DK954807 |
Clone id |
TST39A01NGRL0021_G21 |
Library |
TST39 |
Length |
538 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0021_G21. 5' end sequence. |
Accession |
DK954807 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL537Contig1 |
Sequence |
GAGAGACAGAGAGGGAGCGCGCGCACCAGAAGAGGCGCAAGCAGGGCGCCTTCCATTGCA CCAGATCTCGTCTGTCAAGGAAAAATGGCGGATGGTGATGAAGTCCAACCTCTTGTTTGT GACAATGGATCTGGTATGGTGAAGGCTGGGTTTGCCGGTGATGATGCTCCCCGGGCTGTC TTTCCTAGCATTGTGGGTCGTCCGCGACACACAGGGGTCATGGTGGGTATGGGCCAAAAA GATGCATATGTAGGTGATGAAGCTCAATCGAAACGTGGTATACTCACCTTGAAATATCCC ATTGAGCATGGGATTGTTACAAATTGGGACGATATGGAAAAGATATGGCACCATACATTT TACAATGAGCTTCGTGTTGCACCAGAGGAGCACCCAGTCCTGCTCACCGAAGCCCCATTA AATCCCAAAGCCAATCGTGAGAAGATGACCCAAATCATGTTTGACACATTCAATGCTCCA GCTATGTATGTTGCCATTCAGGCTGTACTTTCTCTTTATGCAAGTGGAAGGACCACAG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
O81221 |
Definition |
sp|O81221|ACT_GOSHI Actin OS=Gossypium hirsutum |
Align length |
151 |
Score (bit) |
305.0 |
E-value |
9.0e-83 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9TYG3 |
Definition |
tr|A9TYG3|A9TYG3_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
151 |
Score (bit) |
308.0 |
E-value |
2.0e-82 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK954807|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0021_G21, 5' (538 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9TYG3|A9TYG3_PHYPA Predicted protein OS=Physcomitrella paten... 308 2e-82 tr|O82564|O82564_ANEPH Actin 2 OS=Anemia phyllitidis PE=2 SV=1 307 2e-82 tr|Q6TYS2|Q6TYS2_PHYPA Actin 1 OS=Physcomitrella patens GN=Act1 ... 306 3e-82 tr|A9TVP1|A9TVP1_PHYPA Predicted protein OS=Physcomitrella paten... 306 3e-82 tr|A9TVP0|A9TVP0_PHYPA Predicted protein OS=Physcomitrella paten... 306 3e-82 tr|B4FVB1|B4FVB1_MAIZE Putative uncharacterized protein OS=Zea m... 305 1e-81 tr|Q9M4Y2|Q9M4Y2_9ASPA Actin-like protein OS=Phalaenopsis hybrid... 305 1e-81 tr|Q8H1Y3|Q8H1Y3_9ASPA Actin OS=Phalaenopsis hybrid cultivar GN=... 305 1e-81 tr|B8AMT7|B8AMT7_ORYSI Putative uncharacterized protein OS=Oryza... 305 1e-81 tr|B7E8U0|B7E8U0_ORYSJ cDNA clone:001-118-B07, full insert seque... 305 1e-81 tr|Q2QLI5|Q2QLI5_ORYSJ Os12g0641000 protein OS=Oryza sativa subs... 304 2e-81 tr|B8AWW7|B8AWW7_ORYSI Putative uncharacterized protein OS=Oryza... 304 2e-81 tr|A8W4W6|A8W4W6_9FABA Actin OS=Glycyrrhiza uralensis PE=2 SV=1 304 2e-81 tr|A5BXV1|A5BXV1_VITVI Chromosome chr13 scaffold_17, whole genom... 304 2e-81 tr|A3AZ49|A3AZ49_ORYSJ Putative uncharacterized protein OS=Oryza... 304 2e-81 tr|A2ZN74|A2ZN74_ORYSI Putative uncharacterized protein OS=Oryza... 304 2e-81 tr|Q9FUS4|Q9FUS4_SETIT Actin OS=Setaria italica PE=2 SV=1 304 2e-81 tr|Q94G12|Q94G12_MUSPR Actin OS=Musa ABB Group GN=ACT1 PE=3 SV=1 304 2e-81 tr|Q94DL4|Q94DL4_ORYSJ cDNA, clone: J100088I07, full insert sequ... 304 2e-81 tr|Q947D0|Q947D0_TRIMO Actin (Fragment) OS=Triticum monococcum G... 304 2e-81 tr|Q8H1L9|Q8H1L9_HORVU Actin OS=Hordeum vulgare PE=2 SV=1 304 2e-81 tr|Q7XZK0|Q7XZK0_GOSHI Actin OS=Gossypium hirsutum GN=ACT2 PE=2 ... 304 2e-81 tr|Q7XZJ3|Q7XZJ3_GOSHI Actin OS=Gossypium hirsutum GN=ACT10 PE=2... 304 2e-81 tr|Q7XZJ1|Q7XZJ1_GOSHI Actin OS=Gossypium hirsutum GN=ACT14 PE=2... 304 2e-81 tr|Q6PZE5|Q6PZE5_BRANA Actin (Fragment) OS=Brassica napus var. n... 304 2e-81 tr|Q6F4H4|Q6F4H4_TOBAC Actin OS=Nicotiana tabacum PE=2 SV=1 304 2e-81 tr|Q67G20|Q67G20_ORYSJ Actin-7, putative, expressed OS=Oryza sat... 304 2e-81 tr|Q65XH8|Q65XH8_ORYSJ Os05g0106600 protein OS=Oryza sativa subs... 304 2e-81 tr|Q5XPX5|Q5XPX5_SACOF Actin OS=Saccharum officinarum PE=2 SV=1 304 2e-81 tr|Q5EWZ5|Q5EWZ5_TRITU Actin OS=Triticum turgidum GN=ACT-1 PE=3 ... 304 2e-81
>tr|A9TYG3|A9TYG3_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_226658 PE=3 SV=1 Length = 377
