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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK954647
Clone id TST39A01NGRL0020_P24
Library
Length 634
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0020_P24. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
CTCCGACAATGCCTATTGCAGGGTCTTCATGCTGCATTTCCCACAGGATCCATTGAAGTT
TCTTCTCCTCAACCAAGCATCGAAGGCCATGGCCGTTACCAGAGGTCTTGCATCTTCCCC
TACATCCTTCCGGAAACGGTCTTTCCTCCTCGCCTTCTTCTTCCTCCTGGCCACCACTCT
CCTCATCTTCACGTTTTCTGCGTTCTCCCTCCACAATGGCTCCGGGTTAAGCGTGGGATC
TGAAAGAGAGACACTGAATTTCACTGGTCAAAGAGGACTTGTCATGCGCAGGTTAAGTGC
TCTGAGGTCGGATCCACTTAAATTGAAGGTAGATACACTTTTCAAACAAGCCAACGATCA
GATCTCTTTGGTCAATTCGTATGCTTCCTATGCTCGTAAGAGCAAGCTTGAAATGATGAA
GGAGGTGAGGCTTTTCACAGAACAGGCTCAAGGTTTCATGGAGCTCTTAAATCGTCCTCA
GAACAAAGCCCTACTTACTGCCACCACAATCAATGTAGGTCACCTCGTGGCTTTTGATAC
AGAGCTTATAGAACTGGTCAAGAGTTCAAAACAGCACATGATGGATGCTAGGGAATACTT
TGACAGTCAACTCAGGGTTCAAAAACTAAAGGAT
■■Homology search results ■■ -
sp_hit_id Q9LSG3
Definition sp|Q9LSG3|QUA1_ARATH Glycosyltransferase QUASIMODO1 OS=Arabidopsis thaliana
Align length 118
Score (bit) 90.5
E-value 7.0e-18
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK954647|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0020_P24, 5'
         (634 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9LSG3|QUA1_ARATH Glycosyltransferase QUASIMODO1 OS=Arabidops...    91   7e-18
sp|Q9FWA4|GLTR_ARATH Uncharacterized glycosyltransferase At3g023...    88   3e-17
sp|P23529|APOE_CAVPO Apolipoprotein E OS=Cavia porcellus GN=APOE...    32   2.1  
sp|P47037|SMC3_YEAST Structural maintenance of chromosomes prote...    30   8.0  
sp|B4J9U3|EI3F2_DROGR Eukaryotic translation initiation factor 3...    30   8.0  

>sp|Q9LSG3|QUA1_ARATH Glycosyltransferase QUASIMODO1 OS=Arabidopsis
           thaliana GN=QUA1 PE=1 SV=1
          Length = 559

 Score = 90.5 bits (223), Expect = 7e-18
 Identities = 49/118 (41%), Positives = 79/118 (66%), Gaps = 2/118 (1%)
 Frame = +2

Query: 287 RRLSALRSDPLKLKVDTLFKQANDQISLVNSYASYARKSKLEMMKEVRLFTEQAQGFMEL 466
           R +  ++SDPLK ++  + KQA+D  SL  +YASYARK KLE  K VR+F + ++ + +L
Sbjct: 66  RSMLDIKSDPLKPRLIQIRKQADDHRSLALAYASYARKLKLENSKLVRIFADLSRNYTDL 125

Query: 467 LNRPQNKALLTA--TTINVGHLVAFDTELIELVKSSKQHMMDAREYFDSQLRVQKLKD 634
           +N+P  +AL  +   +I    L  F+ E+ E +K ++Q + +A+E FD+QL++QKLKD
Sbjct: 126 INKPTYRALYDSDGASIEESVLRQFEKEVKERIKMTRQVIAEAKESFDNQLKIQKLKD 183


>sp|Q9FWA4|GLTR_ARATH Uncharacterized glycosyltransferase At3g02350
           OS=Arabidopsis thaliana GN=At3g02350 PE=2 SV=1
          Length = 561

 Score = 88.2 bits (217), Expect = 3e-17
 Identities = 44/120 (36%), Positives = 80/120 (66%), Gaps = 2/120 (1%)
 Frame = +2

Query: 281 VMRRLSALRSDPLKLKVDTLFKQANDQISLVNSYASYARKSKLEMMKEVRLFTEQAQGFM 460
           + R   AL+SDPLK ++D + KQA D ++LVN+YA+YARK KL+  K+++LF + A  F 
Sbjct: 67  MQRTFLALQSDPLKTRLDLIHKQAIDHLTLVNAYAAYARKLKLDASKQLKLFEDLAINFS 126

