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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK954414
Clone id TST39A01NGRL0020_G01
Library
Length 662
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0020_G01. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
CGCGCTGTAGCCATGGATCCATATAGCTTTCTGCGGAGTCTGGACGAGCGTCCCCCTTTC
CTCGGTGCATTGAACGGTCTCAATCCATTGAGCTCTTTGAATGGCTTGAACGTGGATCTC
TCCGCTCCCGTGGATGTGCGAGGCAAGGGCAGAGTTGCCAGAGAAGAAGCAGCCCTTCAA
GCGATTCTTGTGAAGAAGATCACTGATGGAGACTGGGACTCCCTCAAGCCTAACACAGGT
AAGGCTGTCAACGTTGAGGATCACCATATTTGTGTTGCTTACCATGAAGATGCGGAGTCT
GGCTGCCGCGTATGGGAATGGCATGGCCACCTTCTCATCTTCGATGATGATGTTGGCTTC
ACCCCCGAGTATACCTATGGCAACTTCTTCCAGCCCTTAGAGGCAAAGAAATCTCACAGC
CTTTTTGATGAAGAAGATGATGATGACTGCAAGCCCAAGAATGGTGACAAGGTTACACTG
AGCATTGGCCTTGGAGGCATCATCGACAACAGCAGCAAGCAGTCGCTGAGCAAAAACAAG
CAACAAAATGGTCACATTCTCCACAGGGTTGTGAAGAAGGATGCTAGTGAGCTGACGAAG
AAGTAGCGCTCACATCCTCATTAGTGTATATGCATGGACAATACAAAAAACAACAGATGA
AC
■■Homology search results ■■ -
sp_hit_id Q556W1
Definition sp|Q556W1|OXDD_DICDI D-aspartate oxidase OS=Dictyostelium discoideum
Align length 38
Score (bit) 31.6
E-value 3.9
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK954414|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0020_G01, 5'
         (662 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q556W1|OXDD_DICDI D-aspartate oxidase OS=Dictyostelium discoi...    32   3.9  
sp|A6TJ97|Y022_ALKMQ UPF0182 protein Amet_0022 OS=Alkaliphilus m...    31   6.7  
sp|Q00816|HEX2_YEAST Protein HEX2 OS=Saccharomyces cerevisiae GN...    31   6.7  
sp|Q24SK9|ENGB_DESHY Probable GTP-binding protein engB OS=Desulf...    30   8.7  

>sp|Q556W1|OXDD_DICDI D-aspartate oxidase OS=Dictyostelium
           discoideum GN=ddo-1 PE=3 SV=1
          Length = 346

 Score = 31.6 bits (70), Expect = 3.9
 Identities = 14/38 (36%), Positives = 21/38 (55%)
 Frame = -3

Query: 234 VRLEGVPVSISDLLHKNRLKGCFFSGNSALASHIHGSG 121
           + ++GV V +    H+ RL+  FF G S L  H +G G
Sbjct: 274 IEIQGVKVGLRPARHEIRLENEFFEGGSKLVVHNYGHG 311


>sp|A6TJ97|Y022_ALKMQ UPF0182 protein Amet_0022 OS=Alkaliphilus
           metalliredigens (strain QYMF) GN=Amet_0022 PE=3 SV=1
          Length = 932

 Score = 30.8 bits (68), Expect = 6.7
 Identities = 15/59 (25%), Positives = 30/59 (50%), Gaps = 5/59 (8%)
 Frame = -3

Query: 471 LVTILGLAVIIIFFIKKAVRFLCL*GLEEVAIGILG-----GEANIIIEDEKVAMPFPY 310
           L ++L    ++  ++K+  + L +  +  +A+GILG     G  N I+   ++A   PY
Sbjct: 266 LASLLSATGVVYAYVKRNPKLLLIAPISIIAVGILGNVISLGVQNFIVSPNEIARELPY 324


>sp|Q00816|HEX2_YEAST Protein HEX2 OS=Saccharomyces cerevisiae
           GN=HEX2 PE=1 SV=1
          Length = 1014

