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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK954847
Clone id TST39A01NGRL0021_I15
Library
Length 353
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0021_I15. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
GGAAACCGTGGGATGGAAGGGCCTATTTAAAGGAACAGAGGGAGAGGATAGAGGAAAGCG
AAGTAAGTCACAGAAGAGAGTGAGATTGGCAGTTCTGTGAGCCAGTGGTAGTGCCAGATA
GTGCGTGTGTGTCCACGAGGGCAAAGTAAGACTAGAGATGGAAGGCAGTAGAAGCAGCAG
CTCCAGGGTGGTGGCGGCTCTAGTGGTTGTGATGGTGGTGGCGGGCAGTCTTGCCGAGAG
GGGGGAGGCTGCAATCTCGTGCGGGACAGTGCGAGGCAAGCTGCTTCCGTGTGCAGGCTA
CCTTACAGGAACCTCGTCGGCGCCTTCACGGTCGTCGACGTGCTGCAGCGGGG
■■Homology search results ■■ -
sp_hit_id Q2QYL3
Definition sp|Q2QYL3|NLTP3_ORYSJ Non-specific lipid-transfer protein 3 OS=Oryza sativa subsp. japonica
Align length 33
Score (bit) 38.9
E-value 0.008
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK954847|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0021_I15, 5'
         (340 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q2QYL3|NLTP3_ORYSJ Non-specific lipid-transfer protein 3 OS=O...    39   0.008
sp|A2ZAS9|NLTP3_ORYSI Non-specific lipid-transfer protein 3 OS=O...    39   0.008
sp|A0AT30|NLTP3_LENCU Non-specific lipid-transfer protein 3 OS=L...    38   0.018
sp|A0AT28|NLTP1_LENCU Non-specific lipid-transfer protein 1 OS=L...    37   0.040
sp|Q9LLR7|NLTP3_ARATH Non-specific lipid-transfer protein 3 OS=A...    36   0.068
sp|Q42615|NLTP2_BRANA Non-specific lipid-transfer protein 2 OS=B...    36   0.068
sp|Q42616|NLTP3_BRANA Non-specific lipid-transfer protein 3 OS=B...    35   0.089
sp|P19656|NLTP_MAIZE Non-specific lipid-transfer protein OS=Zea ...    35   0.15 
sp|Q42642|NLTPB_BRAOT Non-specific lipid-transfer protein B OS=B...    35   0.15 
sp|Q42614|NLTP1_BRANA Non-specific lipid-transfer protein 1 OS=B...    35   0.15 
sp|A0AT31|NLTP5_LENCU Non-specific lipid-transfer protein 5 OS=L...    34   0.20 
sp|P10976|NLTP_SPIOL Non-specific lipid-transfer protein OS=Spin...    34   0.26 
sp|Q43871|NLTP8_HORVU Non-specific lipid-transfer protein Cw18 O...    34   0.26 
sp|Q43304|NLTPD_BRAOT Non-specific lipid-transfer protein D OS=B...    33   0.34 
sp|Q9ZUK6|NLTP7_ARATH Non-specific lipid-transfer protein 7 OS=A...    33   0.44 
sp|Q9LDB4|NLTP6_ARATH Non-specific lipid-transfer protein 6 OS=A...    33   0.44 
sp|Q9LLR6|NLTP4_ARATH Non-specific lipid-transfer protein 4 OS=A...    33   0.44 
sp|P27631|NLTP_DAUCA Non-specific lipid-transfer protein OS=Dauc...    33   0.58 
sp|P10975|NLTPC_RICCO Non-specific lipid-transfer protein C, cot...    33   0.58 
sp|P23802|NLTP_ELECO Non-specific lipid-transfer protein OS=Eleu...    32   0.98 
sp|Q43748|NLTP_BETVU Non-specific lipid-transfer protein OS=Beta...    32   0.98 
sp|Q43119|NLTPD_RICCO Non-specific lipid-transfer protein D, cot...    32   0.98 
sp|Q42641|NLTPA_BRAOT Non-specific lipid-transfer protein A OS=B...    32   0.98 
sp|A0AT32|NLTP6_LENCU Non-specific lipid-transfer protein 6 OS=L...    32   0.98 
sp|A0AT33|NLTP4_LENCU Non-specific lipid-transfer protein 4 (Fra...    32   0.98 
sp|Q43194|NLTP2_SORBI Non-specific lipid-transfer protein 2 OS=S...    32   0.98 
sp|A0AT29|NLTP2_LENCU Non-specific lipid-transfer protein 2 OS=L...    32   0.98 
sp|Q41073|NLTP_PINTA Non-specific lipid-transfer protein OS=Pinu...    32   1.3  
sp|Q43766|NLTP3_HORVU Non-specific lipid-transfer protein 3 OS=H...    31   1.7  
sp|Q42842|NLT43_HORVU Non-specific lipid-transfer protein 4.3 OS...    31   1.7  

