DK954423
Clone id TST39A01NGRL0020_G10
Library
Length 585
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0020_G10. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence
CACATAGCACCTACTGCCTTCGCAAGTAGGTTTAGGGTTTCTGCAGTAGAGCAGCTATGG
TGTCCGCCTGCTTCTCTTCAGTTAATGGTTCGCTTGCAGCAGCAGCTGCCTCCACCACTA
GGCCAGAGGGGCGTTTAACCCTGTTGCAGGCTCCCCGCTCCTTGCGGACCTTGCGACCGT
TCGAGCTTCGCATGCTCTCGCTGTCTGTCCCTCGCAAAGGTCTACACAGACATGGATATG
GTGTGGTTGGGCAAGCTCATGCAGAGCTTTCTGTGGAAGAAGTTCAAGCCCTCGATGCCT
CCTCAGACGAAGATGAGCGCGAAGAAGGTGACTCTCTTGATAACGGACCTTCTTTTCGGG
ACAACGGCCCGCCCTTTGGTGAGTCTGTGGCCAAGCTGTATGTTGGGAACCTGCCATGGA
GCTGCAACAGCGAAGAACTTGCTGGCGTTTTTCAGAAAGTGGGCAGCGTAGACATGGTTG
AGGTTATTTATGACAAAGAGTCTGGCAGGAGTCGTGGTTTTGGGTTTGTCACTATGAGCT
CTGTAGAGGACTGTAATACTGCCATTGAGAAGCTAGACGGGGCTG
■■Homology search results ■■ -
sp_hit_id Q08937
Definition sp|Q08937|ROC2_NICSY 29 kDa ribonucleoprotein B, chloroplastic OS=Nicotiana sylvestris
Align length 71
Score (bit) 83.6
E-value 7.0e-16
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK954423|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0020_G10, 5'
(585 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q08937|ROC2_NICSY 29 kDa ribonucleoprotein B, chloroplastic O... 84 7e-16
sp|P28644|ROC1_SPIOL 28 kDa ribonucleoprotein, chloroplastic OS=... 84 7e-16
sp|Q9ZUU4|ROC1_ARATH Putative ribonucleoprotein At2g37220, chlor... 84 7e-16
sp|P49314|ROC2_NICPL 31 kDa ribonucleoprotein, chloroplastic OS=... 83 9e-16
sp|P82277|RRP2_SPIOL 30S ribosomal protein 2, chloroplastic OS=S... 80 7e-15
sp|Q08935|ROC1_NICSY 29 kDa ribonucleoprotein A, chloroplastic O... 80 7e-15
sp|Q04836|ROC3_ARATH 31 kDa ribonucleoprotein, chloroplastic OS=... 78 3e-14
sp|P19682|ROC3_NICSY 28 kDa ribonucleoprotein, chloroplastic OS=... 78 4e-14
sp|P49313|ROC1_NICPL 30 kDa ribonucleoprotein, chloroplastic OS=... 76 1e-13
sp|Q43349|ROC2_ARATH 29 kDa ribonucleoprotein, chloroplastic OS=... 74 4e-13
sp|P19683|ROC4_NICSY 31 kDa ribonucleoprotein, chloroplastic OS=... 74 7e-13
sp|P19684|ROC5_NICSY 33 kDa ribonucleoprotein, chloroplastic OS=... 72 2e-12
sp|Q44554|RBPB_ANASP Putative RNA-binding protein rbpB OS=Anabae... 62 2e-09
sp|Q9WX37|RBPE_ANASP Putative RNA-binding protein rbpE OS=Anabae... 62 3e-09
sp|Q99070|GRP2_SORBI Glycine-rich RNA-binding protein 2 OS=Sorgh... 60 6e-09
sp|Q5RC80|RBM39_PONAB RNA-binding protein 39 OS=Pongo abelii GN=... 60 8e-09
sp|Q8VH51|RBM39_MOUSE RNA-binding protein 39 OS=Mus musculus GN=... 60 8e-09
sp|Q14498|RBM39_HUMAN RNA-binding protein 39 OS=Homo sapiens GN=... 60 8e-09
sp|Q03251|GRP8_ARATH Glycine-rich RNA-binding protein 8 OS=Arabi... 60 8e-09
sp|Q57014|RBPA_SYNY3 Putative RNA-binding protein rbpA OS=Synech... 60 1e-08
sp|Q5RF83|CIRBP_PONAB Cold-inducible RNA-binding protein OS=Pong... 60 1e-08
sp|Q14011|CIRBP_HUMAN Cold-inducible RNA-binding protein OS=Homo... 60 1e-08
sp|Q86U06|RBM23_HUMAN Probable RNA-binding protein 23 OS=Homo sa... 59 1e-08
sp|P60825|CIRBP_RAT Cold-inducible RNA-binding protein OS=Rattus... 59 1e-08
sp|P60824|CIRBP_MOUSE Cold-inducible RNA-binding protein OS=Mus ... 59 1e-08
sp|P60826|CIRBP_CRIGR Cold-inducible RNA-binding protein OS=Cric... 59 1e-08
sp|Q9WX39|RBPF_ANASP Putative RNA-binding protein rbpF OS=Anabae... 59 2e-08
sp|Q44560|RBPA_ANASP Putative RNA-binding protein rbpA OS=Anabae... 59 2e-08
sp|Q8C7E9|CSTFT_MOUSE Cleavage stimulation factor 64 kDa subunit... 59 2e-08
sp|Q9H0L4|CSTFT_HUMAN Cleavage stimulation factor 64 kDa subunit... 59 2e-08

