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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK954903
Clone id TST39A01NGRL0021_K24
Library
Length 513
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0021_K24. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
GACAAGCTCCTCTTCTCTGTGAAGAAGAGCTCCATGGTTTCATTCAAAACCCATCTTGAA
ATCTTCCTTCAAGGGAATGAGAATGACGATGCTCCGGATTTCGAAGTCAAGGGCAACTTC
TTCCAGCGCGAGGCACAGATCTTCCACAAGGACCAGCTCATAGCAGAGGTGAAGAGAAAG
TACACAGTTGGAAATGTGCTCTTGGACAAGCACACATTCAGTGTTGTGGTCTTCCCTAAT
GTGGACCAAGCTTTTGTGGCAGCTCTTGTGATCATCATGGACCGTATCCATGAGGACTAG
ATGGCTTTGACAGCCCCGCATGAGCAAGCCCGCCCTTCGTCTTCATCCTGTCCTGCCACC
ATCTACCTAAGGATGTCCCCTTGTTTTTGCATAAGCATTCCTTCACCGCCATATCCATCT
TTCTGTTTGTGGTTTCCATTGCAAGTAGCTTAGTTTGTAAGTTTGACCCCTAGTCAAGGT
AACTGGTTTTTGTTACATCATTTTGCTTTGCTT
■■Homology search results ■■ -
sp_hit_id Q9LZX1
Definition sp|Q9LZX1|Y5175_ARATH UPF0706 protein At5g01750 OS=Arabidopsis thaliana
Align length 85
Score (bit) 76.3
E-value 8.0e-14
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK954903|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0021_K24, 5'
         (513 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9LZX1|Y5175_ARATH UPF0706 protein At5g01750 OS=Arabidopsis t...    76   8e-14
sp|Q9BYQ2|KRA94_HUMAN Keratin-associated protein 9-4 OS=Homo sap...    33   1.0  
sp|Q09165|DIG1_CAEEL Mesocentin OS=Caenorhabditis elegans GN=dig...    33   1.0  
sp|Q9BYQ3|KRA93_HUMAN Keratin-associated protein 9-3 OS=Homo sap...    30   5.0  
sp|Q9BYQ4|KRA92_HUMAN Keratin-associated protein 9-2 OS=Homo sap...    30   5.0  
sp|A8MXZ3|KR923_HUMAN Putative keratin-associated protein 9-2-li...    30   5.0  
sp|P43218|GIPR_MESAU Gastric inhibitory polypeptide receptor OS=...    30   6.5  
sp|P04499|TERM_ADE05 DNA terminal protein OS=Human adenovirus C ...    30   8.5  
sp|P03269|TERM_ADE02 DNA terminal protein OS=Human adenovirus C ...    30   8.5  
sp|A5A6P5|KRA92_PANTR Keratin-associated protein 9-2 OS=Pan trog...    30   8.5  
sp|A1KQY9|K118A_POLSE Keratin, type I cytoskeletal 18-A OS=Polyp...    30   8.7  

>sp|Q9LZX1|Y5175_ARATH UPF0706 protein At5g01750 OS=Arabidopsis
           thaliana GN=At5g01750 PE=1 SV=1
          Length = 217

 Score = 76.3 bits (186), Expect = 8e-14
 Identities = 35/85 (41%), Positives = 59/85 (69%), Gaps = 2/85 (2%)
 Frame = +1

Query: 49  THLEIFLQGNENDDAPDFEVKGNFFQREAQIF--HKDQLIAEVKRKYTVGNVLLDKHTFS 222
           T L++FL  N+++   DF VKG++ +R   ++    D ++A++ RK+TV +V L K  FS
Sbjct: 129 TKLDVFLGHNKDEKRCDFRVKGSWLERSCVVYAGESDAIVAQMHRKHTVQSVFLGKDNFS 188

Query: 223 VVVFPNVDQAFVAALVIIMDRIHED 297
           V V+PNVD AF+A+LV+I+D ++ +
Sbjct: 189 VTVYPNVDYAFIASLVVILDDVNRE 213


>sp|Q9BYQ2|KRA94_HUMAN Keratin-associated protein 9-4 OS=Homo
           sapiens GN=KRTAP9-4 PE=2 SV=1
          Length = 154

 Score = 32.7 bits (73), Expect = 1.0
 Identities = 12/26 (46%), Positives = 13/26 (50%)
 Frame = +3

