DK954676 |
Clone id |
TST39A01NGRL0021_B05 |
Library |
TST39 |
Length |
658 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0021_B05. 5' end sequence. |
Accession |
DK954676 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL310Contig1 |
Sequence |
AGCGTGCTGAACTCGATCGTGGGAGCAGCAGCCATGGCGACCGCAAAGACGGTGAAGGAT GTGTCCCCTCATGAGTTTGTGCGTGCATACGCGGCCCACTTGAAGCGCTCTGGCAAGATT GAGGTGCCTTCATGGGCTGACATTGTGAAGACTGCGACTTTTAAGGAGCTTGCCCCCTAT GACCCAGATTGGTACTATATCAGAGCAGCTTCAATGGCTAGGAAGATCTATCTTCGTGGA GGAGTTGGTGTGGGTGCTTTCCGGAAAATATACGGAGGAAGGAAAAGTAATGGCAGTCGC CCTTCACATTTTGGAAAAAGCAGTGGCTCCATTGCTCGTGATGTTCTAAAGCAACTTGAG AAAATCGACATTGTTGAGAAAGATCCTAAAGGAGGCAGAAAGATAACTTCAAATGGACAA CGGGATCTAGATCAAGTAGCAGGACGGATTGCTGTCCCGGCAGCTTAGTGTATTTTGACT TGTAGCCTAGAGTTTTTCCAAGCTGGAGAGATTTTAGTTGAGACACAGATGAGGCATTTT TCTTTTGCCTTAGCCTTGATCTAAAAATTTTACTCCGTGTTAGACTCTTGTGAAGGTATA AGGGGTCAGATTGTTTCTATCTGCTTTTTCGGTCAAAAAAAAAAAAAAAAAAAAAAAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9SGA6 |
Definition |
sp|Q9SGA6|RS191_ARATH 40S ribosomal protein S19-1 OS=Arabidopsis thaliana |
Align length |
141 |
Score (bit) |
236.0 |
E-value |
7.0e-62 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9S7Q3 |
Definition |
tr|A9S7Q3|A9S7Q3_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
144 |
Score (bit) |
254.0 |
E-value |
2.0e-66 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK954676|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0021_B05, 5' (634 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9S7Q3|A9S7Q3_PHYPA Predicted protein OS=Physcomitrella paten... 254 2e-66 tr|A9RXE2|A9RXE2_PHYPA Predicted protein OS=Physcomitrella paten... 250 4e-65 tr|A9RQ90|A9RQ90_PHYPA Predicted protein OS=Physcomitrella paten... 248 2e-64 tr|A9SNK0|A9SNK0_PHYPA Predicted protein OS=Physcomitrella paten... 245 1e-63 tr|A9SJ99|A9SJ99_PHYPA Predicted protein OS=Physcomitrella paten... 245 2e-63 tr|A5C4J2|A5C4J2_VITVI Putative uncharacterized protein (Chromos... 244 2e-63 tr|A9NKW9|A9NKW9_PICSI Putative uncharacterized protein OS=Picea... 243 5e-63 tr|A9NL45|A9NL45_PICSI Putative uncharacterized protein OS=Picea... 241 3e-62 tr|A9PGL4|A9PGL4_POPTR Putative uncharacterized protein OS=Popul... 239 1e-61 tr|A5BGC5|A5BGC5_VITVI Putative uncharacterized protein (Chromos... 