Query: 461 ELLNRPQNKALLT--ATTINVGHLVAFDTELIELVKSSKQHMMDAREYFDSQLRVQKLKD 634
           +L ++P  K+ ++     +        + E+ + VK+++  +++++E +D+QL++QKLKD
Sbjct: 127 DLQSKPGLKSAVSDNGNALEEDSFRQLEKEVKDKVKTARMMIVESKESYDTQLKIQKLKD 186


>sp|P23529|APOE_CAVPO Apolipoprotein E OS=Cavia porcellus GN=APOE
           PE=2 SV=1
          Length = 298

 Score = 32.3 bits (72), Expect = 2.1
 Identities = 27/85 (31%), Positives = 40/85 (47%), Gaps = 1/85 (1%)
 Frame = +2

Query: 218 GSGLSVGSERETLNFTGQRGLVMRRLSALRSDPLKLKVDTLFKQANDQISLVNSYASYAR 397
           G+   V + RE L    ++G    RL AL S PL+ +     +Q   ++  V S A    
Sbjct: 181 GAERGVSAIRERLGSLIEQG----RLQALASQPLQERAQAWGEQMRGRLEKVGSQARDRL 236

Query: 398 KSKLEMMKEVRL-FTEQAQGFMELL 469
           +   E M+EVR+   EQA+ F   L
Sbjct: 237 EEVREQMEEVRVKVEEQAEAFQARL 261


>sp|P47037|SMC3_YEAST Structural maintenance of chromosomes protein
           3 OS=Saccharomyces cerevisiae GN=SMC3 PE=1 SV=1
          Length = 1230

 Score = 30.4 bits (67), Expect = 8.0
 Identities = 23/121 (19%), Positives = 50/121 (41%), Gaps = 3/121 (2%)
 Frame = +2

Query: 269 QRGLVMRRLSALR---SDPLKLKVDTLFKQANDQISLVNSYASYARKSKLEMMKEVRLFT 439
           QR L++++    R    D     + +  ++    I  +N   S  +  +  + K+     
Sbjct: 380 QRDLILKKGEYARFKSKDERDTWIHSEIEELKSSIQNLNELESQLQMDRTSLRKQYSAID 439

Query: 440 EQAQGFMELLNRPQNKALLTATTINVGHLVAFDTELIELVKSSKQHMMDAREYFDSQLRV 619
           E+ +  ++ +N P  K          G L  FD+ELI L +   + +   +E +  + ++
Sbjct: 440 EEIEELIDSINGPDTK----------GQLEDFDSELIHLKQKLSESLDTRKELWRKEQKL 489

Query: 620 Q 622
           Q
Sbjct: 490 Q 490


>sp|B4J9U3|EI3F2_DROGR Eukaryotic translation initiation factor 3
           subunit F-2 OS=Drosophila grimshawi GN=eIF3-S5-2 PE=3
           SV=2
          Length = 290

 Score = 30.4 bits (67), Expect = 8.0
 Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
 Frame = +2

