DK954874 |
Clone id |
TST39A01NGRL0021_J18 |
Library |
TST39 |
Length |
578 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0021_J18. 5' end sequence. |
Accession |
DK954874 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL651Contig1 |
Sequence |
GGGAAGGCCATCCATCTCTTCTGCAGGCCCTCTCCGCCCCCTTCACGGAATCCCGGCTGG CATTGCCGAACCTGCACCCATTCTTTTCTCTCAGCTCCATTGATTCTTCACCTTTCCTTA CTCTACGCCTGCAGGATAAAGCGTGTTCTTCTTTCTCCCCCACTCCTGTGTACTCCATTG CTACCCGTCTTCTTCATTACTACCCGTCTTCTTCCTCTGCTTCGCCTTCTGCATTCCCCG GTGTGAGTCTCACTGGCAATGGCGGCCACTGCTGCAAGGCTTGACCTCGATGGCAGCGAA ATTGCACCCCTCACCATCTGCATGATCGGAGCCGGGGGCTTTATAGGGTCGCATCTTTGC GAGAAGCTAATGTGGGAGACGGAGCACACTGTTCTCGCTATTGACGTGTATAGCGACAAG ATCCAGCACCTGTTGGAACCCGGCCAGCCATGGAGCTCTCGCATTGAATTCCACAGGCTC AACATTAAGAACGACCCTCGCTTGGAGGGCCTTATCAAGCTCTCCGATCTGGTGATTAAT CTAGCGGCAATCTGCACTCCGGCTGACTACAACACAAG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q6D2F1 |
Definition |
sp|Q6D2F1|ARNA_ERWCT Bifunctional polymyxin resistance protein arnA OS=Erwinia carotovora subsp. atroseptica |
Align length |
82 |
Score (bit) |
45.8 |
E-value |
0.0001 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7PQK8 |
Definition |
tr|A7PQK8|A7PQK8_VITVI Chromosome chr6 scaffold_25, whole genome shotgun sequence OS=Vitis vinifera |
Align length |
100 |
Score (bit) |
163.0 |
E-value |
5.0e-39 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK954874|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0021_J18, 5' (549 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A7PQK8|A7PQK8_VITVI Chromosome chr6 scaffold_25, whole genome... 163 5e-39 tr|A7Q660|A7Q660_VITVI Chromosome undetermined scaffold_55, whol... 162 1e-38 tr|Q2I2N3|Q2I2N3_SOLTU UDP-apiose/xylose synthase OS=Solanum tub... 161 2e-38 tr|B4UW57|B4UW57_ARAHY Putative dihydroflavonol reductase (Fragm... 161 2e-38 tr|Q6JJ41|Q6JJ41_IPOTF Putative dihydroflavonol reductase (Putat... 160 4e-38 tr|Q2LAM6|Q2LAM6_9MAGN UDP-D-apiose/UDP-D-xylose synthase OS=Vit... 160 5e-38 tr|B7FI57|B7FI57_MEDTR Putative uncharacterized protein OS=Medic... 160 5e-38 tr|Q6TNI9|Q6TNI9_NICBE UDP-D-apiose/UDP-D-xylose synthase OS=Nic... 159 1e-37 tr|A9PEH3|A9PEH3_POPTR Putative uncharacterized protein OS=Popul... 158 2e-37 tr|Q6QP37|Q6QP37_MAIZE DTDP-glucose 4,6-dehydratase OS=Zea mays ... 157 5e-37 tr|B6TQB1|B6TQB1_MAIZE Bifunctional polymyxin resistance arnA pr... 157 5e-37 tr|B4FUF3|B4FUF3_MAIZE Bifunctional polymyxin resistance arnA pr... 157 5e-37 tr|Q9ZUY6|Q9ZUY6_ARATH Putative dTDP-glucose 4-6-dehydratase (Pu... 155 1e-36 tr|Q8S9Z2|Q8S9Z2_ORYSJ cDNA clone:J023063F13, full insert sequen... 