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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK954601
Clone id TST39A01NGRL0020_N24
Library
Length 612
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0020_N24. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
CTCCCCTTGCCCTTCCTCCTCTGCGTAACATTTTGTGAAGCGAGGGACGATCTGCCGTGA
AAGGGAGGTCGCCATGGCCGTCGTGGCATCGAAAGCTCTGTTGTCGTCCTCTCTCTCAAC
AACTACCGCTCCAGCGACTACCTCGCCCGACTGTTCCCGCCAGCAATTCTTGGGCGGGAG
GGCTCTCCGAGCAGCGGGCCCCTCTTCTTCCTCCAAGCGCGCGTCCTCCTTCACCGTTCG
CGCAACCGCCGATAAGCCCGTGAAGGTTGACAGGCAGTTATGGTTTGCCTCCAAGCAAAG
TCTAAGCTATCTAGATGGCAGCCTTCCTGGTGACTTTGGGTTTGATCCCTTGGGTTTGAT
GGACCCAGAGGGGCCTGGAGGCTTCATTGAACCTGATTGGTTGAGGTATGGAGAAATCAT
CAATGGAAGATATGCAATGTTGGGTGCCGTTGGAGCTATTGCGCCAGAGATCCTTGGCAA
GGCTGGTCTCATCCCTCAAGAAACCGCTGTCGTATGGTTTAGGACTGGAGTGATCCCACC
TCTAGGAACCTACAACTACTGGGCAGATCCCTACACGCTATTCGTCCTTGAGATGGCCCT
CATGGGCTTTGC
■■Homology search results ■■ -
sp_hit_id P27522
Definition sp|P27522|CB13_SOLLC Chlorophyll a-b binding protein 8, chloroplastic OS=Solanum lycopersicum
Align length 129
Score (bit) 223.0
E-value 5.0e-58
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK954601|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0020_N24, 5'
         (612 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P27522|CB13_SOLLC Chlorophyll a-b binding protein 8, chloropl...   223   5e-58
sp|Q32904|CB23_PEA Chlorophyll a-b binding protein 3, chloroplas...   221   2e-57
sp|P10708|CB12_SOLLC Chlorophyll a-b binding protein 7, chloropl...    94   7e-19
sp|P13869|CB12_PETHY Chlorophyll a-b binding protein, chloroplas...    91   5e-18
sp|Q9SQL2|CB24_PEA Chlorophyll a-b binding protein P4, chloropla...    74   6e-13
sp|P27521|CB24_ARATH Chlorophyll a-b binding protein 4, chloropl...    72   2e-12
sp|Q36718|CB120_HORVU Chlorophyll a-b binding protein 1B-20, chl...    72   3e-12
sp|Q10HD0|CB23_ORYSJ Chlorophyll a-b binding protein, chloroplas...    62   2e-09
sp|A2XJ35|CB23_ORYSI Chlorophyll a-b binding protein, chloroplas...    62   2e-09
sp|P12062|CB26_PETSP Chlorophyll a-b binding protein 37, chlorop...    62   2e-09
sp|P12333|CB2A_SPIOL Chlorophyll a-b binding protein, chloroplas...    61   5e-09
sp|P12328|CB21_LEMGI Chlorophyll a-b binding protein of LHCII ty...    60   7e-09
sp|P14279|CB25_SOLLC Chlorophyll a-b binding protein 5, chloropl...    60   9e-09
sp|P14278|CB24_SOLLC Chlorophyll a-b binding protein 4, chloropl...    60   1e-08
sp|P27523|CB23_HORVU Chlorophyll a-b binding protein of LHCII ty...    60   1e-08
sp|P04778|CB22_ARATH Chlorophyll a-b binding protein 2, chloropl...    60   1e-08
sp|P08221|CB21_CUCSA Chlorophyll a-b binding protein of LHCII ty...    60   1e-08
sp|P27494|CB23_TOBAC Chlorophyll a-b binding protein 36, chlorop...    59   1e-08
sp|P36494|CB4_SPIOL Chlorophyll a-b binding protein CP24, chloro...    59   2e-08
sp|P04777|CB21_ARATH Chlorophyll a-b binding protein 165/180, ch...    59   2e-08
sp|P27489|CB23_SOLLC Chlorophyll a-b binding protein 13, chlorop...    59   3e-08
sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 memb...    59   3e-08
sp|P08963|CB22_HORVU Chlorophyll a-b binding protein 2, chloropl...    58   3e-08
sp|P27518|CB21_GOSHI Chlorophyll a-b binding protein 151, chloro...    58   3e-08
sp|P92919|CB23_APIGR Chlorophyll a-b binding protein, chloroplas...    58   4e-08
sp|P27490|CB28_PEA Chlorophyll a-b binding protein 8, chloroplas...    57   6e-08
sp|P12332|CB21_SILPR Chlorophyll a-b binding protein, chloroplas...    57   6e-08
sp|P12330|CB21_ORYSJ Chlorophyll a-b binding protein 1, chloropl...    57   6e-08
sp|Q9SDM1|CB121_HORVU Chlorophyll a-b binding protein 1B-21, chl...    57   6e-08
sp|P07371|CB22_PEA Chlorophyll a-b binding protein AB80, chlorop...    57   7e-08

