DK954619
Clone id TST39A01NGRL0020_O19
Library
Length 787
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0020_O19. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence
CACACAAGCAGCAGGTCGAAACTATGGCTACACATGAAGATCACGACATAGGCGCGCCTG
CAGCGATGGAAAGCCCATCGACTACAACAAACACGCATGACACTGGTGCTGCTACCAGTC
ATCATTTGACGAGCTTCTACTGGGGCCATCTTGCTACCCTTCAGTTTGACGACTGGCGGA
CGATTTCGCAGGGCACCTACGTCGCCTCTCTGCTGGCCCTCCTACTCATCTCCTTCCTCT
ACCAATACCTTGAGCGCCTCACTTCGCCCTCCTCCCCTATCCTCTTGCCCTATTCCTCCT
CCTCTTCCTCATGCTGTCCAACCACCCCTCACAACAATAACAATCATTCTAAACCAATTT
CCCCTTCCCCCCACCAGCTACCCCTCCCCACCAAACTCCTCCTCACTTTGCTCTTCTCCC
TCCGCGTCGGCCTCGCCTACCTTCTCATGCTCGCCGTCATGTCCTTCAACGGCGGCGTCT
TCCTCGCCGTCATCCTCGGACTCTCTGCTGGCTTCTTCGTCTTCCGCACAGACATCCATA
CGCCCAAATGTGTGCCGGTACTTTCAGCCTCTGATGGCAATCTCCACCCTTGAATCCAGC
TGGCGCAGACACCCCTTGTTAGGGGCTCAAATATATATTGCAAGTTCACCCCTCCTACCC
TTCCTTGGCTGGTTAAGGTAGGATAGAATGGTAAAAGGGGATAAGGTTTATGGGGGGGGG
TAAAAGTTTAATGGAAATGGGACAAAAGGGCCAAATTTTTAAAGGCCAAAAAAAAAAAAA
AAAAAAA
■■Homology search results ■■ -
sp_hit_id Q39065
Definition sp|Q39065|COPT1_ARATH Copper transporter 1 OS=Arabidopsis thaliana
Align length 37
Score (bit) 52.4
E-value 3.0e-06
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK954619|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0020_O19, 5'
(767 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q39065|COPT1_ARATH Copper transporter 1 OS=Arabidopsis thalia... 52 3e-06
sp|O15432|COPT2_HUMAN Probable low affinity copper uptake protei... 39 0.041
sp|Q9CPU9|COPT2_MOUSE Probable low affinity copper uptake protei... 38 0.054
sp|Q06686|CTR3_YEAST Copper transport protein CTR3 OS=Saccharomy... 35 0.35
sp|Q9P7F9|CTR5_SCHPO Copper transport protein ctr5 OS=Schizosacc... 34 0.78
sp|P38865|CTR2_YEAST Copper transport protein CTR2 OS=Saccharomy... 34 0.78
sp|Q9JK41|COPT1_RAT High affinity copper uptake protein 1 OS=Rat... 34 0.78
sp|Q5RAS6|COPT1_PONAB High affinity copper uptake protein 1 OS=P... 34 0.78
sp|Q8WNR0|COPT1_PIG High affinity copper uptake protein 1 OS=Sus... 34 0.78
sp|Q8K211|COPT1_MOUSE High affinity copper uptake protein 1 OS=M... 34 0.78
sp|O15431|COPT1_HUMAN High affinity copper uptake protein 1 OS=H... 34 0.78
sp|O94722|CTR4_SCHPO Copper transport protein ctr4 OS=Schizosacc... 34 1.0
sp|Q6ME04|UPPP_PARUW Undecaprenyl-diphosphatase OS=Protochlamydi... 33 2.3
sp|Q7YXD4|P80_DICDI Protein P80 OS=Dictyostelium discoideum GN=p... 32 3.9

>sp|Q39065|COPT1_ARATH Copper transporter 1 OS=Arabidopsis thaliana
GN=COPT1 PE=2 SV=2
Length = 170

Score = 52.4 bits (124), Expect = 3e-06
Identities = 23/37 (62%), Positives = 30/37 (81%)
Frame = +3

Query: 414 FSLRVGLAYLLMLAVMSFNGGVFLAVILGLSAGFFVF 524
++LR+GLAYL+MLAVMSFN GVFL + G + GF +F
Sbjct: 110 YTLRIGLAYLVMLAVMSFNAGVFLVALAGHAVGFMLF 146


>sp|O15432|COPT2_HUMAN Probable low affinity copper uptake protein 2
OS=Homo sapiens GN=SLC31A2 PE=2 SV=1
Length = 143

