DK954850 |
Clone id |
TST39A01NGRL0021_I18 |
Library |
TST39 |
Length |
587 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0021_I18. 5' end sequence. |
Accession |
DK954850 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL72Contig2 |
Sequence |
GTTTTTCGGCATCTTCAGAGTCGACCAAAAGGCTCAGAAGGAAGCGAGTCCAGTGTTTGC AAGACATCTTAATTCTCCTCCTTTGCCACTTAGCTCCATGGATTGCACATTTGCGGCGCA GGCCTCTCCGCAAACAGCTGCGGCTCCCCTAGCAGCCCTCTCACACAAGTCTTCTGTTCA GATCCCGCGGGGGGCTCTCCGCTCAAACTTCTGTGTGCAGACAGGTCTTTTAAAGTTGGA TATTCAGAGAGGGATAAAGTCAAGGTTGAGGAGAAACAGGGGCAGTGTCAAGTTGGCAGT TGTTAGAGCAAGTGGTGATACTCAAGATAGTGGGTCTCCGATAGCTCCGTTCCAGCCAGA GTCTCCTACCGGTCAGTACTTGGCACAGCTTCTTCAAAGCCATCCCCATCTTGTTCCTGC TGCTGTTGAGCAAGAGCTTGAGAAGCTTGCTGAGAATCGTACTTTGCAGGATTCTTCCAC TGAGCCTAGCTCACAGGGTTCCGAGCTTGTCCTCTACAGACGGATTGCTGAGCTCAAAGA GCAGGAAAGGCAAAGAGCATTGGAAGAGATAATCTACACCCTCATTG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q8BI22 |
Definition |
sp|Q8BI22|CN145_MOUSE Uncharacterized protein C14orf145 homolog OS=Mus musculus |
Align length |
128 |
Score (bit) |
35.8 |
E-value |
0.16 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B8LPW2 |
Definition |
tr|B8LPW2|B8LPW2_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
108 |
Score (bit) |
119.0 |
E-value |
2.0e-25 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK954850|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0021_I18, 5' (587 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B8LPW2|B8LPW2_PICSI Putative uncharacterized protein OS=Picea... 119 2e-25 tr|A7QTZ7|A7QTZ7_VITVI Chromosome undetermined scaffold_174, who... 119 2e-25 tr|A9PIE4|A9PIE4_POPTR Putative uncharacterized protein OS=Popul... 111 3e-23 tr|Q9LVJ0|Q9LVJ0_ARATH Gb|AAF02142.1 (Putative uncharacterized p... 108 2e-22 tr|Q8W4L9|Q8W4L9_ARATH Putative uncharacterized protein At3g1780... 108 2e-22 tr|Q0WNF6|Q0WNF6_ARATH Putative uncharacterized protein At3g1780... 108 2e-22 tr|Q9LP80|Q9LP80_ARATH T1N15.6 (Putative uncharacterized protein... 108 3e-22 tr|Q2V4I1|Q2V4I1_ARATH Uncharacterized protein At1g48450.2 OS=Ar... 108 3e-22 tr|A9PF86|A9PF86_POPTR Putative uncharacterized protein OS=Popul... 108 3e-22 tr|A7PSL3|A7PSL3_VITVI Chromosome chr6 scaffold_28, whole genome... 101 3e-20 tr|A7PC12|A7PC12_VITVI Chromosome chr2 scaffold_11, whole genome... 100 1e-19 tr|B6TEU7|B6TEU7_MAIZE Putative uncharacterized protein OS=Zea m... 99 1e-19 tr|A5BNG8|A5BNG8_VITVI Putative uncharacterized protein OS=Vitis... 