155 1e-36 tr|A3A1Y0|A3A1Y0_ORYSJ Putative uncharacterized protein OS=Oryza... 155 1e-36 tr|A2WZI6|A2WZI6_ORYSI Putative uncharacterized protein OS=Oryza... 155 1e-36 tr|Q9SGE0|Q9SGE0_ARATH T23G18.6 (Similar to dihydroflavonol redu... 155 2e-36 tr|Q94B32|Q94B32_ARATH Similar to dihydroflavonol reductase OS=A... 155 2e-36 tr|Q8L9F5|Q8L9F5_ARATH Putative dTDP-glucose 4-6-dehydratase OS=... 155 2e-36 tr|A9TZ14|A9TZ14_PHYPA Predicted protein OS=Physcomitrella paten... 154 3e-36 tr|A7QFD6|A7QFD6_VITVI Chromosome undetermined scaffold_87, whol... 142 1e-32 tr|A5AI43|A5AI43_VITVI Putative uncharacterized protein OS=Vitis... 142 1e-32 tr|B4F9U8|B4F9U8_MAIZE Putative uncharacterized protein OS=Zea m... 129 1e-28 tr|B6VCR3|B6VCR3_AEGSP Putative bifunctional polymyxin resistanc... 95 3e-18 tr|B6VCR5|B6VCR5_9POAL Putative bifunctional polymyxin resistanc... 94 4e-18 tr|B6VCR4|B6VCR4_TRIMO Putative bifunctional polymyxin resistanc... 94 4e-18 tr|B6VCR2|B6VCR2_SECCE Putative bifunctional polymyxin resistanc... 86 1e-15 tr|A0A961|A0A961_IPOTF Putative uncharacterized protein (Fragmen... 78 3e-13 tr|B5XTK9|B5XTK9_KLEP3 UDP-glucuronic acid decarboxylase/UDP-4-a... 48 3e-04 tr|A8FRR2|A8FRR2_SHESH Bifunctional polymyxin resistance ArnA pr... 46 0.001
>tr|A7PQK8|A7PQK8_VITVI Chromosome chr6 scaffold_25, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00022106001 PE=4 SV=1 Length = 388
Score = 163 bits (413), Expect = 5e-39 Identities = 79/100 (79%), Positives = 89/100 (89%), Gaps = 1/100 (1%) Frame = +2
Query: 251 ATAARLDLDGSEIAPLTICMIGAGGFIGSHLCEKLMWETEHTVLAIDVYSDKIQHLLEPG 430 A+AARLDLDG+ I P+TICMIGAGGFIGSHLCEKLM ET H VLA+DVYSDKI+HLLEP Sbjct: 2 ASAARLDLDGNAIKPMTICMIGAGGFIGSHLCEKLMAETMHKVLAVDVYSDKIKHLLEPS 61
Query: 431 -QPWSSRIEFHRLNIKNDPRLEGLIKLSDLVINLAAICTP 547 PWS RI+FHR+NIK+D RLEGLIK++DL INLAAICTP Sbjct: 62 THPWSDRIQFHRINIKHDSRLEGLIKMADLTINLAAICTP 101
>tr|A7Q660|A7Q660_VITVI Chromosome undetermined scaffold_55, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00031253001 PE=4 SV=1 Length = 388
Score = 162 bits (409), Expect = 1e-38 Identities = 77/100 (77%), Positives = 89/100 (89%), Gaps = 1/100 (1%) Frame = +2
Query: 251 ATAARLDLDGSEIAPLTICMIGAGGFIGSHLCEKLMWETEHTVLAIDVYSDKIQHLLEP- 427 A+AARLDLDG+ I P+TICMIGAGGFIGSHLCEKLM ET H VLA+DVY+DKI+HLLEP Sbjct: 2 ASAARLDLDGNAIKPMTICMIGAGGFIGSHLCEKLMAETMHKVLAVDVYNDKIRHLLEPA 61