>sp|Q2QYL3|NLTP3_ORYSJ Non-specific lipid-transfer protein 3
           OS=Oryza sativa subsp. japonica GN=LTP110-A PE=2 SV=1
          Length = 121

 Score = 38.9 bits (89), Expect = 0.008
 Identities = 16/33 (48%), Positives = 20/33 (60%)
 Frame = +2

Query: 236 ERGEAAISCGTVRGKLLPCAGYLTGTSSAPSRS 334
           ER  AA+SCG V   + PC  Y+ G  S+PS S
Sbjct: 24  ERASAAVSCGDVTSSIAPCLSYVMGRESSPSSS 56


>sp|A2ZAS9|NLTP3_ORYSI Non-specific lipid-transfer protein 3
           OS=Oryza sativa subsp. indica GN=LTP110-A PE=2 SV=1
          Length = 121

 Score = 38.9 bits (89), Expect = 0.008
 Identities = 16/33 (48%), Positives = 20/33 (60%)
 Frame = +2

Query: 236 ERGEAAISCGTVRGKLLPCAGYLTGTSSAPSRS 334
           ER  AA+SCG V   + PC  Y+ G  S+PS S
Sbjct: 24  ERASAAVSCGDVTSSIAPCLSYVMGRESSPSSS 56


>sp|A0AT30|NLTP3_LENCU Non-specific lipid-transfer protein 3 OS=Lens
           culinaris PE=3 SV=1
          Length = 118

 Score = 37.7 bits (86), Expect = 0.018
 Identities = 16/22 (72%), Positives = 17/22 (77%)
 Frame = +2

Query: 245 EAAISCGTVRGKLLPCAGYLTG 310
           EAA+SCGTV G L PC  YLTG
Sbjct: 24  EAAVSCGTVTGDLAPCIPYLTG 45


>sp|A0AT28|NLTP1_LENCU Non-specific lipid-transfer protein 1 OS=Lens
           culinaris PE=3 SV=1
          Length = 118

 Score = 36.6 bits (83), Expect = 0.040
 Identities = 16/22 (72%), Positives = 17/22 (77%)
 Frame = +2

Query: 245 EAAISCGTVRGKLLPCAGYLTG 310
           EAAISCGTV G L+PC  YL G
Sbjct: 24  EAAISCGTVSGALVPCLTYLKG 45


>sp|Q9LLR7|NLTP3_ARATH Non-specific lipid-transfer protein 3
           OS=Arabidopsis thaliana GN=LTP3 PE=2 SV=1
          Length = 115

 Score = 35.8 bits (81), Expect = 0.068
 Identities = 16/27 (59%), Positives = 18/27 (66%)
 Frame = +2

Query: 245 EAAISCGTVRGKLLPCAGYLTGTSSAP 325
           +AAISCGTV G L PCA YL+     P
Sbjct: 22  DAAISCGTVAGSLAPCATYLSKGGLVP 48


>sp|Q42615|NLTP2_BRANA Non-specific lipid-transfer protein 2
           OS=Brassica napus GN=LTP2 PE=3 SV=1
          Length = 117

 Score = 35.8 bits (81), Expect = 0.068
 Identities = 15/26 (57%), Positives = 17/26 (65%)
 Frame = +2

