DK954814
Clone id TST39A01NGRL0021_H04
Library
Length 637
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0021_H04. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence
GGAAATGGAAGAGGGCGAGGCAAGTCTAGATGTGAAGCTTACGCTCTCGCAGAAGCTCTT
TCTGATCCGCAGCCTCAACGTGCCGGACATTGAAAAGGTGCCGCTCAAGGAGGATGTCAT
GACTCTCATTCGCCAAGATGGCATGTCAGGACTTTATCAGAGTCTTTGCCATGAGCTTGG
ATGGGAACTGGACGAAAGTTTGCTGAATAGCATGCATTCTAGTTTTGAAGAGAAGGTTAA
AGCTTTTGATGAAAAGATAGTTGATGCTGAAGAAAATCTAGGAGAGAGTGAGGTCAGAGA
GGCACATCTAGCAAAGGCTTTATATTTCATACAGATTGGTGACAAGGAAAAAGCTCTGGA
GCAGCTGAAAATCACAGAAACTAAGACCGTTGCCGTCGGGCAACGTATGGATCTTGTGTT
CCACACGCTGAGGATTGGCTTCTTCTCAATGGATTACAAGCTGATTTCCACAAGCATTGA
TAAGGCTAAAAGCCTATTTGAAGAAGGTGGAGACTGGGAGAGGAAGAATAGACTGAAAGT
TTACGAAGGATTGTACTGCATGGCTACAAGAAATTTCAAGAAAGCAGCGGAGCTCTTTCT
AGACTCAATATCTACTTTCACAACCTATGAGCTTTTT
■■Homology search results ■■ -
sp_hit_id Q93Y35
Definition sp|Q93Y35|PSMD6_ARATH Probable 26S proteasome non-ATPase regulatory subunit 6 OS=Arabidopsis thaliana
Align length 207
Score (bit) 285.0
E-value 1.0e-76
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK954814|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0021_H04, 5'
(637 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q93Y35|PSMD6_ARATH Probable 26S proteasome non-ATPase regulat... 285 1e-76
sp|Q8W425|PSMD6_ORYSJ 26S proteasome non-ATPase regulatory subun... 278 1e-74
sp|Q99JI4|PSMD6_MOUSE 26S proteasome non-ATPase regulatory subun... 214 4e-55
sp|Q15008|PSMD6_HUMAN 26S proteasome non-ATPase regulatory subun... 211 3e-54
sp|Q3T0B2|PSMD6_BOVIN 26S proteasome non-ATPase regulatory subun... 211 3e-54
sp|Q9V3G7|PSMD6_DROME 26S proteasome non-ATPase regulatory subun... 190 6e-48
sp|Q55C75|PSMD6_DICDI 26S proteasome non-ATPase regulatory subun... 167 6e-41
sp|Q20585|PSMD6_CAEEL 26S proteasome non-ATPase regulatory subun... 162 1e-39
sp|Q10335|RPN7_SCHPO Probable 26S proteasome regulatory subunit ... 135 2e-31
sp|Q06103|RPN7_YEAST 26S proteasome regulatory subunit RPN7 OS=S... 131 3e-30
sp|Q7RXQ1|CSN1_NEUCR COP9 signalosome complex subunit 1 OS=Neuro... 41 0.006
sp|A3DET1|SYT_CLOTH Threonyl-tRNA synthetase OS=Clostridium ther... 39 0.017
sp|Q6K1U0|P2C17_ORYSJ Probable protein phosphatase 2C 17 OS=Oryz... 39 0.030
sp|A6Q2U7|TRUD_NITSB tRNA pseudouridine synthase D OS=Nitratirup... 35 0.43
sp|P35594|CLPE_STRPN ATP-dependent Clp protease ATP-binding subu... 34 0.56
sp|Q3ZXB5|SYT_DEHSC Threonyl-tRNA synthetase OS=Dehalococcoides ... 33 0.95
sp|A5FRB3|SYT_DEHSB Threonyl-tRNA synthetase OS=Dehalococcoides ... 33 0.95
sp|Q817I7|SYFB_BACCR Phenylalanyl-tRNA synthetase beta chain OS=... 33 1.2
sp|Q6ZRF8|RN207_HUMAN RING finger protein 207 OS=Homo sapiens GN... 33 1.2
sp|Q95LS7|CCD96_MACFA Coiled-coil domain-containing protein 96 O... 33 1.2
sp|A7Z033|T11L2_BOVIN T-complex protein 11-like protein 2 OS=Bos... 32 2.8
sp|Q3Z8G2|SYT_DEHE1 Threonyl-tRNA synthetase OS=Dehalococcoides ... 32 2.8
sp|Q5VZK9|LR16A_HUMAN Leucine-rich repeat-containing protein 16A... 32 2.8
sp|P59200|DPO1_STRR6 DNA polymerase I OS=Streptococcus pneumonia... 32 2.8
sp|P59199|DPO1_STRPN DNA polymerase I OS=Streptococcus pneumonia... 32 2.8
sp|Q5PPN7|CCD51_RAT Coiled-coil domain-containing protein 51 OS=... 32 3.6
sp|Q8IYT3|CF097_HUMAN Coiled-coil domain-containing protein C6or... 31 4.7
sp|Q2M329|CCD96_HUMAN Coiled-coil domain-containing protein 96 O... 31 4.7
sp|Q6NZW0|C102A_DANRE Coiled-coil domain-containing protein 102A... 31 4.7
sp|Q816E3|AMPA_BACCR Probable cytosol aminopeptidase OS=Bacillus... 31 4.7

>sp|Q93Y35|PSMD6_ARATH Probable 26S proteasome non-ATPase regulatory
subunit 6 OS=Arabidopsis thaliana GN=At4g24820 PE=2 SV=1
Length = 387

Score = 285 bits (729), Expect = 1e-76
Identities = 145/207 (70%), Positives = 170/207 (82%)
Frame = +2