Query: 428 GQPWSSRIEFHRLNIKNDPRLEGLIKLSDLVINLAAICTP 547 PWS RI+FHR+NIK+D RLEGLIK++DL +NLAAICTP Sbjct: 62 AHPWSDRIQFHRINIKHDSRLEGLIKMADLTVNLAAICTP 101
>tr|Q2I2N3|Q2I2N3_SOLTU UDP-apiose/xylose synthase OS=Solanum tuberosum GN=UAXs PE=2 SV=1 Length = 386
Score = 161 bits (407), Expect = 2e-38 Identities = 76/98 (77%), Positives = 87/98 (88%), Gaps = 1/98 (1%) Frame = +2
Query: 257 AARLDLDGSEIAPLTICMIGAGGFIGSHLCEKLMWETEHTVLAIDVYSDKIQHLLEP-GQ 433 A R+DLDG+ I P+TICMIGAGGFIGSHLCEKLM ET HTVLA+DVYSDKI+HLLEP Sbjct: 2 AGRVDLDGNPIKPMTICMIGAGGFIGSHLCEKLMSETPHTVLAVDVYSDKIKHLLEPTSL 61
Query: 434 PWSSRIEFHRLNIKNDPRLEGLIKLSDLVINLAAICTP 547 PW+ RI+FHR+NIKND RLEGLIK++DL +NLAAICTP Sbjct: 62 PWNGRIQFHRINIKNDSRLEGLIKMADLTVNLAAICTP 99
>tr|B4UW57|B4UW57_ARAHY Putative dihydroflavonol reductase (Fragment) OS=Arachis hypogaea PE=2 SV=1 Length = 217
Score = 161 bits (407), Expect = 2e-38 Identities = 79/103 (76%), Positives = 88/103 (85%), Gaps = 1/103 (0%) Frame = +2
Query: 242 AMAATAARLDLDGSEIAPLTICMIGAGGFIGSHLCEKLMWETEHTVLAIDVYSDKIQHLL 421 A A +AR+DLDG+ I PLTICMIGAGGFIGSHLCEKLM ET+H VLA+DVY+DKI+HLL Sbjct: 5 ASAGASARVDLDGNPIKPLTICMIGAGGFIGSHLCEKLMSETQHKVLALDVYNDKIKHLL 64
Query: 422 EPGQ-PWSSRIEFHRLNIKNDPRLEGLIKLSDLVINLAAICTP 547 EP PW RI FHRLNIK+D RLEGLIK+SDL INLAAICTP Sbjct: 65 EPDNLPWHGRITFHRLNIKHDSRLEGLIKMSDLTINLAAICTP 107
>tr|Q6JJ41|Q6JJ41_IPOTF Putative dihydroflavonol reductase (Putative uncharacterized protein) OS=Ipomoea trifida PE=4 SV=1 Length = 407
Score = 160 bits (405), Expect = 4e-38 Identities = 75/98 (76%), Positives = 87/98 (88%), Gaps = 1/98 (1%) Frame = +2
Query: 257 AARLDLDGSEIAPLTICMIGAGGFIGSHLCEKLMWETEHTVLAIDVYSDKIQHLLEPGQ- 433 A R+DLDG+ I P+TICMIGAGGFIGSHLCEKLM ET+H VLA+DVY+DKI+HLLEP Sbjct: 2 AGRVDLDGNPIKPITICMIGAGGFIGSHLCEKLMSETQHKVLAVDVYNDKIKHLLEPASL 61
Query: 434 PWSSRIEFHRLNIKNDPRLEGLIKLSDLVINLAAICTP 547 PW+ RI+FHRLNIKND RLEGLIK++DL +NLAAICTP Sbjct: 62 PWADRIQFHRLNIKNDSRLEGLIKMADLTVNLAAICTP 99
>tr|Q2LAM6|Q2LAM6_9MAGN UDP-D-apiose/UDP-D-xylose synthase OS=Vitis pseudoreticulata PE=2 SV=1 Length = 293
Score = 160 bits (404), Expect = 5e-38 Identities = 78/100 (78%), Positives = 88/100 (88%), Gaps = 1/100 (1%) Frame = +2
Query: 251 ATAARLDLDGSEIAPLTICMIGAGGFIGSHLCEKLMWETEHTVLAIDVYSDKIQHLLEPG 430 A+AARLDLDG+ I P+TICMIGAGGFIGSHLCEKLM ET H VLA+DV SDKI+HLLEP Sbjct: 2 ASAARLDLDGNAIKPMTICMIGAGGFIGSHLCEKLMAETMHKVLAVDVCSDKIKHLLEPA 61
