DK954564
Clone id TST39A01NGRL0020_M09
Library
Length 565
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0020_M09. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence
GGTGTTTAGTCGCAGATCCTGCTAATCTTCCCGGCTGCGCTCGGTTTGGTTGGCACTATC
TGGCACAATGAATCATCCTCACTCTGTCATGAGCTTCGCTTCACTCACAGGATCTCCTAC
AGGCCAGACGTTGCACCCCAGCCATTTTTCCTCGGTGTTCCCAGACTGTCCTAACGAGCC
TTCGCTAGACTTGAATTTTGTGCAAAAGCTGTCACAGAATAGCCAAAAGGCACAGAATGA
GTTTGAGCTAGGCCACAGCTTCCATCCTCACCACAATGAAAACAGTCCAAACTCTCAAAT
GGAGATAATAGCAAAGGTTGTACCTGAGTCCGTTGTATTTAATGATGGCCAGGATAAGAT
GGCTATTGACAGTGTGCCTGTCAAAGCGGCACCACGGTCTCGCTGCCACTGGTCTCATGG
TGAAGTAATGGCCCTGTTTGATGCAAAGAAAGCAGAAGCTGATAGATTTGATGTTGAGAT
GCCTGGAAAGAAAATCAAGTATTCCTCTGAACGGTGGGAATGAGGTGGCTGCCTTTGTAA
AAAACTAGGGGTTGCACTAAACTTG
■■Homology search results ■■ -
sp_hit_id P82986
Definition sp|P82986|OR82A_DROME Putative odorant receptor 82a OS=Drosophila melanogaster
Align length 101
Score (bit) 32.7
E-value 1.3
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK954564|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0020_M09, 5'
(565 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P82986|OR82A_DROME Putative odorant receptor 82a OS=Drosophil... 33 1.3
sp|B0UV84|PRMA_HAES2 Ribosomal protein L11 methyltransferase OS=... 32 2.9
sp|A5ISW6|EBH_STAA9 Extracellular matrix-binding protein ebh OS=... 32 2.9
sp|A6U1Q5|EBH_STAA2 Extracellular matrix-binding protein ebh OS=... 32 2.9
sp|Q7A5M1|EBHB_STAAN Extracellular matrix-binding protein ebhB O... 32 2.9
sp|Q99U53|EBHB_STAAM Extracellular matrix-binding protein ebhB O... 32 2.9
sp|A7X2C5|EBHB_STAA1 Extracellular matrix-binding protein ebhB O... 32 2.9
sp|Q99MV7|RNF17_MOUSE RING finger protein 17 OS=Mus musculus GN=... 31 4.9
sp|Q8NM41|DEF2_CORGL Peptide deformylase 2 OS=Corynebacterium gl... 31 4.9
sp|Q5ZKL9|CL048_CHICK UPF0419 protein C12orf48 homolog OS=Gallus... 31 4.9
sp|Q9CLW2|PRMA_PASMU Ribosomal protein L11 methyltransferase OS=... 30 6.4
sp|Q700D9|MYBF_ARATH Putative Myb family transcription factor At... 30 6.4
sp|P22787|YIFB_ECOLI Uncharacterized protein yifB OS=Escherichia... 30 8.3
sp|Q65V70|PRMA_MANSM Ribosomal protein L11 methyltransferase OS=... 30 8.3
sp|Q0I1Y6|PRMA_HAES1 Ribosomal protein L11 methyltransferase OS=... 30 8.3
sp|A6VM22|PRMA_ACTSZ Ribosomal protein L11 methyltransferase OS=... 30 8.3

>sp|P82986|OR82A_DROME Putative odorant receptor 82a OS=Drosophila
melanogaster GN=Or82a PE=2 SV=1
Length = 385

Score = 32.7 bits (73), Expect = 1.3
Identities = 26/101 (25%), Positives = 48/101 (47%), Gaps = 7/101 (6%)
Frame = -1

Query: 535 KAATSFPPFRGILDFLSRHLNIKSI---SFCFLCIKQGHYFTMRPVAARPWCRFDRHTVN 365
++A+ P +R LD+++ + S ++C C G YF + P+ CR+ T +
Sbjct: 101 QSASHIPRYREGLDYVAEANKLASFLGRAYCVSCGLTGLYFMLGPIVKIGVCRWHGTTCD 160

Query: 364 SHLILAI-IKYNGLR---YNLCYYLHLRVWTVFIVVRMEAV 254
L + + +N L Y +C +L+ + TV +V AV
Sbjct: 161 KELPMPMKFPFNDLESPGYEVC-FLYTVLVTVVVVAYASAV 200


