DK954736
Clone id TST39A01NGRL0021_D19
Library
Length 585
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0021_D19. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence
GCAGGAGGGCGTCGATATGAGCCCGGCTGCCGTGGATATGAGCAGCAGCGCCATGGATGC
TCTCTCCTGTGCGAGCCTCTCTGTGCGCCAGTCATCCCTCCGGCGCTGGTCCTCCTCTCC
TCTGTTCGCCAATCGCCTGGCTATGCCCAGCTCTGAGCTTCCTTTGTGCCGCTCTACCTC
AGGTGCTTCGTCGTCTCCTTCAAAGCCTCTCACTATAGCTAACTCTTACAGCCCCAGGCG
GCCTTCTGATAGAAGCTTCAGAAGGGACCAGCCCAACGTGTACGAGCTGGACTTGGAGGA
GCAGGTGAGCCAGATTGATATGGATCCCAACAAGATGCTACAGCCTGGAGACCCCAATTC
TATGCAGGCCATTATTAAGGATGTCATGCCTGTAGGTTACTTCGTCTCTCTGCCCACAGG
CAGAGATGGGTATCTTCCAGCAGATGACTTGGGCTTTACAGGTGGGCTTGCTATTCTGCG
CAAGCTTTTCAAGGAGGGTCAAGAGATTACTGTGCGCATTGTTTGTCGCGGTGGGGCAGG
AAGGGAGATTGTTTCTGTGAAAAAGCCTGAGTTTGCCCCTCCCAG
■■Homology search results ■■ -
sp_hit_id Q6K8Z4
Definition sp|Q6K8Z4|FH7_ORYSJ Formin-like protein 7 OS=Oryza sativa subsp. japonica
Align length 54
Score (bit) 33.5
E-value 0.77
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK954736|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0021_D19, 5'
(570 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q6K8Z4|FH7_ORYSJ Formin-like protein 7 OS=Oryza sativa subsp.... 33 0.77
sp|A6L0A5|PNP_BACV8 Polyribonucleotide nucleotidyltransferase OS... 33 0.99
sp|Q64N73|PNP_BACFR Polyribonucleotide nucleotidyltransferase OS... 33 1.3
sp|Q5L7Z7|PNP_BACFN Polyribonucleotide nucleotidyltransferase OS... 33 1.3
sp|Q8A4N6|PNP_BACTN Polyribonucleotide nucleotidyltransferase OS... 32 1.7
sp|Q8R370|USBP1_MOUSE USH1C-binding protein 1 OS=Mus musculus GN... 32 1.7
sp|A5URV5|PNP_ROSS1 Polyribonucleotide nucleotidyltransferase OS... 32 2.2
sp|O65405|CRK28_ARATH Cysteine-rich receptor-like protein kinase... 32 2.2
sp|O36027|WSP1_SCHPO Wiskott-Aldrich syndrome protein homolog 1 ... 32 2.2
sp|Q30TH2|PNP_SULDN Polyribonucleotide nucleotidyltransferase OS... 32 2.9
sp|A6LFK9|PNP_PARD8 Polyribonucleotide nucleotidyltransferase OS... 32 2.9
sp|Q9P5N2|YH83_SCHPO Uncharacterized amino-acid permease C359.03... 31 3.8
sp|A6NMK8|YE035_HUMAN Uncharacterized protein LOC100131897 OS=Ho... 31 4.9
sp|Q9JZ44|RS1_NEIMB 30S ribosomal protein S1 OS=Neisseria mening... 31 4.9
sp|O14269|YFPE_SCHPO Uncharacterized protein C7D4.14c OS=Schizos... 31 5.0
sp|Q8CBR1|ILDR1_MOUSE Immunoglobulin-like domain-containing rece... 30 6.4
sp|Q31GJ9|PNP_THICR Polyribonucleotide nucleotidyltransferase OS... 30 8.4

>sp|Q6K8Z4|FH7_ORYSJ Formin-like protein 7 OS=Oryza sativa subsp.
japonica GN=FH7 PE=2 SV=2
Length = 1385

Score = 33.5 bits (75), Expect = 0.77
Identities = 21/54 (38%), Positives = 26/54 (48%)
Frame = -1

Query: 567 GFFTETISLPAPPRQTMRTVIS*PSLKSLRRIASPPVKPKSSAGRYPSLPVGRE 406
G T I P PP QT V S PS + +RI PP P ++ SLP R+
Sbjct: 817 GMQTRPIPPPPPPSQTNSLVSSFPS--TSKRIPPPPPPPSQTSSLVSSLPSSRK 868