>sp|Q08937|ROC2_NICSY 29 kDa ribonucleoprotein B, chloroplastic
OS=Nicotiana sylvestris PE=2 SV=1
Length = 291

Score = 83.6 bits (205), Expect = 7e-16
Identities = 41/71 (57%), Positives = 56/71 (78%)
Frame = +3

Query: 369 PPFGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVE 548
P F E + KL+VGNLP+S +S LAG+F++ G+V+MVEVIYDK +GRSRGFGFVTMS+ E
Sbjct: 81 PRFSEDL-KLFVGNLPFSVDSAALAGLFERAGNVEMVEVIYDKLTGRSRGFGFVTMSTKE 139

Query: 549 DCNTAIEKLDG 581
+ A ++ +G
Sbjct: 140 EVEAAEQQFNG 150



Score = 68.9 bits (167), Expect = 2e-11
Identities = 36/83 (43%), Positives = 51/83 (61%), Gaps = 8/83 (9%)
Frame = +3

Query: 357 RDNGPPFG--------ESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRS 512
RD FG +S ++YVGNL W + L +F + G+V +V+YD++SGRS
Sbjct: 188 RDGNSSFGGARGGRSVDSSNRVYVGNLSWGVDDLALKELFSEQGNVVDAKVVYDRDSGRS 247

Query: 513 RGFGFVTMSSVEDCNTAIEKLDG 581
RGFGFVT SS ++ N AI+ L+G
Sbjct: 248 RGFGFVTYSSSKEVNDAIDSLNG 270


>sp|P28644|ROC1_SPIOL 28 kDa ribonucleoprotein, chloroplastic
OS=Spinacia oleracea PE=1 SV=1
Length = 233

Score = 83.6 bits (205), Expect = 7e-16
Identities = 41/76 (53%), Positives = 56/76 (73%), Gaps = 2/76 (2%)
Frame = +3

Query: 360 DNGPPFGE--SVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVT 533
+ G F E AKL+VGNLP+ +SE+LAG+F G V++ EVIY++E+ RSRGFGFVT
Sbjct: 43 EGGQGFSEPPEEAKLFVGNLPYDVDSEKLAGIFDAAGVVEIAEVIYNRETDRSRGFGFVT 102

Query: 534 MSSVEDCNTAIEKLDG 581
MS+VE+ A+E L+G
Sbjct: 103 MSTVEEAEKAVELLNG 118



Score = 71.6 bits (174), Expect = 3e-12
Identities = 34/67 (50%), Positives = 44/67 (65%)
Frame = +3

Query: 381 ESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNT 560
E ++YVGNLPW ++ L +F + G V V+ D+E+GRSRGFGFVTMSS + N
Sbjct: 146 EPSCRVYVGNLPWDVDTSRLEQLFSEHGKVVSARVVSDRETGRSRGFGFVTMSSESEVND 205

Query: 561 AIEKLDG 581
AI LDG
Sbjct: 206 AIAALDG 212


>sp|Q9ZUU4|ROC1_ARATH Putative ribonucleoprotein At2g37220,
chloroplastic OS=Arabidopsis thaliana GN=At2g37220 PE=1
SV=1
Length = 289

Score = 83.6 bits (205), Expect = 7e-16
Identities = 42/79 (53%), Positives = 58/79 (73%), Gaps = 3/79 (3%)
Frame = +3