Query: 195 CALGQAHIQCCGLP*CGPSFCGSSCD 272
           C        CC  P C P+ CGSSCD
Sbjct: 66  CVTSCCQPSCCSTPCCQPTCCGSSCD 91


>sp|Q09165|DIG1_CAEEL Mesocentin OS=Caenorhabditis elegans GN=dig-1 PE=1
             SV=2
          Length = 13100

 Score = 32.7 bits (73), Expect = 1.0
 Identities = 21/55 (38%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
 Frame = +1

Query: 193   NVLLDKHTFSVVVFPN--VDQAFVAALVIIMDRIHED*MALTAPHEQARPSSSSC 351
             N L   HT++V V  N  VD +   A+    D +H D    TAP +  +PS SSC
Sbjct: 12875 NELPSDHTYTVCVMTNERVDNSTALAIDKNCDSLHID-QNTTAPEDYVKPSPSSC 12928


>sp|Q9BYQ3|KRA93_HUMAN Keratin-associated protein 9-3 OS=Homo
           sapiens GN=KRTAP9-3 PE=1 SV=1
          Length = 159

 Score = 30.4 bits (67), Expect = 5.0
 Identities = 11/25 (44%), Positives = 12/25 (48%)
 Frame = +3

Query: 195 CALGQAHIQCCGLP*CGPSFCGSSC 269
           C        CC  P C P+ CGSSC
Sbjct: 66  CVTSCCQPSCCSTPCCQPTCCGSSC 90


>sp|Q9BYQ4|KRA92_HUMAN Keratin-associated protein 9-2 OS=Homo
           sapiens GN=KRTAP9-2 PE=1 SV=2
          Length = 174

 Score = 30.4 bits (67), Expect = 5.0
 Identities = 11/25 (44%), Positives = 12/25 (48%)
 Frame = +3

Query: 195 CALGQAHIQCCGLP*CGPSFCGSSC 269
           C        CC  P C P+ CGSSC
Sbjct: 71  CVTSCCQPSCCSTPCCQPTCCGSSC 95


>sp|A8MXZ3|KR923_HUMAN Putative keratin-associated protein 9-2-like
           3 OS=Homo sapiens PE=3 SV=1
          Length = 250

 Score = 30.4 bits (67), Expect = 5.0
 Identities = 11/25 (44%), Positives = 12/25 (48%)
 Frame = +3

Query: 195 CALGQAHIQCCGLP*CGPSFCGSSC 269
           C        CC  P C P+ CGSSC
Sbjct: 71  CVASCCQPSCCSTPCCQPTCCGSSC 95


>sp|P43218|GIPR_MESAU Gastric inhibitory polypeptide receptor
           OS=Mesocricetus auratus GN=GIPR PE=2 SV=1
          Length = 462

 Score = 30.0 bits (66), Expect = 6.5
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = +3

Query: 102 RSQGQLLPARGTDLPQGPAHSRGEEKVHSW 191
           RS  + +P  G+ LP GP H  GEE + S+
Sbjct: 432 RSAPREVPITGSTLPSGPLHGPGEEVLESY 461


>sp|P04499|TERM_ADE05 DNA terminal protein OS=Human adenovirus C
           serotype 5 GN=PTP PE=1 SV=1
          Length = 653

 Score = 29.6 bits (65), Expect = 8.5
 Identities = 13/21 (61%), Positives = 15/21 (71%)
 Frame = +3

Query: 93  SGFRSQGQLLPARGTDLPQGP 155
           S  R+Q QLLPARG D+P  P
Sbjct: 614 SNLRAQHQLLPARGADVPLPP 634


>sp|P03269|TERM_ADE02 DNA terminal protein OS=Human adenovirus C
           serotype 2 GN=PTP PE=1 SV=2
          Length = 653

 Score = 29.6 bits (65), Expect = 8.5
 Identities = 13/21 (61%), Positives = 15/21 (71%)
 Frame = +3

Query: 93  SGFRSQGQLLPARGTDLPQGP 155
           S  R+Q QLLPARG D+P  P
Sbjct: 614 SNLRAQHQLLPARGADVPLPP 634


>sp|A5A6P5|KRA92_PANTR Keratin-associated protein 9-2 OS=Pan
           troglodytes GN=KRTAP9-2 PE=2 SV=1
          Length = 170

 Score = 29.6 bits (65), Expect = 8.5
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = +3

