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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK954806
Clone id TST39A01NGRL0021_G20
Library
Length 395
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0021_G20. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
TGCAAGTGTGGTAAGAAGGTGTTTGACGAAACTGCCCTCGATGCCCCGAGGGAAGTGACG
GTTGCTGGCTGTGCGTGCAAGTGTGGATCTAACTGCCAGTGCGCCGACCCCTGTCCCTGT
GCGCAAACCTCGAGCGGGGATGCTTGCAAGTGCGGTGCGAACTGTACCTGCAATCCCTGC
AACTGCTGATTATGATCATGATTAGTACTAACTTGCGCCATGTAGAAATTACCCTGTTGA
AAGATGCGATGCACGCATAGGCAAGCATGATGGTATGGCTGTCTGCTCGCCACTTGCTCC
ATCTTCATGTATCTTAGAAAGATAAATTTCACTTTTTGCTGGTATATCTTTACCATGTCT
CATCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id O24528
Definition sp|O24528|MT1_FESRU Metallothionein-like protein 1 OS=Festuca rubra
Align length 57
Score (bit) 40.0
E-value 0.004
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK954806|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0021_G20, 5'
         (365 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O24528|MT1_FESRU Metallothionein-like protein 1 OS=Festuca ru...    40   0.004
sp|Q43515|MT2Z_SOLLC Metallothionein-like protein type 2 OS=Sola...    36   0.052
sp|Q43512|MT2X_SOLLC Metallothionein-like protein type 2 OS=Sola...    36   0.069
sp|Q40157|MT2A_SOLLC Metallothionein-like protein type 2 A OS=So...    36   0.069
sp|P43399|MT1_TRIRP Metallothionein-like protein 1 OS=Trifolium ...    36   0.069
sp|Q41670|MT1B_VICFA Metallothionein-like protein 1B OS=Vicia fa...    36   0.069
sp|P43402|MT54_BRANA Metallothionein-like protein LSC54 OS=Brass...    35   0.089
sp|Q43513|MT2Y_SOLLC Metallothionein-like protein type 2 OS=Sola...    35   0.089
sp|P20830|MT1_PEA Metallothionein-like protein 1 OS=Pisum sativu...    35   0.12 
sp|Q41669|MT1A_VICFA Metallothionein-like protein 1A OS=Vicia fa...    35   0.12 
sp|P55946|MT_ARIAR Metallothionein OS=Arianta arbustorum PE=1 SV=1     35   0.15 
sp|P20238|MT1_MIMGU Metallothionein-like protein 1 OS=Mimulus gu...    35   0.15 
sp|Q94550|MT_DREPO Metallothionein OS=Dreissena polymorpha PE=1 ...    34   0.20 
sp|P33187|MTCD_HELPO Cadmium-metallothionein OS=Helix pomatia PE...    34   0.20 
sp|Q54J58|Y7870_DICDI Uncharacterized protein DDB_G0288281 OS=Di...    34   0.26 
sp|Q40410|MT2_NICPL Metallothionein-like protein type 2 OS=Nicot...    34   0.26 
sp|P69164|MT2_BRARA Metallothionein-like protein type 2 OS=Brass...    34   0.26 
sp|P69163|MT22_BRAJU Metallothionein-like protein type 2, MT2-18...    34   0.26 
sp|Q38804|MT1C_ARATH Metallothionein-like protein 1C OS=Arabidop...    34   0.26 
sp|P25860|MT2A_ARATH Metallothionein-like protein 2A OS=Arabidop...    33   0.34 
sp|P30571|MT1_MAIZE Metallothionein-like protein 1 OS=Zea mays P...    33   0.34 
sp|O22319|MT2_MUSAC Metallothionein-like protein type 2 OS=Musa ...    33   0.44 
sp|P23038|MT_CRAVI Metallothionein OS=Crassostrea virginica PE=1...    33   0.58 
sp|Q40158|MT2B_SOLLC Metallothionein-like protein type 2 B OS=So...    33   0.58 
sp|Q39511|MT1_CASGL Metallothionein-like protein 1 OS=Casuarina ...    32   0.76 
sp|P43398|MT2_TRIRP Metallothionein-like protein 2 OS=Trifolium ...    32   0.99 
sp|Q39269|MT2_BRARP Metallothionein-like protein BIF98 OS=Brassi...    32   0.99 
sp|P43390|MT2_ACTDE Metallothionein-like protein type 2 OS=Actin...    32   0.99 
sp|Q39458|MT1_CICAR Metallothionein-like protein 1 OS=Cicer arie...    32   0.99 
sp|P37359|MT3_BOVIN Metallothionein-3 OS=Bos taurus GN=MT3 PE=1 ...    32   1.3  

