| DK954822 | 
  
    | Clone id | TST39A01NGRL0021_H14 | 
  
    | Library | TST39 | 
  
    | Length | 554 | 
  
    | Definition | Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0021_H14. 5' end sequence. | 
  
    | Accession | DK954822 | 
  
    | Tissue type | prothallia with plantlets | 
  
    | Developmental stage | gametophytes with sporophytes | 
  
    | Contig ID | CL128Contig1 | 
  
    | Sequence | GGACAACATATGGTTTAAGCCTGTGGCCAAGGTTATGGATGACAGAGATGAAGCCATCAGGCAGAAGCTTATGAGTGTGCGCGACAATTCCGACGAGATCAAGAAGCTGCAAGAGCAGGC
 TGAGGCGATCCTCAAGGCCGCACGTGCAGAGACCACGGCGGAGCTCAACAAGATGAAGAG
 GGAGACGGCAGCAAAGCTTGATGCCAAGCTTCAGGAATCACGCGAAAGAATAGAGAAAGA
 GCTTGCAGAAGCTATTGCAAACCTAGAGGTGCAGAAGCAGGAGACTTTGAAGAGCCTTGA
 CAAGGAAGTCCAAGATCTAAGTGAGGAGATTATTGCTAAGGTCATTCCCTTCAAGATATG
 AGATGTGAGTTCGTCCTATTTTTTTGCTCCTTGCACTTCATTTCCGGCTGGAGCGAGAGG
 CCCTTTCAACAATGCCCCCTCTCGCCCTGTTGTACCCGATCATGTAATTTGTCCAAATGT
 AATTGCCTCTCACATTGATAATGCCATGTGCAAGACCTGGCTGAATTCAAAAAAAAAAAA
 AAAAAAAAAAAAAA
 | 
  
    | ■■Homology search results ■■ | - | 
  
    | Swiss-Prot  (release 56.9) | Link to BlastX Result : Swiss-Prot | 
  
    | sp_hit_id | P31853 | 
  
    | Definition | sp|P31853|ATPX_SPIOL ATP synthase B' chain, chloroplastic OS=Spinacia oleracea | 
  
    | Align length | 116 | 
  
    | Score (bit) | 126.0 | 
  
    | E-value | 7.0e-29 | 
  
    | Report |  BLASTX 2.2.19 [Nov-02-2008]
 
 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
 Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
 "Gapped BLAST and PSI-BLAST: a new generation of protein database search
 programs",  Nucleic Acids Res. 25:3389-3402.
 
 Query= DK954822|Adiantum capillus-veneris mRNA, clone:
 TST39A01NGRL0021_H14, 5'
 (528 letters)
 
 Database: uniprot_sprot.fasta
 412,525 sequences; 148,809,765 total letters
 
 Searching..................................................done
 
 
 
 Score    E
 Sequences producing significant alignments:                      (bits) Value
 