Score = 38.5 bits (88), Expect = 0.041
Identities = 15/34 (44%), Positives = 26/34 (76%)
Frame = +3

Query: 420 LRVGLAYLLMLAVMSFNGGVFLAVILGLSAGFFV 521
++V + Y +MLAVMS+N +FL V+LG + G+++
Sbjct: 102 IQVVIGYFIMLAVMSYNTWIFLGVVLGSAVGYYL 135


>sp|Q9CPU9|COPT2_MOUSE Probable low affinity copper uptake protein 2
OS=Mus musculus GN=Slc31a2 PE=2 SV=1
Length = 143

Score = 38.1 bits (87), Expect = 0.054
Identities = 15/34 (44%), Positives = 26/34 (76%)
Frame = +3

Query: 420 LRVGLAYLLMLAVMSFNGGVFLAVILGLSAGFFV 521
++V + Y +MLAVMS+N +FL V+LG + G+++
Sbjct: 102 IQVVIGYFVMLAVMSYNTWIFLGVVLGSAVGYYL 135


>sp|Q06686|CTR3_YEAST Copper transport protein CTR3 OS=Saccharomyces
cerevisiae GN=CTR3 PE=1 SV=1
Length = 241

Score = 35.4 bits (80), Expect = 0.35
Identities = 14/37 (37%), Positives = 25/37 (67%)
Frame = +3

Query: 414 FSLRVGLAYLLMLAVMSFNGGVFLAVILGLSAGFFVF 524
F L+ GL+Y++ML M +NG + ++ ++G G F+F
Sbjct: 174 FVLQWGLSYIIMLLFMYYNGYIIISCLIGAIVGRFIF 210


>sp|Q9P7F9|CTR5_SCHPO Copper transport protein ctr5
OS=Schizosaccharomyces pombe GN=ctr5 PE=1 SV=1
Length = 173

Score = 34.3 bits (77), Expect = 0.78
Identities = 17/35 (48%), Positives = 22/35 (62%)
Frame = +3

Query: 435 AYLLMLAVMSFNGGVFLAVILGLSAGFFVFRTDIH 539
A +LML VMSFNG L +G GFF+F +D +
Sbjct: 126 ATILMLIVMSFNGYAILFGFVGAWIGFFLFASDTY 160


>sp|P38865|CTR2_YEAST Copper transport protein CTR2 OS=Saccharomyces
cerevisiae GN=CTR2 PE=1 SV=1
Length = 189

Score = 34.3 bits (77), Expect = 0.78
Identities = 15/39 (38%), Positives = 26/39 (66%)
Frame = +3

Query: 414 FSLRVGLAYLLMLAVMSFNGGVFLAVILGLSAGFFVFRT 530
+ L+VG +++LML M++NG + LAV+ G G + + T
Sbjct: 137 YGLQVGFSFMLMLVFMTYNGWLMLAVVCGAIWGNYSWCT 175


>sp|Q9JK41|COPT1_RAT High affinity copper uptake protein 1 OS=Rattus
norvegicus GN=Slc31a1 PE=2 SV=1
Length = 187

Score = 34.3 bits (77), Expect = 0.78
Identities = 14/35 (40%), Positives = 24/35 (68%)
Frame = +3

Query: 420 LRVGLAYLLMLAVMSFNGGVFLAVILGLSAGFFVF 524
++V ++Y LML M++NG + +AV G G+F+F
Sbjct: 138 IQVVISYFLMLIFMTYNGYLCIAVAAGAGTGYFLF 172


>sp|Q5RAS6|COPT1_PONAB High affinity copper uptake protein 1
OS=Pongo abelii GN=SLC31A1 PE=2 SV=1
Length = 190

Score = 34.3 bits (77), Expect = 0.78
Identities = 14/35 (40%), Positives = 24/35 (68%)
Frame = +3

Query: 420 LRVGLAYLLMLAVMSFNGGVFLAVILGLSAGFFVF 524
++V ++Y LML M++NG + +AV G G+F+F
Sbjct: 141 IQVVISYFLMLIFMTYNGYLCIAVAAGAGTGYFLF 175


>sp|Q8WNR0|COPT1_PIG High affinity copper uptake protein 1 OS=Sus
scrofa GN=SLC31A1 PE=2 SV=1
Length = 189

Score = 34.3 bits (77), Expect = 0.78
Identities = 14/35 (40%), Positives = 24/35 (68%)
Frame = +3

Query: 420 LRVGLAYLLMLAVMSFNGGVFLAVILGLSAGFFVF 524
++V ++Y LML M++NG + +AV G G+F+F
Sbjct: 140 IQVVISYFLMLIFMTYNGYLCIAVAAGAGTGYFLF 174


