DK954853 |
Clone id |
TST39A01NGRL0021_I21 |
Library |
TST39 |
Length |
470 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0021_I21. 5' end sequence. |
Accession |
DK954853 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL7Contig2 |
Sequence |
GTTGAATTGAAAGTGGCTATGAGTTGCCAAGGTTGTGTTGGTGCAGTGAAGAGGGTGCTT GGGAAGATGGAAGGGGTAAATACATATGATATAGACTTGGATGCGCAGAAAGTGACTGTG AAAGGGAACGTCAAGCCAGAGGATGTTCTTTCTACTGTTTCCAAAACTGGGAAAGCTACA TCGTTTTGGCCAAGTGAAGGAAGTACAGCATCATAGTTTTATTTGTAAATTGATTTTTGG CTATTGTGACAAGAGCTATGCTCATGAAGTGGCTGATGATTAAAAAAAACTCTTGCATAC TATACGACATATTTATGTCATGATCTTATTCCATCTTGCCAACTTGTGCGCCGTGGTATG ATTAATGATATCACTATCCTATATGACATTAGTGTGGCTTTGTACATTTCAATCCTTTTG CCCATCAAGTTGTGGTACTGCATCTTGTATAAAAAAAAAAAAAAAAAAAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9XT28 |
Definition |
sp|Q9XT28|ATOX1_SHEEP Copper transport protein ATOX1 OS=Ovis aries |
Align length |
61 |
Score (bit) |
55.1 |
E-value |
1.0e-07 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q5ZF67 |
Definition |
tr|Q5ZF67|Q5ZF67_PLAMJ Copper chaperone OS=Plantago major |
Align length |
68 |
Score (bit) |
109.0 |
E-value |
6.0e-23 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK954853|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0021_I21, 5' (450 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q5ZF67|Q5ZF67_PLAMJ Copper chaperone OS=Plantago major GN=cch... 109 6e-23 tr|A9NJS2|A9NJS2_PICSI Putative uncharacterized protein OS=Picea... 108 1e-22 tr|Q94BT9|Q94BT9_ARATH At1g66240/T6J19_6 OS=Arabidopsis thaliana... 107 3e-22 tr|A7QBE3|A7QBE3_VITVI Chromosome chr13 scaffold_74, whole genom... 107 3e-22 tr|Q6J338|Q6J338_9ROSI Copper chaperone OS=Populus alba x Populu... 106 7e-22 tr|B6SPL7|B6SPL7_MAIZE Copper chaperone OS=Zea mays PE=4 SV=1 106 7e-22 tr|A9PIL5|A9PIL5_POPJC Putative uncharacterized protein OS=Popul... 106 7e-22 tr|A9PCL8|A9PCL8_POPTR Putative uncharacterized protein OS=Popul... 106 7e-22 tr|Q9SE04|Q9SE04_ORYSA Copper chaperone homolog CCH OS=Oryza sat... 105 1e-21 tr|Q84KJ2|Q84KJ2_SOLLC Copper chaperone OS=Solanum lycopersicum ... 105 1e-21 tr|Q70DK1|Q70DK1_HORVD Chopper chaperone OS=Hordeum vulgare var.... 105 1e-21 tr|Q6H759|Q6H759_ORYSJ Os02g0530100 protein OS=Oryza sativa subs... 105 1e-21 tr|Q5QL92|Q5QL92_ORYSJ cDNA clone:001-016-H06, full insert seque... 105 1e-21 tr|B6ST82|B6ST82_MAIZE Putative uncharacterized protein OS=Zea m... 105 1e-21 tr|B6SQL3|B6SQL3_MAIZE Putative uncharacterized protein OS=Zea m... 105 1e-21 tr|B6SHX8|B6SHX8_MAIZE Putative uncharacterized protein OS=Zea m... 105 1e-21 tr|B2CM19|B2CM19_SOLCH Copper chaperone OS=Solanum chacoense PE=... 105 1e-21 tr|A2X5L0|A2X5L0_ORYSI Putative uncharacterized protein OS=Oryza... 105 1e-21 tr|A9P875|A9P875_POPTR Putative uncharacterized protein OS=Popul... 