DK954902
Clone id TST39A01NGRL0021_K23
Library
Length 527
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0021_K23. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence
ATCAAGTGTTAGTCATGGCTTCTAAGAAGATAACGTGCATGCTGGTGATAGTGATGGTGA
TGCTGGTGGCATACATGAGCAGCGTTGCTAATGCTGAGGTGGAGGAAGTGGGGCGTAAAT
TAGTGGCTGGGGCAGGGGCAGAAGCAGGTGAGGAGGCCGAGTTGTGGGCCAAGAAAGGTC
ATTACCCTTACAAGAAAGGGTACAAGAAGGGCGGCTACCACCACAAGAAGGGCGGCGGCT
ACGGCAAGGGTCCGGGCCACCCTCACTAACTCAAGGCAGCTGCTTCGTCCGAGCGCGTCT
TCTGTCCGGTGTGTACGCATCCTCTTTAATTTCCTTGTGTGACGTTTCCCGCGCCGTTAA
TAATGTATACATTAGGCCTACGTAGTGTCTCACTTCTCATGTATGTTCCAAAGCCCACTC
CAAGCTTACTGCAAGCTTTCGAGTTTTCTCAATGGTTGTCAGGCACTTGAGTACTTTCTA
TATCATATGCTTACTTTTGACTTTAAAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id Q7ZZH7
Definition sp|Q7ZZH7|DBF4A_XENLA Protein DBF4 homolog A OS=Xenopus laevis
Align length 76
Score (bit) 29.6
E-value 8.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK954902|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0021_K23, 5'
(504 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q7ZZH7|DBF4A_XENLA Protein DBF4 homolog A OS=Xenopus laevis G... 30 8.4

>sp|Q7ZZH7|DBF4A_XENLA Protein DBF4 homolog A OS=Xenopus laevis
GN=dbf4 PE=1 SV=1
Length = 661

Score = 29.6 bits (65), Expect = 8.4
Identities = 17/76 (22%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Frame = -1

Query: 498 KSKHMI*KVLKCLTTIEKTRKLAVSLEWALE--HT*EVRHYVGLMYTLLTARETSHKEIK 325
+ K ++ + +K + K L+ +L W ++ H E +HY+ T L S +K
Sbjct: 120 RGKSLVKRAIKEQEILPKNSILSNALNWGVKILHVEEAKHYIEKKKTALQQVRKSQPVVK 179

Query: 324 EDAYTPDRRRARTKQL 277
++ RR+ + ++L
Sbjct: 180 VESKPQTRRKVKPQKL 195


tr_hit_id Q4SMZ1
Definition tr|Q4SMZ1|Q4SMZ1_TETNG DNA polymerase (Fragment) OS=Tetraodon nigroviridis
Align length 61
Score (bit) 32.7
E-value 9.9
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK954902|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0021_K23, 5'
(504 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q4SMZ1|Q4SMZ1_TETNG DNA polymerase (Fragment) OS=Tetraodon ni... 33 9.9
tr|Q9FCG8|Q9FCG8_STRCO Putative uncharacterized protein SCO4201 ... 33 9.9
tr|B5HLR9|B5HLR9_9ACTO Magnesium or manganese-dependent protein ... 33 9.9

>tr|Q4SMZ1|Q4SMZ1_TETNG DNA polymerase (Fragment) OS=Tetraodon
nigroviridis GN=GSTENG00015518001 PE=3 SV=1
Length = 1753

Score = 32.7 bits (73), Expect = 9.9
Identities = 25/61 (40%), Positives = 29/61 (47%)
Frame = +2

Query: 176 RSLPLQERVQEGRLPPQEGRRLRQGSGPPSLTQGSCFVRARLLSGVYASSLISLCDVSRA 355
R +P E E + PPQ R + GSGPPSL G A L G + S IS SR
Sbjct: 699 RPVPQPEDGAEPQEPPQRDR-VPGGSGPPSLPHGQSCASA-ALPGAFLRSDISFYGCSRR 756

Query: 356 V 358
V
Sbjct: 757 V 757


>tr|Q9FCG8|Q9FCG8_STRCO Putative uncharacterized protein SCO4201
OS=Streptomyces coelicolor GN=SCO4201 PE=4 SV=1
Length = 544

Score = 32.7 bits (73), Expect = 9.9
Identities = 18/39 (46%), Positives = 23/39 (58%)
Frame = +2

Query: 164 VGQERSLPLQERVQEGRLPPQEGRRLRQGSGPPSLTQGS 280
V ++RS + R+ EGRL QE RRL +G P L GS
Sbjct: 281 VERKRSDSAERRLAEGRLRAQENRRLERGLLPTPLLAGS 319


>tr|B5HLR9|B5HLR9_9ACTO Magnesium or manganese-dependent protein
phosphatase OS=Streptomyces sviceus ATCC 29083
GN=SSEG_00354 PE=4 SV=1
Length = 478

Score = 32.7 bits (73), Expect = 9.9
Identities = 17/39 (43%), Positives = 24/39 (61%)
Frame = +2

Query: 164 VGQERSLPLQERVQEGRLPPQEGRRLRQGSGPPSLTQGS 280
V ++RS + R+ EGR+ QE RRL +G P L +GS
Sbjct: 215 VERKRSDTAERRLAEGRVRAQENRRLERGLLPTPLLEGS 253