DK954921
Clone id TST39A01NGRL0021_L18
Library
Length 538
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0021_L18. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence
GAGCGATTGCTACCCCCGTGTGCAGCAGAAGACGTAAGGGCAATGGCTTCTACGAGCATG
GCCTGCTCACACCAGCTGGTGCCTGCGCTGTCAGTTCCTTTACCCAAATCCAGATTTCTG
GGCGCTCCCTCCTTCGCACCTGCCCTCGCCTGCAGCAATGGTTCTCGTCTCACCTGCATG
GCCTCTAGCGAGTGGCTGCCTGGCCAACCCCGCCCTGCCCATCTGGATGGCTCCTCCCCT
GGCGACTTTGGGTTCGACCCCCTCGGGCTCGCTGAGGTACCCGAAAATTTCGCTCGCTTC
AAGGAGTCTGAGCTCATTCACTGCAGATGGGCGATGCTAGCTGTGCCAGGAATTCTGTTG
CCAGAAGCTCTGGGGCTGGGTAACTGGGTGGATGCGCAGAAATGGGCAGCTACGCCAGGC
GGGCATGCCACCTATTTGGGCAATCCTGTACCCTGGGGCAACCTGTCCTTCATTATTGCC
TTCGAATTTTTTGCCATTGCTTTTTCAGAGGCTTTAAGAAATGAGGAGAATGACCCTG
■■Homology search results ■■ -
sp_hit_id Q9SDM1
Definition sp|Q9SDM1|CB121_HORVU Chlorophyll a-b binding protein 1B-21, chloroplastic OS=Hordeum vulgare
Align length 167
Score (bit) 193.0
E-value 5.0e-49
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK954921|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0021_L18, 5'
(538 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9SDM1|CB121_HORVU Chlorophyll a-b binding protein 1B-21, chl... 193 5e-49
sp|P12360|CB11_SOLLC Chlorophyll a-b binding protein 6A, chlorop... 174 2e-43
sp|Q9SQL2|CB24_PEA Chlorophyll a-b binding protein P4, chloropla... 91 4e-18
sp|Q36718|CB120_HORVU Chlorophyll a-b binding protein 1B-20, chl... 86 1e-16
sp|P10708|CB12_SOLLC Chlorophyll a-b binding protein 7, chloropl... 85 3e-16
sp|P27521|CB24_ARATH Chlorophyll a-b binding protein 4, chloropl... 80 5e-15
sp|P04784|CB21_WHEAT Chlorophyll a-b binding protein, chloroplas... 78 3e-14
sp|P06671|CB22_MAIZE Chlorophyll a-b binding protein, chloroplas... 77 4e-14
sp|P13869|CB12_PETHY Chlorophyll a-b binding protein, chloroplas... 77 7e-14
sp|P15194|CB2B_PINSY Chlorophyll a-b binding protein type 2 memb... 74 3e-13
sp|P08975|LH15_EUGGR Light-harvesting complex I LH35 proteins (F... 74 6e-13
sp|P13851|CB21_SINAL Chlorophyll a-b binding protein 1, chloropl... 74 6e-13
sp|P27524|CB4A_SOLLC Chlorophyll a-b binding protein CP24 10A, c... 73 8e-13
sp|P12333|CB2A_SPIOL Chlorophyll a-b binding protein, chloroplas... 73 8e-13
sp|P27497|CB29_MAIZE Chlorophyll a-b binding protein M9, chlorop... 73 8e-13
sp|P12062|CB26_PETSP Chlorophyll a-b binding protein 37, chlorop... 72 1e-12
sp|P14279|CB25_SOLLC Chlorophyll a-b binding protein 5, chloropl... 72 1e-12
sp|P14278|CB24_SOLLC Chlorophyll a-b binding protein 4, chloropl... 72 1e-12
sp|P27494|CB23_TOBAC Chlorophyll a-b binding protein 36, chlorop... 72 1e-12
sp|P07369|CB2G_SOLLC Chlorophyll a-b binding protein 3C, chlorop... 71 3e-12
sp|P07370|CB2B_SOLLC Chlorophyll a-b binding protein 1B, chlorop... 71 3e-12
sp|P27491|CB27_TOBAC Chlorophyll a-b binding protein 7, chloropl... 71 3e-12
sp|Q9XF89|CB26_ARATH Chlorophyll a-b binding protein CP26, chlor... 71 3e-12
sp|P27496|CB25_TOBAC Chlorophyll a-b binding protein 50, chlorop... 71 3e-12
sp|P12470|CB25_NICPL Chlorophyll a-b binding protein E, chloropl... 71 3e-12
sp|P27495|CB24_TOBAC Chlorophyll a-b binding protein 40, chlorop... 71 3e-12
sp|P27493|CB22_TOBAC Chlorophyll a-b binding protein 21, chlorop... 71 3e-12
sp|P07371|CB22_PEA Chlorophyll a-b binding protein AB80, chlorop... 71 3e-12
sp|P27492|CB21_TOBAC Chlorophyll a-b binding protein 16, chlorop... 71 3e-12
sp|P27518|CB21_GOSHI Chlorophyll a-b binding protein 151, chloro... 71 3e-12