 Score = 30.8 bits (68), Expect = 6.7
 Identities = 25/91 (27%), Positives = 41/91 (45%), Gaps = 6/91 (6%)
 Frame = +1

Query: 244 AVNVEDHHICVAYHEDAESGCRVWEWHG-HLLIFDDDVGFTPEYTYGNFFQPLEAKKSHS 420
           AV  ++ H+   +   A +  R    HG H+L++DDD   +   +   F +  +   S  
Sbjct: 687 AVESKEKHVPQLHKASANNTTRQ---HGSHMLLYDDDNYSSSSDSEQQFIEDSQYNSSDD 743

Query: 421 LFDEEDDDDCKPKNGD-----KVTLSIGLGG 498
             +E+DDD     N D     + TLS+G  G
Sbjct: 744 EEEEDDDDQEVDDNHDEGLSLRRTLSLGKSG 774


>sp|Q24SK9|ENGB_DESHY Probable GTP-binding protein engB
           OS=Desulfitobacterium hafniense (strain Y51) GN=engB
           PE=3 SV=1
          Length = 201

 Score = 30.4 bits (67), Expect = 8.7
 Identities = 16/43 (37%), Positives = 22/43 (51%)
 Frame = +1

Query: 196 KITDGDWDSLKPNTGKAVNVEDHHICVAYHEDAESGCRVWEWH 324
           KI+ G W        KA+++ D HI + Y   AE+G  V E H
Sbjct: 147 KISKGQWGKHLSQIAKALHIPDWHIIITY--SAETGLGVPELH 187
tr_hit_id A9NN12
Definition tr|A9NN12|A9NN12_PICSI Putative uncharacterized protein OS=Picea sitchensis
Align length 122
Score (bit) 122.0
E-value 3.0e-26
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK954414|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0020_G01, 5'
         (662 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9NN12|A9NN12_PICSI Putative uncharacterized protein OS=Picea...   122   3e-26
tr|Q9LFF8|Q9LFF8_ARATH Putative uncharacterized protein F4P12_33...   121   4e-26
tr|Q8VXU5|Q8VXU5_ARATH AT3g53630/F4P12_330 OS=Arabidopsis thalia...   121   4e-26
tr|A9PAG3|A9PAG3_POPTR Putative uncharacterized protein OS=Popul...   115   2e-24
tr|B6UB08|B6UB08_MAIZE Putative uncharacterized protein OS=Zea m...   107   5e-22
tr|Q10N76|Q10N76_ORYSJ Os03g0279600 protein OS=Oryza sativa subs...   105   2e-21
tr|B8AL34|B8AL34_ORYSI Putative uncharacterized protein OS=Oryza...   105   2e-21
tr|A3AGM9|A3AGM9_ORYSJ Putative uncharacterized protein OS=Oryza...   105   2e-21
tr|A5C253|A5C253_VITVI Putative uncharacterized protein OS=Vitis...   103   7e-21
tr|A9NP94|A9NP94_PICSI Putative uncharacterized protein OS=Picea...   103   1e-20
tr|A9P034|A9P034_PICSI Putative uncharacterized protein OS=Picea...   102   3e-20
tr|A9TGD9|A9TGD9_PHYPA Predicted protein (Fragment) OS=Physcomit...    94   1e-17
tr|A9T9V9|A9T9V9_PHYPA Predicted protein OS=Physcomitrella paten...    92   4e-17
tr|A9SKZ1|A9SKZ1_PHYPA Predicted protein (Fragment) OS=Physcomit...    89   3e-16
tr|Q6TYP9|Q6TYP9_PONPY Sperm ion channel (Fragment) OS=Pongo pyg...    36   1.9  
tr|A7SLP2|A7SLP2_NEMVE Predicted protein OS=Nematostella vectens...    36   1.9  
tr|Q01W17|Q01W17_SOLUE Putative uncharacterized protein OS=Solib...    35   4.1  
tr|B1JX10|B1JX10_BURCC Glycosyl transferase family 2 OS=Burkhold...    35   4.1  
tr|B7C693|B7C693_9FIRM Putative uncharacterized protein (Fragmen...    34   7.1  
tr|Q8XMB8|Q8XMB8_CLOPE Beta-galactosidase OS=Clostridium perfrin...    34   9.2  
tr|B5JLS1|B5JLS1_9BACT Histidine kinase domain protein OS=Verruc...    34   9.2  
tr|B1RI18|B1RI18_CLOPE Beta-galactosidase OS=Clostridium perfrin...    34   9.2  

