTTA Cyclin dependent kinase type-C (IC) OS=Os... 46 0.002 tr|Q9LSM7|Q9LSM7_ARATH Cyclin-dependent protein kinase-like OS=A... 43 0.013 tr|Q8GZA7|Q8GZA7_ARATH Putative cyclin-dependent protein kinase ... 43 0.013 tr|A7PPZ9|A7PPZ9_VITVI Chromosome chr18 scaffold_24, whole genom... 43 0.013 tr|A5B7W9|A5B7W9_VITVI Putative uncharacterized protein OS=Vitis... 43 0.013 tr|A7P1N5|A7P1N5_VITVI Chromosome chr19 scaffold_4, whole genome... 43 0.017 tr|Q4P4L3|Q4P4L3_USTMA Putative uncharacterized protein OS=Ustil... 43 0.017
>tr|A9NXN0|A9NXN0_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 575
Score = 114 bits (284), Expect = 6e-24 Identities = 68/195 (34%), Positives = 79/195 (40%), Gaps = 1/195 (0%) Frame = +3
Query: 33 AKDALDAEYFWTDPLPCSPSSLPKYEASHEFXXXXXXXXXXXXXXXXXXXXXTXXXXXXX 212 AKDALDAEYFWTDP+PC+PSSLP+YE SH+F + Sbjct: 315 AKDALDAEYFWTDPVPCAPSSLPRYEPSHDFQTKRKRQQQRQHDEMTKRQKISQQHPQQQ 374
Query: 213 XXXXXXXXNI-SGHMPLRPGPSQPVHNXXXXXXXXXHHYGGGQRAPGGPQTRYXXXXXXX 389 H+PLRPGP+ P+HN HYGGG R GG Q R+ Sbjct: 375 HVRLPPIQTAGQAHLPLRPGPNPPMHNPPPQFPVGPSHYGGGPRGAGG-QNRH---PQNI 430
Query: 390 XXXXXXXXXXXXXXXXXXXXXPAQASGYAPPAGVGQGSRGSNYPSGNTNYAQGNSYSNVS 569 Q GYAP QG RG + Y+QG Y Sbjct: 431 RPLHAAQGGGYNANRGYGGPPQQQGGGYAPHGMGNQGPRGGQFGGRGAGYSQGGPYGGPV 490
Query: 570 GGRGPNASGTGRAQQ 614 GGRGPN G R Q Sbjct: 491 GGRGPNVGGGNRGLQ 505
>tr|B7ZX40|B7ZX40_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 287
Score = 100 bits (250), Expect = 5e-20 Identities = 73/200 (36%), Positives = 78/200 (39%), Gaps = 4/200 (2%) Frame = +3
Query: 33 AKDALDAEYFWTDPLPCSPSSLPKYEASHEFXXXXXXXXXXXXXXXXXXXXXTXXXXXXX 212 AKDALDAEYFWTDPLPC P SLPKYEASHEF Sbjct: 93 AKDALDAEYFWTDPLPCDPKSLPKYEASHEFQTKKKRQQQRQAEEAAKRQKLNHPPPHSR 152
Query: 213 XXXXXXXXNISGHMPLRPGPSQPVHNXXXXXXXXXHHYGGGQRAPGGPQTRYXXXXXXXX 392 H +RPG Q +HN HHY R PGGP RY Sbjct: 153 LPPLQQPG--QAHPQMRPG--QGMHNVPPVAAGPGHHY-AKPRGPGGP-NRY--PQGGNQ 204
Query: 393 XXXXXXXXXXXXXXXXXXXXPAQASGYAPPAGVG-QGSRGSNYPSGNTNYAQGNSYSNVS 569 P Q G P G +GS GS Y +G NY QG Y Sbjct: 205 GGGYNPNRGGQGGGYGSGPYPQQGRGPPYPGAAGPRGSGGSGYGAGGPNYQQGGPYGTSG 264
Query: 570 GGRGPN---ASGTGRAQQYG 620 GRGPN SG+ QQYG Sbjct: 265 PGRGPNYSQGSGSRNQQQYG 284
>tr|B6U109|B6U109_MAIZE Serine/threonine-protein kinase bur1 OS=Zea mays PE=2 SV=1 Length = 510
Score = 100 bits (250), Expect = 5e-20 Identities = 73/200 (36%), Positives = 78/200 (39%), Gaps = 4/200 (2%) Frame = +3