>sp|O24528|MT1_FESRU Metallothionein-like protein 1 OS=Festuca rubra
           GN=MT1 PE=3 SV=1
          Length = 70

 Score = 40.0 bits (92), Expect = 0.004
 Identities = 23/57 (40%), Positives = 26/57 (45%), Gaps = 17/57 (29%)
 Frame = +1

Query: 1   CKCGKKV--FDETALDAPREVTVAGCA---------------CKCGSNCQCADPCPC 120
           CKCGK     DE A    + V V G A               CKCG+NC+C DPC C
Sbjct: 15  CKCGKMYPDLDEQASTTTQAVVVVGVAHENKAGQFEMASGEGCKCGANCKC-DPCNC 70


>sp|Q43515|MT2Z_SOLLC Metallothionein-like protein type 2 OS=Solanum
           lycopersicum PE=3 SV=1
          Length = 84

 Score = 36.2 bits (82), Expect = 0.052
 Identities = 14/28 (50%), Positives = 18/28 (64%)
 Frame = +1

Query: 52  EVTVAGCACKCGSNCQCADPCPCAQTSS 135
           + T  G  CKCGS+C+C DPC C   S+
Sbjct: 55  KATEGGNGCKCGSSCKC-DPCNCCSAST 81


>sp|Q43512|MT2X_SOLLC Metallothionein-like protein type 2 OS=Solanum
           lycopersicum PE=3 SV=1
          Length = 72

 Score = 35.8 bits (81), Expect = 0.069
 Identities = 15/23 (65%), Positives = 15/23 (65%)
 Frame = +1

Query: 52  EVTVAGCACKCGSNCQCADPCPC 120
           E   AG  CKCGSNC C DPC C
Sbjct: 51  EEKAAGEGCKCGSNCTC-DPCNC 72


>sp|Q40157|MT2A_SOLLC Metallothionein-like protein type 2 A
           OS=Solanum lycopersicum GN=MTA PE=2 SV=1
          Length = 72

 Score = 35.8 bits (81), Expect = 0.069
 Identities = 15/23 (65%), Positives = 15/23 (65%)
 Frame = +1

Query: 52  EVTVAGCACKCGSNCQCADPCPC 120
           E   AG  CKCGSNC C DPC C
Sbjct: 51  EEKAAGEGCKCGSNCTC-DPCNC 72


>sp|P43399|MT1_TRIRP Metallothionein-like protein 1 OS=Trifolium
           repens GN=MT1B PE=3 SV=1
          Length = 75

 Score = 35.8 bits (81), Expect = 0.069
 Identities = 12/21 (57%), Positives = 14/21 (66%)
 Frame = +1

Query: 76  CKCGSNCQCADPCPCAQTSSG 138
           C CGS+C C D C C + SSG
Sbjct: 4   CNCGSSCNCGDSCKCNKRSSG 24



 Score = 33.5 bits (75), Expect = 0.34
 Identities = 14/27 (51%), Positives = 15/27 (55%)
 Frame = +1

Query: 40  DAPREVTVAGCACKCGSNCQCADPCPC 120
           DA   V      CKCGS+C C DPC C
Sbjct: 49  DAEMGVAAEDSGCKCGSSCTC-DPCNC 74


>sp|Q41670|MT1B_VICFA Metallothionein-like protein 1B OS=Vicia faba
           GN=MT1B PE=3 SV=1
          Length = 75

 Score = 35.8 bits (81), Expect = 0.069
 Identities = 12/21 (57%), Positives = 14/21 (66%)
 Frame = +1

Query: 76  CKCGSNCQCADPCPCAQTSSG 138
           C CGS+C C D C C + SSG
Sbjct: 4   CNCGSSCNCGDSCKCNKRSSG 24



 Score = 31.2 bits (69), Expect = 1.7
 Identities = 11/15 (73%), Positives = 11/15 (73%)
 Frame = +1

Query: 76  CKCGSNCQCADPCPC 120
           CKCG NC C DPC C
Sbjct: 61  CKCGDNCTC-DPCNC 74


>sp|P43402|MT54_BRANA Metallothionein-like protein LSC54 OS=Brassica
           napus PE=2 SV=1
          Length = 45

 Score = 35.4 bits (80), Expect = 0.089
 Identities = 15/40 (37%), Positives = 18/40 (45%)
 Frame = +1