>sp|P27522|CB13_SOLLC Chlorophyll a-b binding protein 8,
           chloroplastic OS=Solanum lycopersicum GN=CAB8 PE=3 SV=1
          Length = 273

 Score =  223 bits (569), Expect = 5e-58
 Identities = 107/129 (82%), Positives = 113/129 (87%), Gaps = 2/129 (1%)
 Frame = +2

Query: 230 FTVRATADKPVK--VDRQLWFASKQSLSYLDGSLPGDFGFDPLGLMDPEGPGGFIEPDWL 403
           F VRA +  PVK   +RQLWFASKQSLSYLDG LPGDFGFDPLGL DPEG GGFIEP WL
Sbjct: 37  FVVRAASTPPVKQGANRQLWFASKQSLSYLDGRLPGDFGFDPLGLSDPEGTGGFIEPKWL 96

Query: 404 RYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAVVWFRTGVIPPLGTYNYWADPYTLF 583
            YGE+INGR+AMLGA GAIAPEILGKAGLIPQETA+ WF+TGVIPP GTYNYWAD YTLF
Sbjct: 97  AYGEVINGRFAMLGAAGAIAPEILGKAGLIPQETALAWFQTGVIPPAGTYNYWADNYTLF 156

Query: 584 VLEMALMGF 610
           VLEMALMGF
Sbjct: 157 VLEMALMGF 165


>sp|Q32904|CB23_PEA Chlorophyll a-b binding protein 3, chloroplastic
           OS=Pisum sativum GN=lhca3 PE=1 SV=1
          Length = 275

 Score =  221 bits (564), Expect = 2e-57
 Identities = 107/128 (83%), Positives = 112/128 (87%), Gaps = 3/128 (2%)
 Frame = +2

Query: 236 VRATADKPVK---VDRQLWFASKQSLSYLDGSLPGDFGFDPLGLMDPEGPGGFIEPDWLR 406
           VRA A  PVK   VDR LWFASKQSLSYLDGSLPGD+GFDPLGL DPEG GGFIEP WL 
Sbjct: 40  VRAAATPPVKQGGVDRPLWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLA 99

Query: 407 YGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAVVWFRTGVIPPLGTYNYWADPYTLFV 586
           YGE+INGR+AMLGAVGAIAPE LGK GLIPQETA+ WF+TGVIPP GTYNYWAD YTLFV
Sbjct: 100 YGEVINGRFAMLGAVGAIAPEYLGKVGLIPQETALAWFQTGVIPPAGTYNYWADNYTLFV 159

Query: 587 LEMALMGF 610
           LEMALMGF
Sbjct: 160 LEMALMGF 167


>sp|P10708|CB12_SOLLC Chlorophyll a-b binding protein 7,
           chloroplastic OS=Solanum lycopersicum GN=CAB7 PE=3 SV=1
          Length = 270

 Score = 93.6 bits (231), Expect = 7e-19
 Identities = 59/153 (38%), Positives = 79/153 (51%), Gaps = 1/153 (0%)
 Frame = +2

Query: 155 SRQQFLGGRALRAAGPXXXXXXXXXFTVRATADKPVKVDRQLWFASKQSLSYLDGSLPGD 334
           ++  FLGGR LR +            TV   AD     DR LWF       +LDGSLPGD
Sbjct: 30  TKASFLGGRRLRVSKYSTTPTARSATTVCVAADP----DRPLWFPGSTPPPWLDGSLPGD 85

Query: 335 FGFDPLGL-MDPEGPGGFIEPDWLRYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAV 511
           FGFDPLGL  DPE         W +  E+++ R+AMLGA G   PE+L K G++   +  
Sbjct: 86  FGFDPLGLASDPE------SLRWNQQAELVHCRWAMLGAAGIFIPELLTKIGILNTPS-- 137

Query: 512 VWFRTGVIPPLGTYNYWADPYTLFVLEMALMGF 610
            W+        G   Y+ D  TLF++E+ L+G+
Sbjct: 138 -WYTA------GEQEYFTDTTTLFIVELVLIGW 163



