| DK954689 |
| Clone id |
TST39A01NGRL0021_B19 |
| Library |
TST39 |
| Length |
585 |
| Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0021_B19. 5' end sequence. |
| Accession |
DK954689 |
| Tissue type |
prothallia with plantlets |
| Developmental stage |
gametophytes with sporophytes |
| Contig ID |
CL3034Contig1 |
| Sequence |
GGGGTGGAGATCGCGGTGGCAGAAGAGGAGGCCGTGGAGGAGGAAGAGGTGGAATGAGAG GAGGGGCCAAGGTTGTCATTGAGCCTCACAGACATGAAGGTGTCTTTATTGCTAAAGCTA AGGAAGATGCTCTTGTCACATTGAACATGGTTTCGGGTGAAAGTGTCTATGGAGAAAAGC GAGTATCTGTGGAGGCTGAAGAAGGAAAGAAGGTAGAATACAGGGTCTGGAACCCTTTCC GCTCAAAGCTGGCCGCAGCCATTTTGGGTGGTGTTGACAACATCTGGATTAAACCTGGAG CACATGTGCTCTATCTAGGAGCTGCTTCCGGAACAACTGTCTCTCACGTCTCAGACATTG TGGGACCGTCAGGCATTGTTTATGCAGTAGAGTTTTCTCACAGAAGTGGGCGTGACTTAG TCAACATGGCCAAGAAGAGGACAAATGTTATACCGATCATTGAAGATGCCCGGCATCCTC AACGATACCGCATGCTAGTAGGGATGGTTGATGTGATATTTGCAGATGTTGCCCAACCTG ATCAGGCACGAATCGTTGCTTTGAATGCTCACTACTTCCTGAAGA |
| ■■Homology search results ■■ |
- |
| Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
| sp_hit_id |
Q94AH9 |
| Definition |
sp|Q94AH9|FBRL2_ARATH rRNA 2'-O-methyltransferase fibrillarin 2 OS=Arabidopsis thaliana |
| Align length |
173 |
| Score (bit) |
303.0 |
| E-value |
4.0e-82 |
| Report |
 |
| TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
| tr_hit_id |
A9TM73 |
| Definition |
tr|A9TM73|A9TM73_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
| Align length |
173 |
| Score (bit) |
321.0 |
| E-value |
2.0e-86 |
| Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK954689|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0021_B19, 5' (585 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9TM73|A9TM73_PHYPA Predicted protein OS=Physcomitrella paten... 321 2e-86 tr|A9S7H0|A9S7H0_PHYPA Predicted protein OS=Physcomitrella paten... 321 2e-86 tr|A9RL91|A9RL91_PHYPA Predicted protein OS=Physcomitrella paten... 321 2e-86 tr|A9T765|A9T765_PHYPA Predicted protein OS=Physcomitrella paten... 318 1e-85 tr|A9T052|A9T052_PHYPA Predicted protein OS=Physcomitrella paten... 318 1e-85 tr|O65058|O65058_PICMA Probable fibrillarin (Fragment) OS=Picea ... 317 2e-85 tr|A9P1P1|A9P1P1_PICSI Putative uncharacterized protein OS=Picea... 316 5e-85 tr|A9TSL7|A9TSL7_PHYPA Predicted protein OS=Physcomitrella paten... 310 3e-83 tr|A7QG46|A7QG46_VITVI Chromosome undetermined scaffold_91, whol... 308 2e-82 tr|Q6K701|Q6K701_ORYSJ Putative fibrillarin (Putative uncharacte... 