Query: 33 AKDALDAEYFWTDPLPCSPSSLPKYEASHEFXXXXXXXXXXXXXXXXXXXXXTXXXXXXX 212 AKDALDAEYFWTDPLPC P SLPKYEASHEF Sbjct: 316 AKDALDAEYFWTDPLPCDPKSLPKYEASHEFQTKKKRQQQRQAEEAAKRQKLNHPPPHSR 375
Query: 213 XXXXXXXXNISGHMPLRPGPSQPVHNXXXXXXXXXHHYGGGQRAPGGPQTRYXXXXXXXX 392 H +RPG Q +HN HHY R PGGP RY Sbjct: 376 LPPLQQPG--QAHPQMRPG--QGMHNVPPVAAGPGHHY-AKPRGPGGP-NRY--PQGGNQ 427
Query: 393 XXXXXXXXXXXXXXXXXXXXPAQASGYAPPAGVG-QGSRGSNYPSGNTNYAQGNSYSNVS 569 P Q G P G +GS GS Y +G NY QG Y Sbjct: 428 GGGYNPNRGGQGGGYGSGPYPQQGRGPPYPGAAGPRGSGGSGYGAGGPNYQQGGPYGTSG 487
Query: 570 GGRGPN---ASGTGRAQQYG 620 GRGPN SG+ QQYG Sbjct: 488 PGRGPNYSQGSGSRNQQQYG 507
>tr|B4F9F3|B4F9F3_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 510
Score = 100 bits (250), Expect = 5e-20 Identities = 73/200 (36%), Positives = 78/200 (39%), Gaps = 4/200 (2%) Frame = +3
Query: 33 AKDALDAEYFWTDPLPCSPSSLPKYEASHEFXXXXXXXXXXXXXXXXXXXXXTXXXXXXX 212 AKDALDAEYFWTDPLPC P SLPKYEASHEF Sbjct: 316 AKDALDAEYFWTDPLPCDPKSLPKYEASHEFQTKKKRQQQRQAEEAAKRQKLNHPPPHSR 375
Query: 213 XXXXXXXXNISGHMPLRPGPSQPVHNXXXXXXXXXHHYGGGQRAPGGPQTRYXXXXXXXX 392 H +RPG Q +HN HHY R PGGP RY Sbjct: 376 LPPLQQPG--QAHPQMRPG--QGMHNVPPVAAGPGHHY-AKPRGPGGP-NRY--PQGGNQ 427
Query: 393 XXXXXXXXXXXXXXXXXXXXPAQASGYAPPAGVG-QGSRGSNYPSGNTNYAQGNSYSNVS 569 P Q G P G +GS GS Y +G NY QG Y Sbjct: 428 GGGYNPNRGGQGGGYGSGPYPQQGRGPPYPGAAGPRGSGGSGYGAGGPNYQQGGPYGTSG 487
Query: 570 GGRGPN---ASGTGRAQQYG 620 GRGPN SG+ QQYG Sbjct: 488 PGRGPNYSQGSGSRNQQQYG 507
>tr|A7PG30|A7PG30_VITVI Chromosome chr6 scaffold_15, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00017353001 PE=4 SV=1 Length = 398
Score = 100 bits (250), Expect = 5e-20 Identities = 69/202 (34%), Positives = 76/202 (37%), Gaps = 6/202 (2%) Frame = +3
Query: 33 AKDALDAEYFWTDPLPCSPSSLPKYEASHEFXXXXXXXXXXXXXXXXXXXXXTXXXXXXX 212 AKDALDAEYFWTDPLPC P SLPKYE+SHEF Sbjct: 196 AKDALDAEYFWTDPLPCDPKSLPKYESSHEFQTKKKRQQQRQHDETAKRQKLQHPQQHAR 255
Query: 213 XXXXXXXXNISGHMPLRPGPSQPVH--NXXXXXXXXXHHYGGGQRAPGGPQTRYXXXXXX 386 + H +R GP+QP+H + HHYG + GGP Sbjct: 256 LPPIQQSGQV--HAQMRAGPNQPMHGGSQPPVAAGPSHHYGKPRGPSGGPSRYPQSGNPS 313
Query: 387 XXXXXXXXXXXXXXXXXXXXXXPAQASG--YAPPAGVGQGSR--GSNYPSGNTNYAQGNS 554 P Q G YA G G R GS Y G NY QG Sbjct: 314 GGYNHPNRGGQGGGGGYGNGPFPPQGRGPPYASSGMPGAGPRGGGSGYGVGAPNYPQGGP 373