98 3e-19 tr|B7FJF5|B7FJF5_MEDTR Putative uncharacterized protein OS=Medic... 97 5e-19 tr|Q10DW0|Q10DW0_ORYSJ Os03g0717900 protein OS=Oryza sativa subs... 97 7e-19 tr|A3AM41|A3AM41_ORYSJ Putative uncharacterized protein OS=Oryza... 97 7e-19 tr|A2XLF0|A2XLF0_ORYSI Putative uncharacterized protein OS=Oryza... 97 7e-19 tr|B4G0A9|B4G0A9_MAIZE Putative uncharacterized protein OS=Zea m... 96 2e-18 tr|B6UFZ7|B6UFZ7_MAIZE Putative uncharacterized protein OS=Zea m... 90 1e-16 tr|Q10DV9|Q10DV9_ORYSJ cDNA clone:001-023-C09, full insert seque... 89 2e-16 tr|Q7X6P4|Q7X6P4_ORYSA OSJNBa0006A01.21 protein (OSJNba0093F12.3... 88 3e-16 tr|Q0JAJ2|Q0JAJ2_ORYSJ Os04g0595100 protein OS=Oryza sativa subs... 88 3e-16 tr|B8ATK2|B8ATK2_ORYSI Putative uncharacterized protein OS=Oryza... 88 3e-16 tr|Q7X9D6|Q7X9D6_MARQU ABRH7 (Fragment) OS=Marsilea quadrifolia ... 87 7e-16 tr|Q9FVR1|Q9FVR1_ARATH Putative uncharacterized protein F3C3.6 (... 84 6e-15 tr|A5BZ18|A5BZ18_VITVI Putative uncharacterized protein OS=Vitis... 77 9e-13 tr|B6TD75|B6TD75_MAIZE Putative uncharacterized protein OS=Zea m... 68 4e-10 tr|A4S3L6|A4S3L6_OSTLU Predicted protein OS=Ostreococcus lucimar... 67 6e-10 tr|Q2R4Y4|Q2R4Y4_ORYSJ Expressed protein OS=Oryza sativa subsp. ... 66 2e-09 tr|Q2R4Y3|Q2R4Y3_ORYSJ Expressed protein OS=Oryza sativa subsp. ... 66 2e-09
>tr|B8LPW2|B8LPW2_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 434
Score = 119 bits (297), Expect = 2e-25 Identities = 63/108 (58%), Positives = 78/108 (72%) Frame = +2
Query: 263 RLRRNRGSVKLAVVRASGDTQDSGSPIAPFQPESPTGQYLAQLLQSHPHLVPAAVEQELE 442 R RRN G VRA+G+ +S PIAP Q ESPTGQ+L+QLL+ HPHL+PAAVEQ+LE Sbjct: 74 RSRRNFG------VRAAGNYDESSKPIAPLQLESPTGQFLSQLLKDHPHLLPAAVEQQLE 127
Query: 443 KLAENRTLQDSSTEPSSQGSELVLYRRIAELKEQERQRALEEIIYTLI 586 +L +R PSS +ELVLYRRIAE+K ER++ALEEI+Y LI Sbjct: 128 RLVADRDAAAQQDPPSSTSTELVLYRRIAEVKAAERRKALEEIMYALI 175
>tr|A7QTZ7|A7QTZ7_VITVI Chromosome undetermined scaffold_174, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00006608001 PE=4 SV=1 Length = 362
Score = 119 bits (297), Expect = 2e-25 Identities = 61/104 (58%), Positives = 77/104 (74%), Gaps = 2/104 (1%) Frame = +2
Query: 281 GSVKLAVVRASGDTQDSGS--PIAPFQPESPTGQYLAQLLQSHPHLVPAAVEQELEKLAE 454 G K +VRAS SGS PIAP Q ESP GQ+L+Q+L SHPHLVPAAVEQ+LE+L Sbjct: 4 GCKKCTIVRASASADSSGSAAPIAPLQLESPIGQFLSQILISHPHLVPAAVEQQLEQLQT 63
Query: 455 NRTLQDSSTEPSSQGSELVLYRRIAELKEQERQRALEEIIYTLI 586 +R ++ E S+ G+ELVLYRRIAE+K ER++ALEEI+Y L+ Sbjct: 64 DRDAEEHKEESSASGTELVLYRRIAEVKANERKKALEEILYALV 107