305 9e-82 tr|A2XB50|A2XB50_ORYSI Putative uncharacterized protein OS=Oryza... 305 9e-82 tr|B7FA85|B7FA85_ORYSJ cDNA, clone: J100055L06, full insert sequ... 305 2e-81 tr|Q0WLG3|Q0WLG3_ARATH Fibrillarin homolog OS=Arabidopsis thalia... 303 5e-81 tr|Q25C91|Q25C91_TOBAC Tobacco fibrillarin homolog OS=Nicotiana ... 302 1e-80 tr|Q1EI36|Q1EI36_NICBE Fibrillarin 2 OS=Nicotiana benthamiana GN... 301 1e-80 tr|B7VCB9|B7VCB9_NICBE Fibrillarin 2 OS=Nicotiana benthamiana GN... 301 1e-80 tr|B6T4G7|B6T4G7_MAIZE Fibrillarin-2 OS=Zea mays PE=2 SV=1 298 1e-79 tr|Q6AT27|Q6AT27_ORYSJ Os05g0176000 protein OS=Oryza sativa subs... 295 1e-78 tr|B3S5V8|B3S5V8_TRIAD Putative uncharacterized protein OS=Trich... 293 4e-78 tr|Q4S9B4|Q4S9B4_TETNG Chromosome undetermined SCAF14699, whole ... 290 4e-77 tr|B8CBC2|B8CBC2_THAPS Predicted protein OS=Thalassiosira pseudo... 289 9e-77 tr|Q7ZTZ4|Q7ZTZ4_DANRE Fibrillarin OS=Danio rerio GN=fbl PE=2 SV=1 288 1e-76 tr|Q6P623|Q6P623_XENTR Fibrillarin OS=Xenopus tropicalis GN=fbl ... 288 2e-76 tr|A4RZV7|A4RZV7_OSTLU Predicted protein OS=Ostreococcus lucimar... 288 2e-76 tr|Q7QHL9|Q7QHL9_ANOGA AGAP011244-PA OS=Anopheles gambiae GN=AGA... 288 2e-76 tr|B6JX17|B6JX17_SCHJP rRNA 2'-O-methyltransferase fibrillarin O... 287 3e-76 tr|B5X300|B5X300_SALSA rRNA 2-O-methyltransferase fibrillarin OS... 287 3e-76 tr|A8QGG2|A8QGG2_BRUMA Fibrillarin, putative OS=Brugia malayi GN... 287 3e-76 tr|A7S8G2|A7S8G2_NEMVE Predicted protein OS=Nematostella vectens... 286 4e-76 tr|Q7ZX93|Q7ZX93_XENLA LOC398434 protein (Fragment) OS=Xenopus l... 286 6e-76
>tr|A9TM73|A9TM73_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_196367 PE=4 SV=1 Length = 319
Score = 321 bits (822), Expect = 2e-86 Identities = 157/173 (90%), Positives = 166/173 (95%) Frame = +3
Query: 66 AKVVIEPHRHEGVFIAKAKEDALVTLNMVSGESVYGEKRVSVEAEEGKKVEYRVWNPFRS 245 AKV+IEPHRHEGVF+AKAKEDALVT N+V GESVYGEKR+SV+ E+G K EYRVWNPFRS Sbjct: 77 AKVIIEPHRHEGVFVAKAKEDALVTKNLVPGESVYGEKRISVDNEDGTKTEYRVWNPFRS 136
Query: 246 KLAAAILGGVDNIWIKPGAHVLYLGAASGTTVSHVSDIVGPSGIVYAVEFSHRSGRDLVN 425 KLAAAILGGVDNIWIKPGAHVLYLGAASGTTVSHVSD+VGPSGIVYAVEFSHRSGRDLVN Sbjct: 137 KLAAAILGGVDNIWIKPGAHVLYLGAASGTTVSHVSDVVGPSGIVYAVEFSHRSGRDLVN 196
Query: 426 MAKKRTNVIPIIEDARHPQRYRMLVGMVDVIFADVAQPDQARIVALNAHYFLK 584 MAKKRTNVIPIIEDARHP +YRMLVGMVDVIFADVAQPDQARIVA+NAH FLK Sbjct: 197 MAKKRTNVIPIIEDARHPMKYRMLVGMVDVIFADVAQPDQARIVAINAHNFLK 249
>tr|A9S7H0|A9S7H0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_75588 PE=4 SV=1 Length = 271
