DK954627 |
Clone id |
TST39A01NGRL0020_P04 |
Library |
TST39 |
Length |
671 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0020_P04. 5' end sequence. |
Accession |
DK954627 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL1731Contig1 |
Sequence |
AGCTCGTTAGCTTCGAGTCGCCATAGCCCATTTCTTGTGTCGCCTCTTCTACCGTTACCC TCAGTTTTCTTTCCTCCTGTTCTAACTTCTGCTGCACCCGCCTCTCAAACTCCATAAGTC CTCCGAGCTCTGGACCGAACTGCATTGTTGTAGACCTCCATAGACAATGTAAGGAAGCTG TTCAATTCAGTCAGGACTTTGCAAGGGAAGCTCTCTCTGCTCGTTGATTAAGGGGGAACG TAGTGGCACAACTAGTCACAAGGGACCCTTTTCTAAAGCTGGCAATGGCAACAGCTGGTT GCCAGCTGCTGCTCCTCACCTTCATAGCAGCGGTTTCCATAGCCTCCTCTATTGCAGGCA ATTTGCTGCTCGTGAATGCGGACGAGGACCGTGGCTTAATTTGGAGTGCTAATCTTGCTG ATGCCATCCAGCCCATTACCTGGAATGTAACCTATGGAACGGCCTCTCCGCTTGGAAAGC CGAAGCGGGTCCTGCTAATAAATGGCCAATTCCCTGGCCCTCAAATCAATTCTGAAACCA ATATAAATCTAGAAATCAATGTATTCAATAGCATTGATGAGCCCCTATTGTTCACTTGGA ATGGGGTTTACCAAAGAAGATCATCTTGGCAAGATGGAGTTTTAGGGACAAATTGTCCGA TATTGCCTGGC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q00624 |
Definition |
sp|Q00624|ASOL_BRANA L-ascorbate oxidase homolog OS=Brassica napus |
Align length |
77 |
Score (bit) |
124.0 |
E-value |
4.0e-28 |
Report |
 |
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7P0D6 |
Definition |
tr|A7P0D6|A7P0D6_VITVI Chromosome chr6 scaffold_3, whole genome shotgun sequence OS=Vitis vinifera |
Align length |
78 |
Score (bit) |
129.0 |
E-value |
1.0e-28 |
Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK954627|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0020_P04, 5' (671 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A7P0D6|A7P0D6_VITVI Chromosome chr6 scaffold_3, whole genome ... 129 1e-28 tr|O23170|O23170_ARATH Pectinesterase like protein OS=Arabidopsi... 125 2e-27 tr|Q39323|Q39323_BRANA Bplo protein OS=Brassica napus GN=Bplo PE... 124 4e-27 tr|Q39322|Q39322_BRANA Bplo protein OS=Brassica napus GN=Bplo PE... 124 4e-27 tr|A8IXH9|A8IXH9_BRACM Sku5-like 11 OS=Brassica campestris PE=2 ... 124 5e-27 tr|Q7XIF0|Q7XIF0_ORYSJ Os07g0119400 protein OS=Oryza sativa subs... 124 7e-27 tr|O64838|O64838_ARATH Putative pectinesterase OS=Arabidopsis th... 124 7e-27 tr|A2YHM9|A2YHM9_ORYSI Putative uncharacterized protein OS=Oryza... 