DK954819 [AcEST]

DK954819
Clone id	TST39A01NGRL0021_H10
Library	TST39
Length	588
Definition	Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0021_H10. 5' end sequence.
Accession	DK954819
Tissue type	prothallia with plantlets
Developmental stage	gametophytes with sporophytes
Contig ID	CL613Contig1
Sequence	CTTTGGACTCCCTGAGTATAGAGGCAGTAATGGTGTTGATACTGACGGTGCTTCTCATGT TCATCGTTATGTCCCCGGCGACGTGGTCTTCTTCATCGTCGCAATCCGCCGCACAGGCAT CAGCGGGGGAGGGGGAGCTGCAGTATGAGCATCCGTCCTCCTGCATTTCGACCGGCCTTG ACTACGTCTTCTCCCCTTCGCCCCCCTGCACGCCCTTCTCTTCTCTCTTTGATGATGAAC CCAGTCCTTGTGAGAGTGCTACCCCTCGAGCAGAGCCAGAGCCCGCACCTGCGAATGAGT CTACACCTGGCTCCGGCGCAGCACCGCTTGCATTGGCTCTTTGATCTTCTTTACATCAGG TATTTTCCGACATGCACAGTTCGGTAGTGGCTTTCATTTTTAAGAAGAGGTAACTATTGA AGGAGAGGTACTGGTCTATGAAGCATGCCCAACAAACGAAATGTTTGCAGAGTTAATTGG CAACTCAGATGTCAATTATGGTCCCCTCCAACCGTTTTAATATAGAGCATATGGTCTTGC TTTGCTGTGTATCATATAGATGGACATTTCAGAGGTTGACGAGGGATG
■■Homology search results ■■	-
Swiss-Prot (release 56.9)	Link to BlastX Result : Swiss-Prot
sp_hit_id	P34943
Definition	sp\|P34943\|NDUA9_BOVIN NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial OS=Bos taurus
Align length	33
Score (bit)	31.2
E-value	4.0
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DK954819\|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0021_H10, 5' (588 letters) Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value sp\|P34943\|NDUA9_BOVIN NADH dehydrogenase [ubiquinone] 1 alpha su... 31 4.0 >sp\|P34943\|NDUA9_BOVIN NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial OS=Bos taurus GN=NDUFA9 PE=1 SV=1 Length = 380 Score = 31.2 bits (69), Expect = 4.0 Identities = 14/33 (42%), Positives = 22/33 (66%) Frame = +1 Query: 235 MNPVLVRVLPLEQSQSPHLRMSLHLAPAQHRLH 333 ++P +VRVLP+ +S P L S+ +P Q +LH Sbjct: 5 VHPRVVRVLPMSRSSVPALAASVFHSPPQRQLH 37
TrEMBL (release 39.9)	Link to BlastX Result : TrEMBL
tr_hit_id	-
Definition	No hits.
Align length	-
Score (bit)	-
E-value	-
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DK954819\|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0021_H10, 5' (588 letters) Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters Searching..................................................done *** No hits found ****