236 7e-61 tr|Q67ZX8|Q67ZX8_ARATH 40S ribosomal protein S19-like OS=Arabido... 234 3e-60 tr|Q0WSH0|Q0WSH0_ARATH 40S ribosomal protein S19-like OS=Arabido... 233 6e-60 tr|B4FP25|B4FP25_MAIZE 40S ribosomal protein S19 OS=Zea mays PE=... 229 8e-59 tr|Q2VCJ6|Q2VCJ6_SOLTU 40S ribosomal protein S19-like OS=Solanum... 228 2e-58 tr|B3TLL5|B3TLL5_ELAGV 40S ribosomal protein S19 OS=Elaeis guine... 228 3e-58 tr|B7FHE5|B7FHE5_MEDTR Putative uncharacterized protein OS=Medic... 226 7e-58 tr|B4FD90|B4FD90_MAIZE 40S ribosomal protein S19 OS=Zea mays PE=... 226 1e-57 tr|B6T3G4|B6T3G4_MAIZE 40S ribosomal protein S19 OS=Zea mays PE=... 224 3e-57 tr|Q10JD4|Q10JD4_ORYSJ Os03g0424500 protein OS=Oryza sativa subs... 224 3e-57 tr|A2XI59|A2XI59_ORYSI Putative uncharacterized protein OS=Oryza... 224 3e-57 tr|Q10JD1|Q10JD1_ORYSJ Retrotransposon protein, putative, Ty1-co... 223 1e-56 tr|A6MZL9|A6MZL9_ORYSI 40S ribosomal protein S19 OS=Oryza sativa... 222 2e-56 tr|Q5KQL4|Q5KQL4_ORYSJ Putative ribosomal protein S19 OS=Oryza s... 215 2e-54 tr|Q5KQL3|Q5KQL3_ORYSJ Putative ribosomal protein S19 OS=Oryza s... 213 1e-53 tr|Q5KQL5|Q5KQL5_ORYSJ Putative ribosomal protein S19 OS=Oryza s... 193 8e-48 tr|Q30GK2|Q30GK2_SOLPE 40S ribosomal protein S19 (Fragment) OS=S... 192 2e-47 tr|Q30GJ3|Q30GJ3_SOLCI 40S ribosomal protein S19 (Fragment) OS=S... 192 2e-47 tr|Q30GI3|Q30GI3_SOLHA 40S ribosomal protein S19 (Fragment) OS=S... 192 2e-47 tr|Q30GH5|Q30GH5_9SOLN 40S ribosomal protein S19 (Fragment) OS=S... 192 2e-47 tr|Q30GG5|Q30GG5_SOLPI 40S ribosomal protein S19 (Fragment) OS=S... 192 2e-47
>tr|A9S7Q3|A9S7Q3_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_163322 PE=4 SV=1 Length = 144
Score = 254 bits (650), Expect = 2e-66 Identities = 128/144 (88%), Positives = 132/144 (91%) Frame = +1
Query: 34 MATAKTVKDVSPHEFVRAYAAHLKRSGKIEVPSWADIVKTATFKELAPYDPDWYYIRAAS 213 MA AKTVKDVS HEFVR YAAHLKRSGKIEVP WAD+VKTATFKELAPYD DWYYIRAAS Sbjct: 1 MAQAKTVKDVSSHEFVRNYAAHLKRSGKIEVPVWADLVKTATFKELAPYDADWYYIRAAS 60
Query: 214 MARKIYLRGGVGVGAFRKIYGGRKSNGSRPSHFGKSSGSIARDVLKQLEKIDIVEKDPKG 393 MARKIYLR GVGVGAFRKIYGGRKSNG RPSHF KSSGSIAR LKQLE +DIVEKDP+G Sbjct: 61 MARKIYLRQGVGVGAFRKIYGGRKSNGVRPSHFAKSSGSIARHCLKQLEALDIVEKDPQG 120