>sp|Q9SDM1|CB121_HORVU Chlorophyll a-b binding protein 1B-21,
chloroplastic OS=Hordeum vulgare GN=LHC Ib-21 PE=1 SV=1
Length = 245

Score = 193 bits (490), Expect = 5e-49
Identities = 101/167 (60%), Positives = 112/167 (67%), Gaps = 2/167 (1%)
Frame = +1

Query: 43 MASTS--MACSHQLVPALSVPLPKSRFLGAPSFAPALACSNGSRLTCMASSEWLPGQPRP 216
MAS+S +CS VP+L P +S G P A A + R+T S+EW PGQPRP
Sbjct: 1 MASSSGLRSCSAVGVPSLLAPSSRSGRSGLPFCAYA---TTSGRVTM--SAEWFPGQPRP 55

Query: 217 AHLDGSSPGDFGFDPLGLAEVPENFARFKESELIHCRWAMLAVPGILLPEALGLGNWVDA 396
AHLDGSSPGDFGFDPLGLA VPENF RFKESE+ HCRWAML VPG+L+PEALGLGNWV A
Sbjct: 56 AHLDGSSPGDFGFDPLGLATVPENFERFKESEIYHCRWAMLCVPGVLVPEALGLGNWVKA 115

Query: 397 QKWAATPGGHATYLGNPVPWGNLXXXXXXXXXXXXXXXXLRNEENDP 537
Q+WAA P G ATYLGNPVPWGNL R E DP
Sbjct: 116 QEWAALPDGQATYLGNPVPWGNLPTILAIEFLAIAFAEQQRTMEKDP 162



Score = 30.8 bits (68), Expect = 4.4
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +1

Query: 253 FDPLGLAEVPENFARFKESELIHCRWAMLAVPGILLPEA 369
FDPLG ++ P F K E+ + R AMLA G + ++
Sbjct: 172 FDPLGFSKDPAKFEELKLKEIKNGRLAMLAFVGFCVQQS 210


>sp|P12360|CB11_SOLLC Chlorophyll a-b binding protein 6A,
chloroplastic OS=Solanum lycopersicum GN=CAB6A PE=2 SV=1
Length = 246

Score = 174 bits (441), Expect = 2e-43
Identities = 83/140 (59%), Positives = 99/140 (70%)
Frame = +1

Query: 46 ASTSMACSHQLVPALSVPLPKSRFLGAPSFAPALACSNGSRLTCMASSEWLPGQPRPAHL 225
++T M+C V + KS+F A P + S++W+PGQPRP++L
Sbjct: 3 SNTLMSCGIPAVCPSFLSSTKSKFAAA---MPVYVGATNFMSRFSMSADWMPGQPRPSYL 59

Query: 226 DGSSPGDFGFDPLGLAEVPENFARFKESELIHCRWAMLAVPGILLPEALGLGNWVDAQKW 405
DGS+PGDFGFD LGL EVP N R+KESELIHCRWAMLAVPGI++PEALGLGNWV AQ+W
Sbjct: 60 DGSAPGDFGFDSLGLGEVPANLERYKESELIHCRWAMLAVPGIIVPEALGLGNWVKAQEW 119

Query: 406 AATPGGHATYLGNPVPWGNL 465
AA PGG ATYLG PVPWG L
Sbjct: 120 AAIPGGQATYLGQPVPWGTL 139



Score = 33.5 bits (75), Expect = 0.68
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = +1

Query: 253 FDPLGLAEVPENFARFKESELIHCRWAMLAVPGILLPEALGLG 381
FDPLG ++ P F K E+ + R A+LA+ G + ++ LG
Sbjct: 173 FDPLGYSKDPAKFEELKVKEIKNGRLALLAIVGFCVQQSAYLG 215


>sp|Q9SQL2|CB24_PEA Chlorophyll a-b binding protein P4,
chloroplastic OS=Pisum sativum GN=lhcA-P4 PE=1 SV=1
Length = 252

Score = 90.9 bits (224), Expect = 4e-18
Identities = 51/110 (46%), Positives = 60/110 (54%), Gaps = 8/110 (7%)
Frame = +1