>tr|A9PIE4|A9PIE4_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 417
Score = 111 bits (277), Expect = 3e-23 Identities = 57/106 (53%), Positives = 75/106 (70%), Gaps = 4/106 (3%) Frame = +2
Query: 281 GSVKLAVVRASGDTQDSGS----PIAPFQPESPTGQYLAQLLQSHPHLVPAAVEQELEKL 448 GS + VRAS + S PIAP Q ESP GQ+L+Q+L SHPHLVPAAVEQ+LE+L Sbjct: 59 GSRRCMAVRASSSSSSDSSGSIVPIAPLQLESPIGQFLSQILVSHPHLVPAAVEQQLEQL 118
Query: 449 AENRTLQDSSTEPSSQGSELVLYRRIAELKEQERQRALEEIIYTLI 586 +R + +PS+ G++LVLYRRIAE K +R++ALEEI+Y L+ Sbjct: 119 QTDRDSEKQKEDPSATGTDLVLYRRIAEAKANDRRKALEEILYALV 164
>tr|Q9LVJ0|Q9LVJ0_ARATH Gb|AAF02142.1 (Putative uncharacterized protein At3g17800) OS=Arabidopsis thaliana GN=At3g17800 PE=2 SV=1 Length = 421
Score = 108 bits (271), Expect = 2e-22 Identities = 58/102 (56%), Positives = 76/102 (74%), Gaps = 6/102 (5%) Frame = +2
Query: 299 VVRASGDTQDSGS-----PIAPFQPESPTGQYLAQLLQSHPHLVPAAVEQELEKLAENRT 463 VVRAS + D+ S PIAP Q +SP GQ+L+Q+L SHPHLVPAAVEQ+LE+L +R Sbjct: 73 VVRASSASNDASSGSSPKPIAPLQLQSPAGQFLSQILVSHPHLVPAAVEQQLEQLQTDRD 132
Query: 464 LQDSSTEPSS-QGSELVLYRRIAELKEQERQRALEEIIYTLI 586 Q + + +S G+++VLYRRIAELKE ER+R LEEI+Y L+ Sbjct: 133 SQGQNKDSASVPGTDIVLYRRIAELKENERRRTLEEILYALV 174
>tr|Q8W4L9|Q8W4L9_ARATH Putative uncharacterized protein At3g17800; MEB5.2 (Putative uncharacterized protein At3g17800) OS=Arabidopsis thaliana GN=At3g17800/MEB5.2 PE=2 SV=1 Length = 421
Score = 108 bits (271), Expect = 2e-22 Identities = 58/102 (56%), Positives = 76/102 (74%), Gaps = 6/102 (5%) Frame = +2
Query: 299 VVRASGDTQDSGS-----PIAPFQPESPTGQYLAQLLQSHPHLVPAAVEQELEKLAENRT 463 VVRAS + D+ S PIAP Q +SP GQ+L+Q+L SHPHLVPAAVEQ+LE+L +R Sbjct: 73 VVRASSASNDASSGSSPKPIAPLQLQSPAGQFLSQILVSHPHLVPAAVEQQLEQLQTDRD 132
Query: 464 LQDSSTEPSS-QGSELVLYRRIAELKEQERQRALEEIIYTLI 586 Q + + +S G+++VLYRRIAELKE ER+R LEEI+Y L+ Sbjct: 133 SQGQNKDSASVPGTDIVLYRRIAELKENERRRTLEEILYALV 174
>tr|Q0WNF6|Q0WNF6_ARATH Putative uncharacterized protein At3g17800 OS=Arabidopsis thaliana GN=At3g17800 PE=2 SV=1 Length = 421
Score = 108 bits (271), Expect = 2e-22 Identities = 58/102 (56%), Positives = 76/102 (74%), Gaps = 6/102 (5%) Frame = +2
Query: 299 VVRASGDTQDSGS-----PIAPFQPESPTGQYLAQLLQSHPHLVPAAVEQELEKLAENRT 463 VVRAS + D+ S PIAP Q +SP GQ+L+Q+L SHPHLVPAAVEQ+LE+L +R Sbjct: 73 VVRASSASNDASSGSSPKPIAPLQLQSPAGQFLSQILVSHPHLVPAAVEQQLEQLQTDRD 132
Query: 464 LQDSSTEPSS-QGSELVLYRRIAELKEQERQRALEEIIYTLI 586 Q + + +S G+++VLYRRIAELKE ER+R LEEI+Y L+ Sbjct: 133 SQGQNKDSASVPGTDIVLYRRIAELKENERRRTLEEILYALV 174
