DK954897 [AcEST]

DK954897
Clone id	TST39A01NGRL0021_K18
Library	TST39
Length	470
Definition	Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0021_K18. 5' end sequence.
Accession	DK954897
Tissue type	prothallia with plantlets
Developmental stage	gametophytes with sporophytes
Contig ID	CL1435Contig1
Sequence	GTGGAGTTTTGGAAGAGCTTTTTGCGTGTGGCTTTGGAGAACAAAGTGAGGAGGAAGAGG AGATCTTTGGCAGTGAGAAAGCTTGAAGGTGTTCTCTCTCAGTGATCCTCCATCTCTCTG TCTCTTGTGCAGTTCCAAGGAAGGCGAAGGCAAGCTCAAAGGATGGGAAGAGCTCACACA ATATCGCTCTCTTGGGGCGTGTGTGTGTTTTTGAAGGACTAGAGGACCAAGGGAAGTCGG AGAAGCTAAGGCGAGTGCAGAAGCAAGGGGAAAGTGGAAGGACTGGGAAGAGGAAGATTA CACCCTGTCTCGCACTCTTCTTTGCAACATTGCTTCTCTCTCTTTTCACTCTCATTCAAG AAGAAGGAAAGGAGCTTACAGTGCCCATTTGAGGCTAACTTTGTAATTAGTTTTTGAATT TATTAAGCAATACAATTTTTGTTCTCATTAGCAAAAAAAAAAAAAAAAAA
■■Homology search results ■■	-
Swiss-Prot (release 56.9)	Link to BlastX Result : Swiss-Prot
sp_hit_id	-
Definition	No hits.
Align length	-
Score (bit)	-
E-value	-
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DK954897\|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0021_K18, 5' (452 letters) Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters Searching..................................................done *** No hits found ****
TrEMBL (release 39.9)	Link to BlastX Result : TrEMBL
tr_hit_id	A5N729
Definition	tr\|A5N729\|A5N729_CLOK5 DNA topoisomerase OS=Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680)
Align length	42
Score (bit)	33.5
E-value	5.5
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DK954897\|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0021_K18, 5' (452 letters) Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr\|A5N729\|A5N729_CLOK5 DNA topoisomerase OS=Clostridium kluyveri... 33 5.5 >tr\|A5N729\|A5N729_CLOK5 DNA topoisomerase OS=Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680) GN=topA2 PE=3 SV=1 Length = 727 Score = 33.5 bits (75), Expect = 5.5 Identities = 16/42 (38%), Positives = 24/42 (57%) Frame = +1 Query: 253 ECRSKGKVEGLGRGRLHPVSHSSLQHCFSLFSLSFKKKERSL 378 EC K +++G G R++ SH S + FS F+ FK+ E L Sbjct: 652 ECHKKLELKGEGEKRIYVCSHCSFREKFSSFNKRFKENEGKL 693