Query: 347 QANDQISLVNSYASYARKSKLEMMKEVRLFTEQAQGFMEL--LNRPQNK 487
           ++ND I + NSY    +  ++  M++V+L  + A    EL  +N PQ K
Sbjct: 46  RSNDTIEITNSYMVIHKTQQIGEMEQVKLDKQYASEMYELNQINNPQEK 94
tr_hit_id A9P857
Definition tr|A9P857|A9P857_POPTR Putative uncharacterized protein OS=Populus trichocarpa
Align length 118
Score (bit) 99.0
E-value 2.0e-19
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK954647|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0020_P24, 5'
         (634 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9P857|A9P857_POPTR Putative uncharacterized protein OS=Popul...    99   2e-19
tr|Q1KUX6|Q1KUX6_9ROSI Putative uncharacterized protein OS=Cleom...    92   3e-17
tr|Q1KUT2|Q1KUT2_9ROSI Putative uncharacterized protein OS=Cleom...    91   4e-17
tr|A7PAH6|A7PAH6_VITVI Chromosome chr14 scaffold_9, whole genome...    87   8e-16
tr|A5ASM6|A5ASM6_VITVI Putative uncharacterized protein OS=Vitis...    87   8e-16
tr|B8AIA4|B8AIA4_ORYSI Putative uncharacterized protein OS=Oryza...    43   0.014
tr|Q6K3N8|Q6K3N8_ORYSJ Putative glycosyl transferase OS=Oryza sa...    42   0.031
tr|Q0E125|Q0E125_ORYSJ Os02g0498700 protein (Fragment) OS=Oryza ...    42   0.031
tr|A3A746|A3A746_ORYSJ Putative uncharacterized protein OS=Oryza...    42   0.031
tr|A5AFU3|A5AFU3_VITVI Putative uncharacterized protein OS=Vitis...    40   0.090
tr|B1WZY3|B1WZY3_CYAA5 Tryptophanyl-tRNA synthetase OS=Cyanothec...    38   0.59 
tr|A3IQG5|A3IQG5_9CHRO Tryptophanyl-tRNA synthetase OS=Cyanothec...    38   0.59 
tr|A4AP16|A4AP16_9FLAO ATP synthase gamma chain OS=Flavobacteria...    35   5.0  
tr|Q67WK4|Q67WK4_ORYSJ Glycosyl transferase protein A-like OS=Or...    35   5.0  
tr|A3B9V9|A3B9V9_ORYSJ Putative uncharacterized protein OS=Oryza...    35   5.0  
tr|A2YAX4|A2YAX4_ORYSI Putative uncharacterized protein OS=Oryza...    35   5.0  
tr|B7JZ06|B7JZ06_SYNP8 Tryptophanyl-tRNA synthetase OS=Synechoco...    34   6.5  
tr|B4C4P4|B4C4P4_9CHRO Tryptophanyl-tRNA synthetase OS=Cyanothec...    34   6.5  
tr|B3LWF6|B3LWF6_DROAN GF16341 OS=Drosophila ananassae GN=GF1634...    34   6.5  

>tr|A9P857|A9P857_POPTR Putative uncharacterized protein OS=Populus
           trichocarpa PE=2 SV=1
          Length = 554

 Score = 99.0 bits (245), Expect = 2e-19
 Identities = 50/118 (42%), Positives = 84/118 (71%), Gaps = 2/118 (1%)
 Frame = +2

Query: 287 RRLSALRSDPLKLKVDTLFKQANDQISLVNSYASYARKSKLEMMKEVRLFTEQAQGFMEL 466
           R + A++SDPLK ++D + KQA+D  SL ++YASYARK KLE  K VR+F + ++ + +L
Sbjct: 61  RSVLAMKSDPLKSRLDQIRKQADDHRSLAHAYASYARKLKLENSKLVRVFADLSRNYTDL 120

Query: 467 LNRPQNKALLTATTINVGH--LVAFDTELIELVKSSKQHMMDAREYFDSQLRVQKLKD 634
           +N+P  +AL  + ++++    L  F+ E+ E +K ++Q + +A+E FD+QL++QKLKD
Sbjct: 121 INKPSYRALSESDSLSIDEATLRLFEKEVKERIKVTRQVIAEAKESFDNQLKIQKLKD 178


>tr|Q1KUX6|Q1KUX6_9ROSI Putative uncharacterized protein OS=Cleome
           spinosa PE=4 SV=1
          Length = 556

 Score = 91.7 bits (226), Expect = 3e-17
 Identities = 50/130 (38%), Positives = 85/130 (65%), Gaps = 2/130 (1%)
 Frame = +2

Query: 251 TLNFTGQRGLVMRRLSALRSDPLKLKVDTLFKQANDQISLVNSYASYARKSKLEMMKEVR 430
           TL  TG    + R   AL+SDPLK +VD + KQA D ++LVN+YA+YARK K++  K+++
Sbjct: 53  TLPNTGS-AYMHRTFLALQSDPLKTRVDLIHKQATDHLTLVNAYAAYARKLKVDASKQLK 111

Query: 431 LFTEQAQGFMELLNRPQNKALLT--ATTINVGHLVAFDTELIELVKSSKQHMMDAREYFD 604
           LF + A  F +L ++P  K++L+     +    L   + E+ + VK+++  + +++E +D
Sbjct: 112 LFEDLAINFSDLQSKPGLKSVLSENGNAVEEDTLRQVEKEVKDKVKTARMMIAESKESYD 171