 sp|P31853|ATPX_SPIOL ATP synthase B' chain, chloroplastic OS=Spi...   126   7e-29
 sp|P48085|ATPX_CYAPA ATP synthase B' chain, cyanelle OS=Cyanopho...    70   5e-12
 sp|Q05367|ATPX_SYNP1 ATP synthase B' chain OS=Synechococcus sp. ...    69   2e-11
 sp|Q1XDP2|ATPX_PORYE ATP synthase B' chain, chloroplastic OS=Por...    67   7e-11
 sp|P51245|ATPX_PORPU ATP synthase B' chain, chloroplastic OS=Por...    67   7e-11
 sp|P21904|ATPF_PROMO ATP synthase B chain, sodium ion specific O...    60   6e-09
 sp|P08446|ATPX_SYNP6 ATP synthase B' chain OS=Synechococcus sp. ...    60   8e-09
 sp|O78478|ATPX_GUITH ATP synthase B' chain, chloroplastic OS=Gui...    59   1e-08
 sp|P27183|ATPX_SYNY3 ATP synthase B' chain OS=Synechocystis sp. ...    58   3e-08
 sp|Q9TM29|ATPX_CYACA ATP synthase B' chain, chloroplastic OS=Cya...    56   1e-07
 sp|P20601|ATPF_BACME ATP synthase B chain OS=Bacillus megaterium...    56   1e-07
 sp|Q02852|ATPX_ANTSP ATP synthase B' chain, chloroplastic OS=Ant...    55   2e-07
 sp|Q5SHB3|CNPD_THET8 2',3'-cyclic-nucleotide 2'-phosphodiesteras...    46   1e-04
 sp|Q72HM1|CNPD_THET2 2',3'-cyclic-nucleotide 2'-phosphodiesteras...    45   2e-04
 sp|P26681|ATPF_ENTHR ATP synthase B chain OS=Enterococcus hirae ...    45   2e-04
 sp|O29104|VATE_ARCFU V-type ATP synthase subunit E OS=Archaeoglo...    44   5e-04
 sp|Q5TZA2|CROCC_HUMAN Rootletin OS=Homo sapiens GN=CROCC PE=1 SV=1     44   6e-04
 sp|A2AJI0|MA7D1_MOUSE MAP7 domain-containing protein 1 OS=Mus mu...    43   0.001
 sp|Q9Y4D1|DAAM1_HUMAN Disheveled-associated activator of morphog...    42   0.002
 sp|Q80UF4|SDCG8_MOUSE Serologically defined colon cancer antigen...    41   0.003
 sp|Q49Z54|ATPF_STAS1 ATP synthase B chain OS=Staphylococcus sapr...    41   0.003
 sp|Q8CJ40|CROCC_MOUSE Rootletin OS=Mus musculus GN=Crocc PE=1 SV=1     41   0.004
 sp|P57120|ATPF_BUCAI ATP synthase B chain OS=Buchnera aphidicola...    41   0.004
 sp|Q9UPV0|CE164_HUMAN Centrosomal protein of 164 kDa OS=Homo sap...    40   0.005
 sp|O27351|DNAK_METTH Chaperone protein dnaK OS=Methanobacterium ...    40   0.007
 sp|O51876|ATPF_BUCAP ATP synthase B chain OS=Buchnera aphidicola...    40   0.007
 sp|Q62209|SYCP1_MOUSE Synaptonemal complex protein 1 OS=Mus musc...    40   0.009
 sp|Q15149|PLEC1_HUMAN Plectin-1 OS=Homo sapiens GN=PLEC1 PE=1 SV=3     40   0.009
 sp|Q9JI55|PLEC1_CRIGR Plectin-1 (Fragment) OS=Cricetulus griseus...    40   0.009
 sp|Q03410|SYCP1_RAT Synaptonemal complex protein 1 OS=Rattus nor...    39   0.012
 
 >sp|P31853|ATPX_SPIOL ATP synthase B' chain, chloroplastic
 OS=Spinacia oleracea GN=ATPG PE=1 SV=2
 Length = 222
 
 Score =  126 bits (316), Expect = 7e-29
 Identities = 58/116 (50%), Positives = 90/116 (77%)
 Frame = +2
 
 Query: 2   DNIWFKPVAKVMDDRDEAIRQKLMSVRDNSDEIKKLQEQAEAILKAARAETTAELNKMKR 181
 D I++ P+   MD RD +I+++L  V+D S E+K+L+EQA A+++AARAE +A LNKMK+
 Sbjct: 105 DKIYYTPLGDFMDKRDASIKEQLSGVKDTSSEVKQLEEQANAVMRAARAEISAALNKMKK 164
 
 Query: 182 ETAAKLDAKLQESRERIEKELAEAIANLEVQKQETLKSLDKEVQDLSEEIIAKVIP 349
 ET  +++AKL E R++IE EL EA+ +LE QK++T+KSLD ++  LS++I+ KV+P
 Sbjct: 165 ETQLEVEAKLAEGRKKIEVELQEALGSLEQQKEDTIKSLDSQISALSDDIVKKVLP 220
 
 
 >sp|P48085|ATPX_CYAPA ATP synthase B' chain, cyanelle OS=Cyanophora
 paradoxa GN=atpG PE=3 SV=1
 Length = 164
 
 Score = 70.5 bits (171), Expect = 5e-12
 Identities = 38/117 (32%), Positives = 65/117 (55%)
 Frame = +2
 
 Query: 8   IWFKPVAKVMDDRDEAIRQKLMSVRDNSDEIKKLQEQAEAILKAARAETTAELNKMKRET 187
 +++KP+ K++D+R E I+           +  +L  Q E  +  AR   +   N  + E
 Sbjct: 45  VFYKPLIKILDERKEYIQSNFNEAEKCLAQAAELTTQYETKITDARQNASKLTNTTRSEI 104
 
 Query: 188 AAKLDAKLQESRERIEKELAEAIANLEVQKQETLKSLDKEVQDLSEEIIAKVIPFKI 358
 +  KL+E++++ + ELA A   LE+QK E LKSL+ EVQ LS +I+ K++  +I
 Sbjct: 105 QRFVSEKLEEAQKKADSELASATNKLELQKDEALKSLESEVQTLSTKILEKLLGIQI 161
 
 
 >sp|Q05367|ATPX_SYNP1 ATP synthase B' chain OS=Synechococcus sp.
 (strain PCC 6716) GN=atpG PE=3 SV=1
 Length = 159
 
 Score = 68.6 bits (166), Expect = 2e-11
 Identities = 34/111 (30%), Positives = 65/111 (58%)
 Frame = +2
 