Query: 394 GRKITSNGQRDLDQVAGRIAVPAA 465 GR+ITSNGQRDLDQVAGRIAV AA Sbjct: 121 GRRITSNGQRDLDQVAGRIAVAAA 144
>tr|A9RXE2|A9RXE2_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_206524 PE=4 SV=1 Length = 142
Score = 250 bits (639), Expect = 4e-65 Identities = 122/141 (86%), Positives = 132/141 (93%) Frame = +1
Query: 43 AKTVKDVSPHEFVRAYAAHLKRSGKIEVPSWADIVKTATFKELAPYDPDWYYIRAASMAR 222 AKTVKDV HEFVR YAAHLKRSGKIEVP+WAD+VKTATFKELAPYD DWYY+RAASMAR Sbjct: 2 AKTVKDVPSHEFVRNYAAHLKRSGKIEVPAWADLVKTATFKELAPYDADWYYVRAASMAR 61
Query: 223 KIYLRGGVGVGAFRKIYGGRKSNGSRPSHFGKSSGSIARDVLKQLEKIDIVEKDPKGGRK 402 KIYLRGG+GVGAF+KIYGGRKSNG RPSHF KSSGSIAR LKQLE+++IVEKDPKGGR+ Sbjct: 62 KIYLRGGIGVGAFKKIYGGRKSNGVRPSHFAKSSGSIARHCLKQLEQLNIVEKDPKGGRR 121
Query: 403 ITSNGQRDLDQVAGRIAVPAA 465 ITS+GQRDLDQVAGRIAV AA Sbjct: 122 ITSDGQRDLDQVAGRIAVTAA 142
>tr|A9RQ90|A9RQ90_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_204626 PE=4 SV=1 Length = 142
Score = 248 bits (634), Expect = 2e-64 Identities = 122/141 (86%), Positives = 131/141 (92%) Frame = +1
Query: 43 AKTVKDVSPHEFVRAYAAHLKRSGKIEVPSWADIVKTATFKELAPYDPDWYYIRAASMAR 222 AKTVKDV HEFVR YAAHLKRSGKIEVP+WAD+VKTATFKELAPY+ DWYYIRAASMAR Sbjct: 2 AKTVKDVPSHEFVRNYAAHLKRSGKIEVPTWADLVKTATFKELAPYESDWYYIRAASMAR 61
Query: 223 KIYLRGGVGVGAFRKIYGGRKSNGSRPSHFGKSSGSIARDVLKQLEKIDIVEKDPKGGRK 402 KIYLRGG+GVGAF+KIYGGRKSNG RPSHF KSSGSIAR LKQLE ++IVEKDPKGGR+ Sbjct: 62 KIYLRGGIGVGAFKKIYGGRKSNGVRPSHFAKSSGSIARHCLKQLEALNIVEKDPKGGRR 121
Query: 403 ITSNGQRDLDQVAGRIAVPAA 465 ITS+GQRDLDQVAGRIAV AA Sbjct: 122 ITSDGQRDLDQVAGRIAVAAA 142
>tr|A9SNK0|A9SNK0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_186874 PE=4 SV=1 Length = 142
Score = 245 bits (626), Expect = 1e-63 Identities = 120/141 (85%), Positives = 129/141 (91%) Frame = +1
Query: 43 AKTVKDVSPHEFVRAYAAHLKRSGKIEVPSWADIVKTATFKELAPYDPDWYYIRAASMAR 222 AKTVKDV HEFVR YAAHLKRSGKIEVP+WAD+VKTATFKELAPYD DW+YIR ASMAR Sbjct: 2 AKTVKDVPSHEFVRNYAAHLKRSGKIEVPAWADLVKTATFKELAPYDADWFYIRTASMAR 61
Query: 223 KIYLRGGVGVGAFRKIYGGRKSNGSRPSHFGKSSGSIARDVLKQLEKIDIVEKDPKGGRK 402 KIYLRGG+GVGAF+KIYGGRKSNG RPSHF KSSGSIAR LKQLE ++IVEKDPKGGR+ Sbjct: 62 KIYLRGGIGVGAFKKIYGGRKSNGVRPSHFAKSSGSIARHCLKQLEALNIVEKDPKGGRR 121
Query: 403 ITSNGQRDLDQVAGRIAVPAA 465 ITS+GQRDLDQVAGRIAV A Sbjct: 122 ITSDGQRDLDQVAGRIAVATA 142