Query: 354 FRDNGPPFGESVA---KLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFG 524
F D PP +S + KL+VGNLP++ +S +LA +F+ G+V+MVEVIYDK +GRSRGFG
Sbjct: 76 FADVAPPKEQSFSADLKLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKITGRSRGFG 135

Query: 525 FVTMSSVEDCNTAIEKLDG 581
FVTMSSV + A ++ +G
Sbjct: 136 FVTMSSVSEVEAAAQQFNG 154



Score = 68.6 bits (166), Expect = 2e-11
Identities = 34/81 (41%), Positives = 47/81 (58%)
Frame = +3

Query: 342 NGPSFRDNGPPFGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGF 521
+G + G S ++YVGNL W + L +F + G V VIYD++SGRS+GF
Sbjct: 188 SGSGYGGGGGSGAGSGNRVYVGNLSWGVDDMALESLFSEQGKVVEARVIYDRDSGRSKGF 247

Query: 522 GFVTMSSVEDCNTAIEKLDGA 584
GFVT S ++ AI+ LDGA
Sbjct: 248 GFVTYDSSQEVQNAIKSLDGA 268


>sp|P49314|ROC2_NICPL 31 kDa ribonucleoprotein, chloroplastic
OS=Nicotiana plumbaginifolia PE=2 SV=1
Length = 292

Score = 83.2 bits (204), Expect = 9e-16
Identities = 41/71 (57%), Positives = 56/71 (78%)
Frame = +3

Query: 369 PPFGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVE 548
P F E + KL+VGNLP+S +S LAG+F++ G+V++VEVIYDK SGRSRGFGFVTMS+ E
Sbjct: 82 PRFSEDL-KLFVGNLPFSVDSAALAGLFERAGNVEIVEVIYDKLSGRSRGFGFVTMSTKE 140

Query: 549 DCNTAIEKLDG 581
+ A ++ +G
Sbjct: 141 EVEAAEQQFNG 151



Score = 69.7 bits (169), Expect = 1e-11
Identities = 36/83 (43%), Positives = 51/83 (61%), Gaps = 8/83 (9%)
Frame = +3

Query: 357 RDNGPPFG--------ESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRS 512
RD FG +S ++YVGNL W + L +F + G+V +V+YD++SGRS
Sbjct: 189 RDGNSSFGGARGGRSVDSSNRVYVGNLSWGVDDLALKELFSEQGNVVDAKVVYDRDSGRS 248

Query: 513 RGFGFVTMSSVEDCNTAIEKLDG 581
RGFGFVT SS ++ N AI+ L+G
Sbjct: 249 RGFGFVTYSSAKEVNDAIDSLNG 271


>sp|P82277|RRP2_SPIOL 30S ribosomal protein 2, chloroplastic
OS=Spinacia oleracea GN=PSRP2 PE=1 SV=1
Length = 260

Score = 80.1 bits (196), Expect = 7e-15
Identities = 36/67 (53%), Positives = 51/67 (76%)
Frame = +3

Query: 378 GESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCN 557
GE +LYVGN+P + N++EL + ++ G++++ EV+YDK SGRSR FGFVTM +VED N
Sbjct: 80 GEGARRLYVGNIPRNLNNDELRTIVEEHGAIEIAEVMYDKYSGRSRRFGFVTMKTVEDAN 139

Query: 558 TAIEKLD 578
IEKL+
Sbjct: 140 AVIEKLN 146



Score = 45.8 bits (107), Expect = 2e-04
Identities = 26/70 (37%), Positives = 39/70 (55%)
Frame = +3

Query: 375 FGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDC 554
F ES K+Y+GNL + +E L F + G V +V + +S GFGFV+ SS E+
Sbjct: 179 FVESPYKVYIGNLAKTVTNELLKDFFSEKGKVLGAKVQRTPGTSKSNGFGFVSFSSEEEV 238

Query: 555 NTAIEKLDGA 584
AI+ L+ +
Sbjct: 239 EAAIQALNNS 248


>sp|Q08935|ROC1_NICSY 29 kDa ribonucleoprotein A, chloroplastic
OS=Nicotiana sylvestris PE=2 SV=1
Length = 273

Score = 80.1 bits (196), Expect = 7e-15
Identities = 37/63 (58%), Positives = 51/63 (80%)
Frame = +3

Query: 393 KLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEK 572
K++VGNLP+S +S LA +F++ G+V+MVEVIYDK +GRSRGFGFVTMSS E+ A ++
Sbjct: 88 KIFVGNLPFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQQ 147

Query: 573 LDG 581
+G
Sbjct: 148 FNG 150



Score = 75.5 bits (184), Expect = 2e-13
Identities = 35/67 (52%), Positives = 47/67 (70%)
Frame = +3