 Score = 33.9 bits (76), Expect = 0.67
 Identities = 23/52 (44%), Positives = 26/52 (50%)
 Frame = +2

Query: 302 LSYLDGSLPGDFGFDPLGLMDPEGPGGFIEPDWLRYGEIINGRYAMLGAVGA 457
           L+  D   PG   FDPLG     G G   +   LR  EI NGR AML  +GA
Sbjct: 189 LTGTDVGYPGGLWFDPLGW----GSGSPAKIKELRTKEIKNGRLAMLAVMGA 236


>sp|P13869|CB12_PETHY Chlorophyll a-b binding protein, chloroplastic
           OS=Petunia hybrida PE=2 SV=1
          Length = 270

 Score = 90.9 bits (224), Expect = 5e-18
 Identities = 59/153 (38%), Positives = 77/153 (50%), Gaps = 1/153 (0%)
 Frame = +2

Query: 155 SRQQFLGGRALRAAGPXXXXXXXXXFTVRATADKPVKVDRQLWFASKQSLSYLDGSLPGD 334
           ++  FLGG+ LR +             V A A  P   DR LWF       +LDGSLPGD
Sbjct: 30  TKASFLGGKRLRVS-KFIAPVGSRSVAVSAVAADP---DRPLWFPGSTPPEWLDGSLPGD 85

Query: 335 FGFDPLGL-MDPEGPGGFIEPDWLRYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAV 511
           FGFDPLGL  DPE         W    E+++ R+AMLGA G   PE L K G++   +  
Sbjct: 86  FGFDPLGLGSDPE------SLKWNAQAELVHSRWAMLGAAGIFIPEFLTKIGVLNTPS-- 137

Query: 512 VWFRTGVIPPLGTYNYWADPYTLFVLEMALMGF 610
            W+        G   Y+ D  TLFV+E+ L+G+
Sbjct: 138 -WYTA------GEQEYFTDTTTLFVIELVLIGW 163



 Score = 33.9 bits (76), Expect = 0.67
 Identities = 23/52 (44%), Positives = 26/52 (50%)
 Frame = +2

Query: 302 LSYLDGSLPGDFGFDPLGLMDPEGPGGFIEPDWLRYGEIINGRYAMLGAVGA 457
           L+  D   PG   FDPLG     G G   +   LR  EI NGR AML  +GA
Sbjct: 189 LTGTDVGYPGGLWFDPLGW----GSGSPAKIKELRTKEIKNGRLAMLAVMGA 236


>sp|Q9SQL2|CB24_PEA Chlorophyll a-b binding protein P4,
           chloroplastic OS=Pisum sativum GN=lhcA-P4 PE=1 SV=1
          Length = 252

 Score = 73.9 bits (180), Expect = 6e-13
 Identities = 51/149 (34%), Positives = 69/149 (46%), Gaps = 1/149 (0%)
 Frame = +2

Query: 158 RQQFLGGRALRAAGPXXXXXXXXXFTVRATADKPVKVDRQLWFASKQSLSYLDGSLPGDF 337
           + +FLGG    ++G               +A   V+  +  W     S  YL GSLPGD 
Sbjct: 19  KSRFLGG----SSGKLNRGVAFRPVGCSPSASFKVEAKKGEWLPGLASPGYLTGSLPGDN 74

Query: 338 GFDPLGLM-DPEGPGGFIEPDWLRYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAVV 514
           GFDPLGL  DPE    F++       E++NGR+AMLG  G + PE+    G+I       
Sbjct: 75  GFDPLGLAEDPENLRWFVQ------AELVNGRWAMLGVAGMLLPEVFTSIGII---NVPK 125

Query: 515 WFRTGVIPPLGTYNYWADPYTLFVLEMAL 601
           W+        G   Y+A   TLFV+E  L
Sbjct: 126 WYAA------GKEEYFASSSTLFVIEFIL 148


>sp|P27521|CB24_ARATH Chlorophyll a-b binding protein 4,
           chloroplastic OS=Arabidopsis thaliana GN=CAB4 PE=1 SV=1
          Length = 251

 Score = 72.4 bits (176), Expect = 2e-12
 Identities = 46/123 (37%), Positives = 61/123 (49%), Gaps = 1/123 (0%)
 Frame = +2

Query: 245 TADKPVKVDRQLWFASKQSLSYLDGSLPGDFGFDPLGLM-DPEGPGGFIEPDWLRYGEII 421
           T+   V+  +  W     S  YL GSL GD GFDPLGL  DPE    F++       E++
Sbjct: 45  TSSFKVEAKKGEWLPGLASPDYLTGSLAGDNGFDPLGLAEDPENLKWFVQ------AELV 98