Score = 321 bits (822), Expect = 2e-86 Identities = 157/173 (90%), Positives = 166/173 (95%) Frame = +3
Query: 66 AKVVIEPHRHEGVFIAKAKEDALVTLNMVSGESVYGEKRVSVEAEEGKKVEYRVWNPFRS 245 AKV+IEPHRHEGVF+AKAKEDALVT N+V GESVYGEKR+SV+ E+G K EYRVWNPFRS Sbjct: 29 AKVIIEPHRHEGVFVAKAKEDALVTKNLVPGESVYGEKRISVDNEDGTKTEYRVWNPFRS 88
Query: 246 KLAAAILGGVDNIWIKPGAHVLYLGAASGTTVSHVSDIVGPSGIVYAVEFSHRSGRDLVN 425 KLAAAILGGVDNIWIKPGAHVLYLGAASGTTVSHVSD+VGPSGIVYAVEFSHRSGRDLVN Sbjct: 89 KLAAAILGGVDNIWIKPGAHVLYLGAASGTTVSHVSDVVGPSGIVYAVEFSHRSGRDLVN 148
Query: 426 MAKKRTNVIPIIEDARHPQRYRMLVGMVDVIFADVAQPDQARIVALNAHYFLK 584 MAKKRTNVIPIIEDARHP +YRMLVGMVDVIFADVAQPDQARIVA+NAH FLK Sbjct: 149 MAKKRTNVIPIIEDARHPMKYRMLVGMVDVIFADVAQPDQARIVAINAHNFLK 201
>tr|A9RL91|A9RL91_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_115973 PE=4 SV=1 Length = 261
Score = 321 bits (822), Expect = 2e-86 Identities = 157/173 (90%), Positives = 166/173 (95%) Frame = +3
Query: 66 AKVVIEPHRHEGVFIAKAKEDALVTLNMVSGESVYGEKRVSVEAEEGKKVEYRVWNPFRS 245 AKV+IEPHRHEGVF+AKAKEDALVT N+V GESVYGEKR+SV+ E+G K EYRVWNPFRS Sbjct: 19 AKVIIEPHRHEGVFVAKAKEDALVTKNLVPGESVYGEKRISVDNEDGTKTEYRVWNPFRS 78
Query: 246 KLAAAILGGVDNIWIKPGAHVLYLGAASGTTVSHVSDIVGPSGIVYAVEFSHRSGRDLVN 425 KLAAAILGGVDNIWIKPGAHVLYLGAASGTTVSHVSD+VGPSGIVYAVEFSHRSGRDLVN Sbjct: 79 KLAAAILGGVDNIWIKPGAHVLYLGAASGTTVSHVSDVVGPSGIVYAVEFSHRSGRDLVN 138
Query: 426 MAKKRTNVIPIIEDARHPQRYRMLVGMVDVIFADVAQPDQARIVALNAHYFLK 584 MAKKRTNVIPIIEDARHP +YRMLVGMVDVIFADVAQPDQARIVA+NAH FLK Sbjct: 139 MAKKRTNVIPIIEDARHPMKYRMLVGMVDVIFADVAQPDQARIVAINAHNFLK 191
>tr|A9T765|A9T765_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_141412 PE=4 SV=1 Length = 271
Score = 318 bits (816), Expect = 1e-85 Identities = 156/173 (90%), Positives = 165/173 (95%) Frame = +3
Query: 66 AKVVIEPHRHEGVFIAKAKEDALVTLNMVSGESVYGEKRVSVEAEEGKKVEYRVWNPFRS 245 AKV+IEPHRH GVF+AKAKEDALVT N+V GESVYGEKR+SV+ E+G K EYRVWNPFRS Sbjct: 29 AKVIIEPHRHAGVFVAKAKEDALVTKNLVPGESVYGEKRISVDNEDGTKTEYRVWNPFRS 88
Query: 246 KLAAAILGGVDNIWIKPGAHVLYLGAASGTTVSHVSDIVGPSGIVYAVEFSHRSGRDLVN 425 KLAAAILGGVDNIWIKPGAHVLYLGAASGTTVSHVSD+VGPSGIVYAVEFSHRSGRDLVN Sbjct: 89 KLAAAILGGVDNIWIKPGAHVLYLGAASGTTVSHVSDVVGPSGIVYAVEFSHRSGRDLVN 148
Query: 426 MAKKRTNVIPIIEDARHPQRYRMLVGMVDVIFADVAQPDQARIVALNAHYFLK 584 MAKKRTNVIPIIEDARHP +YRMLVGMVDVIFADVAQPDQARIVA+NAH FLK Sbjct: 149 MAKKRTNVIPIIEDARHPMKYRMLVGMVDVIFADVAQPDQARIVAINAHNFLK 201
>tr|A9T052|A9T052_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_138183 PE=4 SV=1 Length = 270