124 7e-27 tr|A2Q4H7|A2Q4H7_MEDTR Multicopper oxidase, type 1 OS=Medicago t... 124 7e-27 tr|Q8S3U8|Q8S3U8_PETHY 1-ascorbate oxidase OS=Petunia hybrida GN... 123 1e-26 tr|Q9LJF2|Q9LJF2_ARATH L-ascorbate oxidase; pectinesterase-like ... 122 2e-26 tr|Q9SMW3|Q9SMW3_ARATH BNH protein (At1g55560) (Putative unchara... 122 3e-26 tr|Q9LJF1|Q9LJF1_ARATH BNH protein; pectinesterase-like protein;... 122 3e-26 tr|B8LRP4|B8LRP4_PICSI Putative uncharacterized protein OS=Picea... 122 3e-26 tr|A5AHY6|A5AHY6_VITVI Putative uncharacterized protein OS=Vitis... 120 6e-26 tr|A9NWT1|A9NWT1_PICSI Putative uncharacterized protein OS=Picea... 120 8e-26 tr|Q9ZVV4|Q9ZVV4_ARATH T5A14.1 protein (At1g55570/T5A14_1) OS=Ar... 119 1e-25 tr|Q6UN73|Q6UN73_TOBAC Ntp805 OS=Nicotiana tabacum GN=pntp805 PE... 119 1e-25 tr|Q6UN74|Q6UN74_TOBAC Ntp302 (Ntp101) OS=Nicotiana tabacum GN=p... 119 2e-25 tr|A7PX40|A7PX40_VITVI Chromosome chr12 scaffold_36, whole genom... 119 2e-25 tr|Q39320|Q39320_BRANA Bplo protein OS=Brassica napus GN=Bplo PE... 118 3e-25 tr|Q40473|Q40473_TOBAC PS60 protein OS=Nicotiana tabacum GN=PS60... 118 4e-25 tr|A7R3R4|A7R3R4_VITVI Chromosome undetermined scaffold_560, who... 118 4e-25 tr|Q9FKY9|Q9FKY9_ARATH Pectinesterase like protein OS=Arabidopsi... 117 7e-25 tr|Q8LPS9|Q8LPS9_ARATH AT5g66920/MUD21_18 OS=Arabidopsis thalian... 117 7e-25 tr|Q8LFM3|Q8LFM3_ARATH Pectinesterase-like protein OS=Arabidopsi... 117 7e-25 tr|Q6UN75|Q6UN75_TOBAC Ntp201 OS=Nicotiana tabacum GN=pntp201 PE... 117 9e-25 tr|Q75J71|Q75J71_ORYSJ Os05g0485800 protein OS=Oryza sativa subs... 116 1e-24 tr|Q09J77|Q09J77_CAMSI Pollen-specific protein OS=Camellia sinen... 116 1e-24 tr|A3B597|A3B597_ORYSJ Putative uncharacterized protein OS=Oryza... 116 1e-24
>tr|A7P0D6|A7P0D6_VITVI Chromosome chr6 scaffold_3, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00024867001 PE=4 SV=1 Length = 550
Score = 129 bits (325), Expect = 1e-28 Identities = 55/78 (70%), Positives = 68/78 (87%) Frame = +3
Query: 438 TWNVTYGTASPLGKPKRVLLINGQFPGPQINSETNINLEINVFNSIDEPLLFTWNGVYQR 617 TWNVTYGT SPLG P++ +LING+FPGP+IN +N N+ INVFN++DEPLLFTWNG+ QR Sbjct: 31 TWNVTYGTISPLGVPQQGILINGEFPGPRINCSSNNNIVINVFNNLDEPLLFTWNGIQQR 90
Query: 618 RSSWQDGVLGTNCPILPG 671 ++SWQDG+ GTNCPI PG Sbjct: 91 KNSWQDGLPGTNCPIQPG 108
>tr|O23170|O23170_ARATH Pectinesterase like protein OS=Arabidopsis thaliana GN=C7A10.200 PE=2 SV=1 Length = 541