Query: 248 AAISCGTVRGKLLPCAGYLTGTSSAP 325
           AA+SCGTV G + PC GYLT     P
Sbjct: 25  AALSCGTVSGYVAPCIGYLTQNGPLP 50


>sp|Q42616|NLTP3_BRANA Non-specific lipid-transfer protein 3
           OS=Brassica napus GN=LTP3 PE=3 SV=1
          Length = 117

 Score = 35.4 bits (80), Expect = 0.089
 Identities = 15/27 (55%), Positives = 17/27 (62%)
 Frame = +2

Query: 248 AAISCGTVRGKLLPCAGYLTGTSSAPS 328
           AA+SCGTV G L  C GYLT     P+
Sbjct: 25  AALSCGTVSGNLAACIGYLTQNGPVPT 51


>sp|P19656|NLTP_MAIZE Non-specific lipid-transfer protein OS=Zea
           mays PE=1 SV=1
          Length = 120

 Score = 34.7 bits (78), Expect = 0.15
 Identities = 15/28 (53%), Positives = 16/28 (57%)
 Frame = +2

Query: 245 EAAISCGTVRGKLLPCAGYLTGTSSAPS 328
           EAAISCG V   + PC  Y  G  S PS
Sbjct: 26  EAAISCGQVASAIAPCISYARGQGSGPS 53


>sp|Q42642|NLTPB_BRAOT Non-specific lipid-transfer protein B
           OS=Brassica oleracea var. italica GN=WAX9B PE=3 SV=1
          Length = 117

 Score = 34.7 bits (78), Expect = 0.15
 Identities = 15/26 (57%), Positives = 16/26 (61%)
 Frame = +2

Query: 248 AAISCGTVRGKLLPCAGYLTGTSSAP 325
           AA+SCGTV G L  C GYLT     P
Sbjct: 25  AALSCGTVSGNLAACIGYLTQNGPLP 50


>sp|Q42614|NLTP1_BRANA Non-specific lipid-transfer protein 1
           OS=Brassica napus GN=LTP1 PE=3 SV=1
          Length = 117

 Score = 34.7 bits (78), Expect = 0.15
 Identities = 15/26 (57%), Positives = 16/26 (61%)
 Frame = +2