Query: 431 -QPWSSRIEFHRLNIKNDPRLEGLIKLSDLVINLAAICTP 547 PWS RI+FHR+NIK+D RLEGLIK++DL INLAAICTP Sbjct: 62 THPWSDRIQFHRINIKHDSRLEGLIKMADLTINLAAICTP 101
>tr|B7FI57|B7FI57_MEDTR Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1 Length = 390
Score = 160 bits (404), Expect = 5e-38 Identities = 77/99 (77%), Positives = 87/99 (87%), Gaps = 1/99 (1%) Frame = +2
Query: 254 TAARLDLDGSEIAPLTICMIGAGGFIGSHLCEKLMWETEHTVLAIDVYSDKIQHLLEP-G 430 ++ R+DLDG+ I PLTICMIGAGGFIGSHLCEKLM ET H VLA+DVY+DKI+HLLEP Sbjct: 5 SSTRIDLDGNPIKPLTICMIGAGGFIGSHLCEKLMSETSHKVLALDVYNDKIKHLLEPES 64
Query: 431 QPWSSRIEFHRLNIKNDPRLEGLIKLSDLVINLAAICTP 547 PW+ RI FHRLNIKND RLEGLIK++DLVINLAAICTP Sbjct: 65 LPWNGRIHFHRLNIKNDSRLEGLIKMADLVINLAAICTP 103
>tr|Q6TNI9|Q6TNI9_NICBE UDP-D-apiose/UDP-D-xylose synthase OS=Nicotiana benthamiana GN=AXS1 PE=2 SV=1 Length = 387
Score = 159 bits (401), Expect = 1e-37 Identities = 75/96 (78%), Positives = 86/96 (89%), Gaps = 1/96 (1%) Frame = +2
Query: 263 RLDLDGSEIAPLTICMIGAGGFIGSHLCEKLMWETEHTVLAIDVYSDKIQHLLEPGQ-PW 439 R+DLDG+ I P+ ICMIGAGGFIGSHLCEKLM ET HTVLA+DVYSDKI+HLLEP PW Sbjct: 5 RVDLDGNVIKPMKICMIGAGGFIGSHLCEKLMNETPHTVLAVDVYSDKIKHLLEPADLPW 64
Query: 440 SSRIEFHRLNIKNDPRLEGLIKLSDLVINLAAICTP 547 + RI+FHR+NIKND RLEGLIK++DLV+NLAAICTP Sbjct: 65 TGRIQFHRINIKNDSRLEGLIKMADLVVNLAAICTP 100
>tr|A9PEH3|A9PEH3_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 389
Score = 158 bits (400), Expect = 2e-37 Identities = 74/102 (72%), Positives = 89/102 (87%), Gaps = 1/102 (0%) Frame = +2
Query: 245 MAATAARLDLDGSEIAPLTICMIGAGGFIGSHLCEKLMWETEHTVLAIDVYSDKIQHLLE 424 MA++ R+DLDG I PLTICMIGAGGFIGSHLCEK++ ET+H +LA+DVY+DKI+HLLE Sbjct: 1 MASSVVRVDLDGKPINPLTICMIGAGGFIGSHLCEKILNETQHKILALDVYNDKIKHLLE 60
Query: 425 PGQ-PWSSRIEFHRLNIKNDPRLEGLIKLSDLVINLAAICTP 547 P PW+ RI+FHR+NIK+D RLEGLIK+SDL INLAAICTP Sbjct: 61 PDSLPWAGRIQFHRINIKHDSRLEGLIKMSDLTINLAAICTP 102
>tr|Q6QP37|Q6QP37_MAIZE DTDP-glucose 4,6-dehydratase OS=Zea mays PE=2 SV=1 Length = 395
Score = 157 bits (396), Expect = 5e-37 Identities = 77/98 (78%), Positives = 85/98 (86%), Gaps = 1/98 (1%) Frame = +2
Query: 257 AARLDLDGSEIAPLTICMIGAGGFIGSHLCEKLMWETEHTVLAIDVYSDKIQHLLEPGQP 436 A RLDLDG+ IAPLTICMIGAGGFIGSHLCEKLM ET HTVLA+DVY DKI+HL++P P Sbjct: 9 ATRLDLDGNPIAPLTICMIGAGGFIGSHLCEKLMAETHHTVLAVDVYCDKIRHLVDPAPP 68
Query: 437 -WSSRIEFHRLNIKNDPRLEGLIKLSDLVINLAAICTP 547 + RI FHRLNIKND RLEGLIK++DL INLAAICTP Sbjct: 69 HLAGRISFHRLNIKNDSRLEGLIKMADLTINLAAICTP 106
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