Query: 17 EASLDVKLTLSQKLFLIRSLNVPDIEKVPLKEDVMTLIRQDGMSGLYQSLCHELGWELDE 196
E S L L+ KLFL+ +VPDIEKV LK +V+ IR GM+ LY++L +LD+
Sbjct: 6 EGSQQPHLILANKLFLLTHPDVPDIEKVQLKSEVLDFIRSHGMAPLYETLIASSVLDLDQ 65

Query: 197 SLLNSMHSSFEEKVKAFDEKIVDAEENLGESEVREAHLAKALYFIQIGDKEKALEQLKIT 376
SLL SM ++ EE++K DEKI DAEENLGESEVREAHLAKALYFI+I DKEKALEQLK+T
Sbjct: 66 SLLESMRAANEEELKKLDEKIADAEENLGESEVREAHLAKALYFIRISDKEKALEQLKLT 125

Query: 377 ETKTVAVGQRMDLVFHTLRIGFFSMDYKLISTSIDKAKSLFEEGGDWERKNRLKVYEGLY 556
E KTVAVGQ+MD+VF+TL++ FF MD+ L+S SIDKAK LFEEGGDWERKNRLKVYEGLY
Sbjct: 126 EGKTVAVGQKMDVVFYTLQLAFFYMDFDLVSKSIDKAKKLFEEGGDWERKNRLKVYEGLY 185

Query: 557 CMATRNFKKAAELFLDSISTFTTYELF 637
CM+TRNFKKAA LFLDSISTFTTYE+F
Sbjct: 186 CMSTRNFKKAASLFLDSISTFTTYEIF 212


>sp|Q8W425|PSMD6_ORYSJ 26S proteasome non-ATPase regulatory subunit
6 OS=Oryza sativa subsp. japonica GN=RPN7 PE=2 SV=1
Length = 389

Score = 278 bits (712), Expect = 1e-74
Identities = 141/200 (70%), Positives = 163/200 (81%)
Frame = +2

Query: 38 LTLSQKLFLIRSLNVPDIEKVPLKEDVMTLIRQDGMSGLYQSLCHELGWELDESLLNSMH 217
L L+ KLFL+ +V D+ KV L+ DV+ ++ D M+ LY+SL E D +LL M
Sbjct: 15 LVLAHKLFLLSHPDVDDLAKVDLRADVLAAVKSDDMASLYESLGAGGVLETDAALLAEMR 74

Query: 218 SSFEEKVKAFDEKIVDAEENLGESEVREAHLAKALYFIQIGDKEKALEQLKITETKTVAV 397
EE+++ DEKI DAEENLGESEVREAHLAK+LYFI++G+KEKALEQLK+TE KTVAV
Sbjct: 75 GRIEEEIRKLDEKIADAEENLGESEVREAHLAKSLYFIRVGEKEKALEQLKVTEGKTVAV 134

Query: 398 GQRMDLVFHTLRIGFFSMDYKLISTSIDKAKSLFEEGGDWERKNRLKVYEGLYCMATRNF 577
GQ+MDLVFHTL+IGFF MD+ LIS SIDKAK LFEEGGDWERKNRLKVYEGLYCMATRNF
Sbjct: 135 GQKMDLVFHTLQIGFFYMDFDLISKSIDKAKKLFEEGGDWERKNRLKVYEGLYCMATRNF 194

Query: 578 KKAAELFLDSISTFTTYELF 637
KKAA LFLDSISTFTTYELF
Sbjct: 195 KKAASLFLDSISTFTTYELF 214


>sp|Q99JI4|PSMD6_MOUSE 26S proteasome non-ATPase regulatory subunit
6 OS=Mus musculus GN=Psmd6 PE=2 SV=1
Length = 389

Score = 214 bits (544), Expect = 4e-55
Identities = 108/211 (51%), Positives = 154/211 (72%), Gaps = 1/211 (0%)
Frame = +2

Query: 5 MEEGEASLDVKLTLSQKLFLIRSLNVPDIE-KVPLKEDVMTLIRQDGMSGLYQSLCHELG 181
+EE + L ++Q FL L++P+ ++E++M +R++ M+ Y++LC L
Sbjct: 6 LEEEGLPKNPDLRIAQLRFL---LSLPEHRGDAAVREELMAAVRENNMAPYYEALCKSLD 62

Query: 182 WELDESLLNSMHSSFEEKVKAFDEKIVDAEENLGESEVREAHLAKALYFIQIGDKEKALE 361
W++D LL+ M + EE++K DE++ DAE+NLGESE+R+A +AKA Y QIGDKE AL
Sbjct: 63 WQMDVDLLSKMKKANEEELKRLDEELEDAEKNLGESEIRDAMMAKAEYLCQIGDKEGALT 122

Query: 362 QLKITETKTVAVGQRMDLVFHTLRIGFFSMDYKLISTSIDKAKSLFEEGGDWERKNRLKV 541
+ T KTVA+G R+D+VF+ LRIG F MD LI+ + +KAKSL EEGGDW+R+NRLKV
Sbjct: 123 AFRKTYDKTVALGHRLDIVFYLLRIGLFYMDNDLITRNTEKAKSLIEEGGDWDRRNRLKV 182

Query: 542 YEGLYCMATRNFKKAAELFLDSISTFTTYEL 634
Y+GLYC+A R+FK+AAELFLD++STFT+YEL
Sbjct: 183 YQGLYCVAIRDFKQAAELFLDTVSTFTSYEL 213


>sp|Q15008|PSMD6_HUMAN 26S proteasome non-ATPase regulatory subunit
6 OS=Homo sapiens GN=PSMD6 PE=1 SV=1
Length = 389

Score = 211 bits (537), Expect = 3e-54
Identities = 106/211 (50%), Positives = 153/211 (72%), Gaps = 1/211 (0%)
Frame = +2

