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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK954530
Clone id TST39A01NGRL0020_K23
Library
Length 583
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0020_K23. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
GTCGACCAGTATGCCACAGATAGCGATTTTGCAGACGTTTTCACACGGATACGGGATGGG
GAGACAATAGCGGGATATTCCATTCGGGATGGCTACTTGATGAGAAAAACCATGTTGTGC
GTTACACAGCCGTTGAGGGAAAAGGTTATGATTGAATGCCATTGTCCACCTTTTACGGGT
CACCGCGGCATTGCTACCACCATGAAAGGGGTAGAGAGATACTTCTTTTGAACGAGACTC
AAAAAGGATGTGGAAGAGTTTGTGCGCAGTTGCTTAGTTTGCCAGAAGGTCAAGTTTGAC
AGGCATAAAGCACAGGGATTGTTACAGCCTTTACCCATACCCACCCGCCCCTGGGAAAGT
ATTGCAATGGATTTCATTTTTGATATCCCGAGAACATAGAGTGGTCACGATGGTATCTGG
AATGTTATTGACAAATTTAGCAAACAGGCTCATTTCATTCCAGTGAAGGAAACAGTCAAG
CCGGATCACTTAGCGAGGCTGTTTGTGGCTCAGATTTTCAGATTTACATGGCATGCCTGA
GATGATTGTCTCCGACAGAGACCCCAGATTTACGAGTTTGTTT
■■Homology search results ■■ -
sp_hit_id Q99315
Definition sp|Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae
Align length 151
Score (bit) 90.5
E-value 3.0e-19
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK954530|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0020_K23, 5'
         (583 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein OS=Sa...    91   3e-19
sp|Q7LHG5|YI31B_YEAST Transposon Ty3-I Gag-Pol polyprotein OS=Sa...    91   3e-19
sp|Q9UR07|RTF23_SCHPO Retrotransposable element Tf2 155 kDa prot...    87   6e-17
sp|Q9C0R2|RTF22_SCHPO Retrotransposable element Tf2 155 kDa prot...    87   6e-17
sp|Q05654|RTF21_SCHPO Retrotransposable element Tf2 155 kDa prot...    87   6e-17
sp|P10394|POL4_DROME Retrovirus-related Pol polyprotein from tra...    53   1e-06
sp|Q5DTZ0|K1305_MOUSE Integrase catalytic domain-containing prot...    49   2e-05
sp|Q8K259|GIN1_MOUSE Gypsy retrotransposon integrase-like protei...    47   7e-05
sp|Q66H30|GIN1_RAT Gypsy retrotransposon integrase-like protein ...    46   1e-04
sp|Q9P2P1|K1305_HUMAN Integrase catalytic domain-containing prot...    46   2e-04
sp|P10401|POLY_DROME Retrovirus-related Pol polyprotein from tra...    45   2e-04
sp|Q8I7P9|POL5_DROME Retrovirus-related Pol polyprotein from tra...    45   2e-04
sp|Q4R6I1|GIN1_MACFA Gypsy retrotransposon integrase-like protei...    44   5e-04
sp|Q5RBK0|GIN1_PONAB Gypsy retrotransposon integrase-like protei...    44   6e-04
sp|Q09575|YRD6_CAEEL Uncharacterized protein K02A2.6 OS=Caenorha...    43   0.001
sp|Q9NXP7|GIN1_HUMAN Gypsy retrotransposon integrase-like protei...    42   0.002
sp|A4FUB7|GIN1_BOVIN Gypsy retrotransposon integrase-like protei...    42   0.002
sp|P23074|POL_SFV1 Pro-Pol polyprotein OS=Simian foamy virus typ...    40   0.007
sp|O93209|POL_FFV Pro-Pol polyprotein OS=Feline foamy virus GN=p...    39   0.019
sp|P27401|POL_SFV3L Pro-Pol polyprotein OS=Simian foamy virus ty...    37   0.094
sp|P14350|POL_FOAMV Pro-Pol polyprotein OS=Human spumaretrovirus...    35   0.36 
sp|Q4WC37|PFA4_ASPFU Palmitoyltransferase pfa4 OS=Aspergillus fu...    33   1.0  
sp|P01406|TX54_DENJA Toxin S5C4 OS=Dendroaspis jamesoni kaimosae...    31   5.2  
sp|Q8AA75|PYRG_BACTN CTP synthase OS=Bacteroides thetaiotaomicro...    30   6.7  
sp|Q5XK91|FBCDB_XENLA Fibrinogen C domain-containing protein 1-B...    30   8.7  
sp|Q6AX44|FBCDA_XENLA Fibrinogen C domain-containing protein 1-A...    30   8.7  
sp|Q0P4P2|FBCD1_XENTR Fibrinogen C domain-containing protein 1 O...    30   8.7  

>sp|Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein
            OS=Saccharomyces cerevisiae GN=TY3B-G PE=1 SV=3
          Length = 1547

 Score = 90.5 bits (223), Expect(2) = 3e-19
 Identities = 50/151 (33%), Positives = 81/151 (53%), Gaps = 1/151 (0%)
 Frame = +1

Query: 76   YSIRDGYLMRKTMLCVTQPLREKVMIECHCPP-FTGHRGIATTMKGVERYFF*TRLKKDV 252
            YS+ D  +  +  L V    +  VM   H    F GH G+  T+  +   ++  +L+  +
Sbjct: 1076 YSLEDEMIYYQDRLVVPIKQQNAVMRLYHDHTLFGGHFGVTVTLAKISPIYYWPKLQHSI 1135

Query: 253  EEFVRSCLVCQKVKFDRHKAQGLLQPLPIPTRPWESIAMDFIFDIPRT*SGHDGIWNVID 432
             +++R+C+ CQ +K  R +  GLLQPLPI    W  I+MDF+  +P T +  + I  V+D
Sbjct: 1136 IQYIRTCVQCQLIKSHRPRLHGLLQPLPIAEGRWLDISMDFVTGLPPTSNNLNMILVVVD 1195

