DK954562
Clone id TST39A01NGRL0020_M07
Library
Length 630
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0020_M07. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence
CACACACACACACACACACACACACACAAGCAGCAGGTCGAAACTATGGCTACACATGAA
GATCACGACATAGGCGCGCCTGCAGCGATGGAAAGCCCATCGACTACAACAAACACGCAT
GACACTGGTGCTGCTACCAGTCATCATTTGACGAGCTTCTACTGGGGCCATCTAGCTACC
ATTCTGTTTGACGACTGGCGGACGACCTCGCCGGGCACCTACGTCGCCTCTCTGCTGGCC
CTCCTACTCATCTCCTTCCTCTACCAATACCTTGAGCGCCTCACTTCGCCCTCCTCCCCT
ATCCTCTTGCCCTATTCCTCCTCCTCTTCCTCATGCTGTCCAACCACCCCTCACAACAAT
AACAATCATTCTAAACCAATTTCCCCTTCCCCCCACCAGCTACCCCTCCCCACCAAACTC
CTCCTCACTTTGCTCTTCTCCCTCCGCGTCGGCCTCGCCTACCTTCTCATGCTCGCCGTC
ATGTCCTTCAACGGCGGCGTCTTCCTCGCCGTCATCCTCGGACTCTCTGCTGGCTTCTTC
GTCTTCCGCACAGACATCCATACGCCCAAATGTGTGCCGGTACTTTCAGCCTCTGATGCC
AATCTCCACCCTTGAATCCAGCTTGCGCAG
■■Homology search results ■■ -
sp_hit_id Q39065
Definition sp|Q39065|COPT1_ARATH Copper transporter 1 OS=Arabidopsis thaliana
Align length 37
Score (bit) 52.4
E-value 2.0e-06
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK954562|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0020_M07, 5'
(630 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q39065|COPT1_ARATH Copper transporter 1 OS=Arabidopsis thalia... 52 2e-06
sp|O15432|COPT2_HUMAN Probable low affinity copper uptake protei... 39 0.029
sp|Q9CPU9|COPT2_MOUSE Probable low affinity copper uptake protei... 38 0.038
sp|Q06686|CTR3_YEAST Copper transport protein CTR3 OS=Saccharomy... 35 0.25
sp|Q9P7F9|CTR5_SCHPO Copper transport protein ctr5 OS=Schizosacc... 34 0.55
sp|P38865|CTR2_YEAST Copper transport protein CTR2 OS=Saccharomy... 34 0.55
sp|Q9JK41|COPT1_RAT High affinity copper uptake protein 1 OS=Rat... 34 0.55
sp|Q5RAS6|COPT1_PONAB High affinity copper uptake protein 1 OS=P... 34 0.55
sp|Q8WNR0|COPT1_PIG High affinity copper uptake protein 1 OS=Sus... 34 0.55
sp|Q8K211|COPT1_MOUSE High affinity copper uptake protein 1 OS=M... 34 0.55
sp|O15431|COPT1_HUMAN High affinity copper uptake protein 1 OS=H... 34 0.55
sp|Q7YXD4|P80_DICDI Protein P80 OS=Dictyostelium discoideum GN=p... 32 2.7
sp|O94722|CTR4_SCHPO Copper transport protein ctr4 OS=Schizosacc... 32 3.5

>sp|Q39065|COPT1_ARATH Copper transporter 1 OS=Arabidopsis thaliana
GN=COPT1 PE=2 SV=2
Length = 170

Score = 52.4 bits (124), Expect = 2e-06
Identities = 23/37 (62%), Positives = 30/37 (81%)
Frame = +1

Query: 436 FSLRVGLAYLLMLAVMSFNGGVFLAVILGLSAGFFVF 546
++LR+GLAYL+MLAVMSFN GVFL + G + GF +F
Sbjct: 110 YTLRIGLAYLVMLAVMSFNAGVFLVALAGHAVGFMLF 146