Query: 5 MEEGEASLDVKLTLSQKLFLIRSLNVPDIE-KVPLKEDVMTLIRQDGMSGLYQSLCHELG 181
+EE + L ++Q FL L++P+ +++++M +R + M+ Y++LC L
Sbjct: 6 LEEEGLPKNPDLRIAQLRFL---LSLPEHRGDAAVRDELMAAVRDNNMAPYYEALCKSLD 62

Query: 182 WELDESLLNSMHSSFEEKVKAFDEKIVDAEENLGESEVREAHLAKALYFIQIGDKEKALE 361
W++D LLN M + E+++K DE++ DAE+NLGESE+R+A +AKA Y +IGDKE AL
Sbjct: 63 WQIDVDLLNKMKKANEDELKRLDEELEDAEKNLGESEIRDAMMAKAEYLCRIGDKEGALT 122

Query: 362 QLKITETKTVAVGQRMDLVFHTLRIGFFSMDYKLISTSIDKAKSLFEEGGDWERKNRLKV 541
+ T KTVA+G R+D+VF+ LRIG F MD LI+ + +KAKSL EEGGDW+R+NRLKV
Sbjct: 123 AFRKTYDKTVALGHRLDIVFYLLRIGLFYMDNDLITRNTEKAKSLIEEGGDWDRRNRLKV 182

Query: 542 YEGLYCMATRNFKKAAELFLDSISTFTTYEL 634
Y+GLYC+A R+FK+AAELFLD++STFT+YEL
Sbjct: 183 YQGLYCVAIRDFKQAAELFLDTVSTFTSYEL 213


>sp|Q3T0B2|PSMD6_BOVIN 26S proteasome non-ATPase regulatory subunit
6 OS=Bos taurus GN=PSMD6 PE=2 SV=1
Length = 389

Score = 211 bits (536), Expect = 3e-54
Identities = 106/211 (50%), Positives = 153/211 (72%), Gaps = 1/211 (0%)
Frame = +2

Query: 5 MEEGEASLDVKLTLSQKLFLIRSLNVPDIE-KVPLKEDVMTLIRQDGMSGLYQSLCHELG 181
+EE + L ++Q FL L++P+ +++++M +R + M+ Y++LC L
Sbjct: 6 LEEEGLPKNPDLRIAQLRFL---LSLPEHRGDAAVRDELMAAVRDNNMAPYYEALCKSLE 62

Query: 182 WELDESLLNSMHSSFEEKVKAFDEKIVDAEENLGESEVREAHLAKALYFIQIGDKEKALE 361
W++D LLN M + E+++K DE++ DAE+NLGESE+R+A +AKA Y +IGDKE AL
Sbjct: 63 WQMDVDLLNKMKKANEDELKRLDEELEDAEKNLGESEIRDAMMAKAEYLCRIGDKEGALT 122

Query: 362 QLKITETKTVAVGQRMDLVFHTLRIGFFSMDYKLISTSIDKAKSLFEEGGDWERKNRLKV 541
+ T KTVA+G R+D+VF+ LRIG F MD LI+ + +KAKSL EEGGDW+R+NRLKV
Sbjct: 123 AFRRTYDKTVALGHRLDIVFYLLRIGLFYMDNDLITRNTEKAKSLIEEGGDWDRRNRLKV 182

Query: 542 YEGLYCMATRNFKKAAELFLDSISTFTTYEL 634
Y+GLYC+A R+FK+AAELFLD++STFT+YEL
Sbjct: 183 YQGLYCVAIRDFKQAAELFLDTVSTFTSYEL 213


>sp|Q9V3G7|PSMD6_DROME 26S proteasome non-ATPase regulatory subunit
6 OS=Drosophila melanogaster GN=Rpn7 PE=1 SV=1
Length = 389

Score = 190 bits (482), Expect = 6e-48
Identities = 98/210 (46%), Positives = 138/210 (65%)
Frame = +2

Query: 5 MEEGEASLDVKLTLSQKLFLIRSLNVPDIEKVPLKEDVMTLIRQDGMSGLYQSLCHELGW 184
+EE + L L+Q FL+ + LK ++ IR + M+ Y+ +C ELGW
Sbjct: 6 LEEQGLEKNPNLELAQTKFLLTLAEYK--QDAALKAKLLEAIRTENMAPWYEHICSELGW 63

Query: 185 ELDESLLNSMHSSFEEKVKAFDEKIVDAEENLGESEVREAHLAKALYFIQIGDKEKALEQ 364
+D+ LL M + +V+ D I DAE+NLGE EVREA+L K+ Y +IGDK A
Sbjct: 64 TVDKDLLARMKENNRVEVEQLDAAIEDAEKNLGEMEVREANLKKSEYLCRIGDKAAAETA 123

Query: 365 LKITETKTVAVGQRMDLVFHTLRIGFFSMDYKLISTSIDKAKSLFEEGGDWERKNRLKVY 544
+ T KTV++G R+D+VFH +R+G F +D+ LI+ +IDKAK L EEGGDW+R+NRLKVY
Sbjct: 124 FRKTYEKTVSLGHRLDIVFHLIRLGLFYLDHDLITRNIDKAKYLIEEGGDWDRRNRLKVY 183

Query: 545 EGLYCMATRNFKKAAELFLDSISTFTTYEL 634
+G+Y +A R+FK AA FLD++STFT+YEL
Sbjct: 184 QGVYSVAVRDFKAAATFFLDTVSTFTSYEL 213


>sp|Q55C75|PSMD6_DICDI 26S proteasome non-ATPase regulatory subunit
6 OS=Dictyostelium discoideum GN=psmD6 PE=2 SV=1
Length = 382

Score = 167 bits (422), Expect = 6e-41
Identities = 76/163 (46%), Positives = 122/163 (74%)
Frame = +2