Query: 381 ESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNT 560
+S ++YVGNL W + + L +F + G V +V+YD++SGRSRGFGFVT SS E+ N
Sbjct: 185 DSSNRVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVNN 244

Query: 561 AIEKLDG 581
AIE LDG
Sbjct: 245 AIESLDG 251


>sp|Q04836|ROC3_ARATH 31 kDa ribonucleoprotein, chloroplastic
OS=Arabidopsis thaliana GN=RBP31 PE=1 SV=1
Length = 329

Score = 78.2 bits (191), Expect = 3e-14
Identities = 35/63 (55%), Positives = 52/63 (82%)
Frame = +3

Query: 390 AKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIE 569
AKL+VGNL + NS+ LA +F++ G+V++ EVIY++E+ +SRGFGFVTMSSV++ TA+E
Sbjct: 150 AKLFVGNLAYDVNSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSSVDEAETAVE 209

Query: 570 KLD 578
K +
Sbjct: 210 KFN 212



Score = 77.0 bits (188), Expect = 6e-14
Identities = 36/74 (48%), Positives = 48/74 (64%)
Frame = +3

Query: 360 DNGPPFGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMS 539
+ P E ++YVGNLPW ++ L +F + G V V+YD+E+GRSRGFGFVTMS
Sbjct: 234 ERAPRVYEPAFRVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMS 293

Query: 540 SVEDCNTAIEKLDG 581
V++ N AI LDG
Sbjct: 294 DVDELNEAISALDG 307


>sp|P19682|ROC3_NICSY 28 kDa ribonucleoprotein, chloroplastic
OS=Nicotiana sylvestris PE=1 SV=1
Length = 276

Score = 77.8 bits (190), Expect = 4e-14
Identities = 36/60 (60%), Positives = 50/60 (83%)
Frame = +3

Query: 390 AKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIE 569
AKL+VGNLP+ +SE LA +FQ+ G V++ EVIY++E+ RSRGFGFVTMS+VE+ + A+E
Sbjct: 97 AKLFVGNLPYDIDSEGLAQLFQQAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEADKAVE 156



Score = 72.4 bits (176), Expect = 2e-12
Identities = 34/74 (45%), Positives = 46/74 (62%)
Frame = +3

Query: 360 DNGPPFGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMS 539
+ P + ++YVGN+PW + L VF + G V V++D+ESGRSRGFGFVTMS
Sbjct: 181 ERAPRTFQPTYRIYVGNIPWDIDDARLEQVFSEHGKVVSARVVFDRESGRSRGFGFVTMS 240

Query: 540 SVEDCNTAIEKLDG 581
S + + AI LDG
Sbjct: 241 SEAEMSEAIANLDG 254


>sp|P49313|ROC1_NICPL 30 kDa ribonucleoprotein, chloroplastic
OS=Nicotiana plumbaginifolia PE=2 SV=1
Length = 279

Score = 76.3 bits (186), Expect = 1e-13
Identities = 36/63 (57%), Positives = 50/63 (79%)
Frame = +3

Query: 393 KLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEK 572
K++VGNL +S +S LA +F++ G+V+MVEVIYDK +GRSRGFGFVTMSS E+ A ++
Sbjct: 88 KIFVGNLLFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQQ 147

Query: 573 LDG 581
+G
Sbjct: 148 FNG 150



Score = 76.3 bits (186), Expect = 1e-13
Identities = 40/85 (47%), Positives = 53/85 (62%), Gaps = 8/85 (9%)
Frame = +3

Query: 351 SFRDNGPPFG--------ESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESG 506
SFR+N G +S ++YVGNL W + + L +F + G V +V+YD++SG
Sbjct: 173 SFRENSSFRGGSRGGGSFDSSNRVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSG 232

Query: 507 RSRGFGFVTMSSVEDCNTAIEKLDG 581
RSRGFGFVT SS E+ N AIE LDG
Sbjct: 233 RSRGFGFVTYSSAEEVNNAIESLDG 257


>sp|Q43349|ROC2_ARATH 29 kDa ribonucleoprotein, chloroplastic
OS=Arabidopsis thaliana GN=RBP29 PE=1 SV=2
Length = 342

Score = 74.3 bits (181), Expect = 4e-13
Identities = 34/63 (53%), Positives = 49/63 (77%)
Frame = +3

Query: 393 KLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEK 572
KL+VGNL ++ +S +LA +F+ G+V+MVEVIYDK +GRSRGFGFVTMS+ + A ++
Sbjct: 100 KLFVGNLSFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSTAAEVEAAAQQ 159

Query: 573 LDG 581
+G
Sbjct: 160 FNG 162



Score = 68.6 bits (166), Expect = 2e-11
Identities = 32/64 (50%), Positives = 43/64 (67%)
Frame = +3

Query: 393 KLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEK 572
+LYVGNL W + L +F + G V VIYD++SGRS+GFGFVT+SS ++ AI
Sbjct: 258 RLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAINS 317

Query: 573 LDGA 584
L+GA
Sbjct: 318 LNGA 321


tr_hit_id A5BDH4
Definition tr|A5BDH4|A5BDH4_VITVI Putative uncharacterized protein OS=Vitis vinifera
Align length 64
Score (bit) 96.7
E-value 9.0e-19
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK954423|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0020_G10, 5'
(585 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A5BDH4|A5BDH4_VITVI Putative uncharacterized protein OS=Vitis... 97 9e-19
tr|A9SLJ0|A9SLJ0_PHYPA Predicted protein (Fragment) OS=Physcomit... 96 2e-18
tr|A7NXI6|A7NXI6_VITVI Chromosome chr5 scaffold_2, whole genome ... 96 2e-18
tr|B4FLX0|B4FLX0_MAIZE Putative uncharacterized protein OS=Zea m... 91 4e-17
tr|B6U471|B6U471_MAIZE Ribonucleoprotein A OS=Zea mays PE=2 SV=1 90 1e-16
tr|A9PFU9|A9PFU9_POPTR Putative uncharacterized protein OS=Popul... 90 1e-16
tr|B6T531|B6T531_MAIZE Ribonucleoprotein A OS=Zea mays PE=2 SV=1 89 1e-16
tr|Q8S7G2|Q8S7G2_ORYSA Putative ribonucleoprotein OS=Oryza sativ... 89 2e-16
tr|Q41124|Q41124_PHAVU Chloroplast RNA binding protein OS=Phaseo... 89 2e-16
tr|Q10KP0|Q10KP0_ORYSJ Os03g0376600 protein OS=Oryza sativa subs... 89 2e-16
tr|A2XHA8|A2XHA8_ORYSI Putative uncharacterized protein OS=Oryza... 89 2e-16
tr|A6N1F5|A6N1F5_ORYSI Chloroplast 29 kDa ribonucleoprotein (Fra... 88 4e-16
tr|Q8LHN4|Q8LHN4_ORYSJ Os07g0631900 protein OS=Oryza sativa subs... 87 5e-16
tr|A2YNZ1|A2YNZ1_ORYSI Putative uncharacterized protein OS=Oryza... 87 5e-16
tr|B7FKI6|B7FKI6_MEDTR Putative uncharacterized protein OS=Medic... 87 7e-16
tr|Q6K6C4|Q6K6C4_ORYSJ Os02g0815200 protein OS=Oryza sativa subs... 86 1e-15
tr|A2XAZ0|A2XAZ0_ORYSI Putative uncharacterized protein OS=Oryza... 86 1e-15
tr|A7PT43|A7PT43_VITVI Chromosome chr8 scaffold_29, whole genome... 86 2e-15
tr|A9SSU3|A9SSU3_PHYPA Predicted protein OS=Physcomitrella paten... 85 3e-15
tr|A9TLQ3|A9TLQ3_PHYPA Predicted protein OS=Physcomitrella paten... 85 3e-15
tr|A9P1T0|A9P1T0_PICSI Putative uncharacterized protein OS=Picea... 85 3e-15
tr|A9NNN9|A9NNN9_PICSI Putative uncharacterized protein OS=Picea... 85 3e-15
tr|O04240|O04240_VICFA RNA- or ssDNA-binding protein (Fragment) ... 84 6e-15
tr|Q8L941|Q8L941_ARATH Putative RNA-binding protein OS=Arabidops... 84 8e-15
tr|Q7GA50|Q7GA50_ARATH Putative RNA-binding protein OS=Arabidops... 84 8e-15
tr|A9TLQ5|A9TLQ5_PHYPA Predicted protein (Fragment) OS=Physcomit... 83 1e-14
tr|B6SS58|B6SS58_MAIZE Ribonucleoprotein OS=Zea mays PE=2 SV=1 82 3e-14
tr|B4FMY7|B4FMY7_MAIZE Putative uncharacterized protein OS=Zea m... 82 3e-14
tr|A9NTU4|A9NTU4_PICSI Putative uncharacterized protein OS=Picea... 82 3e-14
tr|Q41367|Q41367_SPIOL 24 kDa RNA binding protein (Fragment) OS=... 81 4e-14