>tr|A9NN12|A9NN12_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 185

 Score =  122 bits (305), Expect = 3e-26
 Identities = 56/122 (45%), Positives = 84/122 (68%), Gaps = 1/122 (0%)
 Frame = +1

Query: 145 KGRVAREEAALQAILVKKITDGDWDSLKPNTGKAVNVEDHHICVAYHEDAESGCRVWEWH 324
           K  + REEA L+  +V+ I+ GD   LKPN+G+AV + DH +CV +HED+E G RVWEWH
Sbjct: 49  KSPLQREEAKLEKNIVQIISSGDTGELKPNSGQAVTIGDHQVCVGFHEDSEPGYRVWEWH 108

Query: 325 GHLLIFDDDVGFTPEYTYGNFFQ-PLEAKKSHSLFDEEDDDDCKPKNGDKVTLSIGLGGI 501
           GH++++D++ G+T EY YGNFF+   E K+  +   E++D++ +   G     S+GLGG+
Sbjct: 109 GHIMLYDEEKGYTAEYIYGNFFEKATEIKRRAAKPQEKNDNENEGSGG-----SVGLGGL 163

Query: 502 ID 507
           ID
Sbjct: 164 ID 165


>tr|Q9LFF8|Q9LFF8_ARATH Putative uncharacterized protein F4P12_330
           OS=Arabidopsis thaliana GN=F4P12_330 PE=4 SV=1
          Length = 210

 Score =  121 bits (303), Expect = 4e-26
 Identities = 62/145 (42%), Positives = 89/145 (61%)
 Frame = +1

Query: 133 DVRGKGRVAREEAALQAILVKKITDGDWDSLKPNTGKAVNVEDHHICVAYHEDAESGCRV 312
           D  G+  + REEA L+  L++ I  G  DSLKPN+G+AV V +HHICV +HED ES  RV
Sbjct: 51  DGEGQTSLDREEARLEKELIRVIVSGRSDSLKPNSGQAVTVNEHHICVGFHEDEESDYRV 110

Query: 313 WEWHGHLLIFDDDVGFTPEYTYGNFFQPLEAKKSHSLFDEEDDDDCKPKNGDKVTLSIGL 492
           WEWHGH+++FD++ G+TPEY YGN+F+ L  K  ++   E++    K +  ++   ++GL
Sbjct: 111 WEWHGHIMLFDEENGYTPEYIYGNYFERLPVKLPNNRRVEKEK---KKEMKEEEVENLGL 167

Query: 493 GGIIDXXXXXXXXXXXXXXGHILHR 567
             +ID              G ILHR
Sbjct: 168 RELID--------GGDAAPGRILHR 184


>tr|Q8VXU5|Q8VXU5_ARATH AT3g53630/F4P12_330 OS=Arabidopsis thaliana
           GN=At3g53630 PE=2 SV=1
          Length = 194

 Score =  121 bits (303), Expect = 4e-26
 Identities = 62/145 (42%), Positives = 89/145 (61%)
 Frame = +1

Query: 133 DVRGKGRVAREEAALQAILVKKITDGDWDSLKPNTGKAVNVEDHHICVAYHEDAESGCRV 312
           D  G+  + REEA L+  L++ I  G  DSLKPN+G+AV V +HHICV +HED ES  RV
Sbjct: 51  DGEGQTSLDREEARLEKELIRVIVSGRSDSLKPNSGQAVTVNEHHICVGFHEDEESDYRV 110

Query: 313 WEWHGHLLIFDDDVGFTPEYTYGNFFQPLEAKKSHSLFDEEDDDDCKPKNGDKVTLSIGL 492
           WEWHGH+++FD++ G+TPEY YGN+F+ L  K  ++   E++    K +  ++   ++GL
Sbjct: 111 WEWHGHIMLFDEENGYTPEYIYGNYFERLPVKLPNNRRVEKEK---KKEMKEEEVENLGL 167