Query: 248 AAISCGTVRGKLLPCAGYLTGTSSAP 325
           AA+SCGTV G L  C GYLT     P
Sbjct: 25  AALSCGTVSGNLAACIGYLTQNGPLP 50
tr_hit_id Q8S2S8
Definition tr|Q8S2S8|Q8S2S8_THEHA Non-specific lipid-transfer protein OS=Thellungiella halophila
Align length 28
Score (bit) 39.7
E-value 0.076
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK954847|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0021_I15, 5'
         (340 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q8S2S8|Q8S2S8_THEHA Non-specific lipid-transfer protein OS=Th...    40   0.076
tr|B7E4W9|B7E4W9_ORYSJ cDNA clone:001-002-F05, full insert seque...    39   0.13 
tr|Q7EZR3|Q7EZR3_ORYSJ Non-specific lipid-transfer protein OS=Or...    39   0.17 
tr|Q2XX49|Q2XX49_ZEAMP Non-specific lipid-transfer protein OS=Ze...    39   0.17 
tr|Q2XX47|Q2XX47_ZEAMP Non-specific lipid-transfer protein OS=Ze...    39   0.17 
tr|Q2XX39|Q2XX39_ZEAMP Non-specific lipid-transfer protein OS=Ze...    39   0.17 
tr|B8QW69|B8QW69_ZEAMP Lipid-transfer protein (Fragment) OS=Zea ...    39   0.17 
tr|B8QW53|B8QW53_ZEAMP Lipid-transfer protein OS=Zea mays subsp....    39   0.17 
tr|B8QW40|B8QW40_ZEAMP Lipid-transfer protein OS=Zea mays subsp....    39   0.17 
tr|B8QW37|B8QW37_ZEAMP Lipid-transfer protein OS=Zea mays subsp....    39   0.17 
tr|B8QW34|B8QW34_ZEAMP Lipid-transfer protein OS=Zea mays subsp....    39   0.17 
tr|B8QW33|B8QW33_ZEAMP Lipid-transfer protein (Fragment) OS=Zea ...    39   0.17 
tr|B8QW32|B8QW32_ZEAMP Lipid-transfer protein (Fragment) OS=Zea ...    39   0.17 
tr|B8QW30|B8QW30_ZEAMP Lipid-transfer protein (Fragment) OS=Zea ...    39   0.17 
tr|B8QW29|B8QW29_ZEAMP Lipid-transfer protein OS=Zea mays subsp....    39   0.17 
tr|A2YQX8|A2YQX8_ORYSI Non-specific lipid-transfer protein OS=Or...    39   0.17 
tr|B8QW56|B8QW56_ZEAMP Lipid-transfer protein OS=Zea mays subsp....    38   0.22 
tr|A9NY54|A9NY54_PICSI Non-specific lipid-transfer protein OS=Pi...    38   0.29 
tr|A9NLY0|A9NLY0_PICSI Non-specific lipid-transfer protein OS=Pi...    38   0.29 
tr|A9NL65|A9NL65_PICSI Non-specific lipid-transfer protein OS=Pi...    38   0.29 
tr|B8QWA1|B8QWA1_ZEAMP Lipid-transfer protein (Fragment) OS=Zea ...    37   0.38 
tr|B8QW95|B8QW95_ZEAMP Lipid-transfer protein OS=Zea mays subsp....    37   0.38 
tr|B8QW75|B8QW75_ZEAMP Lipid-transfer protein OS=Zea mays subsp....    37   0.38 
tr|A9NPT8|A9NPT8_PICSI Non-specific lipid-transfer protein OS=Pi...    37   0.38 
tr|Q9AXF3|Q9AXF3_AVIMR Non-specific lipid-transfer protein OS=Av...    37   0.49 
tr|Q42848|Q42848_HORVU Non-specific lipid-transfer protein OS=Ho...    37   0.49 
tr|Q2XX37|Q2XX37_ZEAMP Non-specific lipid-transfer protein OS=Ze...    37   0.49 
tr|O24583|O24583_MAIZE Non-specific lipid-transfer protein OS=Ze...    37   0.49 
tr|B8QW58|B8QW58_ZEAMP Lipid-transfer protein OS=Zea mays subsp....    37   0.49 
tr|B6T089|B6T089_MAIZE Nonspecific lipid-transfer protein 1 OS=Z...    37   0.49 

>tr|Q8S2S8|Q8S2S8_THEHA Non-specific lipid-transfer protein
           OS=Thellungiella halophila PE=3 SV=1
          Length = 112

 Score = 39.7 bits (91), Expect = 0.076
 Identities = 17/28 (60%), Positives = 20/28 (71%)
 Frame = +2

Query: 245 EAAISCGTVRGKLLPCAGYLTGTSSAPS 328
           +AAISCGTV   L PCAGYLT   + P+
Sbjct: 22  DAAISCGTVASSLAPCAGYLTKGGAVPA 49


>tr|B7E4W9|B7E4W9_ORYSJ cDNA clone:001-002-F05, full insert sequence
           OS=Oryza sativa subsp. japonica PE=2 SV=1
          Length = 121

 Score = 38.9 bits (89), Expect = 0.13
 Identities = 16/33 (48%), Positives = 20/33 (60%)
 Frame = +2

Query: 236 ERGEAAISCGTVRGKLLPCAGYLTGTSSAPSRS 334
           ER  AA+SCG V   + PC  Y+ G  S+PS S
Sbjct: 24  ERASAAVSCGDVTSSIAPCLSYVMGRESSPSSS 56


>tr|Q7EZR3|Q7EZR3_ORYSJ Non-specific lipid-transfer protein OS=Oryza
           sativa subsp. japonica GN=P0582D05.140 PE=3 SV=1
          Length = 120

 Score = 38.5 bits (88), Expect = 0.17
 Identities = 15/28 (53%), Positives = 20/28 (71%)
 Frame = +2

Query: 245 EAAISCGTVRGKLLPCAGYLTGTSSAPS 328
           + A++CG V   LLPC  YLTG ++APS
Sbjct: 26  DGAVTCGDVDASLLPCVAYLTGKAAAPS 53