Query: 433  KFSKQAHFIPVKETVKPDHLARLFVAQIFRF 525
            +FSK+AHFI  ++T+    L  L    IF +
Sbjct: 1196 RFSKRAHFIATRKTLDATQLIDLLFRYIFSY 1226



 Score = 25.4 bits (54), Expect(2) = 3e-19
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = +2

Query: 527  HGMPEMIVSDRDPRFTS 577
            HG P  I SDRD R T+
Sbjct: 1227 HGFPRTITSDRDVRMTA 1243


>sp|Q7LHG5|YI31B_YEAST Transposon Ty3-I Gag-Pol polyprotein
            OS=Saccharomyces cerevisiae GN=TY3B-I PE=3 SV=2
          Length = 1498

 Score = 90.5 bits (223), Expect(2) = 3e-19
 Identities = 50/151 (33%), Positives = 81/151 (53%), Gaps = 1/151 (0%)
 Frame = +1

Query: 76   YSIRDGYLMRKTMLCVTQPLREKVMIECHCPP-FTGHRGIATTMKGVERYFF*TRLKKDV 252
            YS+ D  +  +  L V    +  VM   H    F GH G+  T+  +   ++  +L+  +
Sbjct: 1102 YSLEDEMIYYQDRLVVPIKQQNAVMRLYHDHTLFGGHFGVTVTLAKISPIYYWPKLQHSI 1161

Query: 253  EEFVRSCLVCQKVKFDRHKAQGLLQPLPIPTRPWESIAMDFIFDIPRT*SGHDGIWNVID 432
             +++R+C+ CQ +K  R +  GLLQPLPI    W  I+MDF+  +P T +  + I  V+D
Sbjct: 1162 IQYIRTCVQCQLIKSHRPRLHGLLQPLPIAEGRWLDISMDFVTGLPPTSNNLNMILVVVD 1221

Query: 433  KFSKQAHFIPVKETVKPDHLARLFVAQIFRF 525
            +FSK+AHFI  ++T+    L  L    IF +
Sbjct: 1222 RFSKRAHFIATRKTLDATQLIDLLFRYIFSY 1252



 Score = 25.4 bits (54), Expect(2) = 3e-19
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = +2

Query: 527  HGMPEMIVSDRDPRFTS 577
            HG P  I SDRD R T+
Sbjct: 1253 HGFPRTITSDRDVRMTA 1269


>sp|Q9UR07|RTF23_SCHPO Retrotransposable element Tf2 155 kDa protein
            type 3 OS=Schizosaccharomyces pombe GN=Tf2-11 PE=4 SV=1
          Length = 1333

 Score = 87.0 bits (214), Expect = 6e-17
 Identities = 51/178 (28%), Positives = 91/178 (51%), Gaps = 3/178 (1%)
 Frame = +1

Query: 1    VDQYATDSDFADVFTRIRDGETIAGYSIRDGYLMR---KTMLCVTQPLREKVMIECHCPP 171
            V +Y  D+   ++     D        ++DG L+    + +L     L   ++ + H   
Sbjct: 865  VTEYTNDTKLLNLLNN-EDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEG 923

Query: 172  FTGHRGIATTMKGVERYFF*TRLKKDVEEFVRSCLVCQKVKFDRHKAQGLLQPLPIPTRP 351
               H GI      + R F    ++K ++E+V++C  CQ  K   HK  G LQP+P   RP
Sbjct: 924  KLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERP 983

Query: 352  WESIAMDFIFDIPRT*SGHDGIWNVIDKFSKQAHFIPVKETVKPDHLARLFVAQIFRF 525
            WES++MDFI  +P + SG++ ++ V+D+FSK A  +P  +++  +  AR+F  ++  +
Sbjct: 984  WESLSMDFITALPES-SGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAY 1040


>sp|Q9C0R2|RTF22_SCHPO Retrotransposable element Tf2 155 kDa protein
            type 2 OS=Schizosaccharomyces pombe GN=Tf2-7 PE=2 SV=1
          Length = 1333

 Score = 87.0 bits (214), Expect = 6e-17
 Identities = 51/178 (28%), Positives = 91/178 (51%), Gaps = 3/178 (1%)
 Frame = +1

Query: 1    VDQYATDSDFADVFTRIRDGETIAGYSIRDGYLMR---KTMLCVTQPLREKVMIECHCPP 171
            V +Y  D+   ++     D        ++DG L+    + +L     L   ++ + H   
Sbjct: 865  VTEYTNDTKLLNLLNN-EDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEG 923

Query: 172  FTGHRGIATTMKGVERYFF*TRLKKDVEEFVRSCLVCQKVKFDRHKAQGLLQPLPIPTRP 351
               H GI      + R F    ++K ++E+V++C  CQ  K   HK  G LQP+P   RP
Sbjct: 924  KLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERP 983

Query: 352  WESIAMDFIFDIPRT*SGHDGIWNVIDKFSKQAHFIPVKETVKPDHLARLFVAQIFRF 525
            WES++MDFI  +P + SG++ ++ V+D+FSK A  +P  +++  +  AR+F  ++  +
Sbjct: 984  WESLSMDFITALPES-SGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAY 1040


>sp|Q05654|RTF21_SCHPO Retrotransposable element Tf2 155 kDa protein
            type 1 OS=Schizosaccharomyces pombe GN=Tf2-1 PE=2 SV=1
          Length = 1333

 Score = 87.0 bits (214), Expect = 6e-17
 Identities = 51/178 (28%), Positives = 91/178 (51%), Gaps = 3/178 (1%)
 Frame = +1

Query: 1    VDQYATDSDFADVFTRIRDGETIAGYSIRDGYLMR---KTMLCVTQPLREKVMIECHCPP 171
            V +Y  D+   ++     D        ++DG L+    + +L     L   ++ + H   
Sbjct: 865  VTEYTNDTKLLNLLNN-EDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEG 923