Query: 106 KSRFLGAPS--------FAPALACSNGSRLTCMASSEWLPGQPRPAHLDGSSPGDFGFDP 261
KSRFLG S F P + S EWLPG P +L GS PGD GFDP
Sbjct: 19 KSRFLGGSSGKLNRGVAFRPVGCSPSASFKVEAKKGEWLPGLASPGYLTGSLPGDNGFDP 78

Query: 262 LGLAEVPENFARFKESELIHCRWAMLAVPGILLPEALGLGNWVDAQKWAA 411
LGLAE PEN F ++EL++ RWAML V G+LLPE ++ KW A
Sbjct: 79 LGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTSIGIINVPKWYA 128


>sp|Q36718|CB120_HORVU Chlorophyll a-b binding protein 1B-20,
chloroplastic (Fragment) OS=Hordeum vulgare GN=LHC Ib-20
PE=1 SV=1
Length = 231

Score = 85.9 bits (211), Expect = 1e-16
Identities = 44/99 (44%), Positives = 58/99 (58%), Gaps = 5/99 (5%)
Frame = +1

Query: 139 PALACSNGSRLT-----CMASSEWLPGQPRPAHLDGSSPGDFGFDPLGLAEVPENFARFK 303
P+ A S R T A WLPG PA+LDGS GD GFDPL LAE PE+ F
Sbjct: 13 PSPAASGSPRSTRRDVAVQAKGSWLPGLQSPAYLDGSLEGDNGFDPLALAEDPEDLRWFV 72

Query: 304 ESELIHCRWAMLAVPGILLPEALGLGNWVDAQKWAATPG 420
++++++ RWAML V G+L+PE L ++A +W PG
Sbjct: 73 QADVVNGRWAMLGVAGMLIPEVLTKAGLMNAPEWLRLPG 111


>sp|P10708|CB12_SOLLC Chlorophyll a-b binding protein 7,
chloroplastic OS=Solanum lycopersicum GN=CAB7 PE=3 SV=1
Length = 270

Score = 84.7 bits (208), Expect = 3e-16
Identities = 49/135 (36%), Positives = 65/135 (48%), Gaps = 20/135 (14%)
Frame = +1

Query: 61 ACSHQLVPALSVPLPKSRFLGAPSFAPALACSNGSRL----------------TCMASSE 192
AC+ + A++ P SR G+ + G RL C+A+
Sbjct: 4 ACASSTIAAVAFSSPSSRRNGSIVGTTKASFLGGRRLRVSKYSTTPTARSATTVCVAADP 63

Query: 193 ----WLPGQPRPAHLDGSSPGDFGFDPLGLAEVPENFARFKESELIHCRWAMLAVPGILL 360
W PG P LDGS PGDFGFDPLGLA PE+ +++EL+HCRWAML GI +
Sbjct: 64 DRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLGAAGIFI 123

Query: 361 PEALGLGNWVDAQKW 405
PE L ++ W
Sbjct: 124 PELLTKIGILNTPSW 138


>sp|P27521|CB24_ARATH Chlorophyll a-b binding protein 4,
chloroplastic OS=Arabidopsis thaliana GN=CAB4 PE=1 SV=1
Length = 251

Score = 80.5 bits (197), Expect = 5e-15
Identities = 41/77 (53%), Positives = 49/77 (63%), Gaps = 6/77 (7%)
Frame = +1

Query: 190 EWLPGQPRPAHLDGSSPGDFGFDPLGLAEVPENFARFKESELIHCRWAMLAVPGILLPEA 369
EWLPG P +L GS GD GFDPLGLAE PEN F ++EL++ RWAML V G+LLPE
Sbjct: 56 EWLPGLASPDYLTGSLAGDNGFDPLGLAEDPENLKWFVQAELVNGRWAMLGVAGMLLPEV 115

Query: 370 ------LGLGNWVDAQK 402
+ + W DA K
Sbjct: 116 FTKIGIINVPEWYDAGK 132


>sp|P04784|CB21_WHEAT Chlorophyll a-b binding protein, chloroplastic
OS=Triticum aestivum GN=WHAB1.6 PE=3 SV=1
Length = 266

Score = 77.8 bits (190), Expect = 3e-14
Identities = 54/154 (35%), Positives = 75/154 (48%), Gaps = 19/154 (12%)
Frame = +1

Query: 43 MASTSMACSHQLVPALSVP-LPKSRFLGAPSFAPALACSNGSRLTCMASSEW-------- 195
MA+T+M+ S +V LP S +G + +++ +SS W
Sbjct: 1 MAATTMSLSSSSFAGKAVKNLPSSALIGDARVNMRKTAAKAKQVS--SSSPWYGSDRVLY 58