>sp|O15432|COPT2_HUMAN Probable low affinity copper uptake protein 2
OS=Homo sapiens GN=SLC31A2 PE=2 SV=1
Length = 143

Score = 38.5 bits (88), Expect = 0.029
Identities = 15/34 (44%), Positives = 26/34 (76%)
Frame = +1

Query: 442 LRVGLAYLLMLAVMSFNGGVFLAVILGLSAGFFV 543
++V + Y +MLAVMS+N +FL V+LG + G+++
Sbjct: 102 IQVVIGYFIMLAVMSYNTWIFLGVVLGSAVGYYL 135


>sp|Q9CPU9|COPT2_MOUSE Probable low affinity copper uptake protein 2
OS=Mus musculus GN=Slc31a2 PE=2 SV=1
Length = 143

Score = 38.1 bits (87), Expect = 0.038
Identities = 15/34 (44%), Positives = 26/34 (76%)
Frame = +1

Query: 442 LRVGLAYLLMLAVMSFNGGVFLAVILGLSAGFFV 543
++V + Y +MLAVMS+N +FL V+LG + G+++
Sbjct: 102 IQVVIGYFVMLAVMSYNTWIFLGVVLGSAVGYYL 135


>sp|Q06686|CTR3_YEAST Copper transport protein CTR3 OS=Saccharomyces
cerevisiae GN=CTR3 PE=1 SV=1
Length = 241

Score = 35.4 bits (80), Expect = 0.25
Identities = 14/37 (37%), Positives = 25/37 (67%)
Frame = +1

Query: 436 FSLRVGLAYLLMLAVMSFNGGVFLAVILGLSAGFFVF 546
F L+ GL+Y++ML M +NG + ++ ++G G F+F
Sbjct: 174 FVLQWGLSYIIMLLFMYYNGYIIISCLIGAIVGRFIF 210


>sp|Q9P7F9|CTR5_SCHPO Copper transport protein ctr5
OS=Schizosaccharomyces pombe GN=ctr5 PE=1 SV=1
Length = 173

Score = 34.3 bits (77), Expect = 0.55
Identities = 17/35 (48%), Positives = 22/35 (62%)
Frame = +1

Query: 457 AYLLMLAVMSFNGGVFLAVILGLSAGFFVFRTDIH 561
A +LML VMSFNG L +G GFF+F +D +
Sbjct: 126 ATILMLIVMSFNGYAILFGFVGAWIGFFLFASDTY 160


>sp|P38865|CTR2_YEAST Copper transport protein CTR2 OS=Saccharomyces
cerevisiae GN=CTR2 PE=1 SV=1
Length = 189

Score = 34.3 bits (77), Expect = 0.55
Identities = 15/39 (38%), Positives = 26/39 (66%)
Frame = +1

Query: 436 FSLRVGLAYLLMLAVMSFNGGVFLAVILGLSAGFFVFRT 552
+ L+VG +++LML M++NG + LAV+ G G + + T
Sbjct: 137 YGLQVGFSFMLMLVFMTYNGWLMLAVVCGAIWGNYSWCT 175


>sp|Q9JK41|COPT1_RAT High affinity copper uptake protein 1 OS=Rattus
norvegicus GN=Slc31a1 PE=2 SV=1
Length = 187

Score = 34.3 bits (77), Expect = 0.55
Identities = 14/35 (40%), Positives = 24/35 (68%)
Frame = +1

Query: 442 LRVGLAYLLMLAVMSFNGGVFLAVILGLSAGFFVF 546
++V ++Y LML M++NG + +AV G G+F+F
Sbjct: 138 IQVVISYFLMLIFMTYNGYLCIAVAAGAGTGYFLF 172


>sp|Q5RAS6|COPT1_PONAB High affinity copper uptake protein 1
OS=Pongo abelii GN=SLC31A1 PE=2 SV=1
Length = 190