>sp|B0UV84|PRMA_HAES2 Ribosomal protein L11 methyltransferase
OS=Haemophilus somnus (strain 2336) GN=prmA PE=3 SV=1
Length = 296

Score = 31.6 bits (70), Expect = 2.9
Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 4/60 (6%)
Frame = +2

Query: 281 NSPNSQMEIIAKVVPE----SVVFNDGQDKMAIDSVPVKAAPRSRCHWSHGEVMALFDAK 448
NS N + E I++ + E SV F D QD + +P + W + +V+ALFDAK
Sbjct: 9 NSTNEKAEKISEYLEEIGAVSVTFMDSQDTPIFEPLPGETRL-----WGNTDVIALFDAK 63


>sp|A5ISW6|EBH_STAA9 Extracellular matrix-binding protein ebh
OS=Staphylococcus aureus (strain JH9) GN=ebh PE=4 SV=1
Length = 10624

Score = 31.6 bits (70), Expect = 2.9
Identities = 18/46 (39%), Positives = 24/46 (52%)
Frame = +2

Query: 215 QNSQKAQNEFELGHSFHPHHNENSPNSQMEIIAKVVPESVVFNDGQ 352
QNSQ +QN L + H NE NSQ ++ + V +S ND Q
Sbjct: 68 QNSQNSQNSQSLSAT---HENEQPNNSQANLVNQKVAQSSTTNDEQ 110


>sp|A6U1Q5|EBH_STAA2 Extracellular matrix-binding protein ebh
OS=Staphylococcus aureus (strain JH1) GN=ebh PE=4 SV=1
Length = 10624

Score = 31.6 bits (70), Expect = 2.9
Identities = 18/46 (39%), Positives = 24/46 (52%)
Frame = +2

Query: 215 QNSQKAQNEFELGHSFHPHHNENSPNSQMEIIAKVVPESVVFNDGQ 352
QNSQ +QN L + H NE NSQ ++ + V +S ND Q
Sbjct: 68 QNSQNSQNSQSLSAT---HENEQPNNSQANLVNQKVAQSSTTNDEQ 110


>sp|Q7A5M1|EBHB_STAAN Extracellular matrix-binding protein ebhB
OS=Staphylococcus aureus (strain N315) GN=ebhB PE=4 SV=1
Length = 3890

Score = 31.6 bits (70), Expect = 2.9
Identities = 18/46 (39%), Positives = 24/46 (52%)
Frame = +2

Query: 215 QNSQKAQNEFELGHSFHPHHNENSPNSQMEIIAKVVPESVVFNDGQ 352
QNSQ +QN L + H NE NSQ ++ + V +S ND Q
Sbjct: 68 QNSQNSQNSQSLSAT---HENEQPNNSQANLVNQKVAQSSTTNDEQ 110


>sp|Q99U53|EBHB_STAAM Extracellular matrix-binding protein ebhB
OS=Staphylococcus aureus (strain Mu50 / ATCC 700699)
GN=ebhB PE=4 SV=1
Length = 3890

Score = 31.6 bits (70), Expect = 2.9
Identities = 18/46 (39%), Positives = 24/46 (52%)
Frame = +2

Query: 215 QNSQKAQNEFELGHSFHPHHNENSPNSQMEIIAKVVPESVVFNDGQ 352
QNSQ +QN L + H NE NSQ ++ + V +S ND Q
Sbjct: 68 QNSQNSQNSQSLSAT---HENEQPNNSQANLVNQKVAQSSTTNDEQ 110


>sp|A7X2C5|EBHB_STAA1 Extracellular matrix-binding protein ebhB
OS=Staphylococcus aureus (strain Mu3 / ATCC 700698)
GN=ebhB PE=4 SV=1
Length = 3890

Score = 31.6 bits (70), Expect = 2.9
Identities = 18/46 (39%), Positives = 24/46 (52%)
Frame = +2

Query: 215 QNSQKAQNEFELGHSFHPHHNENSPNSQMEIIAKVVPESVVFNDGQ 352
QNSQ +QN L + H NE NSQ ++ + V +S ND Q
Sbjct: 68 QNSQNSQNSQSLSAT---HENEQPNNSQANLVNQKVAQSSTTNDEQ 110


>sp|Q99MV7|RNF17_MOUSE RING finger protein 17 OS=Mus musculus
GN=Rnf17 PE=1 SV=2
Length = 1640

Score = 30.8 bits (68), Expect = 4.9
Identities = 18/53 (33%), Positives = 25/53 (47%)
Frame = +2