Query: 196 ---LPGQPRPAHLDGSSPGDFGFDPLGLAEVPENFARFKESELIHCRWAMLAVPGILLPE 366
L G+P P++L G PGD+G+D GL+ PE FA+ +E E+IHCRWAML G + PE
Sbjct: 59 LGPLSGEP-PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPE 117

Query: 367 AL-------GLGNWVDAQKWAATPGGHATYLGNP 447
L G W A + GG YLGNP
Sbjct: 118 LLARNGVKFGEAGWFKAGSQIFSDGG-LDYLGNP 150



Score = 38.9 bits (89), Expect = 0.016
Identities = 36/113 (31%), Positives = 52/113 (46%), Gaps = 5/113 (4%)
Frame = +1

Query: 115 FLGAPSF--APALACSNGSRLTCMASSEW--LPGQPRPAHLDGSSPGDFGFDPLGLAEVP 282
+LG PS A +L ++ M + E + G P +D PG FDPLGLAE P
Sbjct: 146 YLGNPSLVHAQSLLAIWACQVVLMGAVEGYRIAGGPLGEIVDPLYPGG-SFDPLGLAERP 204

Query: 283 ENFARFKESELIHCRWAMLAVPGILLPEAL-GLGNWVDAQKWAATPGGHATYL 438
+ FA K E+ + R AM ++ G + + G G D A P + +L
Sbjct: 205 QAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLEDLADHIADPVNNNAWL 257


>sp|P06671|CB22_MAIZE Chlorophyll a-b binding protein, chloroplastic
OS=Zea mays PE=2 SV=1
Length = 265

Score = 77.4 bits (189), Expect = 4e-14
Identities = 55/153 (35%), Positives = 73/153 (47%), Gaps = 18/153 (11%)
Frame = +1

Query: 43 MASTSMACSHQLVPALSVPLPKSRFLGAPSFAPALACSNGSRLTCMASSEW--------- 195
MAS++MA S +V +P S F A A ++ + S W
Sbjct: 1 MASSTMALSSTAFAGKAVNVPSSSFGEARVTMRKTAAK--AKPAAASGSPWYGPDRVLYL 58

Query: 196 --LPGQPRPAHLDGSSPGDFGFDPLGLAEVPENFARFKESELIHCRWAMLAVPGILLPEA 369
L G+P P++L G PGD+G+D GL+ PE FA+ +E E+IHCRWAML G + PE
Sbjct: 59 GPLSGEP-PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 117

Query: 370 L-------GLGNWVDAQKWAATPGGHATYLGNP 447
L G W A + GG YLGNP
Sbjct: 118 LARNGVKFGEAVWFKAGSQIFSEGG-LDYLGNP 149



Score = 37.4 bits (85), Expect = 0.047
Identities = 30/86 (34%), Positives = 42/86 (48%), Gaps = 4/86 (4%)
Frame = +1

Query: 115 FLGAPSF--APALACSNGSRLTCMASSEW--LPGQPRPAHLDGSSPGDFGFDPLGLAEVP 282
+LG PS A ++ ++ M + E + G P +D PG FDPLGLA+ P
Sbjct: 145 YLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGG-SFDPLGLADDP 203

Query: 283 ENFARFKESELIHCRWAMLAVPGILL 360
E F K EL R AML++ G +
Sbjct: 204 EAFGELKVKELKKGRLAMLSMFGFFV 229


>sp|P13869|CB12_PETHY Chlorophyll a-b binding protein, chloroplastic
OS=Petunia hybrida PE=2 SV=1
Length = 270

Score = 76.6 bits (187), Expect = 7e-14
Identities = 48/137 (35%), Positives = 65/137 (47%), Gaps = 8/137 (5%)
Frame = +1

Query: 19 CAAEDVRAMASTSMACSHQLVPALSVPLPKSRFLGAPSFAPA-LACSNGSRLTCMASSE- 192
CA+ + A+A +S + V K+ FLG + GSR +++
Sbjct: 5 CASSTIAAVAFSSPSSQKN---GSIVGATKASFLGGKRLRVSKFIAPVGSRSVAVSAVAA 61

Query: 193 ------WLPGQPRPAHLDGSSPGDFGFDPLGLAEVPENFARFKESELIHCRWAMLAVPGI 354
W PG P LDGS PGDFGFDPLGL PE+ ++EL+H RWAML GI
Sbjct: 62 DPDRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPESLKWNAQAELVHSRWAMLGAAGI 121

Query: 355 LLPEALGLGNWVDAQKW 405
+PE L ++ W
Sbjct: 122 FIPEFLTKIGVLNTPSW 138


>sp|P15194|CB2B_PINSY Chlorophyll a-b binding protein type 2 member
1B, chloroplastic OS=Pinus sylvestris PE=2 SV=1
Length = 274