Query: 172  FTGHRGIATTMKGVERYFF*TRLKKDVEEFVRSCLVCQKVKFDRHKAQGLLQPLPIPTRP 351
               H GI      + R F    ++K ++E+V++C  CQ  K   HK  G LQP+P   RP
Sbjct: 924  KLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERP 983

Query: 352  WESIAMDFIFDIPRT*SGHDGIWNVIDKFSKQAHFIPVKETVKPDHLARLFVAQIFRF 525
            WES++MDFI  +P + SG++ ++ V+D+FSK A  +P  +++  +  AR+F  ++  +
Sbjct: 984  WESLSMDFITALPES-SGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAY 1040


>sp|P10394|POL4_DROME Retrovirus-related Pol polyprotein from
            transposon 412 OS=Drosophila melanogaster GN=POL PE=4
            SV=1
          Length = 1237

 Score = 52.8 bits (125), Expect = 1e-06
 Identities = 31/114 (27%), Positives = 58/114 (50%), Gaps = 4/114 (3%)
 Frame = +1

Query: 136  REKVMIECHCPPFTG-HRGIATTMKGVERYFF*TRLKKDVEEFVRSCLVCQKVKFDRHKA 312
            +E ++   H  P  G H GI  T+  V+R+++   + K ++E+VR C  CQK K  +H  
Sbjct: 893  KEAILSTLHDDPIQGGHTGITKTLAKVKRHYYWKNMSKYIKEYVRKCQKCQKAKTTKHTK 952

Query: 313  QGLLQPLPI---PTRPWESIAMDFIFDIPRT*SGHDGIWNVIDKFSKQAHFIPV 465
                 P+ I   P   ++ + +D I  +P++ +G++    +I   +K    IP+
Sbjct: 953  ----TPMTITETPEHAFDRVVVDTIGPLPKSENGNEYAVTLICDLTKYLVAIPI 1002


>sp|Q5DTZ0|K1305_MOUSE Integrase catalytic domain-containing protein
            KIAA1305 OS=Mus musculus GN=Kiaa1305 PE=1 SV=2
          Length = 1840

 Score = 48.9 bits (115), Expect = 2e-05
 Identities = 38/169 (22%), Positives = 72/169 (42%), Gaps = 18/169 (10%)
 Frame = +1

Query: 16   TDSDFADVFTRIRDGETIAGYSI------------RDGYLMRK-----TMLCVTQPLREK 144
            +D+  AD+  +++ G+ ++G S               G LM K      +  V + LR  
Sbjct: 1427 SDTTLADIIAKLQAGQKLSGPSPFSSAFNSLSLDQDSGLLMFKGERHPRVWVVPRQLRRD 1486

Query: 145  VMIECHCPPFTGHRGIATTMKGVERYFF*TRLKKDVEEFVRSCLVCQKVKFDRHKAQGLL 324
            ++   H  P   H+G+  T K V    +   ++  V ++ RSCL C        + + + 
Sbjct: 1487 LIFSVHDSPIGEHQGLEDTYKTVRLLGWWPGMQDHVRDYCRSCLFCIPRNLIGGELKVIE 1546

Query: 325  QPLPI-PTRPWESIAMDFIFDIPRT*SGHDGIWNVIDKFSKQAHFIPVK 468
             P P+  T PW S+ ++ +  +  +  GH  +  V D  ++     P+K
Sbjct: 1547 SPWPLRSTAPWSSLQIEVVGPVTVSEEGHKHVLIVADANTRWVEAFPLK 1595


>sp|Q8K259|GIN1_MOUSE Gypsy retrotransposon integrase-like protein 1
           OS=Mus musculus GN=Gin1 PE=2 SV=2
          Length = 518

 Score = 47.0 bits (110), Expect = 7e-05
 Identities = 32/118 (27%), Positives = 57/118 (48%)
 Frame = +1

Query: 112 MLCVTQPLREKVMIECHCPPFTGHRGIATTMKGVERYFF*TRLKKDVEEFVRSCLVCQKV 291
           ++ V++  ++KV+ ECH      H GI+ T+  VE  ++ T +  DV+++V +C  CQ  
Sbjct: 62  LVVVSEEEKKKVLRECHENGPGVHHGISRTLTLVESGYYWTSVTNDVKQWVYACQHCQVA 121

Query: 292 KFDRHKAQGLLQPLPIPTRPWESIAMDFIFDIPRT*SGHDGIWNVIDKFSKQAHFIPV 465
           K     A    Q LP+   PW  + +D +     +   H     + D F+K    +P+
Sbjct: 122 KNTVIVAP--QQHLPMVGNPWSVVTVDLMGPFHTSNRSHVYAIIMTDLFTKWVMILPL 177


>sp|Q66H30|GIN1_RAT Gypsy retrotransposon integrase-like protein 1
           OS=Rattus norvegicus GN=GIN1 PE=2 SV=1
          Length = 518

 Score = 46.2 bits (108), Expect = 1e-04
 Identities = 31/118 (26%), Positives = 56/118 (47%)
 Frame = +1

Query: 112 MLCVTQPLREKVMIECHCPPFTGHRGIATTMKGVERYFF*TRLKKDVEEFVRSCLVCQKV 291
           ++ V++  ++KV+ ECH      H GI+ T+  VE  ++ T +  DV+++V +C  CQ  
Sbjct: 62  LVVVSEEEKKKVLRECHENGPGVHHGISRTLTLVESSYYWTSVTNDVKQWVYACQHCQVA 121

Query: 292 KFDRHKAQGLLQPLPIPTRPWESIAMDFIFDIPRT*SGHDGIWNVIDKFSKQAHFIPV 465
           K     A    Q L +   PW  + +D +     +   H     + D F+K    +P+
Sbjct: 122 KSTVIVAP--QQHLSVVGNPWSVVTVDLMGPFHTSSRSHVYAMIMTDLFTKWVMILPL 177


>sp|Q9P2P1|K1305_HUMAN Integrase catalytic domain-containing protein
            KIAA1305 OS=Homo sapiens GN=KIAA1305 PE=2 SV=3
          Length = 1898