 Query: 14  FKPVAKVMDDRDEAIRQKLMSVRDNSDEIKKLQEQAEAILKAARAETTAELNKMKRETAA 193
 +KP+ + +D+RDE IR  L   ++   +  +L  Q E  L   R E  A + + + E
 Sbjct: 48  YKPLGQALDNRDEYIRTNLQQAKERLQQATELANQYEQELAYTRREAQAIIEEARAEAQK 107
 
 Query: 194 KLDAKLQESRERIEKELAEAIANLEVQKQETLKSLDKEVQDLSEEIIAKVI 346
 A++  +++ ++ EL +A A ++ QKQ TL++L+ +V  LSE+++AK++
 Sbjct: 108 IATAEIAAAQQALQAELMKAQAEIDQQKQATLQALEGQVSSLSEQLLAKLL 158
 
 
 >sp|Q1XDP2|ATPX_PORYE ATP synthase B' chain, chloroplastic
 OS=Porphyra yezoensis GN=atpG PE=3 SV=1
 Length = 156
 
 Score = 66.6 bits (161), Expect = 7e-11
 Identities = 37/115 (32%), Positives = 65/115 (56%)
 Frame = +2
 
 Query: 2   DNIWFKPVAKVMDDRDEAIRQKLMSVRDNSDEIKKLQEQAEAILKAARAETTAELNKMKR 181
 + I++KPV KV+D+RDE IR  L +      +  +L  + E  L  AR     ++   ++
 Sbjct: 38  NTIFYKPVTKVLDERDEYIRTTLTTASSMLVKADELAAKYEEDLSEARRNAQLKIASSQK 97
 
 Query: 182 ETAAKLDAKLQESRERIEKELAEAIANLEVQKQETLKSLDKEVQDLSEEIIAKVI 346
 E    +   +++++   EK +AEA   L VQK+E LK+L+ +V  LS++I  K++
 Sbjct: 98  EAQNIVSEDIKKAQLNAEKLIAEASKQLNVQKEEALKTLENQVDTLSDQIKVKLL 152
 
 
 >sp|P51245|ATPX_PORPU ATP synthase B' chain, chloroplastic
 OS=Porphyra purpurea GN=atpG PE=3 SV=1
 Length = 158
 
 Score = 66.6 bits (161), Expect = 7e-11
 Identities = 34/115 (29%), Positives = 67/115 (58%)
 Frame = +2
 
 Query: 2   DNIWFKPVAKVMDDRDEAIRQKLMSVRDNSDEIKKLQEQAEAILKAARAETTAELNKMKR 181
 + I++KPV K++D+RDE IR  L +      +  +L  + E  L  AR +  A++   ++
 Sbjct: 38  NTIFYKPVTKILDERDEYIRTTLTTASSMLVKADELAAKYEEDLSKARRDAQAKIAASQK 97
 
 Query: 182 ETAAKLDAKLQESRERIEKELAEAIANLEVQKQETLKSLDKEVQDLSEEIIAKVI 346
 +  + +   +++++   EK + EA   L +QK+E LK+L+ +V  LS++I  K++
 Sbjct: 98  DAQSIVSEDIKKAQMNAEKLITEASKQLNIQKEEALKTLEDQVDTLSDQIKTKLL 152
 
 
 >sp|P21904|ATPF_PROMO ATP synthase B chain, sodium ion specific
 OS=Propionigenium modestum GN=atpF PE=1 SV=2
 Length = 168
 
 Score = 60.1 bits (144), Expect = 6e-09
 Identities = 34/114 (29%), Positives = 60/114 (52%)
 Frame = +2
 
 Query: 17  KPVAKVMDDRDEAIRQKLMSVRDNSDEIKKLQEQAEAILKAARAETTAELNKMKRETAAK 196
 KP+AKV+D R E I   L     + +   K   +A+ I+K+A+ E    L + +++   +
 Sbjct: 35  KPIAKVLDARKEKIANDLKQAEIDKEMAAKANGEAQGIVKSAKTEANEMLLRAEKKADER 94
 
 Query: 197 LDAKLQESRERIEKELAEAIANLEVQKQETLKSLDKEVQDLSEEIIAKVIPFKI 358
 +  L+E+  + EK L  A   +E  K++  K L  EV DL+ ++  K+I  K+
 Sbjct: 95  KETILKEANTQREKMLKSAEVEIEKMKEQARKELQLEVTDLAVKLAEKMINEKV 148
 
 
 >sp|P08446|ATPX_SYNP6 ATP synthase B' chain OS=Synechococcus sp.
 (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=atpG
 PE=3 SV=1
 Length = 158
 
 Score = 59.7 bits (143), Expect = 8e-09
 Identities = 32/113 (28%), Positives = 61/113 (53%)
 Frame = +2
 