Query: 1   CKCGKKVFDETALDAPREVTVAGCACKCGSNCQCADPCPC 120
           CKCG     E   +   +      +C CGSNC C D C C
Sbjct: 12  CKCGDSCSCEKNYNTECD------SCSCGSNCSCGDSCSC 45



 Score = 33.9 bits (76), Expect = 0.26
 Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
 Frame = +1

Query: 61  VAGCACKCGSNCQCADPCPCAQ--TSSGDAC 147
           +AG  C CGS C+C D C C +   +  D+C
Sbjct: 1   MAGSNCGCGSGCKCGDSCSCEKNYNTECDSC 31


>sp|Q43513|MT2Y_SOLLC Metallothionein-like protein type 2 OS=Solanum
           lycopersicum PE=3 SV=1
          Length = 73

 Score = 35.4 bits (80), Expect = 0.089
 Identities = 14/23 (60%), Positives = 15/23 (65%)
 Frame = +1

Query: 52  EVTVAGCACKCGSNCQCADPCPC 120
           + T  G  CKCGSNC C DPC C
Sbjct: 52  KATEGGNGCKCGSNCTC-DPCNC 73


>sp|P20830|MT1_PEA Metallothionein-like protein 1 OS=Pisum sativum
           GN=MTA PE=3 SV=1
          Length = 75

 Score = 35.0 bits (79), Expect = 0.12
 Identities = 12/21 (57%), Positives = 14/21 (66%)
 Frame = +1

Query: 76  CKCGSNCQCADPCPCAQTSSG 138
           C CGS+C C D C C + SSG
Sbjct: 4   CGCGSSCNCGDSCKCNKRSSG 24



 Score = 31.2 bits (69), Expect = 1.7
 Identities = 11/15 (73%), Positives = 11/15 (73%)
 Frame = +1

Query: 76  CKCGSNCQCADPCPC 120
           CKCG NC C DPC C
Sbjct: 61  CKCGDNCTC-DPCNC 74


>sp|Q41669|MT1A_VICFA Metallothionein-like protein 1A OS=Vicia faba
           GN=MT1A PE=3 SV=1
          Length = 77

 Score = 35.0 bits (79), Expect = 0.12
 Identities = 12/21 (57%), Positives = 14/21 (66%)
 Frame = +1

Query: 76  CKCGSNCQCADPCPCAQTSSG 138
           C CGS+C C D C C + SSG
Sbjct: 4   CGCGSSCNCGDSCKCNKRSSG 24



 Score = 28.9 bits (63), Expect = 8.4
 Identities = 10/15 (66%), Positives = 10/15 (66%)
 Frame = +1