Score = 74.3 bits (181), Expect = 3e-13
Identities = 41/89 (46%), Positives = 52/89 (58%), Gaps = 7/89 (7%)
Frame = +1

Query: 202 GQPRPAHLDGSSPGDFGFDPLGLAEVPENFARFKESELIHCRWAMLAVPGILLPEAL--- 372
G+P P++L G PGD+G+D GL+ PENFA+ +E E+IHCRWAML G + PE L
Sbjct: 72 GEP-PSYLTGEFPGDYGWDTAGLSADPENFAKNRELEVIHCRWAMLGALGCVFPELLARN 130

Query: 373 ----GLGNWVDAQKWAATPGGHATYLGNP 447
G W A + GG YLGNP
Sbjct: 131 GVKFGEAVWFKAGAQIFSEGG-LDYLGNP 158



Score = 37.4 bits (85), Expect = 0.047
Identities = 30/86 (34%), Positives = 42/86 (48%), Gaps = 4/86 (4%)
Frame = +1

Query: 115 FLGAPSF--APALACSNGSRLTCMASSEW--LPGQPRPAHLDGSSPGDFGFDPLGLAEVP 282
+LG PS A ++ ++ M + E + G P D PG FDPLGLAE P
Sbjct: 154 YLGNPSLVHAQSILAIWACQVILMGAVEGYRIAGGPLGEVTDPIYPGG-SFDPLGLAEDP 212

Query: 283 ENFARFKESELIHCRWAMLAVPGILL 360
E FA K E+ + R AM ++ G +
Sbjct: 213 EAFAELKVKEIKNGRLAMFSMFGFFV 238


tr_hit_id A9T399
Definition tr|A9T399|A9T399_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 165
Score (bit) 201.0
E-value 3.0e-50
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK954921|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0021_L18, 5'
(538 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9T399|A9T399_PHYPA Predicted protein OS=Physcomitrella paten... 201 3e-50
tr|A9NRY9|A9NRY9_PICSI Putative uncharacterized protein OS=Picea... 192 7e-48
tr|A9NS16|A9NS16_PICSI Putative uncharacterized protein OS=Picea... 192 9e-48
tr|A9P266|A9P266_PICSI Putative uncharacterized protein OS=Picea... 192 1e-47
tr|B6SSN3|B6SSN3_MAIZE Chlorophyll a-b binding protein 6A OS=Zea... 191 2e-47
tr|B4XGT7|B4XGT7_9POAL Chloroplast chlorophyll a/b binding prote... 191 3e-47
tr|Q9ZSU0|Q9ZSU0_ORYSA Chlorophyll a/b-binding protein OS=Oryza ... 190 5e-47
tr|Q5ZA98|Q5ZA98_ORYSJ Os06g0320500 protein OS=Oryza sativa subs... 190 5e-47
tr|A2YCB9|A2YCB9_ORYSI Putative uncharacterized protein OS=Oryza... 190 5e-47
tr|B4FZL4|B4FZL4_MAIZE Chlorophyll a-b binding protein 6A OS=Zea... 189 1e-46
tr|B7FH03|B7FH03_MEDTR Putative uncharacterized protein OS=Medic... 184 2e-45
tr|A9T3X6|A9T3X6_PHYPA Predicted protein OS=Physcomitrella paten... 184 3e-45
tr|Q6V8T3|Q6V8T3_MALDO Chlorophyll a/b-binding protein type I (F... 183 6e-45
tr|A5AE63|A5AE63_VITVI Putative uncharacterized protein OS=Vitis... 183 6e-45
tr|Q14K86|Q14K86_PLAAC Chlorophyll a/b-binding protein, photosys... 182 7e-45
tr|A9TJX6|A9TJX6_PHYPA Predicted protein OS=Physcomitrella paten... 182 1e-44
tr|Q9C5R7|Q9C5R7_ARATH AT3g54890 OS=Arabidopsis thaliana GN=AT3g... 181 3e-44
tr|Q01667|Q01667_ARATH AT3g54890 (Chlorophyll A/B-binding protei... 180 5e-44
tr|A8MS75|A8MS75_ARATH Uncharacterized protein At3g54890.4 OS=Ar... 180 5e-44
tr|Q40512|Q40512_TOBAC Photosystem I light-harvesting chlorophyl... 179 6e-44
tr|Q02069|Q02069_PINSY Type 1 chlorophyll a /b-binding protein O... 179 8e-44
tr|Q3EAJ6|Q3EAJ6_ARATH Uncharacterized protein At3g54890.3 OS=Ar... 178 1e-43
tr|Q3E725|Q3E725_ARATH Uncharacterized protein At3g54890.2 OS=Ar... 178 1e-43
tr|A9PJ58|A9PJ58_POPJC Putative uncharacterized protein OS=Popul... 178 1e-43
tr|Q7DM40|Q7DM40_PINSY Type 1 chlorophyll a /b-binding protein (... 174 3e-42
tr|Q9M539|Q9M539_9LAMI Chlorophyll a/b-binding protein type I (F... 146 6e-34
tr|A2SY12|A2SY12_MESVI Light-harvesting chlorophyll-a/b binding ... 127 3e-28
tr|A9NQL6|A9NQL6_PICSI Putative uncharacterized protein OS=Picea... 117 3e-25
tr|Q9FVE3|Q9FVE3_CHLRE Chlorophyll A-B binding protein of LHCI O... 108 2e-22
tr|Q7DM26|Q7DM26_CHLRE Light harvesting complex protein I-20 OS=... 108 2e-22