Query: 143 MSGLYQSLCHELGWELDESLLNSMHSSFEEKVKAFDEKIVDAEENLGESEVREAHLAKAL 322
M LY+ L +L W D+ L++ + + E ++KA D KI D+ EN GESE+REA+LAK+
Sbjct: 43 MLPLYKILVEQLKWTEDQGLVSKLKAENESELKALDNKITDSVENFGESEIREAYLAKSD 102

Query: 323 YFIQIGDKEKALEQLKITETKTVAVGQRMDLVFHTLRIGFFSMDYKLISTSIDKAKSLFE 502
++ +IGDK+ A+E + T KTV +GQ++D+VF +R+G F MD+ +++ +++KA+SL E
Sbjct: 103 FYCRIGDKDTAVEMYRQTFEKTVPLGQKLDIVFTLIRMGIFWMDHDIVTRNLEKAQSLVE 162

Query: 503 EGGDWERKNRLKVYEGLYCMATRNFKKAAELFLDSISTFTTYE 631
EGGDW+RKNRLK YE +Y M+ R FK+A++L+L+++++FT+ E
Sbjct: 163 EGGDWDRKNRLKTYEAVYKMSIRQFKEASDLYLETVASFTSTE 205


>sp|Q20585|PSMD6_CAEEL 26S proteasome non-ATPase regulatory subunit
6 OS=Caenorhabditis elegans GN=rpn-7 PE=2 SV=1
Length = 410

Score = 162 bits (410), Expect = 1e-39
Identities = 85/199 (42%), Positives = 126/199 (63%)
Frame = +2

Query: 38 LTLSQKLFLIRSLNVPDIEKVPLKEDVMTLIRQDGMSGLYQSLCHELGWELDESLLNSMH 217
L LSQ F++ V K E + I++ M+ Y+ +C + +D + L +M
Sbjct: 29 LELSQTRFMLNHPEVDSSVKEAKLEKLQETIKEFDMAPFYELVCADFKIVVDATQLAAMK 88

Query: 218 SSFEEKVKAFDEKIVDAEENLGESEVREAHLAKALYFIQIGDKEKALEQLKITETKTVAV 397
++ ++K+ ++ DAE+NLGESEVR+ L K Y+ QIGDK+ AL+ T KTV +
Sbjct: 89 AANQKKIDEITAEVEDAEKNLGESEVRQGLLRKFEYYCQIGDKDNALKAYTATYEKTVGM 148

Query: 398 GQRMDLVFHTLRIGFFSMDYKLISTSIDKAKSLFEEGGDWERKNRLKVYEGLYCMATRNF 577
G R+D+VF +R+G F +D+ LI+ I KAK L E+GGDWERKNRL+ YE LY M+ R+F
Sbjct: 149 GYRIDVVFAMIRVGLFFLDHHLINKFITKAKELMEQGGDWERKNRLRSYEALYRMSVRDF 208

Query: 578 KKAAELFLDSISTFTTYEL 634
AA+LFL+++ TF +YEL
Sbjct: 209 AGAADLFLEAVPTFGSYEL 227


>sp|Q10335|RPN7_SCHPO Probable 26S proteasome regulatory subunit
rpn7 OS=Schizosaccharomyces pombe GN=rpn7 PE=2 SV=1
Length = 409

Score = 135 bits (340), Expect = 2e-31
Identities = 77/205 (37%), Positives = 119/205 (58%), Gaps = 6/205 (2%)
Frame = +2

Query: 38 LTLSQKLFLIRSLNVPDIEKVPLK--EDVMTLIRQDGMSGLYQSLCHE----LGWELDES 199
LT+SQ +F L+ P +E K + + + IR ++ LY+ L + D +
Sbjct: 23 LTISQAIF---ELSSPFLENKSQKALDTLFSAIRDHDLAPLYKYLSENPKTSASIDFDSN 79

Query: 200 LLNSMHSSFEEKVKAFDEKIVDAEENLGESEVREAHLAKALYFIQIGDKEKALEQLKITE 379
LNSM EEK+ FD+ I DA+E GE E+ EA KA Y+ I D+E+ ++ T
Sbjct: 80 FLNSMIKKNEEKLAEFDKAIEDAQELNGEHEILEAMKNKADYYTNICDRERGVQLCDETF 139

Query: 380 TKTVAVGQRMDLVFHTLRIGFFSMDYKLISTSIDKAKSLFEEGGDWERKNRLKVYEGLYC 559
+ G ++D++F +R+ + D +++ ++K K L E+GGDWERKNRLK Y+G+Y
Sbjct: 140 ERATLTGMKIDVLFSKIRLAYVYADMRVVGQLLEKLKPLIEKGGDWERKNRLKAYQGIYL 199

Query: 560 MATRNFKKAAELFLDSISTFTTYEL 634
M+ RNF AA+L LD +STF++ EL
Sbjct: 200 MSIRNFSGAADLLLDCMSTFSSTEL 224


>sp|Q06103|RPN7_YEAST 26S proteasome regulatory subunit RPN7
OS=Saccharomyces cerevisiae GN=RPN7 PE=1 SV=3
Length = 429

Score = 131 bits (329), Expect = 3e-30
Identities = 74/218 (33%), Positives = 120/218 (55%), Gaps = 21/218 (9%)
Frame = +2

Query: 44 LSQKLFLIRSLNVPDIEKVPLKEDVMTLIRQDGMSGLYQSLCHEL--------------- 178
+S+K FL+ V ++ E V+ I+++ M+ Y+ LC E
Sbjct: 26 VSEKAFLLTQSKVSIEQRKEAAEFVLAKIKEEEMAPYYKYLCEEYLVNNGQSDLEHDEKS 85

Query: 179 ----GW-ELDESLLNSMHSSFEEKVKAFDEKIVDAEEN-LGESEVREAHLAKALYFIQIG 340
W + D+ L N + E K+K +EKI EE+ GE E +A + Y+ QIG
Sbjct: 86 DSLNEWIKFDQELYNELCKKNESKIKELNEKIQKLEEDDEGELEQAQAWINLGEYYAQIG 145