 Score = 45.8 bits (107), Expect = 2e-04
 Identities = 37/169 (21%), Positives = 71/169 (42%), Gaps = 18/169 (10%)
 Frame = +1

Query: 16   TDSDFADVFTRIRDGETIAGYSI------------RDGYLMRK-----TMLCVTQPLREK 144
            +DS  AD+  R++ G+ ++G S               G LM K      +  V   LR  
Sbjct: 1484 SDSTLADIIARLQAGQKLSGSSPFSSAFNSLSLDKESGLLMFKGDKKPRVWVVPTQLRRD 1543

Query: 145  VMIECHCPPFTGHRGIATTMKGVERYFF*TRLKKDVEEFVRSCLVCQKVKFDRHKAQGLL 324
            ++   H  P   H+    T K +    +   +++ V+++ RSCL C        + + + 
Sbjct: 1544 LIFSVHDIPLGAHQRPEETYKKLRLLGWWPGMQEHVKDYCRSCLFCIPRNLIGSELKVIE 1603

Query: 325  QPLPI-PTRPWESIAMDFIFDIPRT*SGHDGIWNVIDKFSKQAHFIPVK 468
             P P+  T PW ++ ++ +  +  +  GH  +  V D  ++     P+K
Sbjct: 1604 SPWPLRSTAPWSNLQIEVVGPVTISEEGHKHVLIVADPNTRWVEAFPLK 1652
tr_hit_id Q94I07
Definition tr|Q94I07|Q94I07_ORYSA Putative retroelement OS=Oryza sativa
Align length 174
Score (bit) 141.0
E-value 6.0e-35
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK954530|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0020_K23, 5'
         (583 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q94I07|Q94I07_ORYSA Putative retroelement OS=Oryza sativa GN=...   141   6e-35
tr|Q7XG23|Q7XG23_ORYSJ Retrotransposon protein, putative, Ty3-gy...   141   6e-35
tr|Q6UUM9|Q6UUM9_ORYSJ Putative gag-pol polyprotein OS=Oryza sat...   140   2e-34
tr|Q93WG4|Q93WG4_ORYSA Putative retroelement OS=Oryza sativa GN=...   136   2e-33
tr|Q7XFI5|Q7XFI5_ORYSJ Retrotransposon protein, putative, Ty3-gy...   136   2e-33
tr|Q94BM2|Q94BM2_HORVU Gag-pol polyprotein OS=Hordeum vulgare PE...   136   3e-33
tr|Q94BM1|Q94BM1_HORVU Gag-pol polyprotein OS=Hordeum vulgare PE...   136   3e-33
tr|Q10IG2|Q10IG2_ORYSJ Retrotransposon protein, putative, Ty3-gy...   135   4e-33
tr|Q8L7J3|Q8L7J3_MAIZE Gag-pol polyprotein OS=Zea mays PE=4 SV=1      134   7e-33
tr|Q6UUJ1|Q6UUJ1_ORYSJ Putative gag-pol polyprotein (Putative po...   134   7e-33
tr|B5G4Y0|B5G4Y0_TRIMO Putative gag-pol polyprotein OS=Triticum ...   133   2e-32
tr|Q2MCK3|Q2MCK3_CITSI Polyprotein (Fragment) OS=Citrus sinensis...   130   2e-32
tr|Q6UUF6|Q6UUF6_ORYSJ Putative gag-pol polyprotein OS=Oryza sat...   132   4e-32
tr|Q8LM78|Q8LM78_ORYSJ Putative retroelement OS=Oryza sativa sub...   132   8e-32
tr|Q0DJL7|Q0DJL7_ORYSJ Os05g0263200 protein OS=Oryza sativa subs...   128   1e-31
tr|A4K7M3|A4K7M3_ORYSJ Putative polyprotein OS=Oryza sativa subs...   128   1e-31
tr|Q9SLQ0|Q9SLQ0_ORYSI Gag-pol polyprotein (Fragment) OS=Oryza s...   130   1e-31
tr|Q6ATA5|Q6ATA5_ORYSJ Putative uncharacterized protein OSJNBa00...   128   1e-31
tr|Q0J0N1|Q0J0N1_ORYSJ Os09g0491900 protein OS=Oryza sativa subs...   127   2e-31
tr|Q5NRP4|Q5NRP4_SOLDE Putative gag-pol polyprotein, identical O...   128   5e-31
tr|Q5NRP7|Q5NRP7_SOLDE Putative gag-pol polyprotein, identical O...   127   8e-31
tr|Q9LQH2|Q9LQH2_ARATH F15O4.13 OS=Arabidopsis thaliana PE=4 SV=1     123   2e-30
tr|A5BU14|A5BU14_VITVI Putative uncharacterized protein OS=Vitis...   129   3e-30
tr|Q3C0I2|Q3C0I2_LOTJA Putative uncharacterized protein OS=Lotus...   122   3e-30
tr|Q3C0I1|Q3C0I1_LOTJA Putative uncharacterized protein OS=Lotus...   122   3e-30
tr|Q3C0H8|Q3C0H8_LOTJA Putative uncharacterized protein OS=Lotus...   122   3e-30
tr|Q7XKZ2|Q7XKZ2_ORYSJ OSJNBa0022F16.12 protein OS=Oryza sativa ...   126   3e-30
tr|Q7XS92|Q7XS92_ORYSJ OSJNBa0074B10.8 protein OS=Oryza sativa s...   125   5e-30
tr|Q7XWF6|Q7XWF6_ORYSJ OSJNBb0012A12.12 protein OS=Oryza sativa ...   124   1e-29
tr|Q2QRE1|Q2QRE1_ORYSJ Retrotransposon protein, putative, Ty3-gy...   124   1e-29

>tr|Q94I07|Q94I07_ORYSA Putative retroelement OS=Oryza sativa
            GN=OSJNBa0034E23.18 PE=4 SV=1
          Length = 2447

 Score =  141 bits (356), Expect(2) = 6e-35
 Identities = 74/174 (42%), Positives = 99/174 (56%), Gaps = 1/174 (0%)
 Frame = +1