Query: 422 NGRYAMLGAVGAIAPEILGKAGLIPQETAVVWFRTGVIPPLGTYNYWADPYTLFVLEMAL 601
           NGR+AMLG  G + PE+  K G+I       W+        G   Y+A   TLFV+E  L
Sbjct: 99  NGRWAMLGVAGMLLPEVFTKIGII---NVPEWY------DAGKEQYFASSSTLFVIEFIL 149

Query: 602 MGF 610
             +
Sbjct: 150 FHY 152


>sp|Q36718|CB120_HORVU Chlorophyll a-b binding protein 1B-20,
           chloroplastic (Fragment) OS=Hordeum vulgare GN=LHC Ib-20
           PE=1 SV=1
          Length = 231

 Score = 71.6 bits (174), Expect = 3e-12
 Identities = 46/107 (42%), Positives = 59/107 (55%), Gaps = 1/107 (0%)
 Frame = +2

Query: 281 WFASKQSLSYLDGSLPGDFGFDPLGLM-DPEGPGGFIEPDWLRYGEIINGRYAMLGAVGA 457
           W    QS +YLDGSL GD GFDPL L  DPE    F++ D      ++NGR+AMLG  G 
Sbjct: 36  WLPGLQSPAYLDGSLEGDNGFDPLALAEDPEDLRWFVQAD------VVNGRWAMLGVAGM 89

Query: 458 IAPEILGKAGLIPQETAVVWFRTGVIPPLGTYNYWADPYTLFVLEMA 598
           + PE+L KAGL+    A  W R   +P  G   Y+A   T   + M+
Sbjct: 90  LIPEVLTKAGLM---NAPEWLR---LP--GKETYFASSSTALRVHMS 128


>sp|Q10HD0|CB23_ORYSJ Chlorophyll a-b binding protein, chloroplastic
           OS=Oryza sativa subsp. japonica GN=RCABP89 PE=2 SV=1
          Length = 263

 Score = 62.4 bits (150), Expect = 2e-09
 Identities = 46/117 (39%), Positives = 64/117 (54%), Gaps = 10/117 (8%)
 Frame = +2

Query: 290 SKQSLSYLDGSLPGDFGFDPLGLM-DPEGPGGFIEPDWLRYGEIINGRYAMLGAVGAIAP 466
           S+Q+ SYL G  PGD+G+D  GL  DPE    F     L   E+I+ R+AMLGA+G + P
Sbjct: 60  SEQTPSYLTGEFPGDYGWDTAGLSADPET---FARNREL---EVIHSRWAMLGALGCVFP 113

Query: 467 EILGKAGLIPQETAVVWFRTGV-IPPLGTYNYWADP--------YTLFVLEMALMGF 610
           EIL K G+   E   VWF+ G  I   G  +Y  +P          ++ +++ LMGF
Sbjct: 114 EILSKNGVKFGE--AVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWAVQVVLMGF 168


>sp|A2XJ35|CB23_ORYSI Chlorophyll a-b binding protein, chloroplastic
           OS=Oryza sativa subsp. indica GN=OsI_012078 PE=2 SV=1
          Length = 263

 Score = 62.4 bits (150), Expect = 2e-09
 Identities = 46/117 (39%), Positives = 64/117 (54%), Gaps = 10/117 (8%)
 Frame = +2

Query: 290 SKQSLSYLDGSLPGDFGFDPLGLM-DPEGPGGFIEPDWLRYGEIINGRYAMLGAVGAIAP 466
           S+Q+ SYL G  PGD+G+D  GL  DPE    F     L   E+I+ R+AMLGA+G + P
Sbjct: 60  SEQTPSYLTGEFPGDYGWDTAGLSADPET---FARNREL---EVIHSRWAMLGALGCVFP 113

Query: 467 EILGKAGLIPQETAVVWFRTGV-IPPLGTYNYWADP--------YTLFVLEMALMGF 610
           EIL K G+   E   VWF+ G  I   G  +Y  +P          ++ +++ LMGF
Sbjct: 114 EILSKNGVKFGE--AVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWAVQVVLMGF 168


>sp|P12062|CB26_PETSP Chlorophyll a-b binding protein 37,
           chloroplastic OS=Petunia sp. GN=CAB37 PE=3 SV=1
          Length = 265

 Score = 62.0 bits (149), Expect = 2e-09
 Identities = 52/145 (35%), Positives = 73/145 (50%), Gaps = 21/145 (14%)
 Frame = +2