>sp|Q8K211|COPT1_MOUSE High affinity copper uptake protein 1 OS=Mus
musculus GN=Slc31a1 PE=2 SV=1
Length = 196

Score = 34.3 bits (77), Expect = 0.78
Identities = 14/35 (40%), Positives = 24/35 (68%)
Frame = +3

Query: 420 LRVGLAYLLMLAVMSFNGGVFLAVILGLSAGFFVF 524
++V ++Y LML M++NG + +AV G G+F+F
Sbjct: 147 IQVVISYFLMLIFMTYNGYLCIAVAAGAGTGYFLF 181


tr_hit_id Q93VM8
Definition tr|Q93VM8|Q93VM8_ARATH AT5g20650/T1M15_50 (COPT5) OS=Arabidopsis thaliana
Align length 137
Score (bit) 62.8
E-value 2.0e-08
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK954619|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0020_O19, 5'
(767 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q93VM8|Q93VM8_ARATH AT5g20650/T1M15_50 (COPT5) OS=Arabidopsis... 63 2e-08
tr|Q69P80|Q69P80_ORYSJ Os09g0440700 protein OS=Oryza sativa subs... 62 6e-08
tr|A2Z1P3|A2Z1P3_ORYSI Putative uncharacterized protein OS=Oryza... 62 6e-08
tr|A9NY93|A9NY93_PICSI Putative uncharacterized protein OS=Picea... 58 6e-07
tr|A9PD84|A9PD84_POPTR Putative uncharacterized protein OS=Popul... 58 8e-07
tr|Q8SAA4|Q8SAA4_ARATH COPT5 (Fragment) OS=Arabidopsis thaliana ... 57 1e-06
tr|Q60EN8|Q60EN8_ORYSJ Os05g0424700 protein OS=Oryza sativa subs... 57 1e-06
tr|A2Y4V1|A2Y4V1_ORYSI Putative uncharacterized protein OS=Oryza... 57 1e-06
tr|A9S7E1|A9S7E1_PHYPA Ctr family transporter OS=Physcomitrella ... 57 2e-06
tr|A7P4V3|A7P4V3_VITVI Chromosome chr4 scaffold_6, whole genome ... 56 2e-06
tr|Q94EE4|Q94EE4_ORYSJ Putative copper transporter protein OS=Or... 55 4e-06
tr|Q0JIY5|Q0JIY5_ORYSJ Os01g0770700 protein OS=Oryza sativa subs... 55 4e-06
tr|B8AA54|B8AA54_ORYSI Putative uncharacterized protein OS=Oryza... 55 4e-06
tr|Q6Z0Q9|Q6Z0Q9_ORYSJ COPT5-like protein OS=Oryza sativa subsp.... 55 7e-06
tr|A2YVV8|A2YVV8_ORYSI Putative uncharacterized protein OS=Oryza... 55 7e-06
tr|Q8GWP3|Q8GWP3_ARATH Putative copper transport protein OS=Arab... 54 2e-05
tr|B6UHR5|B6UHR5_MAIZE Copper transporter 1 OS=Zea mays PE=2 SV=1 54 2e-05
tr|A9SWV9|A9SWV9_PHYPA Ctr family copper transporter OS=Physcomi... 54 2e-05
tr|A9PEN3|A9PEN3_POPTR Putative uncharacterized protein OS=Popul... 54 2e-05
tr|A7PNX0|A7PNX0_VITVI Chromosome chr8 scaffold_23, whole genome... 54 2e-05
tr|Q5ZD08|Q5ZD08_ORYSJ cDNA clone:002-156-C01, full insert seque... 52 3e-05
tr|Q547P9|Q547P9_ARATH Copper transporter COPT1 (Copper transpor... 52 3e-05
tr|Q0JIY4|Q0JIY4_ORYSJ Os01g0770800 protein (Fragment) OS=Oryza ... 52 3e-05
tr|A7NYP4|A7NYP4_VITVI Chromosome chr6 scaffold_3, whole genome ... 52 3e-05
tr|A2ZY89|A2ZY89_ORYSJ Putative uncharacterized protein OS=Oryza... 52 3e-05
tr|Q9STG2|Q9STG2_ARATH Copper transporter protein homolog (At3g4... 52 6e-05
tr|Q0ZB34|Q0ZB34_CHLRE CTR family transmembrane copper ion trans... 51 1e-04
tr|B6TTV1|B6TTV1_MAIZE Copper transporter 1 OS=Zea mays PE=2 SV=1 51 1e-04
tr|B6SJM6|B6SJM6_MAIZE Copper transporter 1 OS=Zea mays PE=2 SV=1 51 1e-04
tr|A9NYF4|A9NYF4_PICSI Putative uncharacterized protein OS=Picea... 51 1e-04