Query: 140 SHFSSVFPDCPNEPSLDLNFVQKLSQNSQKAQNEFELGHSFHPHHNENSPNSQ 298
S SS+ P N P LD+N + + S + EFE +P NE+ N Q
Sbjct: 270 SQVSSIIPR--NTPRLDINCSEAICMFSSMGKIEFEDSTKCYPQENEDGQNVQ 320


>sp|Q8NM41|DEF2_CORGL Peptide deformylase 2 OS=Corynebacterium
glutamicum GN=def2 PE=3 SV=1
Length = 193

Score = 30.8 bits (68), Expect = 4.9
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +2

Query: 320 VPESVVFNDGQDKMAIDSVPVKAAPRSRCHWS 415
+PE++ +DG D+ SVP + P R HW+
Sbjct: 85 IPETMPADDGSDEEGCLSVPGEGFPTGRAHWA 116


>sp|Q5ZKL9|CL048_CHICK UPF0419 protein C12orf48 homolog OS=Gallus
gallus GN=RCJMB04_10b14 PE=2 SV=2
Length = 580

Score = 30.8 bits (68), Expect = 4.9
Identities = 18/61 (29%), Positives = 30/61 (49%)
Frame = +2

Query: 125 QTLHPSHFSSVFPDCPNEPSLDLNFVQKLSQNSQKAQNEFELGHSFHPHHNENSPNSQME 304
Q LH +F+ C LD+ + +S+N + +N E+G N+NS N QM+
Sbjct: 461 QHLHGKYFTEGMNSC-----LDIPVLGTISENVHQNRNYREMGKLSCQPRNKNSKNEQMD 515

Query: 305 I 307
+
Sbjct: 516 L 516


tr_hit_id B6HH87
Definition tr|B6HH87|B6HH87_PENCH Pc20g14010 protein OS=Penicillium chrysogenum Wisconsin 54-1255
Align length 92
Score (bit) 39.7
E-value 0.12
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK954564|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0020_M09, 5'
(565 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B6HH87|B6HH87_PENCH Pc20g14010 protein OS=Penicillium chrysog... 40 0.12
tr|B6DTF9|B6DTF9_9EUGL Putative uncharacterized protein OS=Bodo ... 37 0.58
tr|A5FCH3|A5FCH3_FLAJ1 Alpha-L-rhamnosidase OS=Flavobacterium jo... 36 1.3
tr|B3KZA6|B3KZA6_PLAKH Methionine aminopeptidase, putative OS=Pl... 36 1.3
tr|Q835I7|Q835I7_ENTFA NAD-dependent formate dehydrogenase, alph... 36 1.7
tr|B4N0Z3|B4N0Z3_DROWI GK24846 OS=Drosophila willistoni GN=GK248... 36 1.7
tr|Q6BMX1|Q6BMX1_DEBHA DEHA2F01958p OS=Debaryomyces hansenii GN=... 35 2.9
tr|A9RJ40|A9RJ40_PHYPA Predicted protein OS=Physcomitrella paten... 35 3.7
tr|B6QHU4|B6QHU4_PENMA WD repeat protein OS=Penicillium marneffe... 34 4.9
tr|Q484R9|Q484R9_COLP3 TonB-dependent receptor OS=Colwellia psyc... 34 6.4
tr|B3NLI7|B3NLI7_DROER GG21781 OS=Drosophila erecta GN=GG21781 P... 34 6.4
tr|Q55BK7|Q55BK7_DICDI Putative uncharacterized protein OS=Dicty... 33 8.3

>tr|B6HH87|B6HH87_PENCH Pc20g14010 protein OS=Penicillium
chrysogenum Wisconsin 54-1255 GN=Pc20g14010 PE=4 SV=1
Length = 230

Score = 39.7 bits (91), Expect = 0.12
Identities = 22/92 (23%), Positives = 44/92 (47%), Gaps = 3/92 (3%)
Frame = +2

Query: 251 GHSFHPHHNENSPNSQMEIIAKVVPESVVFNDGQDKMAIDSVP---VKAAPRSRCHWSHG 421
G PH + + P Q+ ++ P +++F G++++ +D P ++ + SR HW+HG
Sbjct: 100 GAGIPPHVDAHKPYDQLYALSIGAPATMIFRRGEERIEVDLTPRSMMQMSGDSRLHWTHG 159

Query: 422 EVMALFDAKKAEADRFDVEMPGKKIKYSSERW 517
+K + D +P ++ ERW
Sbjct: 160 -------IRKRKND----TLPDGTVRPRGERW 180


>tr|B6DTF9|B6DTF9_9EUGL Putative uncharacterized protein OS=Bodo
saltans PE=4 SV=1
Length = 881