>tr|A9SJ99|A9SJ99_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_109981 PE=4 SV=1 Length = 142
Score = 245 bits (625), Expect = 2e-63 Identities = 120/141 (85%), Positives = 130/141 (92%) Frame = +1
Query: 43 AKTVKDVSPHEFVRAYAAHLKRSGKIEVPSWADIVKTATFKELAPYDPDWYYIRAASMAR 222 AKTVKDV HEFVR YAAHLKRSGKIEVP+WAD+VKTATFKELAPYD DWYYIRAASMAR Sbjct: 2 AKTVKDVPSHEFVRNYAAHLKRSGKIEVPAWADLVKTATFKELAPYDADWYYIRAASMAR 61
Query: 223 KIYLRGGVGVGAFRKIYGGRKSNGSRPSHFGKSSGSIARDVLKQLEKIDIVEKDPKGGRK 402 KIYLRGG+GVGAF+KIYGGRKSNG RPSHF KSSGSIAR LKQLE ++IVEKD +GGR+ Sbjct: 62 KIYLRGGIGVGAFKKIYGGRKSNGVRPSHFAKSSGSIARHCLKQLEALNIVEKDVRGGRR 121
Query: 403 ITSNGQRDLDQVAGRIAVPAA 465 ITS+GQRDLDQVAGRIA+ AA Sbjct: 122 ITSDGQRDLDQVAGRIAIAAA 142
>tr|A5C4J2|A5C4J2_VITVI Putative uncharacterized protein (Chromosome chr17 scaffold_12, whole genome shotgun sequence) OS=Vitis vinifera GN=GSVIVT00016251001 PE=4 SV=1 Length = 143
Score = 244 bits (624), Expect = 2e-63 Identities = 118/141 (83%), Positives = 130/141 (92%) Frame = +1
Query: 34 MATAKTVKDVSPHEFVRAYAAHLKRSGKIEVPSWADIVKTATFKELAPYDPDWYYIRAAS 213 MATA+TVKDVSPHEFV AYAAHLKRSGKIE+P W DIVKTATFKELAPYDPDWYYIRAAS Sbjct: 1 MATARTVKDVSPHEFVNAYAAHLKRSGKIELPHWTDIVKTATFKELAPYDPDWYYIRAAS 60
Query: 214 MARKIYLRGGVGVGAFRKIYGGRKSNGSRPSHFGKSSGSIARDVLKQLEKIDIVEKDPKG 393 MARKIYLRGG+GVGAFR+IYGG K NGSRP HF KSSGSIAR +L+QL+ ++I+E D KG Sbjct: 61 MARKIYLRGGIGVGAFRRIYGGSKRNGSRPPHFCKSSGSIARHILQQLQTMNIIELDSKG 120
Query: 394 GRKITSNGQRDLDQVAGRIAV 456 GR+ITS+GQRDLDQVAGRIAV Sbjct: 121 GRRITSSGQRDLDQVAGRIAV 141
>tr|A9NKW9|A9NKW9_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 144
Score = 243 bits (621), Expect = 5e-63 Identities = 119/143 (83%), Positives = 130/143 (90%) Frame = +1
Query: 34 MATAKTVKDVSPHEFVRAYAAHLKRSGKIEVPSWADIVKTATFKELAPYDPDWYYIRAAS 213 MATA TVKDVSPHEFV AYAAHLKRSGKIE+P W D+VKTATFKELAPYDPDWYY+RAAS Sbjct: 1 MATACTVKDVSPHEFVTAYAAHLKRSGKIELPHWTDLVKTATFKELAPYDPDWYYVRAAS 60
Query: 214 MARKIYLRGGVGVGAFRKIYGGRKSNGSRPSHFGKSSGSIARDVLKQLEKIDIVEKDPKG 393 MARKIYLR G+GVGAF KIYGGR+ NG+RP HF KSSGSIAR VL+QLEK++IVE DP G Sbjct: 61 MARKIYLRKGIGVGAFSKIYGGRQRNGARPPHFCKSSGSIARHVLQQLEKMNIVEMDPNG 120
Query: 394 GRKITSNGQRDLDQVAGRIAVPA 462 GR+ITS+GQRDLDQVAGRIAV A Sbjct: 121 GRRITSSGQRDLDQVAGRIAVAA 143