>sp|A6L0A5|PNP_BACV8 Polyribonucleotide nucleotidyltransferase
OS=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 /
NCTC 11154) GN=pnp PE=3 SV=1
Length = 711

Score = 33.1 bits (74), Expect = 0.99
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = +2

Query: 374 IKDVMPVGYFVSLPTGRDGYLPADDLGFTGGLAILRKLFKEGQEITVRIV 523
++ VMP G FV G+DG L ++ + I KEG EI V+++
Sbjct: 636 VRSVMPYGVFVEFLPGKDGLLHISEIDWKRLETIEEAGLKEGDEIEVKLL 685


>sp|Q64N73|PNP_BACFR Polyribonucleotide nucleotidyltransferase
OS=Bacteroides fragilis GN=pnp PE=3 SV=1
Length = 708

Score = 32.7 bits (73), Expect = 1.3
Identities = 15/50 (30%), Positives = 26/50 (52%)
Frame = +2

Query: 374 IKDVMPVGYFVSLPTGRDGYLPADDLGFTGGLAILRKLFKEGQEITVRIV 523
++ +MP G FV G+DG L ++ + + KEG EI V+++
Sbjct: 636 VRSIMPYGAFVEFLPGKDGLLHISEIDWKRLETVEEAGIKEGDEIEVKLI 685


>sp|Q5L7Z7|PNP_BACFN Polyribonucleotide nucleotidyltransferase
OS=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343)
GN=pnp PE=3 SV=1
Length = 708

Score = 32.7 bits (73), Expect = 1.3
Identities = 15/50 (30%), Positives = 26/50 (52%)
Frame = +2

Query: 374 IKDVMPVGYFVSLPTGRDGYLPADDLGFTGGLAILRKLFKEGQEITVRIV 523
++ +MP G FV G+DG L ++ + + KEG EI V+++
Sbjct: 636 VRSIMPYGAFVEFLPGKDGLLHISEIDWKRLETVEEAGIKEGDEIEVKLI 685


>sp|Q8A4N6|PNP_BACTN Polyribonucleotide nucleotidyltransferase
OS=Bacteroides thetaiotaomicron GN=pnp PE=3 SV=1
Length = 708

Score = 32.3 bits (72), Expect = 1.7
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = +2

Query: 374 IKDVMPVGYFVSLPTGRDGYLPADDLGFTGGLAILRKLFKEGQEITVRIV 523
++ +MP G F+ G+DG L ++ + + KEG EI V+++
Sbjct: 636 VRSIMPYGAFIEFLPGKDGLLHISEIDWKRLETVEEAGIKEGDEIEVKLI 685


>sp|Q8R370|USBP1_MOUSE USH1C-binding protein 1 OS=Mus musculus
GN=Ushbp1 PE=2 SV=1
Length = 680

Score = 32.3 bits (72), Expect = 1.7
Identities = 18/49 (36%), Positives = 29/49 (59%)
Frame = -1

Query: 165 KGSSELGIARRLANRGEEDQRRRDDWRTERLAQERASMALLLISTAAGL 19
K S L +A R A+R +E+QRR+ + + RL ++A +L +TA L
Sbjct: 619 KAHSALALAFRGAHRKQEEQRRKLEQQVARLQAQQAEELAVLTATARAL 667


>sp|A5URV5|PNP_ROSS1 Polyribonucleotide nucleotidyltransferase
OS=Roseiflexus sp. (strain RS-1) GN=pnp PE=3 SV=1
Length = 747

Score = 32.0 bits (71), Expect = 2.2
Identities = 16/47 (34%), Positives = 26/47 (55%)
Frame = +2

Query: 383 VMPVGYFVSLPTGRDGYLPADDLGFTGGLAILRKLFKEGQEITVRIV 523
+MP G FV+L G+DG + +L G + + + K G EI V ++
Sbjct: 639 IMPFGAFVNLAPGKDGMVHVSELD-VGRVENVEDVIKMGDEINVMVI 684


>sp|O65405|CRK28_ARATH Cysteine-rich receptor-like protein kinase 28
OS=Arabidopsis thaliana GN=CRK28 PE=2 SV=2
Length = 683

Score = 32.0 bits (71), Expect = 2.2
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = +2