>tr|A9T399|A9T399_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_139567 PE=4 SV=1
Length = 241

Score = 201 bits (510), Expect = 3e-50
Identities = 102/165 (61%), Positives = 116/165 (70%)
Frame = +1

Query: 43 MASTSMACSHQLVPALSVPLPKSRFLGAPSFAPALACSNGSRLTCMASSEWLPGQPRPAH 222
MA+ + A ++V ++ S F G+ S + L CSNGSR+ CMA EWLPG PRP++
Sbjct: 1 MATAAAAQVSRVVTGVATAQKSSFFAGSSSVS-LLGCSNGSRV-CMA--EWLPGNPRPSY 56

Query: 223 LDGSSPGDFGFDPLGLAEVPENFARFKESELIHCRWAMLAVPGILLPEALGLGNWVDAQK 402
LDGS+PGDFGFDPLGL EVPEN RFKESELIH RWAMLAVPG+L+PEALG GNWV AQK
Sbjct: 57 LDGSAPGDFGFDPLGLGEVPENLERFKESELIHARWAMLAVPGVLIPEALGYGNWVSAQK 116

Query: 403 WAATPGGHATYLGNPVPWGNLXXXXXXXXXXXXXXXXLRNEENDP 537
WAATPGG ATYLGNPVPWGNL RN E DP
Sbjct: 117 WAATPGGQATYLGNPVPWGNLPVILAIEFLAIAFAESQRNGEPDP 161


>tr|A9NRY9|A9NRY9_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 247

Score = 192 bits (489), Expect = 7e-48
Identities = 93/140 (66%), Positives = 111/140 (79%), Gaps = 3/140 (2%)
Frame = +1

Query: 49 STSMACSHQLVP---ALSVPLPKSRFLGAPSFAPALACSNGSRLTCMASSEWLPGQPRPA 219
+T++ C H + P A + KSRF +P+ + +L NGSR++ S+EW+PGQPRPA
Sbjct: 2 ATAVGCLHIVAPVAFAGTFSSAKSRFF-SPTNSLSLGVCNGSRVSM--SAEWMPGQPRPA 58

Query: 220 HLDGSSPGDFGFDPLGLAEVPENFARFKESELIHCRWAMLAVPGILLPEALGLGNWVDAQ 399
HLDGS+PGDFGFDPLGL VPEN R+KESELIHCRWAMLAVPG+L+PEALGLGNWV+AQ
Sbjct: 59 HLDGSAPGDFGFDPLGLGVVPENLERYKESELIHCRWAMLAVPGVLIPEALGLGNWVEAQ 118

Query: 400 KWAATPGGHATYLGNPVPWG 459
KWAA PGG ATYLG PVPWG
Sbjct: 119 KWAAIPGGQATYLGVPVPWG 138


>tr|A9NS16|A9NS16_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 247

Score = 192 bits (488), Expect = 9e-48
Identities = 96/166 (57%), Positives = 115/166 (69%), Gaps = 3/166 (1%)
Frame = +1

Query: 49 STSMACSHQLVPAL---SVPLPKSRFLGAPSFAPALACSNGSRLTCMASSEWLPGQPRPA 219
+T++ CSH + P + + KSRF +P+ + +L NGSR++ S+EW+PGQPRP
Sbjct: 2 ATAVGCSHVVAPVVFAGAFSSAKSRFF-SPTNSLSLGVCNGSRVSM--SAEWMPGQPRPP 58

Query: 220 HLDGSSPGDFGFDPLGLAEVPENFARFKESELIHCRWAMLAVPGILLPEALGLGNWVDAQ 399
HLDGS+PGDFGFDPL L VPEN R+KESELIHCRWAMLAVPG+L+PEALGLGNWV+AQ
Sbjct: 59 HLDGSAPGDFGFDPLRLGVVPENLERYKESELIHCRWAMLAVPGVLIPEALGLGNWVEAQ 118