Query: 239 RATADKPVK-VDRQLWFA----------SKQSLSYLDGSLPGDFGFDPLGLM-DPEGPGG 382
           RAT  + VK   + +W+           S+Q+ SYL G  PGD+G+D  GL  DPE    
Sbjct: 34  RATMRRTVKSAPQSIWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPET--- 90

Query: 383 FIEPDWLRYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAVVWFRTG-VIPPLGTYNY 559
           F     L   E+I+ R+AMLGA+G + PEIL K G+   E   VWF+ G  I   G  +Y
Sbjct: 91  FARNREL---EVIHCRWAMLGALGCVFPEILSKNGVTFGE--AVWFKAGSQIFSEGGLDY 145

Query: 560 WADP--------YTLFVLEMALMGF 610
             +P          ++  ++ LMGF
Sbjct: 146 LGNPNLIHAQSILAIWAAQVVLMGF 170
tr_hit_id Q02071
Definition tr|Q02071|Q02071_PINSY Type III chlorophyll a /b-binding protein OS=Pinus sylvestris
Align length 154
Score (bit) 234.0
E-value 3.0e-60
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK954601|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0020_N24, 5'
         (612 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q02071|Q02071_PINSY Type III chlorophyll a /b-binding protein...   234   3e-60
tr|A9NZR0|A9NZR0_PICSI Putative uncharacterized protein OS=Picea...   231   2e-59
tr|A9PK62|A9PK62_POPJC Putative uncharacterized protein OS=Popul...   227   5e-58
tr|A9PE75|A9PE75_POPTR Putative uncharacterized protein OS=Popul...   227   5e-58
tr|A0FHB5|A0FHB5_LYCAU Type III chlorophyll a/b-binding protein ...   224   2e-57
tr|A0FHB6|A0FHB6_LYCAU Type III chlorophyll a/b-binding protein ...   224   4e-57
tr|A7PSQ5|A7PSQ5_VITVI Chromosome chr6 scaffold_28, whole genome...   223   9e-57
tr|B6SUC4|B6SUC4_MAIZE Chlorophyll a-b binding protein 8 OS=Zea ...   217   4e-55
tr|Q9SY97|Q9SY97_ARATH PSI type III chlorophyll a/b-binding prot...   214   2e-54
tr|Q0WR83|Q0WR83_ARATH PSI type III chlorophyll a/b-binding prot...   214   2e-54
tr|Q43381|Q43381_ARATH PSI type III chlorophyll a/b-binding prot...   211   2e-53
tr|Q6H748|Q6H748_ORYSJ Os02g0197600 protein OS=Oryza sativa subs...   211   3e-53
tr|A2X218|A2X218_ORYSI Putative uncharacterized protein OS=Oryza...   211   3e-53
tr|Q8LCR7|Q8LCR7_ARATH PSI type III chlorophyll a/b-binding prot...   207   4e-52
tr|A9U226|A9U226_PHYPA Predicted protein (Fragment) OS=Physcomit...   202   2e-50
tr|A9TEM8|A9TEM8_PHYPA Predicted protein OS=Physcomitrella paten...   202   2e-50
tr|A9TEM7|A9TEM7_PHYPA Predicted protein (Fragment) OS=Physcomit...   202   2e-50
tr|A9TB65|A9TB65_PHYPA Predicted protein (Fragment) OS=Physcomit...   201   3e-50
tr|Q2V2R9|Q2V2R9_ARATH Uncharacterized protein At1g61520.2 OS=Ar...   178   2e-43
tr|Q9M538|Q9M538_ALOME Chlorophyll a/b-binding protein type III ...   177   3e-43
tr|B5KV37|B5KV37_HELAN Chloroplast PSI type III chlorophyll a/b-...   174   4e-42
tr|B5KV22|B5KV22_HELAN Chloroplast PSI type III chlorophyll a/b-...   174   4e-42
tr|A4QPL5|A4QPL5_MESVI Chloroplast light-harvesting complex I pr...   171   2e-41
tr|A2SY14|A2SY14_MESVI Light-harvesting chlorophyll-a/b binding ...   171   2e-41
tr|A4QPN5|A4QPN5_9CHLO Chloroplast light-harvesting complex I pr...   167   4e-40
tr|Q75VY9|Q75VY9_CHLRE Light-harvesting chlorophyll-a/b protein ...   166   1e-39
tr|A8JF10|A8JF10_CHLRE Light-harvesting chlorophyll-a/b protein ...   166   1e-39
tr|A4S9V8|A4S9V8_OSTLU Photosystem I light harvesting complex, c...   164   4e-39
tr|A4QPK1|A4QPK1_ACEAT Chloroplast light-harvesting complex I pr...   162   1e-38
tr|A2SY38|A2SY38_CHLIN Light-harvesting chlorophyll-a/b binding ...   162   1e-38