Query: 605 SQLRVQKLKD 634
           +QL++QKLKD
Sbjct: 172 TQLKIQKLKD 181


>tr|Q1KUT2|Q1KUT2_9ROSI Putative uncharacterized protein OS=Cleome
           spinosa PE=4 SV=1
          Length = 528

 Score = 91.3 bits (225), Expect = 4e-17
 Identities = 45/118 (38%), Positives = 79/118 (66%), Gaps = 2/118 (1%)
 Frame = +2

Query: 287 RRLSALRSDPLKLKVDTLFKQANDQISLVNSYASYARKSKLEMMKEVRLFTEQAQGFMEL 466
           R   AL+SDPLK ++D ++KQA D ++LVN+YA+YARK KL+  K+++LF +    F +L
Sbjct: 71  RTFLALQSDPLKTRLDLIYKQATDHLTLVNAYAAYARKLKLDASKQLKLFEDLGINFSDL 130

Query: 467 LNRPQNKALLT--ATTINVGHLVAFDTELIELVKSSKQHMMDAREYFDSQLRVQKLKD 634
             +P  K++L+     +    L   + E+ + VK+ +  +++++E +D+QL++QKLKD
Sbjct: 131 QYKPDYKSVLSENGNAVEEDTLRQLEKEVKDKVKTVRMMIVESKESYDTQLKIQKLKD 188


>tr|A7PAH6|A7PAH6_VITVI Chromosome chr14 scaffold_9, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00038116001
           PE=4 SV=1
          Length = 543

 Score = 87.0 bits (214), Expect = 8e-16
 Identities = 44/121 (36%), Positives = 78/121 (64%), Gaps = 3/121 (2%)
 Frame = +2

Query: 281 VMRRLSALRSDPLKLKVDTLFKQANDQISLVNSYASYARKSKLEMMKEVRLFTEQAQGFM 460
           + R   AL+SDPL+ ++D + KQAND I+LVN+YA+YARK KL++ +++R+F + A+ F 
Sbjct: 64  MQRTFLALKSDPLRTRLDLIHKQANDHITLVNAYAAYARKLKLDISRQLRMFDDLARNFS 123

Query: 461 ELLNRPQNKALLTATTINVGH---LVAFDTELIELVKSSKQHMMDAREYFDSQLRVQKLK 631
           +L  RP  +          G    +   + E+ + VK ++  + +++E +D+Q+++QKLK
Sbjct: 124 DLAARPGPRTAPEDEVEGTGDEDLVRQLEKEVKDRVKIARLMIAESKESYDNQIKIQKLK 183

Query: 632 D 634
           D
Sbjct: 184 D 184


>tr|A5ASM6|A5ASM6_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_022574 PE=4 SV=1
          Length = 543

 Score = 87.0 bits (214), Expect = 8e-16
 Identities = 44/121 (36%), Positives = 78/121 (64%), Gaps = 3/121 (2%)
 Frame = +2

Query: 281 VMRRLSALRSDPLKLKVDTLFKQANDQISLVNSYASYARKSKLEMMKEVRLFTEQAQGFM 460
           + R   AL+SDPL+ ++D + KQAND I+LVN+YA+YARK KL++ +++R+F + A+ F 
Sbjct: 64  MQRTFLALKSDPLRTRLDLIHKQANDHITLVNAYAAYARKLKLDISRQLRMFDDLARNFS 123

Query: 461 ELLNRPQNKALLTATTINVGH---LVAFDTELIELVKSSKQHMMDAREYFDSQLRVQKLK 631
           +L  RP  +          G    +   + E+ + VK ++  + +++E +D+Q+++QKLK
Sbjct: 124 DLAARPGPRTAPEDEVEGTGDEDLVRQLEKEVKDRVKIARLMIAESKESYDNQIKIQKLK 183

Query: 632 D 634
           D
Sbjct: 184 D 184


>tr|B8AIA4|B8AIA4_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_07307 PE=4 SV=1
          Length = 533

 Score = 43.1 bits (100), Expect = 0.014
 Identities = 27/113 (23%), Positives = 57/113 (50%), Gaps = 8/113 (7%)
 Frame = +2

Query: 320 KLKVDTLFKQANDQISLVNSYASYARKSKLEMMKEVRLFTEQAQGFMELLN--RPQNKAL 493
           +L+ + + KQA D  +   + A+ +R+  L+  + +RL +   +     L        A 
Sbjct: 45  RLRAEQIRKQAKDAAASAAALAAASRRLHLDRARHLRLLSSLHRNLTATLRDLSAAASAS 104