Query: 4    DQYATDSDFADVFTRIRDGETIAGYSIRDGYLMRKTMLCV-TQPLREKVMIECHCPPFTG 180
            DQYA D+DF DV    +DG T   + I DG++ R   LC+    +R  ++ E H     G
Sbjct: 1148 DQYAHDADFNDVLLHCKDGRTWNKFVINDGFVFRANKLCIPASSVRLLLLQEAHGGGLMG 1207

Query: 181  HRGIATTMKGVERYFF*TRLKKDVEEFVRSCLVCQKVKFDRHKAQGLLQPLPIPTRPWES 360
            H G   T   +  +FF  ++++DV  FV  C  CQK K   H   GL  PLP+PT PWE 
Sbjct: 1208 HFGAKKTHDILASHFFWPQMRRDVGRFVARCATCQKAKSRLHP-HGLYMPLPVPTVPWED 1266

Query: 361  IAMDFIFDIPRT*SGHDGIWNVIDKFSKQAHFIPVKETVKPDHLARLFVAQIFR 522
            I+MDF+  +PRT  G D I+ V+D+FSK AHFIP  +T    H+A LF  +I R
Sbjct: 1267 ISMDFVLGLPRTKRGRDSIFVVVDRFSKMAHFIPCHKTDDASHIADLFFREIVR 1320



 Score = 30.4 bits (67), Expect(2) = 6e-35
 Identities = 13/20 (65%), Positives = 15/20 (75%)
 Frame = +2

Query: 524  LHGMPEMIVSDRDPRFTSLF 583
            LHG+P  IVSDRD +F S F
Sbjct: 1321 LHGVPNTIVSDRDTKFLSHF 1340



 Score =  113 bits (282), Expect(2) = 5e-27
 Identities = 57/168 (33%), Positives = 92/168 (54%), Gaps = 2/168 (1%)
 Frame = +1

Query: 19   DSDFADVFTRIRDGETIAGYSIRDGYLMRKTMLCV--TQPLREKVMIECHCPPFTGHRGI 192
            D D   +   ++ G+         G L  +  +CV   + L++ ++ E H  P++ H G 
Sbjct: 1973 DPDMRGLLKNMKQGKAAGFIEDEHGTLWNRNRVCVPDVRELKQLILQEAHESPYSIHPGS 2032

Query: 193  ATTMKGVERYFF*TRLKKDVEEFVRSCLVCQKVKFDRHKAQGLLQPLPIPTRPWESIAMD 372
                  ++  ++   +K+++ EFV  C VCQ+VK +  +  GLLQPL +P   W+ I MD
Sbjct: 2033 TKMYLDLKEKYWWVSMKREIAEFVALCDVCQRVKAEHQRPAGLLQPLQVPEWKWDEIGMD 2092

Query: 373  FIFDIPRT*SGHDGIWNVIDKFSKQAHFIPVKETVKPDHLARLFVAQI 516
            FI  +P+T  G+D IW V+D+ +K A FIPVK T   + LA L+ A+I
Sbjct: 2093 FITGLPKTQGGYDSIWVVVDRLTKVARFIPVKTTYGGNKLAELYFARI 2140



 Score = 32.3 bits (72), Expect(2) = 5e-27
 Identities = 14/24 (58%), Positives = 18/24 (75%)
 Frame = +2

Query: 512  RFSDLHGMPEMIVSDRDPRFTSLF 583
            R   LHG+P+ IVSDR+ +FTS F
Sbjct: 2139 RIVSLHGVPKKIVSDRESQFTSHF 2162


>tr|Q7XG23|Q7XG23_ORYSJ Retrotransposon protein, putative, Ty3-gypsy
            subclass OS=Oryza sativa subsp. japonica
            GN=LOC_Os10g16560 PE=4 SV=1
          Length = 2447

 Score =  141 bits (356), Expect(2) = 6e-35
 Identities = 74/174 (42%), Positives = 99/174 (56%), Gaps = 1/174 (0%)
 Frame = +1

Query: 4    DQYATDSDFADVFTRIRDGETIAGYSIRDGYLMRKTMLCV-TQPLREKVMIECHCPPFTG 180
            DQYA D+DF DV    +DG T   + I DG++ R   LC+    +R  ++ E H     G
Sbjct: 1148 DQYAHDADFNDVLLHCKDGRTWNKFVINDGFVFRANKLCIPASSVRLLLLQEAHGGGLMG 1207

Query: 181  HRGIATTMKGVERYFF*TRLKKDVEEFVRSCLVCQKVKFDRHKAQGLLQPLPIPTRPWES 360
            H G   T   +  +FF  ++++DV  FV  C  CQK K   H   GL  PLP+PT PWE 
Sbjct: 1208 HFGAKKTHDILASHFFWPQMRRDVGRFVARCATCQKAKSRLHP-HGLYMPLPVPTVPWED 1266

Query: 361  IAMDFIFDIPRT*SGHDGIWNVIDKFSKQAHFIPVKETVKPDHLARLFVAQIFR 522
            I+MDF+  +PRT  G D I+ V+D+FSK AHFIP  +T    H+A LF  +I R
Sbjct: 1267 ISMDFVLGLPRTKRGRDSIFVVVDRFSKMAHFIPCHKTDDASHIADLFFREIVR 1320



 Score = 30.4 bits (67), Expect(2) = 6e-35
 Identities = 13/20 (65%), Positives = 15/20 (75%)
 Frame = +2

Query: 524  LHGMPEMIVSDRDPRFTSLF 583
            LHG+P  IVSDRD +F S F
Sbjct: 1321 LHGVPNTIVSDRDTKFLSHF 1340



 Score =  113 bits (282), Expect(2) = 5e-27
 Identities = 57/168 (33%), Positives = 92/168 (54%), Gaps = 2/168 (1%)
 Frame = +1