>tr|Q02071|Q02071_PINSY Type III chlorophyll a /b-binding protein
           OS=Pinus sylvestris GN=lhaC1 PE=2 SV=1
          Length = 286

 Score =  234 bits (597), Expect = 3e-60
 Identities = 118/154 (76%), Positives = 128/154 (83%), Gaps = 3/154 (1%)
 Frame = +2

Query: 158 RQQFLGGRALRAAGPXXXXXXXXXFTVR--ATADKPVKV-DRQLWFASKQSLSYLDGSLP 328
           +Q  LGG+AL              FTVR  A+++KPVK  DRQLWFAS QSLSYLDGSLP
Sbjct: 25  QQLLLGGKALVLPPYFSQSSRRTSFTVRSQASSNKPVKQGDRQLWFASDQSLSYLDGSLP 84

Query: 329 GDFGFDPLGLMDPEGPGGFIEPDWLRYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETA 508
           GD+GFDPLGLMDPEGPGGF+EP WL YGEIINGRYAMLGAVGAIAPEILGK GLIPQETA
Sbjct: 85  GDYGFDPLGLMDPEGPGGFMEPGWLVYGEIINGRYAMLGAVGAIAPEILGKLGLIPQETA 144

Query: 509 VVWFRTGVIPPLGTYNYWADPYTLFVLEMALMGF 610
           + WF+TGVIPP GTYNYWADP+TLFVLEMALMGF
Sbjct: 145 LPWFQTGVIPPAGTYNYWADPFTLFVLEMALMGF 178


>tr|A9NZR0|A9NZR0_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 289

 Score =  231 bits (589), Expect = 2e-59
 Identities = 113/130 (86%), Positives = 119/130 (91%), Gaps = 3/130 (2%)
 Frame = +2

Query: 230 FTVR--ATADKPVKV-DRQLWFASKQSLSYLDGSLPGDFGFDPLGLMDPEGPGGFIEPDW 400
           F VR  A++ KPVK  DRQLWFASKQSLSYLDGSLPGD+GFDPLGLMDPEGPGGFIEP W
Sbjct: 51  FAVRSQASSGKPVKQGDRQLWFASKQSLSYLDGSLPGDYGFDPLGLMDPEGPGGFIEPGW 110

Query: 401 LRYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAVVWFRTGVIPPLGTYNYWADPYTL 580
           L YGEIINGRYAMLGAVGAIAPEILGK GLIPQETA+ WFRTGVIPP GTY+YWADP+TL
Sbjct: 111 LAYGEIINGRYAMLGAVGAIAPEILGKLGLIPQETALPWFRTGVIPPAGTYDYWADPFTL 170

Query: 581 FVLEMALMGF 610
           FVLEMALMGF
Sbjct: 171 FVLEMALMGF 180


>tr|A9PK62|A9PK62_POPJC Putative uncharacterized protein OS=Populus
           jackii PE=2 SV=1
          Length = 274

 Score =  227 bits (578), Expect = 5e-58
 Identities = 110/128 (85%), Positives = 114/128 (89%), Gaps = 1/128 (0%)
 Frame = +2

Query: 230 FTVRATADKPVKV-DRQLWFASKQSLSYLDGSLPGDFGFDPLGLMDPEGPGGFIEPDWLR 406
           F VRA +  PVK  +RQLWFASKQSLSYLDGSLPGDFGFDPLGL DPEG GGFIEP WL 
Sbjct: 39  FVVRAASTPPVKQGNRQLWFASKQSLSYLDGSLPGDFGFDPLGLSDPEGTGGFIEPKWLA 98

Query: 407 YGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAVVWFRTGVIPPLGTYNYWADPYTLFV 586
           YGEIINGRYAMLGAVGAIAPEILGKAGLIP ETA+ WFRTGVIPP GTY+YWADPYTLFV
Sbjct: 99  YGEIINGRYAMLGAVGAIAPEILGKAGLIPPETALPWFRTGVIPPAGTYSYWADPYTLFV 158

Query: 587 LEMALMGF 610
            EMALMGF
Sbjct: 159 FEMALMGF 166


>tr|A9PE75|A9PE75_POPTR Putative uncharacterized protein OS=Populus
           trichocarpa PE=2 SV=1
          Length = 274

 Score =  227 bits (578), Expect = 5e-58
 Identities = 110/128 (85%), Positives = 114/128 (89%), Gaps = 1/128 (0%)
 Frame = +2