Score = 318 bits (816), Expect = 1e-85 Identities = 156/173 (90%), Positives = 165/173 (95%) Frame = +3
Query: 66 AKVVIEPHRHEGVFIAKAKEDALVTLNMVSGESVYGEKRVSVEAEEGKKVEYRVWNPFRS 245 AKV+IEPHRHEGVF+AKAKEDALVT N+V GESVYGEKR+SV+ E+G K EYRVWNPFRS Sbjct: 28 AKVIIEPHRHEGVFVAKAKEDALVTKNLVPGESVYGEKRISVDNEDGTKTEYRVWNPFRS 87
Query: 246 KLAAAILGGVDNIWIKPGAHVLYLGAASGTTVSHVSDIVGPSGIVYAVEFSHRSGRDLVN 425 KLAAAILGGVDNIWIKPGAHVLYLGAASGTTVSHVSD+VGPSGIVYAVEFSHRSGRDLVN Sbjct: 88 KLAAAILGGVDNIWIKPGAHVLYLGAASGTTVSHVSDVVGPSGIVYAVEFSHRSGRDLVN 147
Query: 426 MAKKRTNVIPIIEDARHPQRYRMLVGMVDVIFADVAQPDQARIVALNAHYFLK 584 MAKKRTNVIPIIEDARHP +YRMLV MVDVIFADVAQPDQARIVA+NAH FLK Sbjct: 148 MAKKRTNVIPIIEDARHPMKYRMLVAMVDVIFADVAQPDQARIVAINAHNFLK 200
>tr|O65058|O65058_PICMA Probable fibrillarin (Fragment) OS=Picea mariana GN=Sb21 PE=2 SV=1 Length = 249
Score = 317 bits (813), Expect = 2e-85 Identities = 158/173 (91%), Positives = 164/173 (94%) Frame = +3
Query: 66 AKVVIEPHRHEGVFIAKAKEDALVTLNMVSGESVYGEKRVSVEAEEGKKVEYRVWNPFRS 245 AKVVIEPHRHEGVFIAKAKEDALVT NM +GESVYGEKR+SV+ E+ K EYRVWNPFRS Sbjct: 6 AKVVIEPHRHEGVFIAKAKEDALVTKNMAAGESVYGEKRISVQNEDSTKTEYRVWNPFRS 65
Query: 246 KLAAAILGGVDNIWIKPGAHVLYLGAASGTTVSHVSDIVGPSGIVYAVEFSHRSGRDLVN 425 KLAAAILGGVDNIWIKPG HVLYLGAASGTTVSHVSDIVGP+GIVYAVE SHRSGRDLVN Sbjct: 66 KLAAAILGGVDNIWIKPGTHVLYLGAASGTTVSHVSDIVGPTGIVYAVEMSHRSGRDLVN 125
Query: 426 MAKKRTNVIPIIEDARHPQRYRMLVGMVDVIFADVAQPDQARIVALNAHYFLK 584 MAKKRTNVIPIIEDAR+P RYRMLVGMVDVIFADVAQPDQARIVALNAHYFLK Sbjct: 126 MAKKRTNVIPIIEDARYPVRYRMLVGMVDVIFADVAQPDQARIVALNAHYFLK 178
>tr|A9P1P1|A9P1P1_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 312
Score = 316 bits (810), Expect = 5e-85 Identities = 157/173 (90%), Positives = 164/173 (94%) Frame = +3
Query: 66 AKVVIEPHRHEGVFIAKAKEDALVTLNMVSGESVYGEKRVSVEAEEGKKVEYRVWNPFRS 245 A+VVIEPHRHEGVFIAKAKEDALVT NM +GESVYGEKR+SV+ E+ K EYRVWNPFRS Sbjct: 69 ARVVIEPHRHEGVFIAKAKEDALVTKNMAAGESVYGEKRISVQNEDSTKTEYRVWNPFRS 128
Query: 246 KLAAAILGGVDNIWIKPGAHVLYLGAASGTTVSHVSDIVGPSGIVYAVEFSHRSGRDLVN 425 KLAAAILGGVDNIWIKPG HVLYLGAASGTTVSHVSDIVGP+GIVYAVE SHRSGRDLVN Sbjct: 129 KLAAAILGGVDNIWIKPGTHVLYLGAASGTTVSHVSDIVGPTGIVYAVEMSHRSGRDLVN 188
Query: 426 MAKKRTNVIPIIEDARHPQRYRMLVGMVDVIFADVAQPDQARIVALNAHYFLK 584 MAKKRTNVIPIIEDAR+P RYRMLVGMVDVIFADVAQPDQARIVALNAHYFLK Sbjct: 189 MAKKRTNVIPIIEDARYPVRYRMLVGMVDVIFADVAQPDQARIVALNAHYFLK 241
>tr|A9TSL7|A9TSL7_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_60980 PE=4 SV=1 Length = 247