Query: 493 GGIIDXXXXXXXXXXXXXXGHILHR 567
             +ID              G ILHR
Sbjct: 168 RELID--------GGDAAPGRILHR 184


>tr|A9PAG3|A9PAG3_POPTR Putative uncharacterized protein OS=Populus
           trichocarpa PE=2 SV=1
          Length = 201

 Score =  115 bits (289), Expect = 2e-24
 Identities = 57/152 (37%), Positives = 94/152 (61%), Gaps = 5/152 (3%)
 Frame = +1

Query: 133 DVRGKGRVAREEAALQAILVKKITDGDWDSLKPNTGKAVNVEDHHICVAYHEDAESGCRV 312
           D   K ++++EE+ L+  +++ I  G  DSLKPN+G+AV + +HHICV +HE+  S  RV
Sbjct: 51  DDTNKTQLSKEESKLEKEIIRVILSGKIDSLKPNSGQAVTIGEHHICVGFHEEQGSDYRV 110

Query: 313 WEWHGHLLIFDDDVGFTPEYTYGNFFQPLEAKKSHSLF-----DEEDDDDCKPKNGDKVT 477
           WEWHGH+++FD++ G+TPEY YGN+F+ L  K + S       ++E+++D +    +K+ 
Sbjct: 111 WEWHGHIMLFDEEDGYTPEYIYGNYFERLLGKTAASTTATPKQEQEENEDEEEGEEEKIG 170

Query: 478 LSIGLGGIIDXXXXXXXXXXXXXXGHILHRVV 573
            ++GL  +ID                ILHR++
Sbjct: 171 -NLGLRELID--------GGDSGAARILHRII 193


>tr|B6UB08|B6UB08_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 267

 Score =  107 bits (268), Expect = 5e-22
 Identities = 46/103 (44%), Positives = 72/103 (69%), Gaps = 1/103 (0%)
 Frame = +1

Query: 133 DVRGKGRVAREEAALQAILVKKITDGDW-DSLKPNTGKAVNVEDHHICVAYHEDAESGCR 309
           + R +  +AREEA L+  +V+ +  G+  D LKPN+G++V V DHH+CV +H+DA    R
Sbjct: 114 EARRRRMLAREEAKLEKEIVRMVLAGEAEDKLKPNSGQSVAVGDHHLCVGFHDDASGEYR 173

Query: 310 VWEWHGHLLIFDDDVGFTPEYTYGNFFQPLEAKKSHSLFDEED 438
           +WEWHGH+++FDD+ G++ EY YGN F+PL A  + +   E++
Sbjct: 174 IWEWHGHVMLFDDEEGYSAEYIYGNHFEPLAAATARAKKKEKE 216


>tr|Q10N76|Q10N76_ORYSJ Os03g0279600 protein OS=Oryza sativa subsp.
           japonica GN=Os03g0279600 PE=2 SV=1
          Length = 247

 Score =  105 bits (262), Expect = 2e-21
 Identities = 48/112 (42%), Positives = 76/112 (67%), Gaps = 1/112 (0%)
 Frame = +1

Query: 133 DVRGKGRVAREEAALQAILVKKITDGDWD-SLKPNTGKAVNVEDHHICVAYHEDAESGCR 309
           + R +  +AREEA L+  +V+ +  G+ + +LKPN+G++V V DHHICV +H+D+    R
Sbjct: 95  EARRRRTLAREEAKLEKEIVRLVLAGEAEEALKPNSGQSVAVGDHHICVGFHDDSGGVYR 154

Query: 310 VWEWHGHLLIFDDDVGFTPEYTYGNFFQPLEAKKSHSLFDEEDDDDCKPKNG 465
           VWEWHGH++IFDD+ G++ EY YGN F+PL A  + +   E +  + +  +G
Sbjct: 155 VWEWHGHVMIFDDEDGYSAEYIYGNHFEPLAAATARAKEKEREKREKELSSG 206


>tr|B8AL34|B8AL34_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_11010 PE=4 SV=1
          Length = 597