>tr|A5BDH4|A5BDH4_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_026573 PE=4 SV=1
Length = 355

Score = 96.7 bits (239), Expect = 9e-19
Identities = 43/64 (67%), Positives = 53/64 (82%)
Frame = +3

Query: 393 KLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEK 572
KLY GNLP+SC+S LAG+ Q GS ++VEV+YD+++GRSRGF FVTMSSVEDCN IE
Sbjct: 67 KLYFGNLPYSCDSAHLAGIIQNYGSPELVEVLYDRDTGRSRGFAFVTMSSVEDCNAVIEN 126

Query: 573 LDGA 584
LDG+
Sbjct: 127 LDGS 130



Score = 47.0 bits (110), Expect = 8e-04
Identities = 23/46 (50%), Positives = 30/46 (65%)
Frame = +3

Query: 369 PPFGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESG 506
P + E+ KL+VGNL WS SE L VFQ+ G+V V+YD E+G
Sbjct: 150 PLYPETEYKLFVGNLSWSVTSESLNQVFQEYGNVIGARVLYDGETG 195


>tr|A9SLJ0|A9SLJ0_PHYPA Predicted protein (Fragment)
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_47163 PE=4 SV=1
Length = 192

Score = 95.5 bits (236), Expect = 2e-18
Identities = 42/63 (66%), Positives = 53/63 (84%)
Frame = +3

Query: 393 KLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEK 572
KLY+GNLPW C+S +LAG+ Q+ GSV++VEVIYD+ESGRSRGF FVTM++ ED IE+
Sbjct: 1 KLYIGNLPWQCDSAQLAGICQEFGSVELVEVIYDQESGRSRGFAFVTMATQEDAENVIER 60

Query: 573 LDG 581
LDG
Sbjct: 61 LDG 63



Score = 70.1 bits (170), Expect = 9e-11
Identities = 33/64 (51%), Positives = 43/64 (67%)
Frame = +3

Query: 393 KLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEK 572
K++VGNL W ++ L +F G V V+YD+ESGRSRGFGFVT S V + + AI+
Sbjct: 108 KVFVGNLSWGVDNGALQELFSDYGKVVDARVVYDRESGRSRGFGFVTYSDVSEVDAAIDS 167

Query: 573 LDGA 584
LDGA
Sbjct: 168 LDGA 171


>tr|A7NXI6|A7NXI6_VITVI Chromosome chr5 scaffold_2, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00020349001
PE=4 SV=1
Length = 283

Score = 95.5 bits (236), Expect = 2e-18
Identities = 42/64 (65%), Positives = 54/64 (84%)
Frame = +3

Query: 393 KLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEK 572
KLY GNLP+SC+S +LAG+ Q GS ++VEV+Y++++GRSRGF FVTMSSVEDCN IE
Sbjct: 112 KLYFGNLPYSCDSAQLAGIIQNYGSPELVEVLYNRDTGRSRGFAFVTMSSVEDCNAVIEN 171

Query: 573 LDGA 584
LDG+
Sbjct: 172 LDGS 175



Score = 73.2 bits (178), Expect = 1e-11
Identities = 36/71 (50%), Positives = 49/71 (69%)
Frame = +3

Query: 369 PPFGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVE 548
P + E+ KL+VGNL WS SE L VFQ+ G+V V+YD E+GRSRG+GFV S+
Sbjct: 195 PLYPETEYKLFVGNLSWSVTSESLNQVFQEYGNVIGARVLYDGETGRSRGYGFVCYSTKA 254

Query: 549 DCNTAIEKLDG 581
+ +TA+E L+G
Sbjct: 255 EMDTALESLNG 265


>tr|B4FLX0|B4FLX0_MAIZE Putative uncharacterized protein OS=Zea mays
PE=2 SV=1
Length = 287

Score = 91.3 bits (225), Expect = 4e-17
Identities = 43/82 (52%), Positives = 59/82 (71%), Gaps = 2/82 (2%)
Frame = +3

Query: 345 GPSFRDNGPPFGESVA--KLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRG 518
G S D+GP S KLY GNLP++C+S +LAG+ Q+ S +MVEV+YD+ +GRSRG
Sbjct: 99 GASSDDSGPSVAASTTTTKLYFGNLPYNCDSAQLAGIVQEYASPEMVEVLYDRTTGRSRG 158