Query: 341 DKEKALEQLKITETKTVAVGQRMDLVFHTLRIGFFSMDYKLISTSIDKAKSLFEEGGDWE 520
DK+ A + L + +K ++ G ++D++ R+GFF D + ++ S+ E+GGDWE
Sbjct: 146 DKDNAEKTLGKSLSKAISTGAKIDVMLTIARLGFFYNDQLYVKEKLEAVNSMIEKGGDWE 205

Query: 521 RKNRLKVYEGLYCMATRNFKKAAELFLDSISTFTTYEL 634
R+NR K Y G++C+A RNFK+AA+L +DS++TFT+ EL
Sbjct: 206 RRNRYKTYYGIHCLAVRNFKEAAKLLVDSLATFTSIEL 243


tr_hit_id A9NT48
Definition tr|A9NT48|A9NT48_PICSI Putative uncharacterized protein OS=Picea sitchensis
Align length 211
Score (bit) 310.0
E-value 5.0e-83
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK954814|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0021_H04, 5'
(637 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9NT48|A9NT48_PICSI Putative uncharacterized protein OS=Picea... 310 5e-83
tr|A9SEF8|A9SEF8_PHYPA Predicted protein OS=Physcomitrella paten... 307 4e-82
tr|A9S997|A9S997_PHYPA Predicted protein OS=Physcomitrella paten... 307 4e-82
tr|Q6EMB5|Q6EMB5_ARATH 26S proteasome subunit RPN7 OS=Arabidopsi... 285 2e-75
tr|B7FKI9|B7FKI9_MEDTR Putative uncharacterized protein OS=Medic... 281 2e-74
tr|A7QZ28|A7QZ28_VITVI Chromosome chr17 scaffold_263, whole geno... 281 2e-74
tr|Q0JC94|Q0JC94_ORYSJ Os04g0485000 protein OS=Oryza sativa subs... 278 2e-73
tr|Q01IF7|Q01IF7_ORYSA H0805A05.13 protein OS=Oryza sativa GN=H0... 278 2e-73
tr|A2XUT7|A2XUT7_ORYSI Putative uncharacterized protein OS=Oryza... 278 2e-73
tr|B6T9G1|B6T9G1_MAIZE 26S proteasome non-ATPase regulatory subu... 276 1e-72
tr|B4FVL1|B4FVL1_MAIZE 26S proteasome non-ATPase regulatory subu... 273 5e-72
tr|Q6K5H9|Q6K5H9_ORYSJ Os02g0600100 protein OS=Oryza sativa subs... 270 4e-71
tr|A0MKC7|A0MKC7_CAPAN 26S proteasome subunit RPN7 OS=Capsicum a... 262 1e-68
tr|A2X6U4|A2X6U4_ORYSI Putative uncharacterized protein OS=Oryza... 259 7e-68
tr|A3BP91|A3BP91_ORYSJ Putative uncharacterized protein OS=Oryza... 222 1e-56
tr|Q6PCT9|Q6PCT9_RAT Proteasome (Prosome, macropain) 26S subunit... 214 5e-54
tr|B7PX86|B7PX86_IXOSC 26S proteasome regulatory complex, subuni... 212 2e-53
tr|Q8C1T2|Q8C1T2_MOUSE Putative uncharacterized protein OS=Mus m... 211 2e-53
tr|A8K2E0|A8K2E0_HUMAN cDNA FLJ76777, highly similar to Homo sap... 211 3e-53
tr|Q4SBC3|Q4SBC3_TETNG Chromosome 11 SCAF14674, whole genome sho... 210 5e-53
tr|B5XBN2|B5XBN2_SALSA 26S proteasome non-ATPase regulatory subu... 210 7e-53
tr|Q6P2Y7|Q6P2Y7_XENTR Proteasome (Prosome, macropain) 26S subun... 209 1e-52
tr|B5DGF7|B5DGF7_SALSA 26S proteasome non-ATPase regulatory subu... 209 1e-52
tr|B5X9I8|B5X9I8_SALSA 26S proteasome non-ATPase regulatory subu... 208 2e-52
tr|Q7ZYE1|Q7ZYE1_XENLA p44s10-prov protein OS=Xenopus laevis PE=... 207 3e-52
tr|Q7ZWE5|Q7ZWE5_DANRE Proteasome (Prosome, macropain) 26S subun... 207 3e-52
tr|Q5XGT1|Q5XGT1_XENLA LOC495148 protein OS=Xenopus laevis GN=ps... 204 3e-51
tr|Q6UV22|Q6UV22_HUMAN KIAA0107 isoform OS=Homo sapiens GN=PSMD6... 202 2e-50
tr|B3KT66|B3KT66_HUMAN cDNA FLJ37740 fis, clone BRHIP2021870, hi... 202 2e-50
tr|B6LLV1|B6LLV1_BRAFL Putative uncharacterized protein OS=Branc... 201 2e-50

>tr|A9NT48|A9NT48_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 386

Score = 310 bits (794), Expect = 5e-83
Identities = 150/211 (71%), Positives = 181/211 (85%)
Frame = +2

Query: 5 MEEGEASLDVKLTLSQKLFLIRSLNVPDIEKVPLKEDVMTLIRQDGMSGLYQSLCHELGW 184
M+ E + + KL L+ K+FL+R +VPDIEK+ LK +V LI+ + M+ LY+SLC ELGW
Sbjct: 1 MDPQEGTQEPKLILAHKIFLLRHPDVPDIEKIELKNEVFNLIKAEDMANLYESLCGELGW 60

Query: 185 ELDESLLNSMHSSFEEKVKAFDEKIVDAEENLGESEVREAHLAKALYFIQIGDKEKALEQ 364
++D+ LL +M + EE++K DEK+ DAEENLGESEVREAHLAK+LY+I+IGDKEKALEQ
Sbjct: 61 DIDQDLLQTMRAKIEEELKKLDEKVSDAEENLGESEVREAHLAKSLYYIRIGDKEKALEQ 120