Score = 310 bits (795), Expect = 3e-83 Identities = 153/173 (88%), Positives = 162/173 (93%) Frame = +3
Query: 66 AKVVIEPHRHEGVFIAKAKEDALVTLNMVSGESVYGEKRVSVEAEEGKKVEYRVWNPFRS 245 AKV+IE HRHEGVF+AKAKEDALVT N+V GESVYGEKR+SV+ E+ K EYRVWNPFRS Sbjct: 5 AKVIIESHRHEGVFVAKAKEDALVTKNLVPGESVYGEKRISVDNEDATKTEYRVWNPFRS 64
Query: 246 KLAAAILGGVDNIWIKPGAHVLYLGAASGTTVSHVSDIVGPSGIVYAVEFSHRSGRDLVN 425 KLAAAILGGVDNIWIKPGAHVLYLGAASGTTVSHVSD+VGPSGIVYAVEFSHRSGRDLVN Sbjct: 65 KLAAAILGGVDNIWIKPGAHVLYLGAASGTTVSHVSDVVGPSGIVYAVEFSHRSGRDLVN 124
Query: 426 MAKKRTNVIPIIEDARHPQRYRMLVGMVDVIFADVAQPDQARIVALNAHYFLK 584 MAKK TNVIPIIEDARH +YRMLVGMVDVIFADVAQPDQARIVA+NAH FLK Sbjct: 125 MAKKHTNVIPIIEDARHSMKYRMLVGMVDVIFADVAQPDQARIVAINAHNFLK 177
>tr|A7QG46|A7QG46_VITVI Chromosome undetermined scaffold_91, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00037695001 PE=4 SV=1 Length = 245
Score = 308 bits (788), Expect = 2e-82 Identities = 149/173 (86%), Positives = 163/173 (94%) Frame = +3
Query: 66 AKVVIEPHRHEGVFIAKAKEDALVTLNMVSGESVYGEKRVSVEAEEGKKVEYRVWNPFRS 245 ++VV+EPHRHEGVFIAK KEDALVT NMV GE+VY EKR+SV+ E+G K+EYRVWNPFRS Sbjct: 5 SRVVVEPHRHEGVFIAKGKEDALVTKNMVPGEAVYNEKRISVQNEDGSKIEYRVWNPFRS 64
Query: 246 KLAAAILGGVDNIWIKPGAHVLYLGAASGTTVSHVSDIVGPSGIVYAVEFSHRSGRDLVN 425 KLAAAILGGVD IWIKPGA VLYLGAASGTTVSHVSD+VGP+G+VYAVEFSHRSGRDLVN Sbjct: 65 KLAAAILGGVDEIWIKPGARVLYLGAASGTTVSHVSDVVGPTGVVYAVEFSHRSGRDLVN 124
Query: 426 MAKKRTNVIPIIEDARHPQRYRMLVGMVDVIFADVAQPDQARIVALNAHYFLK 584 MAKKRTNVIPIIEDARHP +YRMLVGMVDVIF+DVAQPDQARI+ALNA YFLK Sbjct: 125 MAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLK 177
>tr|Q6K701|Q6K701_ORYSJ Putative fibrillarin (Putative uncharacterized protein) OS=Oryza sativa subsp. japonica GN=P0474F11.25-1 PE=4 SV=1 Length = 306
Score = 305 bits (782), Expect = 9e-82 Identities = 150/173 (86%), Positives = 161/173 (93%) Frame = +3
Query: 66 AKVVIEPHRHEGVFIAKAKEDALVTLNMVSGESVYGEKRVSVEAEEGKKVEYRVWNPFRS 245 +KVV+ PH+H GVFIAKAKEDAL T NMV GESVYGEKR+SV+ E+G KVEYRVWNPFRS Sbjct: 66 SKVVVVPHKHNGVFIAKAKEDALCTKNMVPGESVYGEKRISVQNEDGTKVEYRVWNPFRS 125
Query: 246 KLAAAILGGVDNIWIKPGAHVLYLGAASGTTVSHVSDIVGPSGIVYAVEFSHRSGRDLVN 425 KLAAA+LGGVDNIWI PG VLYLGAASGTTVSHVSDIVGP+G+VYAVEFSHRSGRDLVN Sbjct: 126 KLAAAVLGGVDNIWIAPGTRVLYLGAASGTTVSHVSDIVGPTGLVYAVEFSHRSGRDLVN 185
Query: 426 MAKKRTNVIPIIEDARHPQRYRMLVGMVDVIFADVAQPDQARIVALNAHYFLK 584 MAKKRTNVIPIIEDARHP RYRMLVGMVDVIF+DVAQPDQARI+ALNA YFLK Sbjct: 186 MAKKRTNVIPIIEDARHPARYRMLVGMVDVIFSDVAQPDQARILALNASYFLK 238
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