>tr|Q93VM8|Q93VM8_ARATH AT5g20650/T1M15_50 (COPT5) OS=Arabidopsis
thaliana GN=At5g20650 PE=2 SV=1
Length = 146

Score = 62.8 bits (151), Expect = 2e-08
Identities = 42/137 (30%), Positives = 60/137 (43%)
Frame = +3

Query: 123 HLTSFYWGHLATLQFDDWRTISQGTYVXXXXXXXXXXXXXXXXERXXXXXXXXXXXXXXX 302
H+T FYWG AT+ FD W+T S +Y+ E
Sbjct: 3 HMT-FYWGIKATILFDFWKTDSWLSYILTLIACFVFSAFYQYLENRRIQFKSLSSSRRAP 61

Query: 303 XXXXXXXXXHNNNNHSKPISPSPHQXXXXXXXXXXXXFSLRVGLAYLLMLAVMSFNGGVF 482
+++ S P+ P F + + YLLMLA MSFNGGVF
Sbjct: 62 PPP------RSSSGVSAPLIPKSGTRSAAKAASVLL-FGVNAAIGYLLMLAAMSFNGGVF 114

Query: 483 LAVILGLSAGFFVFRTD 533
+A+++GL+AG+ VFR+D
Sbjct: 115 IAIVVGLTAGYAVFRSD 131


>tr|Q69P80|Q69P80_ORYSJ Os09g0440700 protein OS=Oryza sativa subsp.
japonica GN=OJ1344_B01.31 PE=2 SV=1
Length = 149

Score = 61.6 bits (148), Expect = 6e-08
Identities = 42/136 (30%), Positives = 57/136 (41%)
Frame = +3

Query: 123 HLTSFYWGHLATLQFDDWRTISQGTYVXXXXXXXXXXXXXXXXERXXXXXXXXXXXXXXX 302
H+T FYWG T+ FD WRT + Y+ E
Sbjct: 3 HMT-FYWGKDVTILFDGWRTATWTGYLLSLVALLLASAFYQYLEAFRIRVKLLAGAKPAS 61

Query: 303 XXXXXXXXXHNNNNHSKPISPSPHQXXXXXXXXXXXXFSLRVGLAYLLMLAVMSFNGGVF 482
++ + + PS F + GL YLLMLAVMSFNGGVF
Sbjct: 62 IPPPAS----SDAARAPLLLPSSAAGRWPARLATAGLFGVNSGLGYLLMLAVMSFNGGVF 117

Query: 483 LAVILGLSAGFFVFRT 530
+AV++GL+AG+ FR+
Sbjct: 118 VAVVVGLAAGYLAFRS 133


>tr|A2Z1P3|A2Z1P3_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_31527 PE=4 SV=1
Length = 149

Score = 61.6 bits (148), Expect = 6e-08
Identities = 42/136 (30%), Positives = 57/136 (41%)
Frame = +3

Query: 123 HLTSFYWGHLATLQFDDWRTISQGTYVXXXXXXXXXXXXXXXXERXXXXXXXXXXXXXXX 302
H+T FYWG T+ FD WRT + Y+ E
Sbjct: 3 HMT-FYWGKDVTILFDGWRTATWTGYLLSLVALLLASAFYQYLEAFRIRVKLLAGAKPAS 61

Query: 303 XXXXXXXXXHNNNNHSKPISPSPHQXXXXXXXXXXXXFSLRVGLAYLLMLAVMSFNGGVF 482
++ + + PS F + GL YLLMLAVMSFNGGVF
Sbjct: 62 IPPPAS----SDAARAPLLLPSSAAGRWPARLATAGLFGVNSGLGYLLMLAVMSFNGGVF 117

Query: 483 LAVILGLSAGFFVFRT 530
+AV++GL+AG+ FR+
Sbjct: 118 VAVVVGLAAGYLAFRS 133


>tr|A9NY93|A9NY93_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 137

Score = 58.2 bits (139), Expect = 6e-07
Identities = 27/39 (69%), Positives = 30/39 (76%)
Frame = +3

Query: 414 FSLRVGLAYLLMLAVMSFNGGVFLAVILGLSAGFFVFRT 530
F L GL YLLMLA MSFNGGVF+AVILG G+F FR+
Sbjct: 85 FGLNAGLGYLLMLAAMSFNGGVFIAVILGFVVGYFFFRS 123