Query: 365 LKITETKTVAVGQRMDLVFHTLRIGFFSMDYKLISTSIDKAKSLFEEGGDWERKNRLKVY 544
+KITE KTVAVGQ+MDLVFHTL++GFF MD+ LIS IDKAK+LFEEGGDWERKNRLKVY
Sbjct: 121 IKITEGKTVAVGQKMDLVFHTLQLGFFFMDFDLISKGIDKAKNLFEEGGDWERKNRLKVY 180

Query: 545 EGLYCMATRNFKKAAELFLDSISTFTTYELF 637
EGLYCM+TRNFKKAAELFLDSISTFTTYELF
Sbjct: 181 EGLYCMSTRNFKKAAELFLDSISTFTTYELF 211


>tr|A9SEF8|A9SEF8_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_184067 PE=4 SV=1
Length = 386

Score = 307 bits (786), Expect = 4e-82
Identities = 152/211 (72%), Positives = 182/211 (86%)
Frame = +2

Query: 5 MEEGEASLDVKLTLSQKLFLIRSLNVPDIEKVPLKEDVMTLIRQDGMSGLYQSLCHELGW 184
MEE EA+ D KL+L+QKLFL+RS +V DIEK LKE+V+ LI+ D M+GLYQ CHELGW
Sbjct: 1 MEEKEATQDSKLSLAQKLFLLRSPDVEDIEKASLKEEVLALIKSDDMAGLYQFYCHELGW 60

Query: 185 ELDESLLNSMHSSFEEKVKAFDEKIVDAEENLGESEVREAHLAKALYFIQIGDKEKALEQ 364
ELD+ +++M++ E++K D+KI DAEENLGESEVREA LAKAL++I+IGDKE +LEQ
Sbjct: 61 ELDQGCVDAMNAKNAEELKRLDDKIADAEENLGESEVREALLAKALFYIRIGDKENSLEQ 120

Query: 365 LKITETKTVAVGQRMDLVFHTLRIGFFSMDYKLISTSIDKAKSLFEEGGDWERKNRLKVY 544
LKITE KTVAVGQ+MDLVFHTLR+GFF +D+ LI +I+KAKSLF+EGGDWERKNRLKVY
Sbjct: 121 LKITEAKTVAVGQKMDLVFHTLRLGFFHLDFALILRNIEKAKSLFDEGGDWERKNRLKVY 180

Query: 545 EGLYCMATRNFKKAAELFLDSISTFTTYELF 637
EGLYCMATRNFK+AA LFLDSISTFTT ELF
Sbjct: 181 EGLYCMATRNFKQAANLFLDSISTFTTTELF 211


>tr|A9S997|A9S997_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_209895 PE=4 SV=1
Length = 386

Score = 307 bits (786), Expect = 4e-82
Identities = 152/211 (72%), Positives = 182/211 (86%)
Frame = +2

Query: 5 MEEGEASLDVKLTLSQKLFLIRSLNVPDIEKVPLKEDVMTLIRQDGMSGLYQSLCHELGW 184
MEE A+ D KL L+ KLFL+RS +V DIEK LK++VMT+I+ D M+GLYQS ELGW
Sbjct: 1 MEERVATQDPKLVLAHKLFLLRSSDVEDIEKASLKDEVMTIIKSDNMAGLYQSCSQELGW 60

Query: 185 ELDESLLNSMHSSFEEKVKAFDEKIVDAEENLGESEVREAHLAKALYFIQIGDKEKALEQ 364
ELD++LL+S++SS ++K D+KI DAEENLGESEVREA LAKAL++I+IGDKE +LEQ
Sbjct: 61 ELDQTLLDSINSSNANELKTLDDKIADAEENLGESEVREALLAKALFYIRIGDKENSLEQ 120

Query: 365 LKITETKTVAVGQRMDLVFHTLRIGFFSMDYKLISTSIDKAKSLFEEGGDWERKNRLKVY 544
LK+TE KTVAVGQ+MDLVFHTLR+GFF +D+ LIS +IDKAKSLF +GGDWERKNRLKVY
Sbjct: 121 LKVTEAKTVAVGQKMDLVFHTLRLGFFHLDFNLISRNIDKAKSLFADGGDWERKNRLKVY 180

Query: 545 EGLYCMATRNFKKAAELFLDSISTFTTYELF 637
EGLYC+ATRNFK+AA LFLDSISTFTTYELF
Sbjct: 181 EGLYCLATRNFKQAATLFLDSISTFTTYELF 211


>tr|Q6EMB5|Q6EMB5_ARATH 26S proteasome subunit RPN7 OS=Arabidopsis
thaliana GN=RPN7 PE=2 SV=1
Length = 387

Score = 285 bits (729), Expect = 2e-75
Identities = 145/207 (70%), Positives = 170/207 (82%)
Frame = +2

Query: 17 EASLDVKLTLSQKLFLIRSLNVPDIEKVPLKEDVMTLIRQDGMSGLYQSLCHELGWELDE 196
E S L L+ KLFL+ +VPDIEKV LK +V+ IR GM+ LY++L +LD+
Sbjct: 6 EGSQQPHLILANKLFLLTHPDVPDIEKVQLKSEVLDFIRSHGMAPLYETLIASSVLDLDQ 65

Query: 197 SLLNSMHSSFEEKVKAFDEKIVDAEENLGESEVREAHLAKALYFIQIGDKEKALEQLKIT 376
SLL SM ++ EE++K DEKI DAEENLGESEVREAHLAKALYFI+I DKEKALEQLK+T
Sbjct: 66 SLLESMRAANEEELKKLDEKIADAEENLGESEVREAHLAKALYFIRISDKEKALEQLKLT 125