Query: 222 CCGLP*CGPSFCGSSC 269
           CC  P C P+ CGSSC
Sbjct: 80  CCSTPCCQPTCCGSSC 95
tr_hit_id B6T7N7
Definition tr|B6T7N7|B6T7N7_MAIZE Putative uncharacterized protein OS=Zea mays
Align length 85
Score (bit) 83.2
E-value 7.0e-15
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK954903|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0021_K24, 5'
         (513 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B6T7N7|B6T7N7_MAIZE Putative uncharacterized protein OS=Zea m...    83   7e-15
tr|B6SU53|B6SU53_MAIZE Putative uncharacterized protein OS=Zea m...    82   2e-14
tr|A9NL98|A9NL98_PICSI Putative uncharacterized protein OS=Picea...    81   3e-14
tr|A9NZT7|A9NZT7_PICSI Putative uncharacterized protein OS=Picea...    79   1e-13
tr|A2YJM7|A2YJM7_ORYSI Putative uncharacterized protein OS=Oryza...    78   2e-13
tr|A7QFJ2|A7QFJ2_VITVI Chromosome chr8 scaffold_88, whole genome...    78   3e-13
tr|Q84YM9|Q84YM9_ORYSJ Os07g0230700 protein OS=Oryza sativa subs...    75   2e-12
tr|A3BI01|A3BI01_ORYSJ Putative uncharacterized protein OS=Oryza...    75   2e-12
tr|A7QFJ1|A7QFJ1_VITVI Chromosome chr8 scaffold_88, whole genome...    73   9e-12
tr|A9S6M4|A9S6M4_PHYPA Predicted protein OS=Physcomitrella paten...    70   5e-11
tr|A9T2I3|A9T2I3_PHYPA Predicted protein OS=Physcomitrella paten...    70   8e-11
tr|Q9SF24|Q9SF24_ARATH F26K24.3 protein OS=Arabidopsis thaliana ...    67   4e-10
tr|B6TXU6|B6TXU6_MAIZE Putative uncharacterized protein OS=Zea m...    65   3e-09
tr|Q10BI2|Q10BI2_ORYSJ Os03g0816800 protein OS=Oryza sativa subs...    62   2e-08
tr|A9T0M4|A9T0M4_PHYPA Predicted protein OS=Physcomitrella paten...    61   3e-08
tr|A9SW48|A9SW48_PHYPA Predicted protein (Fragment) OS=Physcomit...    59   1e-07
tr|B8AMA3|B8AMA3_ORYSI Putative uncharacterized protein OS=Oryza...    55   2e-06
tr|A9T2I4|A9T2I4_PHYPA Predicted protein OS=Physcomitrella paten...    53   1e-05
tr|Q9LQ36|Q9LQ36_ARATH F14M2.3 protein OS=Arabidopsis thaliana G...    52   2e-05
tr|Q9ZQR8|Q9ZQR8_ARATH Putative uncharacterized protein At2g1456...    51   3e-05
tr|Q8VYP1|Q8VYP1_ARATH Putative uncharacterized protein At2g1456...    51   3e-05
tr|A7NY47|A7NY47_VITVI Chromosome chr6 scaffold_3, whole genome ...    51   3e-05
tr|A9NZ78|A9NZ78_PICSI Putative uncharacterized protein OS=Picea...    51   4e-05
tr|Q9LYM3|Q9LYM3_ARATH Putative uncharacterized protein F18O21_1...    49   2e-04
tr|A7Q9T4|A7Q9T4_VITVI Chromosome chr8 scaffold_68, whole genome...    48   3e-04
tr|A5BRT0|A5BRT0_VITVI Putative uncharacterized protein OS=Vitis...    48   3e-04
tr|Q10BI3|Q10BI3_ORYSJ Expressed protein OS=Oryza sativa subsp. ...    46   0.001
tr|Q0DMC9|Q0DMC9_ORYSJ Os03g0816700 protein (Fragment) OS=Oryza ...    46   0.001
tr|B8LPH7|B8LPH7_PICSI Putative uncharacterized protein OS=Picea...    45   0.002
tr|Q84TW5|Q84TW5_ORYSJ Putative uncharacterized protein OSJNBa00...    45   0.003

>tr|B6T7N7|B6T7N7_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 210

 Score = 83.2 bits (204), Expect = 7e-15
 Identities = 39/85 (45%), Positives = 58/85 (68%), Gaps = 2/85 (2%)
 Frame = +1

Query: 49  THLEIFLQGNENDDAPDFEVKGNFFQREAQIF--HKDQLIAEVKRKYTVGNVLLDKHTFS 222
           T ++IFL  N    A DF++KG++F+R    +  +   +IA++ R++TV NVLL + TF 
Sbjct: 123 TEMDIFLASNTAQQACDFKIKGSYFERSCAFYLGNSSSMIAQMNRQFTVTNVLLGRDTFG 182