>tr|Q9LP80|Q9LP80_ARATH T1N15.6 (Putative uncharacterized protein At1g48450) (At1g48450/T1N15_5) OS=Arabidopsis thaliana GN=At1g48450 PE=2 SV=1 Length = 423
Score = 108 bits (269), Expect = 3e-22 Identities = 56/97 (57%), Positives = 75/97 (77%), Gaps = 1/97 (1%) Frame = +2
Query: 299 VVRASGDTQDSGSPIAPFQPESPTGQYLAQLLQSHPHLVPAAVEQELEKLAENRTLQDSS 478 VV+AS S IAP Q +SP GQ+L+Q+L SHPHLVPAAVEQ+LE+L +R ++ S Sbjct: 69 VVKASASGDASTESIAPLQLKSPVGQFLSQILVSHPHLVPAAVEQQLEQLQIDRDAEEQS 128
Query: 479 TEPSS-QGSELVLYRRIAELKEQERQRALEEIIYTLI 586 + SS G+++VLYRRIAE+KE+ER+RALEEI+Y L+ Sbjct: 129 KDASSVLGTDIVLYRRIAEVKEKERRRALEEILYALV 165
>tr|Q2V4I1|Q2V4I1_ARATH Uncharacterized protein At1g48450.2 OS=Arabidopsis thaliana GN=At1g48450 PE=4 SV=1 Length = 342
Score = 108 bits (269), Expect = 3e-22 Identities = 56/97 (57%), Positives = 75/97 (77%), Gaps = 1/97 (1%) Frame = +2
Query: 299 VVRASGDTQDSGSPIAPFQPESPTGQYLAQLLQSHPHLVPAAVEQELEKLAENRTLQDSS 478 VV+AS S IAP Q +SP GQ+L+Q+L SHPHLVPAAVEQ+LE+L +R ++ S Sbjct: 69 VVKASASGDASTESIAPLQLKSPVGQFLSQILVSHPHLVPAAVEQQLEQLQIDRDAEEQS 128
Query: 479 TEPSS-QGSELVLYRRIAELKEQERQRALEEIIYTLI 586 + SS G+++VLYRRIAE+KE+ER+RALEEI+Y L+ Sbjct: 129 KDASSVLGTDIVLYRRIAEVKEKERRRALEEILYALV 165
>tr|A9PF86|A9PF86_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 401
Score = 108 bits (269), Expect = 3e-22 Identities = 53/97 (54%), Positives = 73/97 (75%) Frame = +2
Query: 296 AVVRASGDTQDSGSPIAPFQPESPTGQYLAQLLQSHPHLVPAAVEQELEKLAENRTLQDS 475 A + +S D+ S + IAP Q ESP GQ+L+Q+L SHPHLVPAAVEQ+LE+L +R + Sbjct: 68 ASLSSSSDSSGSIASIAPLQLESPVGQFLSQILISHPHLVPAAVEQQLEQLQTDRDAEKQ 127
Query: 476 STEPSSQGSELVLYRRIAELKEQERQRALEEIIYTLI 586 EPS+ ++LVLYR+IAE+K ER++ALEEI+Y L+ Sbjct: 128 KEEPSATSTDLVLYRKIAEVKANERRKALEEILYALV 164
>tr|A7PSL3|A7PSL3_VITVI Chromosome chr6 scaffold_28, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00022976001 PE=4 SV=1 Length = 342
Score = 101 bits (252), Expect = 3e-20 Identities = 51/100 (51%), Positives = 73/100 (73%), Gaps = 4/100 (4%) Frame = +2
Query: 299 VVRASG----DTQDSGSPIAPFQPESPTGQYLAQLLQSHPHLVPAAVEQELEKLAENRTL 466 +VRAS D+ +S +PIAP + ESP G++L ++L SHPHLVPAAVE++LE+ +R Sbjct: 10 MVRASATVDNDSYESAAPIAPLRLESPIGRFLTEILISHPHLVPAAVERQLEQFQTDRDA 69
Query: 467 QDSSTEPSSQGSELVLYRRIAELKEQERQRALEEIIYTLI 586 + E S+ G EL+LYRRIA++K ER++ALEEI+Y L+ Sbjct: 70 EGHKQESSASGIELLLYRRIAKVKANERKKALEEILYVLV 109
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