>tr|A9PD84|A9PD84_POPTR Putative uncharacterized protein OS=Populus
trichocarpa PE=2 SV=1
Length = 149

Score = 57.8 bits (138), Expect = 8e-07
Identities = 25/40 (62%), Positives = 33/40 (82%)
Frame = +3

Query: 414 FSLRVGLAYLLMLAVMSFNGGVFLAVILGLSAGFFVFRTD 533
F + G+ YLLML VMSFNGGVFLAV+LGL+ G+ +FR++
Sbjct: 96 FGINSGIGYLLMLVVMSFNGGVFLAVVLGLAIGYLLFRSE 135


>tr|Q8SAA4|Q8SAA4_ARATH COPT5 (Fragment) OS=Arabidopsis thaliana
GN=COPT5 PE=2 SV=1
Length = 132

Score = 57.4 bits (137), Expect = 1e-06
Identities = 24/40 (60%), Positives = 33/40 (82%)
Frame = +3

Query: 414 FSLRVGLAYLLMLAVMSFNGGVFLAVILGLSAGFFVFRTD 533
F + + YLLMLA MSFNGGVF+A+++GL+AG+ VFR+D
Sbjct: 78 FGVNAAIGYLLMLAAMSFNGGVFIAIVVGLTAGYAVFRSD 117


>tr|Q60EN8|Q60EN8_ORYSJ Os05g0424700 protein OS=Oryza sativa subsp.
japonica GN=OJ1212_B02.11 PE=2 SV=1
Length = 151

Score = 57.4 bits (137), Expect = 1e-06
Identities = 25/40 (62%), Positives = 34/40 (85%)
Frame = +3

Query: 417 SLRVGLAYLLMLAVMSFNGGVFLAVILGLSAGFFVFRTDI 536
++RVG+AYL+MLA+MSFNGGVFLA++ G +AGF FR +
Sbjct: 92 AVRVGVAYLIMLALMSFNGGVFLAIVAGHAAGFLAFRAGL 131


>tr|A2Y4V1|A2Y4V1_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_20027 PE=4 SV=1
Length = 151

Score = 57.4 bits (137), Expect = 1e-06
Identities = 25/40 (62%), Positives = 34/40 (85%)
Frame = +3

Query: 417 SLRVGLAYLLMLAVMSFNGGVFLAVILGLSAGFFVFRTDI 536
++RVG+AYL+MLA+MSFNGGVFLA++ G +AGF FR +
Sbjct: 92 AVRVGVAYLIMLALMSFNGGVFLAIVAGHAAGFLAFRAGL 131


>tr|A9S7E1|A9S7E1_PHYPA Ctr family transporter OS=Physcomitrella
patens subsp. patens GN=PHYPADRAFT_105902 PE=4 SV=1
Length = 147

Score = 56.6 bits (135), Expect = 2e-06
Identities = 28/47 (59%), Positives = 36/47 (76%), Gaps = 1/47 (2%)
Frame = +3

Query: 414 FSLRVGLAYLLMLAVMSFNGGVFLAVILGLSAGFFVFR-TDIHTPKC 551
F + VG+ YLLMLA MSFNGGVF+A++LGL+ G F+FR +DI C
Sbjct: 100 FGVIVGIRYLLMLASMSFNGGVFIAIVLGLTLGHFLFRSSDIAGSDC 146


>tr|A7P4V3|A7P4V3_VITVI Chromosome chr4 scaffold_6, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00032295001
PE=4 SV=1
Length = 137

Score = 56.2 bits (134), Expect = 2e-06
Identities = 42/138 (30%), Positives = 54/138 (39%), Gaps = 2/138 (1%)
Frame = +3

Query: 123 HLTSFYWGHLATLQFDDWRTISQGTYVXXXXXXXXXXXXXXXXERXXXXXXXXXXXXXXX 302
H+T FYW TL D W+T S +Y E
Sbjct: 3 HMT-FYWSTSVTLLIDSWKTESWASYGLTLLACLIASAFYQYLEDRRIRLKLIAASVG-- 59

Query: 303 XXXXXXXXXHNNNNHSKPISPSPHQXXXXXXXXXXXX--FSLRVGLAYLLMLAVMSFNGG 476
S P S SP + F + + YL+MLAVMSFNGG
Sbjct: 60 ---------------SSPASASPIEEPLLHATKFAGAALFGINSAIGYLIMLAVMSFNGG 104

Query: 477 VFLAVILGLSAGFFVFRT 530
VFLAV+LGL+ G+ +FR+
Sbjct: 105 VFLAVVLGLAIGYLLFRS 122