Query: 519 FGFVTMSSVEDCNTAIEKLDGA 584
F FVTM++V+DC I+ LDG+
Sbjct: 159 FAFVTMTTVQDCELVIKNLDGS 180



Score = 64.7 bits (156), Expect = 4e-09
Identities = 34/81 (41%), Positives = 49/81 (60%), Gaps = 4/81 (4%)
Frame = +3

Query: 351 SFRDNGPP----FGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRG 518
+F D P + E+ KL+VGNL W+ SE L F + G+V V+YD E+GRSRG
Sbjct: 190 NFADRPKPKQALYPETEHKLFVGNLSWTVTSEMLTEAFGRCGTVVGARVLYDGETGRSRG 249

Query: 519 FGFVTMSSVEDCNTAIEKLDG 581
+GFV S+ E+ + A+ L+G
Sbjct: 250 YGFVCYSTREEMDEALSSLNG 270


>tr|B6U471|B6U471_MAIZE Ribonucleoprotein A OS=Zea mays PE=2 SV=1
Length = 268

Score = 89.7 bits (221), Expect = 1e-16
Identities = 42/74 (56%), Positives = 58/74 (78%)
Frame = +3

Query: 360 DNGPPFGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMS 539
D F E + KL+VGNLP+S +S +LAG+F++ GSV+MVEV+YD+ +GRSRGFGFVTMS
Sbjct: 70 DGSEEFSEDL-KLFVGNLPFSVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMS 128

Query: 540 SVEDCNTAIEKLDG 581
S E+ A+E+ +G
Sbjct: 129 SAEEAEAAVEQFNG 142



Score = 75.1 bits (183), Expect = 3e-12
Identities = 36/72 (50%), Positives = 47/72 (65%)
Frame = +3

Query: 366 GPPFGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSV 545
G F +S K+YVGNL W ++ L +F + G V +VIYD++SGRSRGFGFVT S
Sbjct: 176 GGGFVDSANKVYVGNLAWGVDNSTLENLFSEQGQVLDAKVIYDRDSGRSRGFGFVTYGSA 235

Query: 546 EDCNTAIEKLDG 581
++ N AI LDG
Sbjct: 236 QEVNNAISNLDG 247


>tr|A9PFU9|A9PFU9_POPTR Putative uncharacterized protein OS=Populus
trichocarpa PE=2 SV=1
Length = 279

Score = 89.7 bits (221), Expect = 1e-16
Identities = 40/64 (62%), Positives = 53/64 (82%)
Frame = +3

Query: 393 KLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEK 572
KLY GNLP++ +S +LAG+ Q+ G+ +MVEV+Y +E+GRSRGF FVTMSS+EDC T IE
Sbjct: 108 KLYFGNLPYNVDSAQLAGMIQEYGTPEMVEVLYHRETGRSRGFAFVTMSSIEDCETVIEN 167

Query: 573 LDGA 584
LDG+
Sbjct: 168 LDGS 171



Score = 71.6 bits (174), Expect = 3e-11
Identities = 33/71 (46%), Positives = 48/71 (67%)
Frame = +3

Query: 369 PPFGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVE 548
P + E+ KL++GNL WS SE L FQ+ G+V V+YD E+G+SRG+GFV S+ E
Sbjct: 191 PLYPETEYKLFIGNLSWSVTSESLTQAFQEYGNVVGARVLYDGETGKSRGYGFVCYSTKE 250

Query: 549 DCNTAIEKLDG 581
+ TA++ L+G
Sbjct: 251 ELETALQSLNG 261


>tr|B6T531|B6T531_MAIZE Ribonucleoprotein A OS=Zea mays PE=2 SV=1
Length = 264

Score = 89.4 bits (220), Expect = 1e-16
Identities = 42/75 (56%), Positives = 60/75 (80%)
Frame = +3

Query: 357 RDNGPPFGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTM 536
R G F + + +++VGNLP+S +S +LAG+F++ GSV+MVEVIYDK +GRSRGFGFVTM
Sbjct: 73 RSGGDEFSDDL-RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTM 131

Query: 537 SSVEDCNTAIEKLDG 581
SSVE+ A+++ +G
Sbjct: 132 SSVEEVEVAVDQFNG 146



Score = 74.3 bits (181), Expect = 5e-12
Identities = 47/123 (38%), Positives = 60/123 (48%), Gaps = 6/123 (4%)
Frame = +3