>tr|A9NL45|A9NL45_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 144
Score = 241 bits (615), Expect = 3e-62 Identities = 114/143 (79%), Positives = 130/143 (90%) Frame = +1
Query: 34 MATAKTVKDVSPHEFVRAYAAHLKRSGKIEVPSWADIVKTATFKELAPYDPDWYYIRAAS 213 MATA TVKDVSPHEFVRAY+AHLKRSGKIE+P W D+VKTATFKELAPYDPDWYY+RAAS Sbjct: 1 MATACTVKDVSPHEFVRAYSAHLKRSGKIELPHWTDLVKTATFKELAPYDPDWYYVRAAS 60
Query: 214 MARKIYLRGGVGVGAFRKIYGGRKSNGSRPSHFGKSSGSIARDVLKQLEKIDIVEKDPKG 393 MARKIYLR G+GVGAFRKIYGG + NG+RP HF KSSGS+AR +L+QLEK++I+E DP G Sbjct: 61 MARKIYLRHGIGVGAFRKIYGGSQRNGARPPHFCKSSGSVARHILQQLEKMNIIEMDPNG 120
Query: 394 GRKITSNGQRDLDQVAGRIAVPA 462 GR+ITS+GQRDLDQVAGR+ V A Sbjct: 121 GRRITSSGQRDLDQVAGRVVVVA 143
>tr|A9PGL4|A9PGL4_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 143
Score = 239 bits (609), Expect = 1e-61 Identities = 112/141 (79%), Positives = 129/141 (91%) Frame = +1
Query: 34 MATAKTVKDVSPHEFVRAYAAHLKRSGKIEVPSWADIVKTATFKELAPYDPDWYYIRAAS 213 MATAK+VKDVSPHEFV+AY+AHLKRSGKIE+P W DIVKT FKELAPYDPDWYY+RAAS Sbjct: 1 MATAKSVKDVSPHEFVKAYSAHLKRSGKIELPLWTDIVKTGKFKELAPYDPDWYYVRAAS 60
Query: 214 MARKIYLRGGVGVGAFRKIYGGRKSNGSRPSHFGKSSGSIARDVLKQLEKIDIVEKDPKG 393 MARKIY+RGG+GVGAFR+IYGG K NGSRP HF KSSGSIAR +L+QL+ ++I++ DPKG Sbjct: 61 MARKIYIRGGLGVGAFRRIYGGSKRNGSRPPHFCKSSGSIARHILQQLQNVNIIDIDPKG 120
Query: 394 GRKITSNGQRDLDQVAGRIAV 456 GR+ITS+GQRDLDQVAGRI V Sbjct: 121 GRRITSSGQRDLDQVAGRIVV 141
>tr|A5BGC5|A5BGC5_VITVI Putative uncharacterized protein (Chromosome chr1 scaffold_5, whole genome shotgun sequence) OS=Vitis vinifera GN=GSVIVT00030059001 PE=4 SV=1 Length = 146
Score = 236 bits (603), Expect = 7e-61 Identities = 111/138 (80%), Positives = 127/138 (92%) Frame = +1
Query: 43 AKTVKDVSPHEFVRAYAAHLKRSGKIEVPSWADIVKTATFKELAPYDPDWYYIRAASMAR 222 A+TVKDVSPHEFV+AY++HLKRSGKIE+P W DIVKTATFKELAPYDPDWYY+RAASMAR Sbjct: 7 ARTVKDVSPHEFVKAYSSHLKRSGKIELPHWTDIVKTATFKELAPYDPDWYYVRAASMAR 66
Query: 223 KIYLRGGVGVGAFRKIYGGRKSNGSRPSHFGKSSGSIARDVLKQLEKIDIVEKDPKGGRK 402 KIYLR G+GVG FR+IYGG K NGSRP HF KSSGSIAR +L+QLEK++I+E DP+GGR+ Sbjct: 67 KIYLRQGLGVGGFRRIYGGSKRNGSRPPHFCKSSGSIARHILQQLEKMNIIENDPRGGRR 126
Query: 403 ITSNGQRDLDQVAGRIAV 456 ITS+GQRDLDQVAGRI V Sbjct: 127 ITSSGQRDLDQVAGRIVV 144
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