Query: 230 FTVRATADKPVKV-DRQLWFASKQSLSYLDGSLPGDFGFDPLGLMDPEGPGGFIEPDWLR 406
           F VRA +  PVK  +RQLWFASKQSLSYLDGSLPGDFGFDPLGL DPEG GGFIEP WL 
Sbjct: 39  FVVRAASTPPVKQGNRQLWFASKQSLSYLDGSLPGDFGFDPLGLSDPEGTGGFIEPKWLA 98

Query: 407 YGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAVVWFRTGVIPPLGTYNYWADPYTLFV 586
           YGEIINGRYAMLGAVGAIAPEILGKAGLIP ETA+ WFRTGVIPP GTY+YWADPYTLFV
Sbjct: 99  YGEIINGRYAMLGAVGAIAPEILGKAGLIPPETALPWFRTGVIPPAGTYSYWADPYTLFV 158

Query: 587 LEMALMGF 610
            EMALMGF
Sbjct: 159 FEMALMGF 166


>tr|A0FHB5|A0FHB5_LYCAU Type III chlorophyll a/b-binding protein
           OS=Lycoris aurea PE=2 SV=1
          Length = 275

 Score =  224 bits (572), Expect = 2e-57
 Identities = 112/153 (73%), Positives = 120/153 (78%), Gaps = 3/153 (1%)
 Frame = +2

Query: 161 QQFLGGRALR-AAGPXXXXXXXXXFTVRATADKPVK--VDRQLWFASKQSLSYLDGSLPG 331
           +Q LGGR ++              F V+A +  PVK   DRQLWFASKQSLSYLDGSLPG
Sbjct: 15  RQLLGGRPVQWTPSRSFSSSRKASFVVKAASTPPVKQGADRQLWFASKQSLSYLDGSLPG 74

Query: 332 DFGFDPLGLMDPEGPGGFIEPDWLRYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAV 511
           DFGFDPLGL DPEG GGFIEP WL YGEIINGRYAMLG  GAIAPEILGK GLIP ETA+
Sbjct: 75  DFGFDPLGLSDPEGTGGFIEPKWLAYGEIINGRYAMLGVAGAIAPEILGKLGLIPPETAL 134

Query: 512 VWFRTGVIPPLGTYNYWADPYTLFVLEMALMGF 610
            WF+TGVIPP GTY+YWADPYTLFVLEMALMGF
Sbjct: 135 PWFQTGVIPPAGTYSYWADPYTLFVLEMALMGF 167


>tr|A0FHB6|A0FHB6_LYCAU Type III chlorophyll a/b-binding protein
           OS=Lycoris aurea PE=2 SV=1
          Length = 275

 Score =  224 bits (570), Expect = 4e-57
 Identities = 112/153 (73%), Positives = 120/153 (78%), Gaps = 3/153 (1%)
 Frame = +2

Query: 161 QQFLGGRALR-AAGPXXXXXXXXXFTVRATADKPVK--VDRQLWFASKQSLSYLDGSLPG 331
           +Q LGGR ++              F V+A +  PVK   DRQLWFASKQSLSYLDGSLPG
Sbjct: 15  RQLLGGRPVQWTPTRSFSSSRKASFVVKAASTPPVKQGADRQLWFASKQSLSYLDGSLPG 74

Query: 332 DFGFDPLGLMDPEGPGGFIEPDWLRYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAV 511
           DFGFDPLGL DPEG GGFIEP WL YGEIINGRYAMLG  GAIAPEILGK GLIP ETA+
Sbjct: 75  DFGFDPLGLSDPEGTGGFIEPKWLAYGEIINGRYAMLGVAGAIAPEILGKLGLIPPETAL 134

Query: 512 VWFRTGVIPPLGTYNYWADPYTLFVLEMALMGF 610
            WF+TGVIPP GTY+YWADPYTLFVLEMALMGF
Sbjct: 135 PWFQTGVIPPAGTYSYWADPYTLFVLEMALMGF 167


>tr|A7PSQ5|A7PSQ5_VITVI Chromosome chr6 scaffold_28, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00023035001
           PE=4 SV=1
          Length = 274

 Score =  223 bits (567), Expect = 9e-57
 Identities = 110/152 (72%), Positives = 119/152 (78%), Gaps = 2/152 (1%)
 Frame = +2

Query: 161 QQFLGGRALRAAGPXXXXXXXXXFTVRATADKPVK--VDRQLWFASKQSLSYLDGSLPGD 334
           +Q LG R L++            F VRA +  PVK   DR LWFASKQSL+YLDGSLPGD
Sbjct: 19  RQILGSRPLQSPS-----RKSSSFVVRAASTPPVKQGADRPLWFASKQSLTYLDGSLPGD 73