Score = 125 bits (314), Expect = 2e-27 Identities = 56/86 (65%), Positives = 65/86 (75%) Frame = +3
Query: 411 NLADAIQPITWNVTYGTASPLGKPKRVLLINGQFPGPQINSETNINLEINVFNSIDEPLL 590 N D TW VTYGT SPLG P++V+LINGQFPGP I + TN N+ +N+ N +DEP L Sbjct: 25 NAEDPYMFYTWTVTYGTRSPLGVPQQVILINGQFPGPAIEAVTNNNIVVNLINKLDEPFL 84
Query: 591 FTWNGVYQRRSSWQDGVLGTNCPILP 668 TWNGV QRR+SWQDGVLGTNCPI P Sbjct: 85 ITWNGVKQRRTSWQDGVLGTNCPIQP 110
>tr|Q39323|Q39323_BRANA Bplo protein OS=Brassica napus GN=Bplo PE=2 SV=1 Length = 555
Score = 124 bits (312), Expect = 4e-27 Identities = 53/77 (68%), Positives = 64/77 (83%) Frame = +3
Query: 441 WNVTYGTASPLGKPKRVLLINGQFPGPQINSETNINLEINVFNSIDEPLLFTWNGVYQRR 620 WNVTYGTASPLG P++V+LINGQFPGP INS +N N+ INVFN++DEP L TWNG+ R+ Sbjct: 32 WNVTYGTASPLGVPQQVILINGQFPGPNINSTSNNNVIINVFNNLDEPFLLTWNGIQHRK 91
Query: 621 SSWQDGVLGTNCPILPG 671 + WQDG GT CPI+PG Sbjct: 92 NCWQDGTQGTMCPIMPG 108
>tr|Q39322|Q39322_BRANA Bplo protein OS=Brassica napus GN=Bplo PE=2 SV=1 Length = 555
Score = 124 bits (312), Expect = 4e-27 Identities = 53/77 (68%), Positives = 64/77 (83%) Frame = +3
Query: 441 WNVTYGTASPLGKPKRVLLINGQFPGPQINSETNINLEINVFNSIDEPLLFTWNGVYQRR 620 WNVTYGTASPLG P++V+LINGQFPGP INS +N N+ INVFN++DEP L TWNG+ R+ Sbjct: 32 WNVTYGTASPLGVPQQVILINGQFPGPNINSTSNNNVIINVFNNLDEPFLLTWNGIQHRK 91
Query: 621 SSWQDGVLGTNCPILPG 671 + WQDG GT CPI+PG Sbjct: 92 NCWQDGTQGTMCPIMPG 108
>tr|A8IXH9|A8IXH9_BRACM Sku5-like 11 OS=Brassica campestris PE=2 SV=1 Length = 553
Score = 124 bits (311), Expect = 5e-27 Identities = 53/77 (68%), Positives = 64/77 (83%) Frame = +3
Query: 441 WNVTYGTASPLGKPKRVLLINGQFPGPQINSETNINLEINVFNSIDEPLLFTWNGVYQRR 620 WNVTYGTASPLG P++V+LINGQFPGP INS +N N+ INVFN++DEP L TWNG+ R+ Sbjct: 32 WNVTYGTASPLGVPQQVILINGQFPGPNINSTSNNNVIINVFNNLDEPFLLTWNGIQHRK 91
Query: 621 SSWQDGVLGTNCPILPG 671 + WQDG GT CPI+PG Sbjct: 92 NCWQDGTPGTMCPIMPG 108
>tr|Q7XIF0|Q7XIF0_ORYSJ Os07g0119400 protein OS=Oryza sativa subsp. japonica GN=P0022B05.111 PE=4 SV=1 Length = 545
Score = 124 bits (310), Expect = 7e-27 Identities = 58/93 (62%), Positives = 73/93 (78%), Gaps = 4/93 (4%) Frame = +3
Query: 405 SANLADAIQP---ITWNVTYGTASPLGK-PKRVLLINGQFPGPQINSETNINLEINVFNS 572 +A LA A P TWNVTYG+ +PLG P++ +LINGQFPGP+I+ TN N+ +NVFN+ Sbjct: 19 AATLAGADDPYRFFTWNVTYGSINPLGSTPQQGILINGQFPGPRIDCVTNDNIIVNVFNN 78