Score = 34.3 bits (77), Expect = 0.55
Identities = 14/35 (40%), Positives = 24/35 (68%)
Frame = +1

Query: 442 LRVGLAYLLMLAVMSFNGGVFLAVILGLSAGFFVF 546
++V ++Y LML M++NG + +AV G G+F+F
Sbjct: 141 IQVVISYFLMLIFMTYNGYLCIAVAAGAGTGYFLF 175


>sp|Q8WNR0|COPT1_PIG High affinity copper uptake protein 1 OS=Sus
scrofa GN=SLC31A1 PE=2 SV=1
Length = 189

Score = 34.3 bits (77), Expect = 0.55
Identities = 14/35 (40%), Positives = 24/35 (68%)
Frame = +1

Query: 442 LRVGLAYLLMLAVMSFNGGVFLAVILGLSAGFFVF 546
++V ++Y LML M++NG + +AV G G+F+F
Sbjct: 140 IQVVISYFLMLIFMTYNGYLCIAVAAGAGTGYFLF 174


>sp|Q8K211|COPT1_MOUSE High affinity copper uptake protein 1 OS=Mus
musculus GN=Slc31a1 PE=2 SV=1
Length = 196

Score = 34.3 bits (77), Expect = 0.55
Identities = 14/35 (40%), Positives = 24/35 (68%)
Frame = +1

Query: 442 LRVGLAYLLMLAVMSFNGGVFLAVILGLSAGFFVF 546
++V ++Y LML M++NG + +AV G G+F+F
Sbjct: 147 IQVVISYFLMLIFMTYNGYLCIAVAAGAGTGYFLF 181


tr_hit_id Q93VM8
Definition tr|Q93VM8|Q93VM8_ARATH AT5g20650/T1M15_50 (COPT5) OS=Arabidopsis thaliana
Align length 137
Score (bit) 65.9
E-value 2.0e-09
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK954562|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0020_M07, 5'
(630 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q93VM8|Q93VM8_ARATH AT5g20650/T1M15_50 (COPT5) OS=Arabidopsis... 66 2e-09
tr|Q69P80|Q69P80_ORYSJ Os09g0440700 protein OS=Oryza sativa subs... 64 6e-09
tr|A2Z1P3|A2Z1P3_ORYSI Putative uncharacterized protein OS=Oryza... 64 6e-09
tr|A7PNX0|A7PNX0_VITVI Chromosome chr8 scaffold_23, whole genome... 59 3e-07
tr|A9NY93|A9NY93_PICSI Putative uncharacterized protein OS=Picea... 58 4e-07
tr|A9PD84|A9PD84_POPTR Putative uncharacterized protein OS=Popul... 58 5e-07
tr|A7P4V3|A7P4V3_VITVI Chromosome chr4 scaffold_6, whole genome ... 58 5e-07
tr|Q8SAA4|Q8SAA4_ARATH COPT5 (Fragment) OS=Arabidopsis thaliana ... 57 7e-07
tr|Q60EN8|Q60EN8_ORYSJ Os05g0424700 protein OS=Oryza sativa subs... 57 7e-07
tr|A2Y4V1|A2Y4V1_ORYSI Putative uncharacterized protein OS=Oryza... 57 7e-07
tr|A9S7E1|A9S7E1_PHYPA Ctr family transporter OS=Physcomitrella ... 57 1e-06
tr|Q94EE4|Q94EE4_ORYSJ Putative copper transporter protein OS=Or... 55 3e-06
tr|Q0JIY5|Q0JIY5_ORYSJ Os01g0770700 protein OS=Oryza sativa subs... 55 3e-06
tr|B8AA54|B8AA54_ORYSI Putative uncharacterized protein OS=Oryza... 55 3e-06
tr|Q6Z0Q9|Q6Z0Q9_ORYSJ COPT5-like protein OS=Oryza sativa subsp.... 55 5e-06
tr|A2YVV8|A2YVV8_ORYSI Putative uncharacterized protein OS=Oryza... 55 5e-06
tr|A9SWV9|A9SWV9_PHYPA Ctr family copper transporter OS=Physcomi... 54 6e-06
tr|Q8GWP3|Q8GWP3_ARATH Putative copper transport protein OS=Arab... 54 1e-05
tr|B6UHR5|B6UHR5_MAIZE Copper transporter 1 OS=Zea mays PE=2 SV=1 54 1e-05
tr|A9PEN3|A9PEN3_POPTR Putative uncharacterized protein OS=Popul... 54 1e-05
tr|Q5ZD08|Q5ZD08_ORYSJ cDNA clone:002-156-C01, full insert seque... 52 2e-05
tr|Q547P9|Q547P9_ARATH Copper transporter COPT1 (Copper transpor... 52 2e-05
tr|Q0JIY4|Q0JIY4_ORYSJ Os01g0770800 protein (Fragment) OS=Oryza ... 52 2e-05
tr|A7NYP4|A7NYP4_VITVI Chromosome chr6 scaffold_3, whole genome ... 52 2e-05
tr|A2ZY89|A2ZY89_ORYSJ Putative uncharacterized protein OS=Oryza... 52 2e-05
tr|Q9STG2|Q9STG2_ARATH Copper transporter protein homolog (At3g4... 52 4e-05
tr|Q0ZB34|Q0ZB34_CHLRE CTR family transmembrane copper ion trans... 51 7e-05
tr|B6TTV1|B6TTV1_MAIZE Copper transporter 1 OS=Zea mays PE=2 SV=1 51 7e-05
tr|B6SJM6|B6SJM6_MAIZE Copper transporter 1 OS=Zea mays PE=2 SV=1 51 7e-05
tr|A9NYF4|A9NYF4_PICSI Putative uncharacterized protein OS=Picea... 51 7e-05