Query: 234 GYGVVGQAHAELSVEEVQALXXXXXXXXXXXXXXXXNG--PSFRDNGPPFGE----SVAK 395
G+G V + SVEEV+ N P RD P + +
Sbjct: 125 GFGFVTMS----SVEEVEVAVDQFNGYVLDGRSLRVNSGPPPPRDRSSPSPQRPRGDANR 180

Query: 396 LYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEKL 575
+YVGNL W ++ LA +F + G V +IYD+ESGRSRGFGFVT S E+ AI L
Sbjct: 181 VYVGNLSWGVDNSALANLFSEQGEVLEARIIYDRESGRSRGFGFVTYGSAEEVENAISNL 240

Query: 576 DGA 584
DGA
Sbjct: 241 DGA 243


>tr|Q8S7G2|Q8S7G2_ORYSA Putative ribonucleoprotein OS=Oryza sativa
GN=OSJNBb0048D20.12 PE=4 SV=1
Length = 265

Score = 88.6 bits (218), Expect = 2e-16
Identities = 42/72 (58%), Positives = 59/72 (81%)
Frame = +3

Query: 366 GPPFGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSV 545
G F + + +++VGNLP+S +S +LAG+F++ GSV+MVEVIYDK +GRSRGFGFVTMSSV
Sbjct: 79 GEEFSDDL-RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSSV 137

Query: 546 EDCNTAIEKLDG 581
E+ A+E+ +G
Sbjct: 138 EEVEAAVEQFNG 149



Score = 73.2 bits (178), Expect = 1e-11
Identities = 37/71 (52%), Positives = 47/71 (66%)
Frame = +3

Query: 372 PFGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVED 551
P GE+ ++YVGNL W ++ LA +F G V +VIYD+ESGRSRGFGFVT S E+
Sbjct: 175 PRGEA-NRVYVGNLSWGVDNAALANLFSGEGEVLEAKVIYDRESGRSRGFGFVTYGSAEE 233

Query: 552 CNTAIEKLDGA 584
A+ LDGA
Sbjct: 234 VENAVSNLDGA 244


>tr|Q41124|Q41124_PHAVU Chloroplast RNA binding protein OS=Phaseolus
vulgaris GN=RNP1 PE=2 SV=1
Length = 287

Score = 88.6 bits (218), Expect = 2e-16
Identities = 38/63 (60%), Positives = 51/63 (80%)
Frame = +3

Query: 393 KLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEK 572
KLY GNLP+S +S +LAG+ Q GS +++EV+YD+++G+SRGF FVTMS +EDCN IE
Sbjct: 114 KLYFGNLPYSVDSAKLAGLIQDYGSAELIEVLYDRDTGKSRGFAFVTMSCIEDCNAVIEN 173

Query: 573 LDG 581
LDG
Sbjct: 174 LDG 176



Score = 65.1 bits (157), Expect = 3e-09
Identities = 32/70 (45%), Positives = 45/70 (64%)
Frame = +3

Query: 369 PPFGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVE 548
P + E+ KL+VGNL WS +E L FQ+ G+V V+YD E+GRSRG+GFV S+ E
Sbjct: 197 PLYPETEHKLFVGNLSWSVTNEILTQAFQEYGTVVGARVLYDGETGRSRGYGFVCFSTKE 256

Query: 549 DCNTAIEKLD 578
+ A+ L+
Sbjct: 257 EMEAALGALN 266


>tr|Q10KP0|Q10KP0_ORYSJ Os03g0376600 protein OS=Oryza sativa subsp.
japonica GN=Os03g0376600 PE=2 SV=1
Length = 265

Score = 88.6 bits (218), Expect = 2e-16
Identities = 42/72 (58%), Positives = 59/72 (81%)
Frame = +3

Query: 366 GPPFGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSV 545
G F + + +++VGNLP+S +S +LAG+F++ GSV+MVEVIYDK +GRSRGFGFVTMSSV
Sbjct: 79 GEEFSDDL-RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSSV 137

Query: 546 EDCNTAIEKLDG 581
E+ A+E+ +G
Sbjct: 138 EEVEAAVEQFNG 149



Score = 73.2 bits (178), Expect = 1e-11
Identities = 37/71 (52%), Positives = 47/71 (66%)
Frame = +3

Query: 372 PFGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVED 551
P GE+ ++YVGNL W ++ LA +F G V +VIYD+ESGRSRGFGFVT S E+
Sbjct: 175 PRGEA-NRVYVGNLSWGVDNAALANLFSGEGEVLEAKVIYDRESGRSRGFGFVTYGSAEE 233

Query: 552 CNTAIEKLDGA 584
A+ LDGA
Sbjct: 234 VENAVSNLDGA 244