Query: 555 YSNVSGGRGPNASGTGRAQQYG 620 YS GRG N G R Q YG Sbjct: 374 YSGSGAGRGSNMMGGNRNQNYG 395
>tr|B8A9I9|B8A9I9_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_05274 PE=4 SV=1 Length = 513
Score = 94.7 bits (234), Expect = 4e-18 Identities = 73/207 (35%), Positives = 77/207 (37%), Gaps = 11/207 (5%) Frame = +3
Query: 33 AKDALDAEYFWTDPLPCSPSSLPKYEASHEFXXXXXXXXXXXXXXXXXXXXXTXXXXXXX 212 AKDALDAEYFWTDPLPC P SLPKYEASHEF Sbjct: 316 AKDALDAEYFWTDPLPCDPKSLPKYEASHEF---QTKKKRQQQRQAEEAAKRQKLQHPPP 372
Query: 213 XXXXXXXXNISGHMPLRPGPSQPVHNXXXXXXXXXHHYGGGQRAPGGPQTRYXXXXXXXX 392 N +RPG QP+HN HHY R PGGP RY Sbjct: 373 HSRLPPIQNPGQPHQIRPG--QPMHNAPPVAAGPSHHY-AKPRGPGGP-NRY-----PQG 423
Query: 393 XXXXXXXXXXXXXXXXXXXXPAQASGYAPP---------AGVGQGSRGSNYPSGNTNYAQ 545 P G PP AG +G GS Y G NY Q Sbjct: 424 GNQGGYNPNRGGQGGGYGSGPYPQQGRGPPPYPGGGMGGAGGPRGGGGSGYGVGGPNYQQ 483
Query: 546 GNSYSNVSGGRGP--NASGTGRAQQYG 620 G Y GRGP N G+ QQYG Sbjct: 484 GGPYGASGPGRGPNYNQGGSRNQQQYG 510
>tr|A3A1P7|A3A1P7_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_004719 PE=4 SV=1 Length = 491
Score = 94.7 bits (234), Expect = 4e-18 Identities = 73/207 (35%), Positives = 77/207 (37%), Gaps = 11/207 (5%) Frame = +3
Query: 33 AKDALDAEYFWTDPLPCSPSSLPKYEASHEFXXXXXXXXXXXXXXXXXXXXXTXXXXXXX 212 AKDALDAEYFWTDPLPC P SLPKYEASHEF Sbjct: 294 AKDALDAEYFWTDPLPCDPKSLPKYEASHEF---QTKKKRQQQRQAEEAAKRQKLQHPPP 350
Query: 213 XXXXXXXXNISGHMPLRPGPSQPVHNXXXXXXXXXHHYGGGQRAPGGPQTRYXXXXXXXX 392 N +RPG QP+HN HHY R PGGP RY Sbjct: 351 HSRLPPIQNPGQPHQIRPG--QPMHNAPPVAAGPSHHY-AKPRGPGGP-NRY-----PQG 401
Query: 393 XXXXXXXXXXXXXXXXXXXXPAQASGYAPP---------AGVGQGSRGSNYPSGNTNYAQ 545 P G PP AG +G GS Y G NY Q Sbjct: 402 GNQGGYNPNRGGQGGGYGSGPYPQQGRGPPPYPGGGMGGAGGPRGGGGSGYGVGGPNYQQ 461
Query: 546 GNSYSNVSGGRGP--NASGTGRAQQYG 620 G Y GRGP N G+ QQYG Sbjct: 462 GGPYGASGPGRGPNYNQGGSRNQQQYG 488
>tr|A7R655|A7R655_VITVI Chromosome undetermined scaffold_1171, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00007988001 PE=4 SV=1 Length = 516
Score = 89.4 bits (220), Expect = 2e-16 Identities = 69/213 (32%), Positives = 77/213 (36%), Gaps = 17/213 (7%) Frame = +3
Query: 33 AKDALDAEYFWTDPLPCSPSSLPKYEASHEFXXXXXXXXXXXXXXXXXXXXXTXXXXXXX 212 AKDALDAEYFW DPLPC P SLPKYE+SH+F Sbjct: 318 AKDALDAEYFWNDPLPCDPKSLPKYESSHDFQTKKKRQQQRKNEEQAKRQKLQHPQQHAR 377