>tr|Q93VM8|Q93VM8_ARATH AT5g20650/T1M15_50 (COPT5) OS=Arabidopsis
thaliana GN=At5g20650 PE=2 SV=1
Length = 146

Score = 65.9 bits (159), Expect = 2e-09
Identities = 44/137 (32%), Positives = 61/137 (44%)
Frame = +1

Query: 145 HLTSFYWGHLATILFDDWRTTSPGTYVXXXXXXXXXXXXXXXXERXXXXXXXXXXXXXXX 324
H+T FYWG ATILFD W+T S +Y+ E
Sbjct: 3 HMT-FYWGIKATILFDFWKTDSWLSYILTLIACFVFSAFYQYLENRRIQFKSLSSSRRAP 61

Query: 325 XXXXXXXXXHNNNNHSKPISPSPHQXXXXXXXXXXXXFSLRVGLAYLLMLAVMSFNGGVF 504
+++ S P+ P F + + YLLMLA MSFNGGVF
Sbjct: 62 PPP------RSSSGVSAPLIPKSGTRSAAKAASVLL-FGVNAAIGYLLMLAAMSFNGGVF 114

Query: 505 LAVILGLSAGFFVFRTD 555
+A+++GL+AG+ VFR+D
Sbjct: 115 IAIVVGLTAGYAVFRSD 131


>tr|Q69P80|Q69P80_ORYSJ Os09g0440700 protein OS=Oryza sativa subsp.
japonica GN=OJ1344_B01.31 PE=2 SV=1
Length = 149

Score = 64.3 bits (155), Expect = 6e-09
Identities = 44/136 (32%), Positives = 58/136 (42%)
Frame = +1

Query: 145 HLTSFYWGHLATILFDDWRTTSPGTYVXXXXXXXXXXXXXXXXERXXXXXXXXXXXXXXX 324
H+T FYWG TILFD WRT + Y+ E
Sbjct: 3 HMT-FYWGKDVTILFDGWRTATWTGYLLSLVALLLASAFYQYLEAFRIRVKLLAGAKPAS 61