Query: 400 KWAATPGGHATYLGNPVPWGNLXXXXXXXXXXXXXXXXLRNEENDP 537
KWAA PG ATYLG PVPWG L RN E DP
Sbjct: 119 KWAAIPGNQATYLGAPVPWGYLPVILAVEFLSIAFVESQRNGEPDP 164



Score = 33.9 bits (76), Expect = 5.6
Identities = 27/100 (27%), Positives = 45/100 (45%), Gaps = 3/100 (3%)
Frame = +1

Query: 91 SVPLPKSRFLGAP---SFAPALACSNGSRLTCMASSEWLPGQPRPAHLDGSSPGDFGFDP 261
++P ++ +LGAP + P + + + S G+P P PG FDP
Sbjct: 122 AIPGNQATYLGAPVPWGYLPVILAVEFLSIAFVESQR--NGEPDPEKR--KYPGG-AFDP 176

Query: 262 LGLAEVPENFARFKESELIHCRWAMLAVPGILLPEALGLG 381
LG ++ P F +K E+ + R A+LA G + + G
Sbjct: 177 LGFSKDPAKFKEYKVKEIKNGRLALLAFVGFCVQASANPG 216


>tr|A9P266|A9P266_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 247

Score = 192 bits (487), Expect = 1e-47
Identities = 96/166 (57%), Positives = 114/166 (68%), Gaps = 3/166 (1%)
Frame = +1

Query: 49 STSMACSHQLVPAL---SVPLPKSRFLGAPSFAPALACSNGSRLTCMASSEWLPGQPRPA 219
+T++ CSH + P + + KSRF +P+ + +L NGSR++ S EW+PGQPRP
Sbjct: 2 ATAVGCSHVVAPVVFAGAFSSAKSRFF-SPTNSLSLGVCNGSRVSM--SDEWMPGQPRPP 58

Query: 220 HLDGSSPGDFGFDPLGLAEVPENFARFKESELIHCRWAMLAVPGILLPEALGLGNWVDAQ 399
HLDGS+PGDFGFDPL L VPEN R+KESELIHCRWAMLAVPG+L+PEALGLGNWV+AQ
Sbjct: 59 HLDGSAPGDFGFDPLRLGVVPENLERYKESELIHCRWAMLAVPGVLIPEALGLGNWVEAQ 118

Query: 400 KWAATPGGHATYLGNPVPWGNLXXXXXXXXXXXXXXXXLRNEENDP 537
KWAA PG ATYLG PVPWG L RN E DP
Sbjct: 119 KWAAIPGNQATYLGAPVPWGYLPVILAVEFLSIAFVESQRNGEPDP 164



Score = 33.9 bits (76), Expect = 5.6
Identities = 27/100 (27%), Positives = 45/100 (45%), Gaps = 3/100 (3%)
Frame = +1

Query: 91 SVPLPKSRFLGAP---SFAPALACSNGSRLTCMASSEWLPGQPRPAHLDGSSPGDFGFDP 261
++P ++ +LGAP + P + + + S G+P P PG FDP
Sbjct: 122 AIPGNQATYLGAPVPWGYLPVILAVEFLSIAFVESQR--NGEPDPEKR--KYPGG-AFDP 176

Query: 262 LGLAEVPENFARFKESELIHCRWAMLAVPGILLPEALGLG 381
LG ++ P F +K E+ + R A+LA G + + G
Sbjct: 177 LGFSKDPAKFKEYKVKEIKNGRLALLAFVGFCVQASANPG 216


>tr|B6SSN3|B6SSN3_MAIZE Chlorophyll a-b binding protein 6A OS=Zea
mays PE=2 SV=1
Length = 245

Score = 191 bits (486), Expect = 2e-47
Identities = 102/168 (60%), Positives = 113/168 (67%)
Frame = +1

Query: 34 VRAMASTSMACSHQLVPALSVPLPKSRFLGAPSFAPALACSNGSRLTCMASSEWLPGQPR 213
V A +S +CS VP+L P +S L AP A A + R+T S+EW+PGQPR
Sbjct: 2 VMASSSGLRSCSAVGVPSLLAPSSRSGRL-APFCANA---TTSGRVTM--SAEWMPGQPR 55

Query: 214 PAHLDGSSPGDFGFDPLGLAEVPENFARFKESELIHCRWAMLAVPGILLPEALGLGNWVD 393
PAHLDGSSPGDFGFDPLGLA VPENF RFKESE+ HCRWAMLAVPGIL+PEALGLGNWV
Sbjct: 56 PAHLDGSSPGDFGFDPLGLATVPENFERFKESEVYHCRWAMLAVPGILVPEALGLGNWVK 115