Query: 223 VVVFPNVDQAFVAALVIIMDRIHED 297
           V VFP+VD  FVAALV+I+D IH +
Sbjct: 183 VTVFPHVDYVFVAALVVILDEIHRE 207


>tr|B6SU53|B6SU53_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 207

 Score = 81.6 bits (200), Expect = 2e-14
 Identities = 38/85 (44%), Positives = 57/85 (67%), Gaps = 2/85 (2%)
 Frame = +1

Query: 49  THLEIFLQGNENDDAPDFEVKGNFFQREAQIF--HKDQLIAEVKRKYTVGNVLLDKHTFS 222
           T ++IFL  N      DF++KG++F+R    +  +   +IA++ R++TV NVLL + TF 
Sbjct: 120 TEMDIFLASNTAQQVCDFKIKGSYFERSCAFYLGNSSSMIAQMNRQFTVTNVLLGRDTFG 179

Query: 223 VVVFPNVDQAFVAALVIIMDRIHED 297
           V VFP+VD  FVAALV+I+D IH +
Sbjct: 180 VTVFPHVDYVFVAALVVILDEIHRE 204


>tr|A9NL98|A9NL98_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 222

 Score = 80.9 bits (198), Expect = 3e-14
 Identities = 38/83 (45%), Positives = 58/83 (69%)
 Frame = +1

Query: 49  THLEIFLQGNENDDAPDFEVKGNFFQREAQIFHKDQLIAEVKRKYTVGNVLLDKHTFSVV 228
           T L ++L  N + D   F+VKG+FF+R   I+    +IAE++RKYTV  VL+ + TF+V 
Sbjct: 133 TSLNVYLGNNSHSD---FKVKGSFFERSCTIYQGRTVIAEMRRKYTVSQVLMGRDTFTVT 189

Query: 229 VFPNVDQAFVAALVIIMDRIHED 297
           V+P VD AF+ ALV+I+D I+++
Sbjct: 190 VYPGVDYAFIVALVVILDEINKE 212


>tr|A9NZT7|A9NZT7_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 222

 Score = 79.3 bits (194), Expect = 1e-13
 Identities = 38/83 (45%), Positives = 58/83 (69%)
 Frame = +1

Query: 49  THLEIFLQGNENDDAPDFEVKGNFFQREAQIFHKDQLIAEVKRKYTVGNVLLDKHTFSVV 228
           T L ++L  N + D   F+VKG+FF+R   I+    +IAE++RKYTV  VL+ + TF+V 
Sbjct: 133 TSLNVYLGNNCHSD---FKVKGSFFERSCTIYQGRTVIAEMRRKYTVSQVLMGRDTFTVT 189

Query: 229 VFPNVDQAFVAALVIIMDRIHED 297
           V+P VD AF+ ALV+I+D I+++
Sbjct: 190 VYPGVDYAFIVALVVILDEINKE 212


>tr|A2YJM7|A2YJM7_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_25434 PE=4 SV=1
          Length = 201

 Score = 78.2 bits (191), Expect = 2e-13
 Identities = 35/85 (41%), Positives = 56/85 (65%), Gaps = 2/85 (2%)
 Frame = +1

Query: 49  THLEIFLQGNENDDAPDFEVKGNFFQREAQIF--HKDQLIAEVKRKYTVGNVLLDKHTFS 222
           T ++IFL GN  +   DF++KG++F R +  +    + +IA++ RK+T  +V+L +  FS
Sbjct: 114 TEMDIFLAGNTAEQVCDFKIKGSYFDRSSAFYLGKSNTIIAQMNRKHTAASVVLGRDVFS 173

Query: 223 VVVFPNVDQAFVAALVIIMDRIHED 297
           + VFP VD  F+AALV I+D +H D
Sbjct: 174 ITVFPQVDYVFIAALVAILDDVHRD 198


>tr|A7QFJ2|A7QFJ2_VITVI Chromosome chr8 scaffold_88, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00037442001
           PE=4 SV=1
          Length = 216

 Score = 77.8 bits (190), Expect = 3e-13
 Identities = 34/85 (40%), Positives = 61/85 (71%), Gaps = 2/85 (2%)
 Frame = +1