Query: 19   DSDFADVFTRIRDGETIAGYSIRDGYLMRKTMLCV--TQPLREKVMIECHCPPFTGHRGI 192
            D D   +   ++ G+         G L  +  +CV   + L++ ++ E H  P++ H G 
Sbjct: 1973 DPDMRGLLKNMKQGKAAGFIEDEHGTLWNRNRVCVPDVRELKQLILQEAHESPYSIHPGS 2032

Query: 193  ATTMKGVERYFF*TRLKKDVEEFVRSCLVCQKVKFDRHKAQGLLQPLPIPTRPWESIAMD 372
                  ++  ++   +K+++ EFV  C VCQ+VK +  +  GLLQPL +P   W+ I MD
Sbjct: 2033 TKMYLDLKEKYWWVSMKREIAEFVALCDVCQRVKAEHQRPAGLLQPLQVPEWKWDEIGMD 2092

Query: 373  FIFDIPRT*SGHDGIWNVIDKFSKQAHFIPVKETVKPDHLARLFVAQI 516
            FI  +P+T  G+D IW V+D+ +K A FIPVK T   + LA L+ A+I
Sbjct: 2093 FITGLPKTQGGYDSIWVVVDRLTKVARFIPVKTTYGGNKLAELYFARI 2140



 Score = 32.3 bits (72), Expect(2) = 5e-27
 Identities = 14/24 (58%), Positives = 18/24 (75%)
 Frame = +2

Query: 512  RFSDLHGMPEMIVSDRDPRFTSLF 583
            R   LHG+P+ IVSDR+ +FTS F
Sbjct: 2139 RIVSLHGVPKKIVSDRESQFTSHF 2162


>tr|Q6UUM9|Q6UUM9_ORYSJ Putative gag-pol polyprotein OS=Oryza sativa
            subsp. japonica GN=OSJNBa0095C12.16 PE=4 SV=1
          Length = 1619

 Score =  140 bits (352), Expect(2) = 2e-34
 Identities = 73/174 (41%), Positives = 98/174 (56%), Gaps = 1/174 (0%)
 Frame = +1

Query: 4    DQYATDSDFADVFTRIRDGETIAGYSIRDGYLMRKTMLCV-TQPLREKVMIECHCPPFTG 180
            DQYA D+DF DV    +DG T   + I DG++ R   LC+    +R  ++ E H     G
Sbjct: 1127 DQYAHDADFNDVLLHCKDGRTWNKFVINDGFVFRANKLCIPASSVRLLLLQEAHGGGLMG 1186

Query: 181  HRGIATTMKGVERYFF*TRLKKDVEEFVRSCLVCQKVKFDRHKAQGLLQPLPIPTRPWES 360
            H G   T   +  +FF  ++++DV  FV  C  CQK K   H   GL  PLP+PT PWE 
Sbjct: 1187 HFGAKKTHDILASHFFWPQMRRDVGRFVARCATCQKAKSRLHP-HGLYMPLPVPTVPWED 1245

Query: 361  IAMDFIFDIPRT*SGHDGIWNVIDKFSKQAHFIPVKETVKPDHLARLFVAQIFR 522
            I+MDF+  +PRT  G D I+ V+D+FSK  HFIP  +T    H+A LF  +I R
Sbjct: 1246 ISMDFVLGLPRTKRGRDSIFVVVDRFSKMVHFIPCHKTDDASHIADLFFREIVR 1299



 Score = 30.4 bits (67), Expect(2) = 2e-34
 Identities = 13/20 (65%), Positives = 15/20 (75%)
 Frame = +2

Query: 524  LHGMPEMIVSDRDPRFTSLF 583
            LHG+P  IVSDRD +F S F
Sbjct: 1300 LHGVPNTIVSDRDTKFLSHF 1319


>tr|Q93WG4|Q93WG4_ORYSA Putative retroelement OS=Oryza sativa
            GN=OSJNBa0045C13.1 PE=4 SV=1
          Length = 1708

 Score =  136 bits (343), Expect(2) = 2e-33
 Identities = 69/174 (39%), Positives = 100/174 (57%), Gaps = 1/174 (0%)
 Frame = +1

Query: 4    DQYATDSDFADVFTRIRDGETIAGYSIRDGYLMRKTMLCV-TQPLREKVMIECHCPPFTG 180
            +QYA D DF DV    ++G T   + + +G++ R   LC+    +R  ++ E H     G
Sbjct: 1176 EQYAHDDDFKDVLLNCKEGRTWNKFVLTNGFVFRANKLCIPASSVRMLLLQEAHGGGLMG 1235

Query: 181  HRGIATTMKGVERYFF*TRLKKDVEEFVRSCLVCQKVKFDRHKAQGLLQPLPIPTRPWES 360
            H G+  T   +  +FF  ++++DVE FV  C  CQK K  R    GL  PLP+P+ PWE 
Sbjct: 1236 HFGVKKTEDILADHFFWPKMRRDVERFVARCTTCQKAKL-RLNPHGLYMPLPVPSVPWED 1294

Query: 361  IAMDFIFDIPRT*SGHDGIWNVIDKFSKQAHFIPVKETVKPDHLARLFVAQIFR 522
            I+MDF+  +PRT  G D I+ V+D+FSK AHFIP  ++    H+A LF  +I R
Sbjct: 1295 ISMDFVLGLPRTKKGRDSIFVVVDRFSKMAHFIPCHKSDDATHVADLFFREIVR 1348



 Score = 30.4 bits (67), Expect(2) = 2e-33
 Identities = 13/20 (65%), Positives = 15/20 (75%)
 Frame = +2

Query: 524  LHGMPEMIVSDRDPRFTSLF 583
            LHG+P  IVSDRD +F S F
Sbjct: 1349 LHGVPNTIVSDRDTKFLSHF 1368


>tr|Q7XFI5|Q7XFI5_ORYSJ Retrotransposon protein, putative, Ty3-gypsy
            subclass (Putative gag-pol polyprotein) OS=Oryza sativa
            subsp. japonica GN=OSJNBb0052C09.15 PE=4 SV=1
          Length = 1708

 Score =  136 bits (343), Expect(2) = 2e-33
 Identities = 69/174 (39%), Positives = 100/174 (57%), Gaps = 1/174 (0%)
 Frame = +1