 Query: 8   IWFKPVAKVMDDRDEAIRQKLMSVRDNSDEIKKLQEQAEAILKAARAETTAELNKMKRET 187
 +++KP  KV+DDRD+ +R      +    E+K L  Q E  L A R ++ A + + + E
 Sbjct: 43  VFYKPFGKVLDDRDQFVRGGRQDAKARLAEVKALTAQYEQELAATRKQSQALIAEAQTEA 102
 
 Query: 188 AAKLDAKLQESRERIEKELAEAIANLEVQKQETLKSLDKEVQDLSEEIIAKVI 346
 +L E++   + +  +A   ++ QK   L++LD++V  LS +I+ K++
 Sbjct: 103 GRIAAQQLAEAQREAQAQREQAQQEIDQQKAVALQALDQQVDALSHQILDKLL 155
 
 
 >sp|O78478|ATPX_GUITH ATP synthase B' chain, chloroplastic
 OS=Guillardia theta GN=atpG PE=3 SV=1
 Length = 163
 
 Score = 59.3 bits (142), Expect = 1e-08
 Identities = 32/113 (28%), Positives = 66/113 (58%)
 Frame = +2
 
 Query: 8   IWFKPVAKVMDDRDEAIRQKLMSVRDNSDEIKKLQEQAEAILKAARAETTAELNKMKRET 187
 +++ PVAKV+D+R+E IR+ L    D   + + + +Q E  L   R E    ++  ++E
 Sbjct: 45  VFYNPVAKVLDEREEYIRKNLTQASDILAKAEAITKQYEKDLAQERREAQLIISVAQKEA 104
 
 Query: 188 AAKLDAKLQESRERIEKELAEAIANLEVQKQETLKSLDKEVQDLSEEIIAKVI 346
 +  +++++++  E  + EA + L  QKQ+ L +L+ +V  L+E+I +K++
 Sbjct: 105 QDIVALEIKQAQKDTELLVNEATSQLNSQKQKALSALEDQVNTLTEQIKSKLL 157
 
 
 >sp|P27183|ATPX_SYNY3 ATP synthase B' chain OS=Synechocystis sp.
 (strain PCC 6803) GN=atpG PE=3 SV=1
 Length = 143
 
 Score = 57.8 bits (138), Expect = 3e-08
 Identities = 31/113 (27%), Positives = 61/113 (53%)
 Frame = +2
 
 Query: 8   IWFKPVAKVMDDRDEAIRQKLMSVRDNSDEIKKLQEQAEAILKAARAETTAELNKMKRET 187
 I++KP+ KV+D+R + IR      R+   + K + ++ E  +  AR ++ A +   + E
 Sbjct: 25  IFYKPMNKVLDERADYIRTNEEDARERLAKAKAITQEYEQQITDARRQSQAVIADAQAEA 84
 
 Query: 188 AAKLDAKLQESRERIEKELAEAIANLEVQKQETLKSLDKEVQDLSEEIIAKVI 346
 K+ E++   +++   A   +E Q+Q  L SL++EV  LS +I+ K++
 Sbjct: 85  RRLAAEKIAEAQRESQRQKETAAQEIEAQRQSALSSLEQEVAALSNQILHKLL 137
 
 
 >sp|Q9TM29|ATPX_CYACA ATP synthase B' chain, chloroplastic
 OS=Cyanidium caldarium GN=atpG PE=3 SV=1
 Length = 157
 
 Score = 55.8 bits (133), Expect = 1e-07
 Identities = 29/115 (25%), Positives = 69/115 (60%)
 Frame = +2
 
 Query: 2   DNIWFKPVAKVMDDRDEAIRQKLMSVRDNSDEIKKLQEQAEAILKAARAETTAELNKMKR 181
 D  ++KP+ KV+ DR+  I + L S    S++ K+   + E ++  ++ E+   ++ +K
 Sbjct: 39  DITFYKPINKVLKDRENYILKTLESATQISEKTKETLARYEEVILKSKKESQQLIDSIKT 98
 
 Query: 182 ETAAKLDAKLQESRERIEKELAEAIANLEVQKQETLKSLDKEVQDLSEEIIAKVI 346
 +T   +  +L +++    + ++++I  L  +K++TLK L+++ ++LS++I  K+I
 Sbjct: 99  KTEHDIVNELIQTQNSTREFISKSIKELYRKKEQTLKVLEEDTENLSDKIYLKLI 153
 
 
 
 | 
  
    | TrEMBL  (release 39.9) | Link to BlastX Result : TrEMBL | 
  
    | tr_hit_id | A9T949 | 
  
    | Definition | tr|A9T949|A9T949_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens | 
  
    | Align length | 119 | 
  
    | Score (bit) | 175.0 | 
  
    | E-value | 1.0e-42 | 
  
    | Report |  |