Query: 76  CKCGSNCQCADPCPC 120
           CKCG  C C DPC C
Sbjct: 64  CKCGDKCTC-DPCNC 77
tr_hit_id A8QMV1
Definition tr|A8QMV1|A8QMV1_AEQIR Metallothionein OS=Aequipecten irradians
Align length 49
Score (bit) 47.8
E-value 0.0003
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK954806|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0021_G20, 5'
         (365 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A8QMV1|A8QMV1_AEQIR Metallothionein OS=Aequipecten irradians ...    48   3e-04
tr|Q8S3M2|Q8S3M2_AZOFI Metallothionein-like protein 2 OS=Azolla ...    47   4e-04
tr|B3VKV7|B3VKV7_SOLNI Type 2 metallothionein OS=Solanum nigrum ...    40   0.076
tr|B3VKV6|B3VKV6_SOLNI Type 2 metallothionein OS=Solanum nigrum ...    39   0.099
tr|Q75NI4|Q75NI4_PHAAU Type 1 metallothionein OS=Phaseolus aureu...    33   0.11 
tr|Q6PML5|Q6PML5_POPJC Metallothionein 1b (Putative uncharacteri...    33   0.14 
tr|B3VKV5|B3VKV5_SOLNI Type 2 metallothionein OS=Solanum nigrum ...    39   0.17 
tr|B5U0R0|B5U0R0_ANABR Metallothionein OS=Anadara broughtonii PE...    39   0.17 
tr|A1Z0P1|A1Z0P1_9ROSI Metallothionein-like protein MT1A OS=Sali...    33   0.18 
tr|Q2QKE5|Q2QKE5_CATRO Metallothionein OS=Catharanthus roseus PE...    38   0.29 
tr|Q508T1|Q508T1_9ROSI Metallothionein-like protein OS=Betula pl...    37   0.38 
tr|Q9ZSC6|Q9ZSC6_IPOBA Metallothionein-like type 1 protein OS=Ip...    37   0.49 
tr|Q4ZGB4|Q4ZGB4_IPOBA Metallothionein-like type 1 protein OS=Ip...    37   0.49 
tr|B8LFH0|B8LFH0_IPOBA Metallothionein-like protein OS=Ipomoea b...    37   0.49 
tr|Q2VT53|Q2VT53_CAPAN Metallothionein-like protein type 2 OS=Ca...    37   0.64 
tr|Q84SA5|Q84SA5_ASTTR Metallothionein 1 OS=Aster tripolium PE=4...    36   0.84 
tr|O22492|O22492_OENJA Metallothionein-1 like protein OS=Oenanth...    36   0.84 
tr|Q94I87|Q94I87_ATRBE Putative metallothionein-like protein typ...    36   1.1  
tr|Q564N1|Q564N1_IPOBA Metallothionein-like type 2 protein OS=Ip...    36   1.1  
tr|Q4ZGB3|Q4ZGB3_IPOBA Metallothionein-like type 2 protein OS=Ip...    36   1.1  
tr|Q20BM7|Q20BM7_PANGI Metallothionein-like protein OS=Panax gin...    36   1.1  
tr|B6ECQ7|B6ECQ7_HEVBR Metallothionein-like protein OS=Hevea bra...    36   1.1  
tr|A8DUB1|A8DUB1_SOLLC Metallothionein-like protein OS=Solanum l...    36   1.1  
tr|Q71M48|Q71M48_BRAOL Metallothionein-like protein OS=Brassica ...    35   1.4  
tr|A9YTZ3|A9YTZ3_SOLTU Metallothionein-like protein OS=Solanum t...    35   1.4  
tr|A7NZ11|A7NZ11_VITVI Chromosome chr6 scaffold_3, whole genome ...    35   1.4  
tr|Q9SP23|Q9SP23_MEDSA Type 1 metallothionein OS=Medicago sativa...    35   1.9  
tr|Q9M698|Q9M698_BRAOL Metallothionein-like protein 1 OS=Brassic...    35   1.9  
tr|Q9FSF3|Q9FSF3_TOBAC Metallothionein-like protein type 2 (Frag...    35   1.9  
tr|Q75NH8|Q75NH8_VICFA Type 1 metallothionein OS=Vicia faba GN=M...    35   1.9  

>tr|A8QMV1|A8QMV1_AEQIR Metallothionein OS=Aequipecten irradians
           PE=2 SV=1
          Length = 145

 Score = 47.8 bits (112), Expect = 3e-04
 Identities = 19/49 (38%), Positives = 24/49 (48%)
 Frame = +1

Query: 1   CKCGKKVFDETALDAPREVTVAGCACKCGSNCQCADPCPCAQTSSGDAC 147
           CK     F   +   P  V   G ACKCG +C+C+D CPC    +G  C
Sbjct: 33  CKVNCACFSAKSSTCPDGVCQMGVACKCGGSCKCSDSCPCPNCKAGCKC 81


>tr|Q8S3M2|Q8S3M2_AZOFI Metallothionein-like protein 2 OS=Azolla
           filiculoides GN=AzMT2 PE=4 SV=1
          Length = 77

 Score = 47.4 bits (111), Expect = 4e-04
 Identities = 26/65 (40%), Positives = 30/65 (46%), Gaps = 25/65 (38%)
 Frame = +1

Query: 1   CKCGKKVFDETALDAPREVTV-------AGC------------------ACKCGSNCQCA 105
           C+CGK+ FDETA DAP EV V       + C                   C CGSNC C 
Sbjct: 14  CRCGKRSFDETAFDAPMEVEVTVFGNEGSNCGFDSSCGFESDAQATSQNGCSCGSNCTC- 72

Query: 106 DPCPC 120
           +PC C
Sbjct: 73  NPCRC 77


>tr|B3VKV7|B3VKV7_SOLNI Type 2 metallothionein OS=Solanum nigrum
           GN=MT2e PE=4 SV=1
          Length = 77

 Score = 39.7 bits (91), Expect = 0.076
 Identities = 15/25 (60%), Positives = 17/25 (68%)
 Frame = +1

Query: 46  PREVTVAGCACKCGSNCQCADPCPC 120
           P+  T  G  CKCGSNC+C DPC C
Sbjct: 54  PKNATEGGNGCKCGSNCKC-DPCTC 77


>tr|B3VKV6|B3VKV6_SOLNI Type 2 metallothionein OS=Solanum nigrum
           GN=MT2d PE=4 SV=1
          Length = 77

