DK954824 |
Clone id |
TST39A01NGRL0021_H16 |
Library |
TST39 |
Length |
601 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0021_H16. 5' end sequence. |
Accession |
DK954824 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL43Contig1 |
Sequence |
CTGCTATGTGCCACAGCAATGGCACTCTTCTATGAGGGGTTTTCAGCCAATACCTTCTCC ACAGAACATTGGTGCGCATGGGAATGGTGCCCCACCGCTGCCTGGTAGTGGACCTGGACG CTTTCAGAACTTTCCAAGAGTGCATTCTGCTCCTAACATGTCTGGAAGAGTTTTAAAAGG GTGTTCAGTTAAAGGTGGCTCAACAGGGAGCAACTGGAGGGCTAAGGATGTCTCAAAAGG ACAGAATAAGGGTGATGGGCCTGTCAACAGTGCTCTTCCAGAGGCCTGTGGTGACTCTTT TCTAAAACCATCAGTAATAGAATCCAAAGTGCTCCCTGTTCAGGAAGGTGGAGAGGTACG TATCACTCATCGCTCATTCCAGAGCAGCTATGCAGCTCAGTCAACAGGAGTGATTACAAC AAGGATGACTTTCAAGTATCGTATGAGGCAGCCAAGTTTTTCATAATTAAGTCGTATAGC GAAGATGATGTGCACAAAAGTATTAAATACAGTGTGTGGTCAAGTACGCCAAATGGAAAC AAACGATTGGACGAAGCTTACAGGGAAAGGCTCAGGAGAAATCAGAGGCACCTTCAACCT T |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q5RFL8 |
Definition |
sp|Q5RFL8|YTHD3_PONAB YTH domain family protein 3 OS=Pongo abelii |
Align length |
52 |
Score (bit) |
73.6 |
E-value |
7.0e-13 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q9ZVU7 |
Definition |
tr|Q9ZVU7|Q9ZVU7_ARATH T5A14.10 protein OS=Arabidopsis thaliana |
Align length |
64 |
Score (bit) |
94.0 |
E-value |
6.0e-18 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK954824|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0021_H16, 5' (588 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q9ZVU7|Q9ZVU7_ARATH T5A14.10 protein OS=Arabidopsis thaliana ... 94 6e-18 tr|Q94A30|Q94A30_ARATH At1g55500/T5A14_10 OS=Arabidopsis thalian... 94 6e-18 tr|A7NVV9|A7NVV9_VITVI Chromosome chr5 scaffold_2, whole genome ... 92 3e-17 tr|A5AJP6|A5AJP6_VITVI Putative uncharacterized protein OS=Vitis... 92 3e-17 tr|Q8H8C1|Q8H8C1_ORYSJ Putative RNA-binding protein (Putative un... 91 5e-17 tr|Q10RI5|Q10RI5_ORYSJ YT521-B-like family protein, expressed OS... 91 5e-17 tr|Q10RI4|Q10RI4_ORYSJ Os03g0158500 protein OS=Oryza sativa subs... 91 5e-17 tr|Q10RI3|Q10RI3_ORYSJ YT521-B-like family protein, expressed OS... 91 5e-17 tr|Q10RI2|Q10RI2_ORYSJ YT521-B-like family protein, expressed OS... 91 5e-17 tr|B8ANU7|B8ANU7_ORYSI Putative uncharacterized protein OS=Oryza... 91 5e-17 tr|Q9FNR2|Q9FNR2_ARATH Similarity to unknown protein (Putative u... 91 6e-17 tr|Q93ZP1|Q93ZP1_ARATH AT5g61020/maf19_20 OS=Arabidopsis thalian... 91 6e-17 tr|Q9LJE5|Q9LJE5_ARATH Gb|AAD10646.1 (AT3g13460/MRP15_10) OS=Ara... 90 8e-17 tr|Q8W311|Q8W311_ORYSA Putative RNA-binding protein OS=Oryza sat... 90 8e-17 tr|Q8H0S7|Q8H0S7_ARATH Putative uncharacterized protein At3g1346... 90 8e-17 tr|Q3MK93|Q3MK93_ARATH Putative uncharacterized protein OS=Arabi... 