Query: 377 ETKTVAVGQRMDLVFHTLRIGFFSMDYKLISTSIDKAKSLFEEGGDWERKNRLKVYEGLY 556
E KTVAVGQ+MD+VF+TL++ FF MD+ L+S SIDKAK LFEEGGDWERKNRLKVYEGLY
Sbjct: 126 EGKTVAVGQKMDVVFYTLQLAFFYMDFDLVSKSIDKAKKLFEEGGDWERKNRLKVYEGLY 185

Query: 557 CMATRNFKKAAELFLDSISTFTTYELF 637
CM+TRNFKKAA LFLDSISTFTTYE+F
Sbjct: 186 CMSTRNFKKAASLFLDSISTFTTYEIF 212


>tr|B7FKI9|B7FKI9_MEDTR Putative uncharacterized protein OS=Medicago
truncatula PE=2 SV=1
Length = 387

Score = 281 bits (720), Expect = 2e-74
Identities = 140/209 (66%), Positives = 172/209 (82%)
Frame = +2

Query: 11 EGEASLDVKLTLSQKLFLIRSLNVPDIEKVPLKEDVMTLIRQDGMSGLYQSLCHELGWEL 190
EGE +L L+ KLFL++ +V DI+KV KEDV +++ M LY++L + ++
Sbjct: 4 EGEEVQQPQLVLADKLFLLKQKDVQDIDKVRFKEDVFNFVKEHDMVPLYETLVADSVLDM 63

Query: 191 DESLLNSMHSSFEEKVKAFDEKIVDAEENLGESEVREAHLAKALYFIQIGDKEKALEQLK 370
+ +LL+SM + ++++K DEKI DAEENLGESEVREAHLAK+L+FI+IGDKEKALE LK
Sbjct: 64 NRALLDSMRAKIDDELKKLDEKIADAEENLGESEVREAHLAKSLFFIRIGDKEKALEHLK 123

Query: 371 ITETKTVAVGQRMDLVFHTLRIGFFSMDYKLISTSIDKAKSLFEEGGDWERKNRLKVYEG 550
ITETKTVAVGQ+MDLVF+TL++GFF MD+ LIS SIDKAK LFEEGGDWERKNRLKVYEG
Sbjct: 124 ITETKTVAVGQKMDLVFYTLQLGFFGMDFDLISKSIDKAKGLFEEGGDWERKNRLKVYEG 183

Query: 551 LYCMATRNFKKAAELFLDSISTFTTYELF 637
LYCM+TRNF+KAA LFLDSISTFTTYELF
Sbjct: 184 LYCMSTRNFEKAATLFLDSISTFTTYELF 212


>tr|A7QZ28|A7QZ28_VITVI Chromosome chr17 scaffold_263, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00010470001
PE=4 SV=1
Length = 386

Score = 281 bits (720), Expect = 2e-74
Identities = 139/211 (65%), Positives = 174/211 (82%)
Frame = +2

Query: 5 MEEGEASLDVKLTLSQKLFLIRSLNVPDIEKVPLKEDVMTLIRQDGMSGLYQSLCHELGW 184
ME + + L L+ KLFL+ + DIEKV LKE+V ++ D M+ LY++L +
Sbjct: 1 MESQDGTQQPHLVLAHKLFLLTHPDAQDIEKVRLKEEVFAAVKVDDMASLYETLAADSVL 60

Query: 185 ELDESLLNSMHSSFEEKVKAFDEKIVDAEENLGESEVREAHLAKALYFIQIGDKEKALEQ 364
E+D+++L++M + ++++K DEKI DAEENLGESEVREAHLAK+L++I+IGDKEKALEQ
Sbjct: 61 EMDQAVLDTMRAKIDDELKKLDEKIADAEENLGESEVREAHLAKSLFYIRIGDKEKALEQ 120

Query: 365 LKITETKTVAVGQRMDLVFHTLRIGFFSMDYKLISTSIDKAKSLFEEGGDWERKNRLKVY 544
LK+TE+KTVAVGQ+MDLVF+TL +GFF MD+ LIS SIDKAK+LFEEGGDWERKNRLKVY
Sbjct: 121 LKVTESKTVAVGQKMDLVFYTLLLGFFYMDFDLISKSIDKAKNLFEEGGDWERKNRLKVY 180

Query: 545 EGLYCMATRNFKKAAELFLDSISTFTTYELF 637
EGLYCM+TRNFKKAA LFLDSISTFTTYELF
Sbjct: 181 EGLYCMSTRNFKKAANLFLDSISTFTTYELF 211


>tr|Q0JC94|Q0JC94_ORYSJ Os04g0485000 protein OS=Oryza sativa subsp.
japonica GN=Os04g0485000 PE=2 SV=1
Length = 389

Score = 278 bits (712), Expect = 2e-73
Identities = 141/200 (70%), Positives = 163/200 (81%)
Frame = +2

Query: 38 LTLSQKLFLIRSLNVPDIEKVPLKEDVMTLIRQDGMSGLYQSLCHELGWELDESLLNSMH 217
L L+ KLFL+ +V D+ KV L+ DV+ ++ D M+ LY+SL E D +LL M
Sbjct: 15 LVLAHKLFLLSHPDVDDLAKVDLRADVLAAVKSDDMASLYESLGAGGVLETDAALLAEMR 74

Query: 218 SSFEEKVKAFDEKIVDAEENLGESEVREAHLAKALYFIQIGDKEKALEQLKITETKTVAV 397
EE+++ DEKI DAEENLGESEVREAHLAK+LYFI++G+KEKALEQLK+TE KTVAV
Sbjct: 75 GRIEEEIRKLDEKIADAEENLGESEVREAHLAKSLYFIRVGEKEKALEQLKVTEGKTVAV 134

Query: 398 GQRMDLVFHTLRIGFFSMDYKLISTSIDKAKSLFEEGGDWERKNRLKVYEGLYCMATRNF 577
GQ+MDLVFHTL+IGFF MD+ LIS SIDKAK LFEEGGDWERKNRLKVYEGLYCMATRNF
Sbjct: 135 GQKMDLVFHTLQIGFFYMDFDLISKSIDKAKKLFEEGGDWERKNRLKVYEGLYCMATRNF 194