105 1e-21 tr|O82089|O82089_ARATH Copper homeostasis factor (AT3g56240/F18O... 104 2e-21 tr|B6T1K0|B6T1K0_MAIZE Copper chaperone OS=Zea mays PE=4 SV=1 103 3e-21 tr|A1ECK4|A1ECK4_9ROSI Putative copper chaperone OS=Citrus hybri... 103 6e-21 tr|Q6ZCF3|Q6ZCF3_ORYSJ Os08g0205400 protein OS=Oryza sativa subs... 101 2e-20 tr|A2YSB2|A2YSB2_ORYSI Putative uncharacterized protein OS=Oryza... 101 2e-20 tr|Q9C7U6|Q9C7U6_ARATH Copper homeostasis factor, putative; 2714... 101 2e-20 tr|A9SR07|A9SR07_PHYPA Predicted protein OS=Physcomitrella paten... 101 2e-20 tr|Q9SE03|Q9SE03_SOYBN Copper chaperone homolog CCH OS=Glycine m... 99 1e-19 tr|B7FJ81|B7FJ81_MEDTR Putative uncharacterized protein OS=Medic... 96 7e-19 tr|B2MUN5|B2MUN5_9CARY Copper chaperone protein OS=Knorringia si... 96 7e-19 tr|B5M1W7|B5M1W7_RHEAU Copper homeostasis factor OS=Rheum austra... 94 3e-18
>tr|Q5ZF67|Q5ZF67_PLAMJ Copper chaperone OS=Plantago major GN=cch1 PE=4 SV=1 Length = 109
Score = 109 bits (273), Expect = 6e-23 Identities = 52/68 (76%), Positives = 58/68 (85%) Frame = +1
Query: 1 VELKVAMSCQGCVGAVKRVLGKMEGVNTYDIDLDAQKVTVKGNVKPEDVLSTVSKTGKAT 180 VELKV MSCQGCVGAVKRVLGKMEGV ++DID++ QKVTVKGNV+ E VL TVSKTGK T Sbjct: 5 VELKVGMSCQGCVGAVKRVLGKMEGVESFDIDIEKQKVTVKGNVEKEAVLQTVSKTGKKT 64
Query: 181 SFWPSEGS 204 FWP E + Sbjct: 65 EFWPEEAA 72
>tr|A9NJS2|A9NJS2_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=4 SV=1 Length = 75
Score = 108 bits (271), Expect = 1e-22 Identities = 53/70 (75%), Positives = 57/70 (81%) Frame = +1
Query: 1 VELKVAMSCQGCVGAVKRVLGKMEGVNTYDIDLDAQKVTVKGNVKPEDVLSTVSKTGKAT 180 V LKV MSC+GCVGAVKRVL KMEGV TYD++L QKVTVKGNVKP+ VL TVSKTGK T Sbjct: 5 VVLKVGMSCEGCVGAVKRVLNKMEGVETYDVNLKEQKVTVKGNVKPDAVLQTVSKTGKET 64
Query: 181 SFWPSEGSTA 210 SFWP E A Sbjct: 65 SFWPEEKDIA 74
>tr|Q94BT9|Q94BT9_ARATH At1g66240/T6J19_6 OS=Arabidopsis thaliana GN=At1g66240 PE=4 SV=1 Length = 106
Score = 107 bits (267), Expect = 3e-22 Identities = 49/70 (70%), Positives = 61/70 (87%) Frame = +1
Query: 1 VELKVAMSCQGCVGAVKRVLGKMEGVNTYDIDLDAQKVTVKGNVKPEDVLSTVSKTGKAT 180 V L+VAM+C+GCVGAVKRVLGKMEGV ++D+D+ QKVTVKGNV+P+ VL TV+KTGK T Sbjct: 35 VVLRVAMTCEGCVGAVKRVLGKMEGVESFDVDIKEQKVTVKGNVQPDAVLQTVTKTGKKT 94
Query: 181 SFWPSEGSTA 210 +FW +EG TA Sbjct: 95 AFWEAEGETA 104
>tr|A7QBE3|A7QBE3_VITVI Chromosome chr13 scaffold_74, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00034927001 PE=4 SV=1 Length = 134
Score = 107 bits (267), Expect = 3e-22 Identities = 52/68 (76%), Positives = 58/68 (85%) Frame = +1
Query: 1 VELKVAMSCQGCVGAVKRVLGKMEGVNTYDIDLDAQKVTVKGNVKPEDVLSTVSKTGKAT 180 V LKV MSC+GCVGAVKRVLGKMEGV ++DIDL QKVTVKGNV+P+ VL TVSKTGK T Sbjct: 53 VVLKVGMSCEGCVGAVKRVLGKMEGVESFDIDLKEQKVTVKGNVQPDAVLKTVSKTGKKT 112
Query: 181 SFWPSEGS 204 SFW +E S Sbjct: 113 SFWEAEAS 120