Score = 37.4 bits (85), Expect = 0.58
Identities = 31/121 (25%), Positives = 45/121 (37%), Gaps = 7/121 (5%)
Frame = +2

Query: 59 SGTMNHPHSVMSFASLTGSPTGQTLHPSHFSSVFPDCPNEPSLDLNFVQKLSQNSQKAQN 238
SG +HP ++ +S T PS S V+P N P + L Q + Q Q+ +
Sbjct: 739 SGATHHPLQHVTLSSNTSDARSTLAAPSQLSRVYPSSANRPIVGLQATQMMMQQQQQQPS 798

Query: 239 EFELGHSFHPHHNENSPN-------SQMEIIAKVVPESVVFNDGQDKMAIDSVPVKAAPR 397
G + PN S + P +V Q + SVP +APR
Sbjct: 799 GVGRGPNPAAAPLATLPNGFVLVGSSSSNASSFQQPHRMVSQQQQQQQQQPSVPGTSAPR 858

Query: 398 S 400
S
Sbjct: 859 S 859


>tr|A5FCH3|A5FCH3_FLAJ1 Alpha-L-rhamnosidase OS=Flavobacterium
johnsoniae (strain ATCC 17061 / DSM 2064 / UW101)
GN=Fjoh_4085 PE=3 SV=1
Length = 926

Score = 36.2 bits (82), Expect = 1.3
Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Frame = +2

Query: 140 SHFSSVFPDCPNEPSLDLNFVQKLSQNSQKAQNEFELGHSFHPHHNENSPNSQME--IIA 313
S+F SVF DCP L +++++ N + L +F P +N +SQ E +I
Sbjct: 509 SNFQSVFTDCPQREK--LGWLEEIQLNGPSLMFNYNL-QTFLPATMQNISDSQRENGLIP 565

Query: 314 KVVPESVVF 340
+VPE V+F
Sbjct: 566 TIVPEYVIF 574


>tr|B3KZA6|B3KZA6_PLAKH Methionine aminopeptidase, putative
OS=Plasmodium knowlesi (strain H) GN=PKH_011420 PE=4
SV=1
Length = 673

Score = 36.2 bits (82), Expect = 1.3
Identities = 19/73 (26%), Positives = 34/73 (46%), Gaps = 6/73 (8%)
Frame = +2

Query: 296 QMEIIAKVVPESVVFNDGQDKMAIDSVP------VKAAPRSRCHWSHGEVMALFDAKKAE 457
++E+ + E V++N Q+ D + + +P+ + + +H A FD K E
Sbjct: 454 ELELFHRQYDEQVIYNKNQNSQTYDDIQRYIYNKTRGSPKDKNNRNHQNRFAFFDKGKLE 513

Query: 458 ADRFDVEMPGKKI 496
AD F + M K I
Sbjct: 514 ADEFKMYMRKKNI 526


>tr|Q835I7|Q835I7_ENTFA NAD-dependent formate dehydrogenase, alpha
subunit OS=Enterococcus faecalis GN=fdhA PE=4 SV=1
Length = 906

Score = 35.8 bits (81), Expect = 1.7
Identities = 23/68 (33%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Frame = -3

Query: 377 AHCQ*PSYPGHH*IQ----RTQVQPLLLSPFESLDCFHCGEDGSCGLAQTHSVPFGYSVT 210
AHCQ H + R + LLLS + L+CF CG++G C L Q +++ +G VT
Sbjct: 74 AHCQEDMVVATHSEKVADSRRFILDLLLSNHK-LECFSCGKNGDCQL-QQYALDYGIDVT 131

Query: 209 AFAQNSSL 186
+F + +
Sbjct: 132 SFTEGKRM 139


>tr|B4N0Z3|B4N0Z3_DROWI GK24846 OS=Drosophila willistoni GN=GK24846
PE=4 SV=1
Length = 2546

Score = 35.8 bits (81), Expect = 1.7
Identities = 24/90 (26%), Positives = 37/90 (41%)
Frame = +2

Query: 146 FSSVFPDCPNEPSLDLNFVQKLSQNSQKAQNEFELGHSFHPHHNENSPNSQMEIIAKVVP 325
F PDC N ++ LN +Q+ Q Q Q + G + P H + P +M +P
Sbjct: 506 FQQSAPDCFNNSNMGLNMLQQQQQQQQLRQQQQMRGLAPPPPHPQQQPQQRM----MTLP 561