Query: 578 KKAAELFLDSISTFTTYELF 637
KKAA LFLDSISTFTTYELF
Sbjct: 195 KKAASLFLDSISTFTTYELF 214


>tr|Q01IF7|Q01IF7_ORYSA H0805A05.13 protein OS=Oryza sativa
GN=H0805A05.13 PE=4 SV=1
Length = 389

Score = 278 bits (712), Expect = 2e-73
Identities = 141/200 (70%), Positives = 163/200 (81%)
Frame = +2

Query: 38 LTLSQKLFLIRSLNVPDIEKVPLKEDVMTLIRQDGMSGLYQSLCHELGWELDESLLNSMH 217
L L+ KLFL+ +V D+ KV L+ DV+ ++ D M+ LY+SL E D +LL M
Sbjct: 15 LVLAHKLFLLSHPDVDDLAKVDLRADVLAAVKSDDMASLYESLGAGGVLETDAALLAEMR 74

Query: 218 SSFEEKVKAFDEKIVDAEENLGESEVREAHLAKALYFIQIGDKEKALEQLKITETKTVAV 397
EE+++ DEKI DAEENLGESEVREAHLAK+LYFI++G+KEKALEQLK+TE KTVAV
Sbjct: 75 GRIEEEIRKLDEKIADAEENLGESEVREAHLAKSLYFIRVGEKEKALEQLKVTEGKTVAV 134

Query: 398 GQRMDLVFHTLRIGFFSMDYKLISTSIDKAKSLFEEGGDWERKNRLKVYEGLYCMATRNF 577
GQ+MDLVFHTL+IGFF MD+ LIS SIDKAK LFEEGGDWERKNRLKVYEGLYCMATRNF
Sbjct: 135 GQKMDLVFHTLQIGFFYMDFDLISKSIDKAKKLFEEGGDWERKNRLKVYEGLYCMATRNF 194

Query: 578 KKAAELFLDSISTFTTYELF 637
KKAA LFLDSISTFTTYELF
Sbjct: 195 KKAASLFLDSISTFTTYELF 214


>tr|A2XUT7|A2XUT7_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_16374 PE=4 SV=1
Length = 389

Score = 278 bits (712), Expect = 2e-73
Identities = 141/200 (70%), Positives = 163/200 (81%)
Frame = +2

Query: 38 LTLSQKLFLIRSLNVPDIEKVPLKEDVMTLIRQDGMSGLYQSLCHELGWELDESLLNSMH 217
L L+ KLFL+ +V D+ KV L+ DV+ ++ D M+ LY+SL E D +LL M
Sbjct: 15 LVLAHKLFLLSHPDVDDLAKVDLRADVLAAVKSDDMASLYESLGAGGVLETDAALLAEMR 74

Query: 218 SSFEEKVKAFDEKIVDAEENLGESEVREAHLAKALYFIQIGDKEKALEQLKITETKTVAV 397
EE+++ DEKI DAEENLGESEVREAHLAK+LYFI++G+KEKALEQLK+TE KTVAV
Sbjct: 75 GRIEEEIRKLDEKIADAEENLGESEVREAHLAKSLYFIRVGEKEKALEQLKVTEGKTVAV 134

Query: 398 GQRMDLVFHTLRIGFFSMDYKLISTSIDKAKSLFEEGGDWERKNRLKVYEGLYCMATRNF 577
GQ+MDLVFHTL+IGFF MD+ LIS SIDKAK LFEEGGDWERKNRLKVYEGLYCMATRNF
Sbjct: 135 GQKMDLVFHTLQIGFFYMDFDLISKSIDKAKKLFEEGGDWERKNRLKVYEGLYCMATRNF 194

Query: 578 KKAAELFLDSISTFTTYELF 637
KKAA LFLDSISTFTTYELF
Sbjct: 195 KKAASLFLDSISTFTTYELF 214


>tr|B6T9G1|B6T9G1_MAIZE 26S proteasome non-ATPase regulatory subunit
6 OS=Zea mays PE=2 SV=1
Length = 388

Score = 276 bits (705), Expect = 1e-72
Identities = 138/200 (69%), Positives = 164/200 (82%)
Frame = +2

Query: 38 LTLSQKLFLIRSLNVPDIEKVPLKEDVMTLIRQDGMSGLYQSLCHELGWELDESLLNSMH 217
L L+ KLFL+ +V D+ KV L+ DV ++ D M+ LY+SL + E D +LL M
Sbjct: 14 LVLAHKLFLLSHSDVDDLAKVDLRADVFAAVKSDDMAALYESLAADGVLETDAALLAEMR 73

Query: 218 SSFEEKVKAFDEKIVDAEENLGESEVREAHLAKALYFIQIGDKEKALEQLKITETKTVAV 397
+ +E+++ DEKI DAEENLGESEVREAHLAK+LYFI++G+KEKALEQLK+TE KTVAV
Sbjct: 74 ARIDEEIRKLDEKIADAEENLGESEVREAHLAKSLYFIRVGEKEKALEQLKVTEGKTVAV 133

Query: 398 GQRMDLVFHTLRIGFFSMDYKLISTSIDKAKSLFEEGGDWERKNRLKVYEGLYCMATRNF 577
GQ+MDLVF+TL+IG F MD+ LIS SIDKAK+LFEEGGDWERKNRLKVYEGLYCMATRNF
Sbjct: 134 GQKMDLVFYTLQIGLFYMDFDLISKSIDKAKNLFEEGGDWERKNRLKVYEGLYCMATRNF 193

Query: 578 KKAAELFLDSISTFTTYELF 637
KKAA LFLDSISTFTTYELF
Sbjct: 194 KKAASLFLDSISTFTTYELF 213