Query: 494 LTATTINVGHLVA------FDTELIELVKSSKQHMMDAREYFDSQLRVQKLKD 634
            +A+    G+  A       D +  +L+++++  + DA++ FD QL++Q+LKD
Sbjct: 105 ASASASEAGYASAGDEVRRLDLQAKDLIRAARAAIADAKQLFDPQLKIQRLKD 157


>tr|Q6K3N8|Q6K3N8_ORYSJ Putative glycosyl transferase OS=Oryza
           sativa subsp. japonica GN=OSJNBb0021C10.5 PE=4 SV=1
          Length = 533

 Score = 42.0 bits (97), Expect = 0.031
 Identities = 27/113 (23%), Positives = 56/113 (49%), Gaps = 8/113 (7%)
 Frame = +2

Query: 320 KLKVDTLFKQANDQISLVNSYASYARKSKLEMMKEVRLFTEQAQGFMELLN--RPQNKAL 493
           +L+ + + KQA D  +   + A+ +R+  L+  + +RL +   +     L        A 
Sbjct: 45  RLRAEQIRKQAKDAAASAAALAAASRRLHLDRARHLRLLSSLHRNLTATLRDLSAAASAS 104

Query: 494 LTATTINVGHLVA------FDTELIELVKSSKQHMMDAREYFDSQLRVQKLKD 634
            +A+    G+  A       D +  +L+++++  + DA+  FD QL++Q+LKD
Sbjct: 105 ASASASEAGYASAGDEVRRLDLQAKDLIRAARAAIADAKPLFDPQLKIQRLKD 157


>tr|Q0E125|Q0E125_ORYSJ Os02g0498700 protein (Fragment) OS=Oryza
           sativa subsp. japonica GN=Os02g0498700 PE=4 SV=1
          Length = 563

 Score = 42.0 bits (97), Expect = 0.031
 Identities = 27/113 (23%), Positives = 56/113 (49%), Gaps = 8/113 (7%)
 Frame = +2

Query: 320 KLKVDTLFKQANDQISLVNSYASYARKSKLEMMKEVRLFTEQAQGFMELLN--RPQNKAL 493
           +L+ + + KQA D  +   + A+ +R+  L+  + +RL +   +     L        A 
Sbjct: 75  RLRAEQIRKQAKDAAASAAALAAASRRLHLDRARHLRLLSSLHRNLTATLRDLSAAASAS 134

Query: 494 LTATTINVGHLVA------FDTELIELVKSSKQHMMDAREYFDSQLRVQKLKD 634
            +A+    G+  A       D +  +L+++++  + DA+  FD QL++Q+LKD
Sbjct: 135 ASASASEAGYASAGDEVRRLDLQAKDLIRAARAAIADAKPLFDPQLKIQRLKD 187


>tr|A3A746|A3A746_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_006618 PE=4 SV=1
          Length = 558

 Score = 42.0 bits (97), Expect = 0.031
 Identities = 27/113 (23%), Positives = 56/113 (49%), Gaps = 8/113 (7%)
 Frame = +2

Query: 320 KLKVDTLFKQANDQISLVNSYASYARKSKLEMMKEVRLFTEQAQGFMELLN--RPQNKAL 493
           +L+ + + KQA D  +   + A+ +R+  L+  + +RL +   +     L        A 
Sbjct: 45  RLRAEQIRKQAKDAAASAAALAAASRRLHLDRARHLRLLSSLHRNLTATLRDLSAAASAS 104

Query: 494 LTATTINVGHLVA------FDTELIELVKSSKQHMMDAREYFDSQLRVQKLKD 634
            +A+    G+  A       D +  +L+++++  + DA+  FD QL++Q+LKD
Sbjct: 105 ASASASEAGYASAGDEVRRLDLQAKDLIRAARAAIADAKPLFDPQLKIQRLKD 157


>tr|A5AFU3|A5AFU3_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_015808 PE=4 SV=1
          Length = 65

 Score = 40.4 bits (93), Expect = 0.090
 Identities = 21/33 (63%), Positives = 24/33 (72%)
 Frame = +2

Query: 344 KQANDQISLVNSYASYARKSKLEMMKEVRLFTE 442
           KQA D  SL  +YASYARK KLE  K VR+FT+
Sbjct: 29  KQAEDHKSLALAYASYARKLKLENSKLVRVFTD 61