Query: 213 XXXXXXXXNISGHMPLRPGPSQPVHN--XXXXXXXXXHHYGGGQRAPGGPQTRYXXXXXX 386 H GP+ P +N H YG PGGP RY Sbjct: 378 LPPIQHSGR--AHPQHWHGPNHPTNNSQPTVPAGPSHHQYGRPHGLPGGP-NRYPSSGNP 434
Query: 387 XXXXXXXXXXXXXXXXXXXXXXPAQASGYA----PPAGVGQ---------GSRG--SNYP 521 Q GY+ PP G GQ G RG S Y Sbjct: 435 NGGYNPNHG--------------GQVGGYSSAPYPPQGRGQPYGSGVPTTGPRGATSGYG 480
Query: 522 SGNTNYAQGNSYSNVSGGRGPNASGTGRAQQYG 620 G NY+Q + Y + GRGPN G R QQYG Sbjct: 481 VGPPNYSQSSQYGGAAAGRGPNPMGVNRNQQYG 513
>tr|Q8GU42|Q8GU42_PHYPA Putative cyclin dependent kinase OS=Physcomitrella patens GN=cdk PE=2 SV=1 Length = 563
Score = 84.7 bits (208), Expect = 4e-15 Identities = 70/213 (32%), Positives = 80/213 (37%), Gaps = 13/213 (6%) Frame = +3
Query: 21 HQQKAKDALDAEYFWTDPLPCSPSSLPKYEASHEFXXXXXXXXXXXXXXXXXXXXXTXXX 200 H+ AKDALDAEYFW +P PC PSSLPKYEASHE+ Sbjct: 314 HRISAKDALDAEYFWVEPFPCQPSSLPKYEASHEYQTKKKRQQQRQQQEEQAKRMKVLHH 373
Query: 201 XXXXXXXXXXXXNISGHMPLRPGPSQPVHN-----XXXXXXXXXHHYGGGQ------RAP 347 PLRPGP QP HN ++Y GQ RAP Sbjct: 374 PAPHTRLPPIQ-----QQPLRPGPHQPGHNLGPPIHANGMANQHNNYNRGQGASNQGRAP 428
Query: 348 GGPQTRYXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAQASGYAPPAGVGQGSRGSNY--P 521 GG + + PAQ G+A P QG RG Y P Sbjct: 429 GGGRPPH-----GGPNQNGGYGGPNRGGPGGAYGGPAQPGGFAAPNMGHQGGRGGAYGGP 483
Query: 522 SGNTNYAQGNSYSNVSGGRGPNASGTGRAQQYG 620 +G Y G GGRGP GR QQ+G Sbjct: 484 AGGV-YPAG----PYGGGRGPPVG--GRGQQFG 509
>tr|A9TI36|A9TI36_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_170206 PE=4 SV=1 Length = 562
Score = 84.7 bits (208), Expect = 4e-15 Identities = 70/213 (32%), Positives = 80/213 (37%), Gaps = 13/213 (6%) Frame = +3
Query: 21 HQQKAKDALDAEYFWTDPLPCSPSSLPKYEASHEFXXXXXXXXXXXXXXXXXXXXXTXXX 200 H+ AKDALDAEYFW +P PC PSSLPKYEASHE+ Sbjct: 313 HRISAKDALDAEYFWVEPFPCQPSSLPKYEASHEYQTKKKRQQQRQQQEEQAKRMKVLHH 372
Query: 201 XXXXXXXXXXXXNISGHMPLRPGPSQPVHN-----XXXXXXXXXHHYGGGQ------RAP 347 PLRPGP QP HN ++Y GQ RAP Sbjct: 373 PAPHTRLPPIQ-----QQPLRPGPHQPGHNLGPPIHANGMANQHNNYNRGQGGSNQGRAP 427
Query: 348 GGPQTRYXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAQASGYAPPAGVGQGSRGSNY--P 521 GG + + PAQ G+A P QG RG Y P Sbjct: 428 GGGRPPH-----GGPNQNGGYGGPNRGGPGGAYGGPAQPGGFAAPNMGHQGGRGGAYGGP 482
Query: 522 SGNTNYAQGNSYSNVSGGRGPNASGTGRAQQYG 620 +G Y G GGRGP GR QQ+G Sbjct: 483 AGGV-YPAG----PYGGGRGPPVG--GRGQQFG 508
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