Score = 308 bits (788), Expect = 2e-82 Identities = 147/151 (97%), Positives = 150/151 (99%) Frame = +1
Query: 85 MADGDEVQPLVCDNGSGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 264 MADG+EVQPLVCDNGSGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA Sbjct: 1 MADGEEVQPLVCDNGSGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
Query: 265 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 444 QSKRGILTLKYPIEHG+VTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK Sbjct: 61 QSKRGILTLKYPIEHGVVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
Query: 445 MTQIMFDTFNAPAMYVAIQAVLSLYASGRTT 537 MTQIMF+TFN PAMYVAIQAVLSLYASGRTT Sbjct: 121 MTQIMFETFNVPAMYVAIQAVLSLYASGRTT 151
>tr|O82564|O82564_ANEPH Actin 2 OS=Anemia phyllitidis PE=2 SV=1 Length = 377
Score = 307 bits (787), Expect = 2e-82 Identities = 148/151 (98%), Positives = 149/151 (98%) Frame = +1
Query: 85 MADGDEVQPLVCDNGSGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 264 M D +EVQPLVCDNGSGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA Sbjct: 1 MGDAEEVQPLVCDNGSGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
Query: 265 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 444 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK Sbjct: 61 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
Query: 445 MTQIMFDTFNAPAMYVAIQAVLSLYASGRTT 537 MTQIMFDTFNAPAMYVAIQAVLSLYASGRTT Sbjct: 121 MTQIMFDTFNAPAMYVAIQAVLSLYASGRTT 151
>tr|Q6TYS2|Q6TYS2_PHYPA Actin 1 OS=Physcomitrella patens GN=Act1 PE=3 SV=1 Length = 377
Score = 306 bits (785), Expect = 3e-82 Identities = 146/151 (96%), Positives = 150/151 (99%) Frame = +1
Query: 85 MADGDEVQPLVCDNGSGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 264 MADG+EVQPLVCDNG+GMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA Sbjct: 1 MADGEEVQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
Query: 265 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 444 QSKRGILTLKYPIEHG+VTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK Sbjct: 61 QSKRGILTLKYPIEHGVVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
Query: 445 MTQIMFDTFNAPAMYVAIQAVLSLYASGRTT 537 MTQIMF+TFN PAMYVAIQAVLSLYASGRTT Sbjct: 121 MTQIMFETFNVPAMYVAIQAVLSLYASGRTT 151
>tr|A9TVP1|A9TVP1_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_225906 PE=3 SV=1 Length = 377
Score = 306 bits (785), Expect = 3e-82 Identities = 146/151 (96%), Positives = 150/151 (99%) Frame = +1
Query: 85 MADGDEVQPLVCDNGSGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 264 MADG++VQPLVCDNGSGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA Sbjct: 1 MADGEDVQPLVCDNGSGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
Query: 265 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 444 QSKRGILTLKYPIEHG+VTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK Sbjct: 61 QSKRGILTLKYPIEHGVVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
Query: 445 MTQIMFDTFNAPAMYVAIQAVLSLYASGRTT 537 MTQIMF+TFN PAMYVAIQAVLSLYASGRTT Sbjct: 121 MTQIMFETFNVPAMYVAIQAVLSLYASGRTT 151
>tr|A9TVP0|A9TVP0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_198730 PE=3 SV=1 Length = 377
Score = 306 bits (785), Expect = 3e-82 Identities = 146/151 (96%), Positives = 150/151 (99%) Frame = +1
Query: 85 MADGDEVQPLVCDNGSGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 264 MADG+EVQPLVCDNG+GMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA Sbjct: 1 MADGEEVQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
Query: 265 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 444 QSKRGILTLKYPIEHG+VTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK Sbjct: 61 QSKRGILTLKYPIEHGVVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
Query: 445 MTQIMFDTFNAPAMYVAIQAVLSLYASGRTT 537 MTQIMF+TFN PAMYVAIQAVLSLYASGRTT Sbjct: 121 MTQIMFETFNVPAMYVAIQAVLSLYASGRTT 151
>tr|B4FVB1|B4FVB1_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 377