 Score = 39.3 bits (90), Expect = 0.099
 Identities = 15/25 (60%), Positives = 17/25 (68%)
 Frame = +1

Query: 46  PREVTVAGCACKCGSNCQCADPCPC 120
           P+  T  G  CKCGSNC+C DPC C
Sbjct: 54  PKNATEGGNGCKCGSNCKC-DPCNC 77


>tr|Q75NI4|Q75NI4_PHAAU Type 1 metallothionein OS=Phaseolus aureus
           GN=MET PE=4 SV=1
          Length = 73

 Score = 32.7 bits (73), Expect(2) = 0.11
 Identities = 12/15 (80%), Positives = 12/15 (80%)
 Frame = +1

Query: 76  CKCGSNCQCADPCPC 120
           CKCGSNC C DPC C
Sbjct: 59  CKCGSNCTC-DPCNC 72



 Score = 26.9 bits (58), Expect(2) = 0.11
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +1

Query: 67  GCACKCGSNCQC 102
           G +C CGSNC C
Sbjct: 7   GSSCNCGSNCSC 18


>tr|Q6PML5|Q6PML5_POPJC Metallothionein 1b (Putative uncharacterized
           protein) OS=Populus jackii GN=MT1b PE=4 SV=1
          Length = 73

 Score = 33.1 bits (74), Expect(2) = 0.14
 Identities = 12/15 (80%), Positives = 12/15 (80%)
 Frame = +1

Query: 76  CKCGSNCQCADPCPC 120
           CKCGSNC C DPC C
Sbjct: 59  CKCGSNCTC-DPCTC 72



 Score = 26.2 bits (56), Expect(2) = 0.14
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = +1

Query: 67  GCACKCGSNCQC 102
           G  CKCGS+C+C
Sbjct: 7   GSDCKCGSDCKC 18


>tr|B3VKV5|B3VKV5_SOLNI Type 2 metallothionein OS=Solanum nigrum
           GN=MT2c PE=4 SV=1
          Length = 77

 Score = 38.5 bits (88), Expect = 0.17
 Identities = 15/25 (60%), Positives = 16/25 (64%)
 Frame = +1

Query: 46  PREVTVAGCACKCGSNCQCADPCPC 120
           P+  T  G  CKCGSNC C DPC C
Sbjct: 54  PKNATEGGNGCKCGSNCTC-DPCNC 77


>tr|B5U0R0|B5U0R0_ANABR Metallothionein OS=Anadara broughtonii PE=4
           SV=1
          Length = 75

 Score = 38.5 bits (88), Expect = 0.17
 Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
 Frame = +1

Query: 1   CKCGKK-VFDETALDAPREVTVAGCACK-CGSNCQCADPCPCAQTSSGDA-CK 150
           CKC +    D    D  +    AGC C  CG  C+C+  C C Q  +G A CK
Sbjct: 13  CKCDESCASDNCRCDPAKCKCKAGCKCSGCGVKCKCSGTCDCGQNCTGPADCK 65


>tr|A1Z0P1|A1Z0P1_9ROSI Metallothionein-like protein MT1A OS=Salix
           matsudana PE=4 SV=1
          Length = 73

 Score = 33.1 bits (74), Expect(2) = 0.18
 Identities = 12/15 (80%), Positives = 12/15 (80%)
 Frame = +1

Query: 76  CKCGSNCQCADPCPC 120
           CKCGSNC C DPC C
Sbjct: 59  CKCGSNCTC-DPCTC 72



 Score = 25.8 bits (55), Expect(2) = 0.18
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = +1

Query: 67  GCACKCGSNCQC 102
           G  CKCGS+C+C
Sbjct: 7   GFDCKCGSDCKC 18


>tr|Q2QKE5|Q2QKE5_CATRO Metallothionein OS=Catharanthus roseus PE=4
           SV=1
          Length = 73

 Score = 37.7 bits (86), Expect = 0.29
 Identities = 19/60 (31%), Positives = 23/60 (38%), Gaps = 20/60 (33%)
 Frame = +1

Query: 1   CKCGKKVFDETALDAPREVTVAGCA--------------------CKCGSNCQCADPCPC 120
           C CG K + +    A   + + G A                    CKCGSNC C DPC C
Sbjct: 15  CSCGSKKYQDLETSATTTIIIEGVAPKKMDFEESEKSFGAEGGHGCKCGSNCNC-DPCNC 73