Query: 573 IDEPLLFTWNGVYQRRSSWQDGVLGTNCPILPG 671 +DEP L TWNG+ QR++SWQDGVLGTNCPI PG Sbjct: 79 LDEPFLLTWNGIKQRKNSWQDGVLGTNCPIPPG 111
>tr|O64838|O64838_ARATH Putative pectinesterase OS=Arabidopsis thaliana GN=At2g23630 PE=2 SV=1 Length = 541
Score = 124 bits (310), Expect = 7e-27 Identities = 55/90 (61%), Positives = 65/90 (72%) Frame = +3
Query: 399 IWSANLADAIQPITWNVTYGTASPLGKPKRVLLINGQFPGPQINSETNINLEINVFNSID 578 ++ N D TW VTYGT SPLG P++V+LINGQFPGP I TN N+ +NV N +D Sbjct: 20 VFVINAEDPYLFFTWTVTYGTRSPLGVPQQVILINGQFPGPPIEGVTNNNIVVNVINKLD 79
Query: 579 EPLLFTWNGVYQRRSSWQDGVLGTNCPILP 668 EP L TWNG+ QR+ SWQDGVLGTNCPI P Sbjct: 80 EPFLITWNGIKQRKMSWQDGVLGTNCPIQP 109
>tr|A2YHM9|A2YHM9_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_24700 PE=4 SV=1 Length = 545
Score = 124 bits (310), Expect = 7e-27 Identities = 58/93 (62%), Positives = 73/93 (78%), Gaps = 4/93 (4%) Frame = +3
Query: 405 SANLADAIQP---ITWNVTYGTASPLGK-PKRVLLINGQFPGPQINSETNINLEINVFNS 572 +A LA A P TWNVTYG+ +PLG P++ +LINGQFPGP+I+ TN N+ +NVFN+ Sbjct: 19 AATLAGADDPYRFFTWNVTYGSINPLGSTPQQGILINGQFPGPRIDCVTNDNIIVNVFNN 78
Query: 573 IDEPLLFTWNGVYQRRSSWQDGVLGTNCPILPG 671 +DEP L TWNG+ QR++SWQDGVLGTNCPI PG Sbjct: 79 LDEPFLLTWNGIKQRKNSWQDGVLGTNCPIPPG 111
>tr|A2Q4H7|A2Q4H7_MEDTR Multicopper oxidase, type 1 OS=Medicago truncatula GN=MtrDRAFT_AC157488g9v2 PE=4 SV=1 Length = 539
Score = 124 bits (310), Expect = 7e-27 Identities = 57/92 (61%), Positives = 70/92 (76%) Frame = +3
Query: 396 LIWSANLADAIQPITWNVTYGTASPLGKPKRVLLINGQFPGPQINSETNINLEINVFNSI 575 ++ S+N D + TWNVTYG PLG ++ +LINGQFPGPQI S TN NL ++VFNS+ Sbjct: 19 VVTSSNGEDPYRFYTWNVTYGDIYPLGVKQQGILINGQFPGPQIESVTNDNLIVSVFNSL 78
Query: 576 DEPLLFTWNGVYQRRSSWQDGVLGTNCPILPG 671 D+P L +WNGV QRR+SWQDGV GTNCPI PG Sbjct: 79 DQPFLISWNGVQQRRNSWQDGVYGTNCPIPPG 110
>tr|Q8S3U8|Q8S3U8_PETHY 1-ascorbate oxidase OS=Petunia hybrida GN=p303 PE=4 SV=1 Length = 559
Score = 123 bits (308), Expect = 1e-26 Identities = 53/84 (63%), Positives = 64/84 (76%) Frame = +3
Query: 420 DAIQPITWNVTYGTASPLGKPKRVLLINGQFPGPQINSETNINLEINVFNSIDEPLLFTW 599 D P WNVTYGT SPLG P++ +LINGQ PGP IN +N N+ +NVFN +DEPLL TW Sbjct: 26 DPYLPFDWNVTYGTISPLGVPQQGILINGQLPGPTINCTSNNNIVVNVFNHLDEPLLITW 85
Query: 600 NGVYQRRSSWQDGVLGTNCPILPG 671 NG+ QR++SWQDG GT CPI+PG Sbjct: 86 NGIQQRKNSWQDGTPGTMCPIMPG 109
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