Query: 325 XXXXXXXXXHNNNNHSKPISPSPHQXXXXXXXXXXXXFSLRVGLAYLLMLAVMSFNGGVF 504
++ + + PS F + GL YLLMLAVMSFNGGVF
Sbjct: 62 IPPPAS----SDAARAPLLLPSSAAGRWPARLATAGLFGVNSGLGYLLMLAVMSFNGGVF 117

Query: 505 LAVILGLSAGFFVFRT 552
+AV++GL+AG+ FR+
Sbjct: 118 VAVVVGLAAGYLAFRS 133


>tr|A2Z1P3|A2Z1P3_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_31527 PE=4 SV=1
Length = 149

Score = 64.3 bits (155), Expect = 6e-09
Identities = 44/136 (32%), Positives = 58/136 (42%)
Frame = +1

Query: 145 HLTSFYWGHLATILFDDWRTTSPGTYVXXXXXXXXXXXXXXXXERXXXXXXXXXXXXXXX 324
H+T FYWG TILFD WRT + Y+ E
Sbjct: 3 HMT-FYWGKDVTILFDGWRTATWTGYLLSLVALLLASAFYQYLEAFRIRVKLLAGAKPAS 61

Query: 325 XXXXXXXXXHNNNNHSKPISPSPHQXXXXXXXXXXXXFSLRVGLAYLLMLAVMSFNGGVF 504
++ + + PS F + GL YLLMLAVMSFNGGVF
Sbjct: 62 IPPPAS----SDAARAPLLLPSSAAGRWPARLATAGLFGVNSGLGYLLMLAVMSFNGGVF 117

Query: 505 LAVILGLSAGFFVFRT 552
+AV++GL+AG+ FR+
Sbjct: 118 VAVVVGLAAGYLAFRS 133


>tr|A7PNX0|A7PNX0_VITVI Chromosome chr8 scaffold_23, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00021423001
PE=4 SV=1
Length = 287

Score = 58.5 bits (140), Expect = 3e-07
Identities = 40/134 (29%), Positives = 52/134 (38%)
Frame = +1

Query: 145 HLTSFYWGHLATILFDDWRTTSPGTYVXXXXXXXXXXXXXXXXERXXXXXXXXXXXXXXX 324
H+T F+WG A ILF W TS G Y R
Sbjct: 29 HMT-FFWGKNAEILFSGWPGTSSGMYALALILVFVVALLLEWLSR--------------- 72

Query: 325 XXXXXXXXXHNNNNHSKPISPSPHQXXXXXXXXXXXXFSLRVGLAYLLMLAVMSFNGGVF 504
S + P PH +++R G +Y+LMLAVMSFNGG+F
Sbjct: 73 ---------------SSLLKPGPHNVTTGLLQTAL--YAIRSGFSYMLMLAVMSFNGGIF 115

Query: 505 LAVILGLSAGFFVF 546
LA + G + GF +F
Sbjct: 116 LAAVAGHALGFLIF 129



Score = 45.1 bits (105), Expect = 0.004
Identities = 21/35 (60%), Positives = 27/35 (77%)
Frame = +1

Query: 439 SLRVGLAYLLMLAVMSFNGGVFLAVILGLSAGFFV 543
++R+GL YL+MLAVMSFN GV L I G + GFF+
Sbjct: 234 AVRMGLGYLVMLAVMSFNVGVLLVAIAGHAVGFFL 268


>tr|A9NY93|A9NY93_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 137

Score = 58.2 bits (139), Expect = 4e-07
Identities = 27/39 (69%), Positives = 30/39 (76%)
Frame = +1

Query: 436 FSLRVGLAYLLMLAVMSFNGGVFLAVILGLSAGFFVFRT 552
F L GL YLLMLA MSFNGGVF+AVILG G+F FR+
Sbjct: 85 FGLNAGLGYLLMLAAMSFNGGVFIAVILGFVVGYFFFRS 123