Query: 401 FVSLPTGRDGYLPADDLGFTGGLAILRKLFKEGQEITV-RIVCRGGAG 541
F +L D + P ++LG G ++ + +F GQEI V R+ C G G
Sbjct: 351 FETLKAATDNFSPENELGRGGFGSVYKGVFSGGQEIAVKRLSCTSGQG 398


>sp|O36027|WSP1_SCHPO Wiskott-Aldrich syndrome protein homolog 1
OS=Schizosaccharomyces pombe GN=wsp1 PE=1 SV=3
Length = 574

Score = 32.0 bits (71), Expect = 2.2
Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = -1

Query: 540 PAPPRQTMRTVIS*PSLKSLRRIASPPVKPKSSAGR-YPSLP 418
P PPR T P L S R +++PP P + GR P+LP
Sbjct: 363 PPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALP 404


>sp|Q30TH2|PNP_SULDN Polyribonucleotide nucleotidyltransferase
OS=Sulfurimonas denitrificans (strain ATCC 33889 / DSM
1251) GN=pnp PE=3 SV=1
Length = 721

Score = 31.6 bits (70), Expect = 2.9
Identities = 17/53 (32%), Positives = 28/53 (52%)
Frame = +2

Query: 365 QAIIKDVMPVGYFVSLPTGRDGYLPADDLGFTGGLAILRKLFKEGQEITVRIV 523
+ I+K ++ G F+ LP G DG L + + + + KEG+EI V I+
Sbjct: 658 KGIVKKIVEFGAFIELPDGVDGLLHISKIS-DQRVEKVSDILKEGEEINVEIL 709


tr_hit_id A7PEK9
Definition tr|A7PEK9|A7PEK9_VITVI Chromosome chr11 scaffold_13, whole genome shotgun sequence OS=Vitis vinifera
Align length 69
Score (bit) 37.4
E-value 0.59
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK954736|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0021_D19, 5'
(570 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A7PEK9|A7PEK9_VITVI Chromosome chr11 scaffold_13, whole genom... 37 0.59
tr|A6E805|A6E805_9SPHI Polynucleotide phosphorylase/polyadenylas... 37 0.77
tr|B8PN02|B8PN02_9APHY Predicted protein OS=Postia placenta Mad-... 37 0.78
tr|B8P3D7|B8P3D7_9APHY Predicted protein OS=Postia placenta Mad-... 37 0.78
tr|B3QSU3|B3QSU3_CHLT3 Ribosomal protein S1 OS=Chloroherpeton th... 37 1.00
tr|A7I0M8|A7I0M8_CAMHC 30S ribosomal protein S1 OS=Campylobacter... 37 1.00
tr|B8PMW1|B8PMW1_9APHY Predicted protein OS=Postia placenta Mad-... 37 1.0
tr|B8PM62|B8PM62_9APHY Predicted protein OS=Postia placenta Mad-... 37 1.0
tr|B8PIT6|B8PIT6_9APHY Predicted protein OS=Postia placenta Mad-... 37 1.0
tr|B8P8M1|B8P8M1_9APHY Predicted protein OS=Postia placenta Mad-... 37 1.0
tr|B8P873|B8P873_9APHY Predicted protein OS=Postia placenta Mad-... 36 1.3
tr|A6NQP1|A6NQP1_9BACE Putative uncharacterized protein OS=Bacte... 36 1.7
tr|B8PLX5|B8PLX5_9APHY Predicted protein OS=Postia placenta Mad-... 36 1.7
tr|B8PLJ0|B8PLJ0_9APHY Predicted protein OS=Postia placenta Mad-... 36 1.7
tr|B8PJD5|B8PJD5_9APHY Predicted protein OS=Postia placenta Mad-... 36 1.7
tr|B8P9K3|B8P9K3_9APHY Predicted protein OS=Postia placenta Mad-... 36 1.7
tr|B6YKM5|B6YKM5_9BACT RNA binding S1 domain protein OS=Thermoto... 35 2.2
tr|B8PKA8|B8PKA8_9APHY Predicted protein OS=Postia placenta Mad-... 35 2.3
tr|B8PJB7|B8PJB7_9APHY Predicted protein OS=Postia placenta Mad-... 35 2.3
tr|B8P4Q7|B8P4Q7_9APHY Predicted protein OS=Postia placenta Mad-... 35 2.3
tr|B4U6I5|B4U6I5_HYDS0 RNA binding S1 domain protein OS=Hydrogen... 35 2.9
tr|A6LNG6|A6LNG6_THEM4 Hydroxymethylbutenyl pyrophosphate reduct... 35 2.9
tr|B8P242|B8P242_9APHY Predicted protein OS=Postia placenta Mad-... 35 3.0
tr|B5YH71|B5YH71_THEYD 30S ribosomal protein S1 OS=Thermodesulfo... 35 3.8
tr|A4XKP1|A4XKP1_CALS8 Hydroxymethylbutenyl pyrophosphate reduct... 35 3.8
tr|Q08Q81|Q08Q81_STIAU Putative uncharacterized protein OS=Stigm... 35 3.8
tr|B3DUV3|B3DUV3_METI4 Ribosomal protein S1 OS=Methylacidiphilum... 34 5.0
tr|B8PMD6|B8PMD6_9APHY Predicted protein OS=Postia placenta Mad-... 34 5.0
tr|Q8KFN4|Q8KFN4_CHLTE Ribosomal protein S1 OS=Chlorobium tepidu... 34 6.5
tr|Q1D6H1|Q1D6H1_MYXXD Ribosomal protein S1 family protein OS=My... 34 6.5