>tr|Q6J338|Q6J338_9ROSI Copper chaperone OS=Populus alba x Populus tremula var. glandulosa GN=CCH PE=4 SV=1 Length = 85
Score = 106 bits (264), Expect = 7e-22 Identities = 51/66 (77%), Positives = 57/66 (86%) Frame = +1
Query: 1 VELKVAMSCQGCVGAVKRVLGKMEGVNTYDIDLDAQKVTVKGNVKPEDVLSTVSKTGKAT 180 V LKV MSC+GCVGAVKRVLGKMEGV +YDIDL QKVTVKGNV+P+ VL TVSKTGK T Sbjct: 5 VVLKVGMSCEGCVGAVKRVLGKMEGVESYDIDLKEQKVTVKGNVQPDAVLQTVSKTGKKT 64
Query: 181 SFWPSE 198 +FW +E Sbjct: 65 AFWEAE 70
>tr|B6SPL7|B6SPL7_MAIZE Copper chaperone OS=Zea mays PE=4 SV=1 Length = 84
Score = 106 bits (264), Expect = 7e-22 Identities = 51/70 (72%), Positives = 58/70 (82%) Frame = +1
Query: 1 VELKVAMSCQGCVGAVKRVLGKMEGVNTYDIDLDAQKVTVKGNVKPEDVLSTVSKTGKAT 180 V LKV MSC+GCVGAVKRVLGKMEGV +YD+D+ QKVTVKGNV P+ VL TVSKTGK T Sbjct: 5 VVLKVGMSCEGCVGAVKRVLGKMEGVESYDVDIMEQKVTVKGNVTPDAVLQTVSKTGKKT 64
Query: 181 SFWPSEGSTA 210 SFW +E T+ Sbjct: 65 SFWEAEAVTS 74
>tr|A9PIL5|A9PIL5_POPJC Putative uncharacterized protein OS=Populus jackii PE=4 SV=1 Length = 85
Score = 106 bits (264), Expect = 7e-22 Identities = 51/66 (77%), Positives = 57/66 (86%) Frame = +1
Query: 1 VELKVAMSCQGCVGAVKRVLGKMEGVNTYDIDLDAQKVTVKGNVKPEDVLSTVSKTGKAT 180 V LKV MSC+GCVGAVKRVLGKMEGV +YDIDL QKVTVKGNV+P+ VL TVSKTGK T Sbjct: 5 VVLKVGMSCEGCVGAVKRVLGKMEGVESYDIDLKEQKVTVKGNVQPDAVLQTVSKTGKKT 64
Query: 181 SFWPSE 198 +FW +E Sbjct: 65 AFWEAE 70
>tr|A9PCL8|A9PCL8_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=4 SV=1 Length = 85
Score = 106 bits (264), Expect = 7e-22 Identities = 51/66 (77%), Positives = 57/66 (86%) Frame = +1
Query: 1 VELKVAMSCQGCVGAVKRVLGKMEGVNTYDIDLDAQKVTVKGNVKPEDVLSTVSKTGKAT 180 V LKV MSC+GCVGAVKRVLGKMEGV +YDIDL QKVTVKGNV+P+ VL TVSKTGK T Sbjct: 5 VVLKVGMSCEGCVGAVKRVLGKMEGVESYDIDLKEQKVTVKGNVQPDAVLQTVSKTGKKT 64
Query: 181 SFWPSE 198 +FW +E Sbjct: 65 AFWEAE 70
>tr|Q9SE04|Q9SE04_ORYSA Copper chaperone homolog CCH OS=Oryza sativa PE=2 SV=1 Length = 132
Score = 105 bits (262), Expect = 1e-21 Identities = 50/63 (79%), Positives = 54/63 (85%) Frame = +1
Query: 1 VELKVAMSCQGCVGAVKRVLGKMEGVNTYDIDLDAQKVTVKGNVKPEDVLSTVSKTGKAT 180 V LKV MSCQGC GAV+RVL KMEGV T+DID++ QKVTVKGNVKPEDV TVSKTGK T Sbjct: 6 VVLKVGMSCQGCAGAVRRVLTKMEGVETFDIDMEQQKVTVKGNVKPEDVFQTVSKTGKKT 65
Query: 181 SFW 189 SFW Sbjct: 66 SFW 68
>tr|Q84KJ2|Q84KJ2_SOLLC Copper chaperone OS=Solanum lycopersicum GN=LeCCH PE=4 SV=1 Length = 81
Score = 105 bits (262), Expect = 1e-21 Identities = 51/63 (80%), Positives = 55/63 (87%) Frame = +1
Query: 1 VELKVAMSCQGCVGAVKRVLGKMEGVNTYDIDLDAQKVTVKGNVKPEDVLSTVSKTGKAT 180 V LKV MSC+GCVGAVKRVLGKMEGV T+DIDL QKVTVKGNV+P+ VL TVSKTGK T Sbjct: 5 VVLKVGMSCEGCVGAVKRVLGKMEGVETFDIDLKEQKVTVKGNVQPDAVLKTVSKTGKPT 64
Query: 181 SFW 189 SFW Sbjct: 65 SFW 67
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