90 8e-17 tr|Q3EB70|Q3EB70_ARATH Uncharacterized protein At3g13460.2 OS=Ar... 90 8e-17 tr|Q2V3W3|Q2V3W3_ARATH Uncharacterized protein At3g13460.3 OS=Ar... 90 8e-17 tr|Q2V3W2|Q2V3W2_ARATH Uncharacterized protein At3g13460.4 OS=Ar... 90 8e-17 tr|Q10CW7|Q10CW7_ORYSJ Os03g0748000 protein OS=Oryza sativa subs... 90 8e-17 tr|B8AJV8|B8AJV8_ORYSI Putative uncharacterized protein OS=Oryza... 90 8e-17 tr|B4FF64|B4FF64_MAIZE Putative uncharacterized protein OS=Zea m... 90 8e-17 tr|A9PJU2|A9PJU2_POPJC Putative uncharacterized protein OS=Popul... 90 8e-17 tr|A7P0B6|A7P0B6_VITVI Chromosome chr6 scaffold_3, whole genome ... 90 8e-17 tr|A3AMP0|A3AMP0_ORYSJ Putative uncharacterized protein OS=Oryza... 90 8e-17 tr|A2Q5N8|A2Q5N8_MEDTR YT521-B-like protein OS=Medicago truncatu... 90 8e-17 tr|A7QMM3|A7QMM3_VITVI Chromosome chr19 scaffold_126, whole geno... 90 1e-16 tr|A5ACY6|A5ACY6_VITVI Putative uncharacterized protein OS=Vitis... 90 1e-16 tr|Q56XH8|Q56XH8_ARATH Putative uncharacterized protein At1g0981... 89 1e-16 tr|O04503|O04503_ARATH F21M12.20 protein OS=Arabidopsis thaliana... 89 1e-16
>tr|Q9ZVU7|Q9ZVU7_ARATH T5A14.10 protein OS=Arabidopsis thaliana GN=T5A14.10 PE=4 SV=1 Length = 580
Score = 94.0 bits (232), Expect = 6e-18 Identities = 42/64 (65%), Positives = 53/64 (82%) Frame = +1
Query: 391 CSSVNRSDYNKDDFQVSYEAAKFFIIKSYSEDDVHKSIKYSVWSSTPNGNKRLDEAYRER 570 C +R + N+DDF V Y+ AKFFIIKSYSEDDVHKSIKY+VW+STPNGNK+LD AY+E Sbjct: 381 CVLPDREECNRDDFPVEYKDAKFFIIKSYSEDDVHKSIKYNVWASTPNGNKKLDAAYQEA 440
Query: 571 LRRN 582 +++ Sbjct: 441 QQKS 444
>tr|Q94A30|Q94A30_ARATH At1g55500/T5A14_10 OS=Arabidopsis thaliana GN=At1g55500 PE=2 SV=1 Length = 549
Score = 94.0 bits (232), Expect = 6e-18 Identities = 42/64 (65%), Positives = 53/64 (82%) Frame = +1
Query: 391 CSSVNRSDYNKDDFQVSYEAAKFFIIKSYSEDDVHKSIKYSVWSSTPNGNKRLDEAYRER 570 C +R + N+DDF V Y+ AKFFIIKSYSEDDVHKSIKY+VW+STPNGNK+LD AY+E Sbjct: 338 CVLPDREECNRDDFPVEYKDAKFFIIKSYSEDDVHKSIKYNVWASTPNGNKKLDAAYQEA 397
Query: 571 LRRN 582 +++ Sbjct: 398 QQKS 401
>tr|A7NVV9|A7NVV9_VITVI Chromosome chr5 scaffold_2, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00019682001 PE=4 SV=1 Length = 416
Score = 91.7 bits (226), Expect = 3e-17 Identities = 41/54 (75%), Positives = 46/54 (85%) Frame = +1
Query: 415 YNKDDFQVSYEAAKFFIIKSYSEDDVHKSIKYSVWSSTPNGNKRLDEAYRERLR 576 YNKDDF V Y AKFF+IKSYSEDDVHKSIKY+VWSSTPNGNK+L+ AY + R Sbjct: 65 YNKDDFPVDYVDAKFFVIKSYSEDDVHKSIKYNVWSSTPNGNKKLENAYEDAQR 118
>tr|A5AJP6|A5AJP6_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_038412 PE=4 SV=1 Length = 1960
Score = 91.7 bits (226), Expect = 3e-17 Identities = 41/54 (75%), Positives = 46/54 (85%) Frame = +1
Query: 415 YNKDDFQVSYEAAKFFIIKSYSEDDVHKSIKYSVWSSTPNGNKRLDEAYRERLR 576 YNKDDF V Y AKFF+IKSYSEDDVHKSIKY+VWSSTPNGNK+L+ AY + R Sbjct: 373 YNKDDFPVDYVDAKFFVIKSYSEDDVHKSIKYNVWSSTPNGNKKLENAYEDAQR 426
>tr|Q8H8C1|Q8H8C1_ORYSJ Putative RNA-binding protein (Putative uncharacterized protein) OS=Oryza sativa subsp. japonica GN=OJ1134F05.8 PE=4 SV=1 Length = 716