Query: 335 FGFDPLGLMDPEGPGGFIEPDWLRYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAVV 514
           +GFDPLGL DPEG GGFIEP WL YGE+INGRYAMLGAVGAIAPEILGK GLIP ETA+ 
Sbjct: 74  YGFDPLGLSDPEGTGGFIEPRWLAYGEVINGRYAMLGAVGAIAPEILGKLGLIPPETALP 133

Query: 515 WFRTGVIPPLGTYNYWADPYTLFVLEMALMGF 610
           WF+TGV PP GTYNYWADPYTLFV EMALMGF
Sbjct: 134 WFKTGVFPPAGTYNYWADPYTLFVFEMALMGF 165


>tr|B6SUC4|B6SUC4_MAIZE Chlorophyll a-b binding protein 8 OS=Zea
           mays PE=2 SV=1
          Length = 267

 Score =  217 bits (553), Expect = 4e-55
 Identities = 102/129 (79%), Positives = 110/129 (85%), Gaps = 2/129 (1%)
 Frame = +2

Query: 230 FTVRATADKPVK--VDRQLWFASKQSLSYLDGSLPGDFGFDPLGLMDPEGPGGFIEPDWL 403
           F VRA++  P K   DRQLWFASKQSLSYLDG+LPGD+GFDPLGL DPEG GGFIEP WL
Sbjct: 31  FVVRASSSPPAKQGADRQLWFASKQSLSYLDGTLPGDYGFDPLGLSDPEGTGGFIEPKWL 90

Query: 404 RYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAVVWFRTGVIPPLGTYNYWADPYTLF 583
            YGE+INGRYAMLGAVGAIAPEI GK G+IP ETA+ WF+TGVIPP GTYNYWAD YTLF
Sbjct: 91  AYGEVINGRYAMLGAVGAIAPEIFGKMGIIPPETALPWFKTGVIPPAGTYNYWADSYTLF 150

Query: 584 VLEMALMGF 610
           V  MALMGF
Sbjct: 151 VFNMALMGF 159


>tr|Q9SY97|Q9SY97_ARATH PSI type III chlorophyll a/b-binding protein
           OS=Arabidopsis thaliana GN=At1g61520/T25B24.12 PE=2 SV=1
          Length = 273

 Score =  214 bits (546), Expect = 2e-54
 Identities = 104/129 (80%), Positives = 110/129 (85%), Gaps = 2/129 (1%)
 Frame = +2

Query: 230 FTVRATADKPVK--VDRQLWFASKQSLSYLDGSLPGDFGFDPLGLMDPEGPGGFIEPDWL 403
           F V+A A  PVK   +R LWFAS QSLSYLDGSLPGD+GFDPLGL DPEG GGFIEP WL
Sbjct: 37  FVVKAAATPPVKQGANRPLWFASSQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWL 96

Query: 404 RYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAVVWFRTGVIPPLGTYNYWADPYTLF 583
            YGEIINGR+AMLGA GAIAPEILGKAGLIP ETA+ WF+TGVIPP GTY YWAD YTLF
Sbjct: 97  AYGEIINGRFAMLGAAGAIAPEILGKAGLIPAETALPWFQTGVIPPAGTYTYWADNYTLF 156

Query: 584 VLEMALMGF 610
           VLEMALMGF
Sbjct: 157 VLEMALMGF 165


>tr|Q0WR83|Q0WR83_ARATH PSI type III chlorophyll a/b-binding protein
           OS=Arabidopsis thaliana GN=At1g61520 PE=2 SV=1
          Length = 273

 Score =  214 bits (546), Expect = 2e-54
 Identities = 104/129 (80%), Positives = 110/129 (85%), Gaps = 2/129 (1%)
 Frame = +2

Query: 230 FTVRATADKPVK--VDRQLWFASKQSLSYLDGSLPGDFGFDPLGLMDPEGPGGFIEPDWL 403
           F V+A A  PVK   +R LWFAS QSLSYLDGSLPGD+GFDPLGL DPEG GGFIEP WL
Sbjct: 37  FVVKAAATPPVKQGANRPLWFASSQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWL 96

Query: 404 RYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAVVWFRTGVIPPLGTYNYWADPYTLF 583
            YGEIINGR+AMLGA GAIAPEILGKAGLIP ETA+ WF+TGVIPP GTY YWAD YTLF
Sbjct: 97  AYGEIINGRFAMLGAAGAIAPEILGKAGLIPAETALPWFQTGVIPPAGTYTYWADNYTLF 156

Query: 584 VLEMALMGF 610
           VLEMALMGF
Sbjct: 157 VLEMALMGF 165