Query: 4    DQYATDSDFADVFTRIRDGETIAGYSIRDGYLMRKTMLCV-TQPLREKVMIECHCPPFTG 180
            +QYA D DF DV    ++G T   + + +G++ R   LC+    +R  ++ E H     G
Sbjct: 1176 EQYAHDDDFKDVLLNCKEGRTWNKFVLTNGFVFRANKLCIPASSVRMLLLQEAHGGGLMG 1235

Query: 181  HRGIATTMKGVERYFF*TRLKKDVEEFVRSCLVCQKVKFDRHKAQGLLQPLPIPTRPWES 360
            H G+  T   +  +FF  ++++DVE FV  C  CQK K  R    GL  PLP+P+ PWE 
Sbjct: 1236 HFGVKKTEDILADHFFWPKMRRDVERFVARCTTCQKAKL-RLNPHGLYMPLPVPSVPWED 1294

Query: 361  IAMDFIFDIPRT*SGHDGIWNVIDKFSKQAHFIPVKETVKPDHLARLFVAQIFR 522
            I+MDF+  +PRT  G D I+ V+D+FSK AHFIP  ++    H+A LF  +I R
Sbjct: 1295 ISMDFVLGLPRTKKGRDSIFVVVDRFSKMAHFIPCHKSDDATHVADLFFREIVR 1348



 Score = 30.4 bits (67), Expect(2) = 2e-33
 Identities = 13/20 (65%), Positives = 15/20 (75%)
 Frame = +2

Query: 524  LHGMPEMIVSDRDPRFTSLF 583
            LHG+P  IVSDRD +F S F
Sbjct: 1349 LHGVPNTIVSDRDTKFLSHF 1368


>tr|Q94BM2|Q94BM2_HORVU Gag-pol polyprotein OS=Hordeum vulgare PE=4
            SV=1
          Length = 1720

 Score =  136 bits (342), Expect(2) = 3e-33
 Identities = 70/174 (40%), Positives = 99/174 (56%), Gaps = 1/174 (0%)
 Frame = +1

Query: 4    DQYATDSDFADVFTRIRDGETIAGYSIRDGYLMRKTMLCV-TQPLREKVMIECHCPPFTG 180
            DQY  D+DF DV    R+G T   + I +G++ R   LC+    +R  ++ E H     G
Sbjct: 1207 DQYVHDADFKDVLENCREGRTWNKFIINNGFVFRANKLCIPASSIRLLLLQEAHGGGLMG 1266

Query: 181  HRGIATTMKGVERYFF*TRLKKDVEEFVRSCLVCQKVKFDRHKAQGLLQPLPIPTRPWES 360
            H G+      +  +FF  R+++DVE FV  C  CQK K  R    GL  PLP+P+ PWE 
Sbjct: 1267 HFGVKKMEDVLATHFFWPRMRRDVERFVARCTTCQKAK-SRLNPHGLYMPLPVPSVPWED 1325

Query: 361  IAMDFIFDIPRT*SGHDGIWNVIDKFSKQAHFIPVKETVKPDHLARLFVAQIFR 522
            I+MDF+  +PRT  G D I+ V+D+FSK AHFIP  ++    ++A LF  +I R
Sbjct: 1326 ISMDFVLGLPRTKKGRDSIFVVVDRFSKMAHFIPCHKSDDAANVADLFFREIIR 1379



 Score = 30.4 bits (67), Expect(2) = 3e-33
 Identities = 13/20 (65%), Positives = 15/20 (75%)
 Frame = +2

Query: 524  LHGMPEMIVSDRDPRFTSLF 583
            LHG+P  IVSDRD +F S F
Sbjct: 1380 LHGVPNTIVSDRDAKFLSHF 1399


>tr|Q94BM1|Q94BM1_HORVU Gag-pol polyprotein OS=Hordeum vulgare PE=4
            SV=1
          Length = 1717

 Score =  136 bits (342), Expect(2) = 3e-33
 Identities = 70/174 (40%), Positives = 99/174 (56%), Gaps = 1/174 (0%)
 Frame = +1

Query: 4    DQYATDSDFADVFTRIRDGETIAGYSIRDGYLMRKTMLCV-TQPLREKVMIECHCPPFTG 180
            DQY  D+DF DV    R+G T   + I +G++ R   LC+    +R  ++ E H     G
Sbjct: 1204 DQYVHDADFKDVLENCREGRTWNKFIINNGFVFRANKLCIPASSIRLLLLQEAHGGGLMG 1263

Query: 181  HRGIATTMKGVERYFF*TRLKKDVEEFVRSCLVCQKVKFDRHKAQGLLQPLPIPTRPWES 360
            H G+      +  +FF  R+++DVE FV  C  CQK K  R    GL  PLP+P+ PWE 
Sbjct: 1264 HFGVKKMEDVLATHFFWPRMRRDVERFVARCTTCQKAK-SRLNPHGLYMPLPVPSVPWED 1322

Query: 361  IAMDFIFDIPRT*SGHDGIWNVIDKFSKQAHFIPVKETVKPDHLARLFVAQIFR 522
            I+MDF+  +PRT  G D I+ V+D+FSK AHFIP  ++    ++A LF  +I R
Sbjct: 1323 ISMDFVLGLPRTKKGRDSIFVVVDRFSKMAHFIPCHKSDDAANVADLFFREIIR 1376



 Score = 30.4 bits (67), Expect(2) = 3e-33
 Identities = 13/20 (65%), Positives = 15/20 (75%)
 Frame = +2

Query: 524  LHGMPEMIVSDRDPRFTSLF 583
            LHG+P  IVSDRD +F S F
Sbjct: 1377 LHGVPNTIVSDRDAKFLSHF 1396


>tr|Q10IG2|Q10IG2_ORYSJ Retrotransposon protein, putative, Ty3-gypsy
            subclass OS=Oryza sativa subsp. japonica
            GN=LOC_Os03g35326 PE=4 SV=1
          Length = 889