Score = 90.9 bits (224), Expect = 5e-17 Identities = 38/62 (61%), Positives = 52/62 (83%) Frame = +1
Query: 403 NRSDYNKDDFQVSYEAAKFFIIKSYSEDDVHKSIKYSVWSSTPNGNKRLDEAYRERLRRN 582 +R+ +N+DDF V Y+ AKFF+IKSYSEDD+HKSIKY+VW+ST NGNK+LD AY+E ++ Sbjct: 457 DRTQFNRDDFPVQYDDAKFFVIKSYSEDDIHKSIKYNVWASTTNGNKKLDAAYQEAQAKS 516
Query: 583 QR 588 + Sbjct: 517 SK 518
>tr|Q10RI5|Q10RI5_ORYSJ YT521-B-like family protein, expressed OS=Oryza sativa subsp. japonica GN=LOC_Os03g06240 PE=4 SV=1 Length = 648
Score = 90.9 bits (224), Expect = 5e-17 Identities = 38/62 (61%), Positives = 52/62 (83%) Frame = +1
Query: 403 NRSDYNKDDFQVSYEAAKFFIIKSYSEDDVHKSIKYSVWSSTPNGNKRLDEAYRERLRRN 582 +R+ +N+DDF V Y+ AKFF+IKSYSEDD+HKSIKY+VW+ST NGNK+LD AY+E ++ Sbjct: 448 DRTQFNRDDFPVQYDDAKFFVIKSYSEDDIHKSIKYNVWASTTNGNKKLDAAYQEAQAKS 507
Query: 583 QR 588 + Sbjct: 508 SK 509
>tr|Q10RI4|Q10RI4_ORYSJ Os03g0158500 protein OS=Oryza sativa subsp. japonica GN=Os03g0158500 PE=4 SV=1 Length = 707
Score = 90.9 bits (224), Expect = 5e-17 Identities = 38/62 (61%), Positives = 52/62 (83%) Frame = +1
Query: 403 NRSDYNKDDFQVSYEAAKFFIIKSYSEDDVHKSIKYSVWSSTPNGNKRLDEAYRERLRRN 582 +R+ +N+DDF V Y+ AKFF+IKSYSEDD+HKSIKY+VW+ST NGNK+LD AY+E ++ Sbjct: 448 DRTQFNRDDFPVQYDDAKFFVIKSYSEDDIHKSIKYNVWASTTNGNKKLDAAYQEAQAKS 507
Query: 583 QR 588 + Sbjct: 508 SK 509
>tr|Q10RI3|Q10RI3_ORYSJ YT521-B-like family protein, expressed OS=Oryza sativa subsp. japonica GN=LOC_Os03g06240 PE=4 SV=1 Length = 708
Score = 90.9 bits (224), Expect = 5e-17 Identities = 38/62 (61%), Positives = 52/62 (83%) Frame = +1
Query: 403 NRSDYNKDDFQVSYEAAKFFIIKSYSEDDVHKSIKYSVWSSTPNGNKRLDEAYRERLRRN 582 +R+ +N+DDF V Y+ AKFF+IKSYSEDD+HKSIKY+VW+ST NGNK+LD AY+E ++ Sbjct: 449 DRTQFNRDDFPVQYDDAKFFVIKSYSEDDIHKSIKYNVWASTTNGNKKLDAAYQEAQAKS 508
Query: 583 QR 588 + Sbjct: 509 SK 510
>tr|Q10RI2|Q10RI2_ORYSJ YT521-B-like family protein, expressed OS=Oryza sativa subsp. japonica GN=LOC_Os03g06240 PE=4 SV=1 Length = 620
Score = 90.9 bits (224), Expect = 5e-17 Identities = 38/62 (61%), Positives = 52/62 (83%) Frame = +1
Query: 403 NRSDYNKDDFQVSYEAAKFFIIKSYSEDDVHKSIKYSVWSSTPNGNKRLDEAYRERLRRN 582 +R+ +N+DDF V Y+ AKFF+IKSYSEDD+HKSIKY+VW+ST NGNK+LD AY+E ++ Sbjct: 361 DRTQFNRDDFPVQYDDAKFFVIKSYSEDDIHKSIKYNVWASTTNGNKKLDAAYQEAQAKS 420
Query: 583 QR 588 + Sbjct: 421 SK 422
>tr|B8ANU7|B8ANU7_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_10095 PE=4 SV=1 Length = 707
Score = 90.9 bits (224), Expect = 5e-17 Identities = 38/62 (61%), Positives = 52/62 (83%) Frame = +1
Query: 403 NRSDYNKDDFQVSYEAAKFFIIKSYSEDDVHKSIKYSVWSSTPNGNKRLDEAYRERLRRN 582 +R+ +N+DDF V Y+ AKFF+IKSYSEDD+HKSIKY+VW+ST NGNK+LD AY+E ++ Sbjct: 448 DRAQFNRDDFPVQYDDAKFFVIKSYSEDDIHKSIKYNVWASTTNGNKKLDAAYQEAQAKS 507
Query: 583 QR 588 + Sbjct: 508 SK 509
|