Query: 49  THLEIFLQGNENDDAPDFEVKGNFFQREAQIF--HKDQLIAEVKRKYTVGNVLLDKHTFS 222
           T L++FL  N  ++  DF++KG++F R   ++  + + +IA++ +K+ V +V+L K TF+
Sbjct: 129 TGLDVFLAANTKEEICDFKLKGSWFDRSCTVYAGNSNTIIAQMHKKHNVQSVVLGKDTFA 188

Query: 223 VVVFPNVDQAFVAALVIIMDRIHED 297
           V V+PNVD AF+ AL++I+D I++D
Sbjct: 189 VTVYPNVDYAFIVALIVILDEINDD 213


>tr|Q84YM9|Q84YM9_ORYSJ Os07g0230700 protein OS=Oryza sativa subsp.
           japonica GN=OSJNBa0086N05.106 PE=2 SV=1
          Length = 214

 Score = 75.1 bits (183), Expect = 2e-12
 Identities = 34/85 (40%), Positives = 55/85 (64%), Gaps = 2/85 (2%)
 Frame = +1

Query: 49  THLEIFLQGNENDDAPDFEVKGNFFQREAQIF--HKDQLIAEVKRKYTVGNVLLDKHTFS 222
           T ++IFL GN  +   DF++KG++  R +  +    + +IA++ RK+T  +V+L +  FS
Sbjct: 127 TEMDIFLAGNTAEQVCDFKIKGSYCDRSSAFYLGKSNTIIAQMNRKHTAASVVLGRDVFS 186

Query: 223 VVVFPNVDQAFVAALVIIMDRIHED 297
           + VFP VD  F+AALV I+D +H D
Sbjct: 187 ITVFPQVDYVFIAALVAILDDVHRD 211


>tr|A3BI01|A3BI01_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_022673 PE=4 SV=1
          Length = 201

 Score = 75.1 bits (183), Expect = 2e-12
 Identities = 34/85 (40%), Positives = 55/85 (64%), Gaps = 2/85 (2%)
 Frame = +1

Query: 49  THLEIFLQGNENDDAPDFEVKGNFFQREAQIF--HKDQLIAEVKRKYTVGNVLLDKHTFS 222
           T ++IFL GN  +   DF++KG++  R +  +    + +IA++ RK+T  +V+L +  FS
Sbjct: 114 TEMDIFLAGNTAEQVCDFKIKGSYCDRSSAFYLGKSNTIIAQMNRKHTAASVVLGRDVFS 173

Query: 223 VVVFPNVDQAFVAALVIIMDRIHED 297
           + VFP VD  F+AALV I+D +H D
Sbjct: 174 ITVFPQVDYVFIAALVAILDDVHRD 198


>tr|A7QFJ1|A7QFJ1_VITVI Chromosome chr8 scaffold_88, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00037441001
           PE=4 SV=1
          Length = 213

 Score = 72.8 bits (177), Expect = 9e-12
 Identities = 32/85 (37%), Positives = 59/85 (69%), Gaps = 2/85 (2%)
 Frame = +1

Query: 49  THLEIFLQGNENDDAPDFEVKGNFFQREAQIF--HKDQLIAEVKRKYTVGNVLLDKHTFS 222
           T L +FL  N  ++  DF+++G++F R   ++  + + +IA++ +KY V +V+L K TF+
Sbjct: 129 TALNVFLAANTKEEVCDFKLRGSWFDRSCTVYAGNSNTIIAKMHKKYNVQSVVLGKDTFA 188

Query: 223 VVVFPNVDQAFVAALVIIMDRIHED 297
           V V+ NVD AF+ AL++I++ I++D
Sbjct: 189 VTVYTNVDYAFIVALIVILEEINKD 213


>tr|A9S6M4|A9S6M4_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_163128 PE=4 SV=1
          Length = 206

 Score = 70.5 bits (171), Expect = 5e-11
 Identities = 32/83 (38%), Positives = 56/83 (67%), Gaps = 2/83 (2%)
 Frame = +1

Query: 55  LEIFLQGNENDDAPDFEVKGNFFQREAQIFHKDQLIAEVKRKYTVGNVLLDKHTFSVVVF 234
           + IFL+ N     PD+ ++G F  ++  I+  ++L+AEV R  ++ N++++K  F+V ++
Sbjct: 124 INIFLRSNTAQKKPDYTIEGLFLAKKCSIYFGEELVAEVTRDVSLKNLIVNKSIFNVTIY 183

Query: 235 PNVDQAFVAALVIIMDRI--HED 297
           P VD AF+ +LVIIMD+I  H+D
Sbjct: 184 PGVDIAFIFSLVIIMDKIYVHDD 206