 Score =  135 bits (340), Expect(2) = 4e-33
 Identities = 69/174 (39%), Positives = 99/174 (56%), Gaps = 1/174 (0%)
 Frame = +1

Query: 4    DQYATDSDFADVFTRIRDGETIAGYSIRDGYLMRKTMLCV-TQPLREKVMIECHCPPFTG 180
            +QYA D DF DV     +G T   + + +G++ R   LC+    +R  ++ E H     G
Sbjct: 489  EQYAHDDDFKDVLLNCMEGRTWNKFVLTNGFVFRANKLCIPASSVRMLLLQEAHGGGLMG 548

Query: 181  HRGIATTMKGVERYFF*TRLKKDVEEFVRSCLVCQKVKFDRHKAQGLLQPLPIPTRPWES 360
            H G+  T   +  +FF  ++++DVE FV  C  CQK K  R    GL  PLP+P+ PWE 
Sbjct: 549  HFGVKKTEDILADHFFWPKMRRDVERFVARCTTCQKAK-SRLNPHGLYMPLPVPSVPWED 607

Query: 361  IAMDFIFDIPRT*SGHDGIWNVIDKFSKQAHFIPVKETVKPDHLARLFVAQIFR 522
            I+MDF+  +PRT  G D I+ V+D+FSK AHFIP  ++    H+A LF  +I R
Sbjct: 608  ISMDFVLGLPRTKKGRDSIFVVVDRFSKMAHFIPCHKSDDATHVADLFFREIVR 661



 Score = 30.4 bits (67), Expect(2) = 4e-33
 Identities = 13/20 (65%), Positives = 15/20 (75%)
 Frame = +2

Query: 524 LHGMPEMIVSDRDPRFTSLF 583
           LHG+P  IVSDRD +F S F
Sbjct: 662 LHGVPNTIVSDRDTKFLSHF 681


>tr|Q8L7J3|Q8L7J3_MAIZE Gag-pol polyprotein OS=Zea mays PE=4 SV=1
          Length = 1618

 Score =  134 bits (338), Expect(2) = 7e-33
 Identities = 69/174 (39%), Positives = 97/174 (55%), Gaps = 1/174 (0%)
 Frame = +1

Query: 4    DQYATDSDFADVFTRIRDGETIAGYSIRDGYLMRKTMLCV-TQPLREKVMIECHCPPFTG 180
            DQY  D+DF DV    +DG+    Y + DG++ R   LC+    +R  ++ E H     G
Sbjct: 1151 DQYVHDADFKDVLLHCKDGKGWNKYIVSDGFVFRANKLCIPASSVRLLLLQEAHGGGLMG 1210

Query: 181  HRGIATTMKGVERYFF*TRLKKDVEEFVRSCLVCQKVKFDRHKAQGLLQPLPIPTRPWES 360
            H G   T   +  +FF  ++++DV   V  C  CQK K  R    GL  PLP+P+ PWE 
Sbjct: 1211 HFGAKKTEDILAGHFFWPKMRRDVVRLVARCTTCQKAK-SRLNPHGLYLPLPVPSAPWED 1269

Query: 361  IAMDFIFDIPRT*SGHDGIWNVIDKFSKQAHFIPVKETVKPDHLARLFVAQIFR 522
            I+MDF+  +PRT  G D ++ V+D+FSK AHFIP  +T    H+A LF  +I R
Sbjct: 1270 ISMDFVLGLPRTRKGRDSVFVVVDRFSKMAHFIPCHKTDDATHIADLFFREIVR 1323



 Score = 30.4 bits (67), Expect(2) = 7e-33
 Identities = 13/20 (65%), Positives = 15/20 (75%)
 Frame = +2

Query: 524  LHGMPEMIVSDRDPRFTSLF 583
            LHG+P  IVSDRD +F S F
Sbjct: 1324 LHGVPNTIVSDRDAKFLSHF 1343


>tr|Q6UUJ1|Q6UUJ1_ORYSJ Putative gag-pol polyprotein (Putative
            polyprotein) OS=Oryza sativa subsp. japonica
            GN=OSJNBa0003M24.1 PE=4 SV=1
          Length = 1616

 Score =  134 bits (338), Expect(2) = 7e-33
 Identities = 68/174 (39%), Positives = 100/174 (57%), Gaps = 1/174 (0%)
 Frame = +1

Query: 4    DQYATDSDFADVFTRIRDGETIAGYSIRDGYLMRKTMLCV-TQPLREKVMIECHCPPFTG 180
            +QYA D DF +V    ++G T   + + +G++ R   LC+    +R  ++ E H     G
Sbjct: 1176 EQYAHDDDFKNVLLNCKEGRTWNKFVLTNGFVFRANKLCIPASSVRMLLLQEAHGGGLMG 1235

Query: 181  HRGIATTMKGVERYFF*TRLKKDVEEFVRSCLVCQKVKFDRHKAQGLLQPLPIPTRPWES 360
            H G+  T   +  +FF  ++++DVE FV  C  CQK K  R    GL  PLP+P+ PWE 
Sbjct: 1236 HFGVKKTEDILADHFFWPKMRRDVERFVARCTTCQKAK-SRLNPHGLYMPLPVPSVPWED 1294

Query: 361  IAMDFIFDIPRT*SGHDGIWNVIDKFSKQAHFIPVKETVKPDHLARLFVAQIFR 522
            I+MDF+  +PRT  G D I+ V+D+FSK AHFIP  ++    H+A LF  +I R
Sbjct: 1295 ISMDFVLGLPRTKKGRDSIFVVVDRFSKMAHFIPCHKSDDATHVADLFFREIVR 1348



 Score = 30.4 bits (67), Expect(2) = 7e-33
 Identities = 13/20 (65%), Positives = 15/20 (75%)
 Frame = +2

Query: 524  LHGMPEMIVSDRDPRFTSLF 583
            LHG+P  IVSDRD +F S F
Sbjct: 1349 LHGVPNTIVSDRDTKFLSHF 1368