Query: 326 ESVVFNDGQDKMAIDSVPVKAAPRSRCHWS 415
S GQ + + P+ A + H S
Sbjct: 562 MSQASPQGQQQFIGGASPLAAHSPASSHHS 591


>tr|Q6BMX1|Q6BMX1_DEBHA DEHA2F01958p OS=Debaryomyces hansenii
GN=DEHA2F01958g PE=4 SV=2
Length = 1007

Score = 35.0 bits (79), Expect = 2.9
Identities = 33/114 (28%), Positives = 52/114 (45%), Gaps = 21/114 (18%)
Frame = +2

Query: 68 MNHPHSVMSFASLTGSP-TGQTLHPSHFSSVFPDCPNEPSLDLNF------VQKLSQNSQ 226
+++ S++ L SP QT + S + P PSL+L+ Q+LSQ
Sbjct: 10 LSYSQSMLPSNLLVNSPYIQQTQNIVPMSPILPRQYAPPSLNLSHGNLAHHQQQLSQMHS 69

Query: 227 KAQNEFELGHSFHPHHNENSP-------NSQME-------IIAKVVPESVVFND 346
Q++ + HS HPH+ NSP NS +E +I K + E+V N+
Sbjct: 70 HHQHQNQQHHSQHPHYVPNSPYLTPLSSNSNLEQLNLSRTVILKNIDENVSLNE 123


>tr|A9RJ40|A9RJ40_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_66805 PE=4 SV=1
Length = 1483

Score = 34.7 bits (78), Expect = 3.7
Identities = 34/111 (30%), Positives = 42/111 (37%), Gaps = 2/111 (1%)
Frame = +2

Query: 71 NHPHSVMSFASLTGSPTGQTLHPSHFSSVFPDCPNEPSLDLNFVQKLSQNSQKAQNEFEL 250
+H HSV SL SPTG S + D P+ P S S ++NE E+
Sbjct: 922 SHSHSVKDEESLPSSPTG--------SVIIKDTPSPPG---------SPASNYSENESEI 964

Query: 251 GHSFHPHHNENSPNSQMEIIAKVVPESV--VFNDGQDKMAIDSVPVKAAPR 397
H F H SP V P SV D D+ A + V PR
Sbjct: 965 -HEFQSHSRAKSP---------VSPRSVAHALEDDHDERAGSNTGVPQDPR 1005


>tr|B6QHU4|B6QHU4_PENMA WD repeat protein OS=Penicillium marneffei
ATCC 18224 GN=PMAA_095430 PE=4 SV=1
Length = 1082

Score = 34.3 bits (77), Expect = 4.9
Identities = 33/116 (28%), Positives = 48/116 (41%), Gaps = 25/116 (21%)
Frame = +2

Query: 65 TMNHPHSVM------SFASLTGSPTGQTLHPSHFSSVFPDCPNEPSLDLNFV-QKLSQN- 220
T+ H H V S A+L + T TLH HF SV C LDLN++ Q++++N
Sbjct: 563 TLRHDHKVQIMARSPSIATLLATGTDSTLHLWHFDSVSQAC-----LDLNYMEQRITRNP 617

Query: 221 -----------------SQKAQNEFELGHSFHPHHNENSPNSQMEIIAKVVPESVV 337
S Q+ F G S + HH ++ + KV S+V
Sbjct: 618 RAIKESDFTPSSLAWGLSTLTQDLFVAGFSGNGHHGGDACREGLLAAWKVAQGSLV 673


>tr|Q484R9|Q484R9_COLP3 TonB-dependent receptor OS=Colwellia
psychrerythraea (strain 34H / ATCC BAA-681) GN=CPS_1708
PE=3 SV=1
Length = 817

Score = 33.9 bits (76), Expect = 6.4
Identities = 29/110 (26%), Positives = 53/110 (48%)
Frame = +2

Query: 113 SPTGQTLHPSHFSSVFPDCPNEPSLDLNFVQKLSQNSQKAQNEFELGHSFHPHHNENSPN 292
S G +L +S+F + + + L++V + +Q +EL + HHN N+
Sbjct: 624 SGPGDSLDGVKNASIFTNAIDSETFGLDWVNQYTQELSSMDVVYELSY----HHN-NTEV 678

Query: 293 SQMEIIAKVVPESVVFNDGQDKMAIDSVPVKAAPRSRCHWSHGEVMALFD 442
S + + +VP VVF++ Q ++ ++ KA P+ R S A+FD
Sbjct: 679 SAINTSSSIVPNEVVFDNAQ-RLLVE----KAQPQDRASLS-----AMFD 718