>tr|Q2XX49|Q2XX49_ZEAMP Non-specific lipid-transfer protein OS=Zea
           mays subsp. parviglumis GN=plt2 PE=3 SV=1
          Length = 119

 Score = 38.5 bits (88), Expect = 0.17
 Identities = 17/30 (56%), Positives = 19/30 (63%)
 Frame = +2

Query: 245 EAAISCGTVRGKLLPCAGYLTGTSSAPSRS 334
           EAAI+CG V   + PC  Y  GT SAPS S
Sbjct: 27  EAAITCGQVSSAIAPCLSYARGTGSAPSAS 56


>tr|Q2XX47|Q2XX47_ZEAMP Non-specific lipid-transfer protein OS=Zea
           mays subsp. parviglumis GN=plt2 PE=3 SV=1
          Length = 119

 Score = 38.5 bits (88), Expect = 0.17
 Identities = 17/30 (56%), Positives = 19/30 (63%)
 Frame = +2

Query: 245 EAAISCGTVRGKLLPCAGYLTGTSSAPSRS 334
           EAAI+CG V   + PC  Y  GT SAPS S
Sbjct: 27  EAAITCGQVSSAIAPCLSYARGTGSAPSAS 56


>tr|Q2XX39|Q2XX39_ZEAMP Non-specific lipid-transfer protein OS=Zea
           mays subsp. parviglumis GN=plt2 PE=3 SV=1
          Length = 119

 Score = 38.5 bits (88), Expect = 0.17
 Identities = 17/30 (56%), Positives = 19/30 (63%)
 Frame = +2

Query: 245 EAAISCGTVRGKLLPCAGYLTGTSSAPSRS 334
           EAAI+CG V   + PC  Y  GT SAPS S
Sbjct: 27  EAAITCGQVSSAIAPCLSYARGTGSAPSAS 56


>tr|B8QW69|B8QW69_ZEAMP Lipid-transfer protein (Fragment) OS=Zea
           mays subsp. parviglumis GN=plt2 PE=4 SV=1
          Length = 109

 Score = 38.5 bits (88), Expect = 0.17
 Identities = 17/30 (56%), Positives = 19/30 (63%)
 Frame = +2

Query: 245 EAAISCGTVRGKLLPCAGYLTGTSSAPSRS 334
           EAAI+CG V   + PC  Y  GT SAPS S
Sbjct: 15  EAAITCGQVSSAIAPCLSYARGTGSAPSAS 44


>tr|B8QW53|B8QW53_ZEAMP Lipid-transfer protein OS=Zea mays subsp.
           parviglumis GN=plt2 PE=4 SV=1
          Length = 121

 Score = 38.5 bits (88), Expect = 0.17
 Identities = 17/30 (56%), Positives = 19/30 (63%)
 Frame = +2

Query: 245 EAAISCGTVRGKLLPCAGYLTGTSSAPSRS 334
           EAAI+CG V   + PC  Y  GT SAPS S
Sbjct: 27  EAAITCGQVSSAIAPCLSYARGTGSAPSAS 56


>tr|B8QW40|B8QW40_ZEAMP Lipid-transfer protein OS=Zea mays subsp.
           parviglumis GN=plt2 PE=4 SV=1
          Length = 121

 Score = 38.5 bits (88), Expect = 0.17
 Identities = 17/30 (56%), Positives = 19/30 (63%)
 Frame = +2

Query: 245 EAAISCGTVRGKLLPCAGYLTGTSSAPSRS 334
           EAAI+CG V   + PC  Y  GT SAPS S
Sbjct: 27  EAAITCGQVSSAIAPCLSYARGTGSAPSAS 56


>tr|B8QW37|B8QW37_ZEAMP Lipid-transfer protein OS=Zea mays subsp.
           parviglumis GN=plt2 PE=4 SV=1
          Length = 121

 Score = 38.5 bits (88), Expect = 0.17
 Identities = 17/30 (56%), Positives = 19/30 (63%)
 Frame = +2

Query: 245 EAAISCGTVRGKLLPCAGYLTGTSSAPSRS 334
           EAAI+CG V   + PC  Y  GT SAPS S
Sbjct: 27  EAAITCGQVSSAIAPCLSYARGTGSAPSAS 56