>tr|A7PEK9|A7PEK9_VITVI Chromosome chr11 scaffold_13, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00016702001
PE=4 SV=1
Length = 553

Score = 37.4 bits (85), Expect = 0.59
Identities = 21/69 (30%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Frame = +2

Query: 362 MQAIIKDVMPVGYFVSLPTGRDGYLPADDLGFTG-GLAILRKLFKEGQEITVRIVCRGGA 538
++ +K++ G F+SLP G +G+LP + G G + + GQE++VR++ R
Sbjct: 266 LEGTVKNLNRAGAFISLPEGEEGFLPTSEEADEGFGNLMGGSSLQVGQEVSVRVL-RISR 324

Query: 539 GREIVSVKK 565
G+ +++KK
Sbjct: 325 GQVTLTMKK 333


>tr|A6E805|A6E805_9SPHI Polynucleotide phosphorylase/polyadenylase
OS=Pedobacter sp. BAL39 GN=PBAL39_00932 PE=4 SV=1
Length = 715

Score = 37.0 bits (84), Expect = 0.77
Identities = 17/50 (34%), Positives = 31/50 (62%)
Frame = +2

Query: 374 IKDVMPVGYFVSLPTGRDGYLPADDLGFTGGLAILRKLFKEGQEITVRIV 523
+K +MP G FV + G+DG L ++ +T L + +FKEG ++ V+++
Sbjct: 636 VKSIMPFGAFVEIMPGKDGLLHISEIDWT-RLETMDGVFKEGDKLQVKLL 684


>tr|B8PN02|B8PN02_9APHY Predicted protein OS=Postia placenta
Mad-698-R GN=POSPLDRAFT_104026 PE=4 SV=1
Length = 355

Score = 37.0 bits (84), Expect = 0.78
Identities = 26/67 (38%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Frame = -1

Query: 195 DDEAPEVERHKGSSELGIARRLAN---RGEEDQRRRDDWRTERLAQERASMALLLISTAA 25
++EA VE ++ RRL + R EE++RR +D ER AQE A L I+ A
Sbjct: 101 EEEARRVEEAAKRAKAAEERRLEDERRRKEEEERRLED---ERRAQEAADEELARITAAE 157

Query: 24 GLISTPS 4
GL+S P+
Sbjct: 158 GLLSDPA 164


>tr|B8P3D7|B8P3D7_9APHY Predicted protein OS=Postia placenta Mad-698-R
GN=POSPLDRAFT_97308 PE=4 SV=1
Length = 1213

Score = 37.0 bits (84), Expect = 0.78
Identities = 26/67 (38%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Frame = -1

Query: 195 DDEAPEVERHKGSSELGIARRLAN---RGEEDQRRRDDWRTERLAQERASMALLLISTAA 25
++EA VE ++ RRL + R EE++RR +D ER AQE A L I+ A
Sbjct: 931 EEEARRVEEAAKRAKAAEERRLEDERRRKEEEERRLED---ERRAQEAADEELARIAAAE 987

Query: 24 GLISTPS 4
GL+S P+
Sbjct: 988 GLLSDPA 994


>tr|B3QSU3|B3QSU3_CHLT3 Ribosomal protein S1 OS=Chloroherpeton
thalassium (strain ATCC 35110 / GB-78) GN=Ctha_0115 PE=4
SV=1
Length = 616