Score = 305 bits (781), Expect = 1e-81 Identities = 145/151 (96%), Positives = 150/151 (99%) Frame = +1
Query: 85 MADGDEVQPLVCDNGSGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 264 MADG+++QPLVCDNG+GMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA Sbjct: 1 MADGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
Query: 265 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 444 QSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK Sbjct: 61 QSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
Query: 445 MTQIMFDTFNAPAMYVAIQAVLSLYASGRTT 537 MTQIMF+TFNAPAMYVAIQAVLSLYASGRTT Sbjct: 121 MTQIMFETFNAPAMYVAIQAVLSLYASGRTT 151
>tr|Q9M4Y2|Q9M4Y2_9ASPA Actin-like protein OS=Phalaenopsis hybrid cultivar GN=ACT1 PE=2 SV=1 Length = 377
Score = 305 bits (780), Expect = 1e-81 Identities = 144/151 (95%), Positives = 151/151 (100%) Frame = +1
Query: 85 MADGDEVQPLVCDNGSGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 264 MA+G+E+QPLVCDNG+GMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA Sbjct: 1 MAEGEEIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
Query: 265 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 444 QSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREK Sbjct: 61 QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREK 120
Query: 445 MTQIMFDTFNAPAMYVAIQAVLSLYASGRTT 537 MTQIMF+TFNAPAMYVAIQAVLSLYASGRTT Sbjct: 121 MTQIMFETFNAPAMYVAIQAVLSLYASGRTT 151
>tr|Q8H1Y3|Q8H1Y3_9ASPA Actin OS=Phalaenopsis hybrid cultivar GN=PACT4 PE=2 SV=1 Length = 377
Score = 305 bits (780), Expect = 1e-81 Identities = 144/151 (95%), Positives = 151/151 (100%) Frame = +1
Query: 85 MADGDEVQPLVCDNGSGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 264 MA+G+E+QPLVCDNG+GMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA Sbjct: 1 MAEGEEIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
Query: 265 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 444 QSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREK Sbjct: 61 QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREK 120
Query: 445 MTQIMFDTFNAPAMYVAIQAVLSLYASGRTT 537 MTQIMF+TFNAPAMYVAIQAVLSLYASGRTT Sbjct: 121 MTQIMFETFNAPAMYVAIQAVLSLYASGRTT 151
>tr|B8AMT7|B8AMT7_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_14218 PE=4 SV=1 Length = 377
Score = 305 bits (780), Expect = 1e-81 Identities = 144/151 (95%), Positives = 150/151 (99%) Frame = +1
Query: 85 MADGDEVQPLVCDNGSGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 264 MADG+++QPLVCDNG+GMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA Sbjct: 1 MADGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
Query: 265 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 444 QSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREK Sbjct: 61 QSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREK 120
Query: 445 MTQIMFDTFNAPAMYVAIQAVLSLYASGRTT 537 MTQIMF+TFNAPAMYVAIQAVLSLYASGRTT Sbjct: 121 MTQIMFETFNAPAMYVAIQAVLSLYASGRTT 151
>tr|B7E8U0|B7E8U0_ORYSJ cDNA clone:001-118-B07, full insert sequence OS=Oryza sativa subsp. japonica PE=2 SV=1 Length = 377
Score = 305 bits (780), Expect = 1e-81 Identities = 144/151 (95%), Positives = 150/151 (99%) Frame = +1
Query: 85 MADGDEVQPLVCDNGSGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 264 MADG+++QPLVCDNG+GMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA Sbjct: 1 MADGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
Query: 265 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 444 QSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREK Sbjct: 61 QSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREK 120
Query: 445 MTQIMFDTFNAPAMYVAIQAVLSLYASGRTT 537 MTQIMF+TFNAPAMYVAIQAVLSLYASGRTT Sbjct: 121 MTQIMFETFNAPAMYVAIQAVLSLYASGRTT 151
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