>tr|A9PD84|A9PD84_POPTR Putative uncharacterized protein OS=Populus
trichocarpa PE=2 SV=1
Length = 149

Score = 57.8 bits (138), Expect = 5e-07
Identities = 25/40 (62%), Positives = 33/40 (82%)
Frame = +1

Query: 436 FSLRVGLAYLLMLAVMSFNGGVFLAVILGLSAGFFVFRTD 555
F + G+ YLLML VMSFNGGVFLAV+LGL+ G+ +FR++
Sbjct: 96 FGINSGIGYLLMLVVMSFNGGVFLAVVLGLAIGYLLFRSE 135


>tr|A7P4V3|A7P4V3_VITVI Chromosome chr4 scaffold_6, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00032295001
PE=4 SV=1
Length = 137

Score = 57.8 bits (138), Expect = 5e-07
Identities = 42/138 (30%), Positives = 55/138 (39%), Gaps = 2/138 (1%)
Frame = +1

Query: 145 HLTSFYWGHLATILFDDWRTTSPGTYVXXXXXXXXXXXXXXXXERXXXXXXXXXXXXXXX 324
H+T FYW T+L D W+T S +Y E
Sbjct: 3 HMT-FYWSTSVTLLIDSWKTESWASYGLTLLACLIASAFYQYLEDRRIRLKLIAASVG-- 59

Query: 325 XXXXXXXXXHNNNNHSKPISPSPHQXXXXXXXXXXXX--FSLRVGLAYLLMLAVMSFNGG 498
S P S SP + F + + YL+MLAVMSFNGG
Sbjct: 60 ---------------SSPASASPIEEPLLHATKFAGAALFGINSAIGYLIMLAVMSFNGG 104

Query: 499 VFLAVILGLSAGFFVFRT 552
VFLAV+LGL+ G+ +FR+
Sbjct: 105 VFLAVVLGLAIGYLLFRS 122


>tr|Q8SAA4|Q8SAA4_ARATH COPT5 (Fragment) OS=Arabidopsis thaliana
GN=COPT5 PE=2 SV=1
Length = 132

Score = 57.4 bits (137), Expect = 7e-07
Identities = 24/40 (60%), Positives = 33/40 (82%)
Frame = +1

Query: 436 FSLRVGLAYLLMLAVMSFNGGVFLAVILGLSAGFFVFRTD 555
F + + YLLMLA MSFNGGVF+A+++GL+AG+ VFR+D
Sbjct: 78 FGVNAAIGYLLMLAAMSFNGGVFIAIVVGLTAGYAVFRSD 117


>tr|Q60EN8|Q60EN8_ORYSJ Os05g0424700 protein OS=Oryza sativa subsp.
japonica GN=OJ1212_B02.11 PE=2 SV=1
Length = 151

Score = 57.4 bits (137), Expect = 7e-07
Identities = 25/40 (62%), Positives = 34/40 (85%)
Frame = +1

Query: 439 SLRVGLAYLLMLAVMSFNGGVFLAVILGLSAGFFVFRTDI 558
++RVG+AYL+MLA+MSFNGGVFLA++ G +AGF FR +
Sbjct: 92 AVRVGVAYLIMLALMSFNGGVFLAIVAGHAAGFLAFRAGL 131


>tr|A2Y4V1|A2Y4V1_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_20027 PE=4 SV=1
Length = 151

Score = 57.4 bits (137), Expect = 7e-07
Identities = 25/40 (62%), Positives = 34/40 (85%)
Frame = +1

Query: 439 SLRVGLAYLLMLAVMSFNGGVFLAVILGLSAGFFVFRTDI 558
++RVG+AYL+MLA+MSFNGGVFLA++ G +AGF FR +
Sbjct: 92 AVRVGVAYLIMLALMSFNGGVFLAIVAGHAAGFLAFRAGL 131