Score = 36.6 bits (83), Expect = 1.00
Identities = 17/50 (34%), Positives = 29/50 (58%)
Frame = +2

Query: 374 IKDVMPVGYFVSLPTGRDGYLPADDLGFTGGLAILRKLFKEGQEITVRIV 523
I ++ G V LP+G DG++PA L GG+ + FK G E+ ++++
Sbjct: 486 IAQIIEKGVIVELPSGVDGFVPASHL-LQGGVRDINASFKVGDELPLKVI 534


>tr|A7I0M8|A7I0M8_CAMHC 30S ribosomal protein S1 OS=Campylobacter
hominis (strain ATCC BAA-381 / LMG 19568 / NCTC 13146 /
CH001A) GN=CHAB381_0481 PE=4 SV=1
Length = 557

Score = 36.6 bits (83), Expect = 1.00
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Frame = +2

Query: 338 LQPGDPNSMQAIIKDVMPVGYFVSLPTGRDGYLPADDLGFTGGLAILRKLFKEGQEITVR 517
L+ GD ++Q + ++ P G FV L +G+L ++ + + + EGQEI V
Sbjct: 284 LEVGD--TIQVTVSNIEPYGAFVDLGNDIEGFLHISEISWDKNIKNPKDFISEGQEINVE 341

Query: 518 IVCRGGAGREI-VSVK 562
+V G R + VS+K
Sbjct: 342 VVEINGDDRRLRVSLK 357


>tr|B8PMW1|B8PMW1_9APHY Predicted protein OS=Postia placenta
Mad-698-R GN=POSPLDRAFT_96931 PE=4 SV=1
Length = 332

Score = 36.6 bits (83), Expect = 1.0
Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Frame = -1

Query: 195 DDEAPEVERHKGSSELGIARRLAN---RGEEDQRRRDDWRTERLAQERASMALLLISTAA 25
++EA +E ++ RRL + R EE++RR +D ER AQE A L I+ A
Sbjct: 98 EEEARRIEEAAKRAKAAEERRLEDERRRKEEEERRLED---ERRAQEAADEELARIAAAE 154

Query: 24 GLISTPS 4
GL+S P+
Sbjct: 155 GLLSDPA 161


>tr|B8PM62|B8PM62_9APHY Predicted protein OS=Postia placenta
Mad-698-R GN=POSPLDRAFT_98462 PE=4 SV=1
Length = 249

Score = 36.6 bits (83), Expect = 1.0
Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Frame = -1

Query: 195 DDEAPEVERHKGSSELGIARRLAN---RGEEDQRRRDDWRTERLAQERASMALLLISTAA 25
++EA +E ++ RRL + R EE++RR +D ER AQE A L I+ A
Sbjct: 115 EEEARRIEEAAKRAKAAEERRLEDERRRKEEEERRLED---ERRAQEAADEELARIAAAE 171

Query: 24 GLISTPS 4
GL+S P+
Sbjct: 172 GLLSDPA 178


>tr|B8PIT6|B8PIT6_9APHY Predicted protein OS=Postia placenta
Mad-698-R GN=POSPLDRAFT_97913 PE=4 SV=1
Length = 362

Score = 36.6 bits (83), Expect = 1.0
Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Frame = -1

Query: 195 DDEAPEVERHKGSSELGIARRLAN---RGEEDQRRRDDWRTERLAQERASMALLLISTAA 25
++EA +E ++ RRL + R EE++RR +D ER AQE A L I+ A
Sbjct: 108 EEEARRIEEAAKRAKAAEERRLEDERRRKEEEERRLED---ERRAQEAADEELARIAAAE 164

Query: 24 GLISTPS 4
GL+S P+
Sbjct: 165 GLLSDPA 171


>tr|B8P8M1|B8P8M1_9APHY Predicted protein OS=Postia placenta
Mad-698-R GN=POSPLDRAFT_106563 PE=4 SV=1
Length = 374

Score = 36.6 bits (83), Expect = 1.0
Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Frame = -1

Query: 195 DDEAPEVERHKGSSELGIARRLAN---RGEEDQRRRDDWRTERLAQERASMALLLISTAA 25
++EA +E ++ RRL + R EE++RR +D ER AQE A L I+ A
Sbjct: 107 EEEARRIEEAAKRAKAAEERRLEDERRRKEEEERRLED---ERRAQEAADEELAQIAAAE 163

Query: 24 GLISTPS 4
GL+S P+
Sbjct: 164 GLLSDPA 170