 Score =  105 bits (262), Expect = 2e-21
 Identities = 48/112 (42%), Positives = 76/112 (67%), Gaps = 1/112 (0%)
 Frame = +1

Query: 133 DVRGKGRVAREEAALQAILVKKITDGDWD-SLKPNTGKAVNVEDHHICVAYHEDAESGCR 309
           + R +  +AREEA L+  +V+ +  G+ + +LKPN+G++V V DHHICV +H+D+    R
Sbjct: 95  EARRRRTLAREEAKLEKEIVRLVLAGEAEEALKPNSGQSVAVGDHHICVGFHDDSGGVYR 154

Query: 310 VWEWHGHLLIFDDDVGFTPEYTYGNFFQPLEAKKSHSLFDEEDDDDCKPKNG 465
           VWEWHGH++IFDD+ G++ EY YGN F+PL A  + +   E +  + +  +G
Sbjct: 155 VWEWHGHVMIFDDEDGYSAEYIYGNHFEPLAAATARAKEKEREKREKELSSG 206


>tr|A3AGM9|A3AGM9_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_009951 PE=4 SV=1
          Length = 249

 Score =  105 bits (262), Expect = 2e-21
 Identities = 48/112 (42%), Positives = 76/112 (67%), Gaps = 1/112 (0%)
 Frame = +1

Query: 133 DVRGKGRVAREEAALQAILVKKITDGDWD-SLKPNTGKAVNVEDHHICVAYHEDAESGCR 309
           + R +  +AREEA L+  +V+ +  G+ + +LKPN+G++V V DHHICV +H+D+    R
Sbjct: 95  EARRRRTLAREEAKLEKEIVRLVLAGEAEEALKPNSGQSVAVGDHHICVGFHDDSGGVYR 154

Query: 310 VWEWHGHLLIFDDDVGFTPEYTYGNFFQPLEAKKSHSLFDEEDDDDCKPKNG 465
           VWEWHGH++IFDD+ G++ EY YGN F+PL A  + +   E +  + +  +G
Sbjct: 155 VWEWHGHVMIFDDEDGYSAEYIYGNHFEPLAAATARAKEKEREKREKELSSG 206


>tr|A5C253|A5C253_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_022420 PE=4 SV=1
          Length = 164

 Score =  103 bits (258), Expect = 7e-21
 Identities = 42/106 (39%), Positives = 75/106 (70%)
 Frame = +1

Query: 127 PVDVRGKGRVAREEAALQAILVKKITDGDWDSLKPNTGKAVNVEDHHICVAYHEDAESGC 306
           P+D    G++A EEA ++  +++ IT G   +LKPN+G+A+ + +H+ICV++ ++AES C
Sbjct: 28  PID--NTGQIAIEEAKIEKAIIEAITRGKAQTLKPNSGEAIPIGEHYICVSFQDEAESEC 85

Query: 307 RVWEWHGHLLIFDDDVGFTPEYTYGNFFQPLEAKKSHSLFDEEDDD 444
           RVWEWHGH++ ++ + G+T +Y YGN+F+    + +  +F +E D+
Sbjct: 86  RVWEWHGHIMSYNGEHGYTQDYVYGNYFE----RMTRRVFSDESDE 127


>tr|A9NP94|A9NP94_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 175

 Score =  103 bits (256), Expect = 1e-20
 Identities = 45/87 (51%), Positives = 62/87 (71%)
 Frame = +1

Query: 145 KGRVAREEAALQAILVKKITDGDWDSLKPNTGKAVNVEDHHICVAYHEDAESGCRVWEWH 324
           K ++A+E A L+  +V+ I  G  D LKPN+ ++V V  HHICVA  E  ESG RVW+WH
Sbjct: 48  KSKIAKETAKLEQKIVRMILSGKGDELKPNSCQSVEVGGHHICVASTEKVESGYRVWQWH 107

Query: 325 GHLLIFDDDVGFTPEYTYGNFFQPLEA 405
           GH++++D++ GF  EY YGN+FQ LEA
Sbjct: 108 GHIMLYDEEKGFRLEYIYGNYFQRLEA 134