Query: 394 AQKWAATPGGHATYLGNPVPWGNLXXXXXXXXXXXXXXXXLRNEENDP 537
AQ+WAA PGG ATYLG PVPWG L R E DP
Sbjct: 116 AQEWAAVPGGQATYLGAPVPWGTLPTILVIEFVAIAFAEHQRTMEKDP 163


>tr|B4XGT7|B4XGT7_9POAL Chloroplast chlorophyll a/b binding protein
OS=Phyllostachys edulis GN=Lhca1 PE=2 SV=1
Length = 246

Score = 191 bits (484), Expect = 3e-47
Identities = 100/168 (59%), Positives = 111/168 (66%), Gaps = 2/168 (1%)
Frame = +1

Query: 40 AMASTS--MACSHQLVPALSVPLPKSRFLGAPSFAPALACSNGSRLTCMASSEWLPGQPR 213
AMAS+S +CS VP+L P +S G P A A + R+T S+EW PGQPR
Sbjct: 2 AMASSSGLRSCSAVGVPSLLAPSSRSGRSGLPFCAYA---TTSGRVTM--SAEWFPGQPR 56

Query: 214 PAHLDGSSPGDFGFDPLGLAEVPENFARFKESELIHCRWAMLAVPGILLPEALGLGNWVD 393
PAHLDGSSPGDFGFDPLGL VPENF RFKESE+ HCRWAML VPG+L+PEALGLGNWV
Sbjct: 57 PAHLDGSSPGDFGFDPLGLGTVPENFERFKESEVYHCRWAMLCVPGVLVPEALGLGNWVK 116

Query: 394 AQKWAATPGGHATYLGNPVPWGNLXXXXXXXXXXXXXXXXLRNEENDP 537
AQ+WAA PGG ATY G PVPWGNL R E DP
Sbjct: 117 AQEWAAVPGGQATYFGVPVPWGNLPTILAIEFLAIAFAEHQRTMEKDP 164


>tr|Q9ZSU0|Q9ZSU0_ORYSA Chlorophyll a/b-binding protein OS=Oryza
sativa GN=Cab26 PE=2 SV=1
Length = 241

Score = 190 bits (482), Expect = 5e-47
Identities = 97/166 (58%), Positives = 112/166 (67%), Gaps = 1/166 (0%)
Frame = +1

Query: 43 MASTSM-ACSHQLVPALSVPLPKSRFLGAPSFAPALACSNGSRLTCMASSEWLPGQPRPA 219
MA++ + +CS VP+L P L ++A + R+T S+EW+PGQPRPA
Sbjct: 1 MATSGLRSCSAVGVPSLLAPSSNRSRLPVCAYA-----TTSGRVTM--SAEWMPGQPRPA 53

Query: 220 HLDGSSPGDFGFDPLGLAEVPENFARFKESELIHCRWAMLAVPGILLPEALGLGNWVDAQ 399
HLDGSSPGDFGFDPLGLA VPENF RFKESE+ HCRWAMLAVPG+L+PEALGLGNWV AQ
Sbjct: 54 HLDGSSPGDFGFDPLGLATVPENFERFKESEVYHCRWAMLAVPGVLVPEALGLGNWVQAQ 113

Query: 400 KWAATPGGHATYLGNPVPWGNLXXXXXXXXXXXXXXXXLRNEENDP 537
+WAA PGG ATYLGNPVPWG L R E DP
Sbjct: 114 EWAAEPGGQATYLGNPVPWGTLPTILVIEFVAIAFAEHQRTMEKDP 159


>tr|Q5ZA98|Q5ZA98_ORYSJ Os06g0320500 protein OS=Oryza sativa subsp.
japonica GN=P0578B12.4 PE=2 SV=1
Length = 241

Score = 190 bits (482), Expect = 5e-47
Identities = 97/166 (58%), Positives = 112/166 (67%), Gaps = 1/166 (0%)
Frame = +1

Query: 43 MASTSM-ACSHQLVPALSVPLPKSRFLGAPSFAPALACSNGSRLTCMASSEWLPGQPRPA 219
MA++ + +CS VP+L P L ++A + R+T S+EW+PGQPRPA
Sbjct: 1 MATSGLRSCSAVGVPSLLAPSSNRSRLPVCAYA-----TTSGRVTM--SAEWMPGQPRPA 53

Query: 220 HLDGSSPGDFGFDPLGLAEVPENFARFKESELIHCRWAMLAVPGILLPEALGLGNWVDAQ 399
HLDGSSPGDFGFDPLGLA VPENF RFKESE+ HCRWAMLAVPG+L+PEALGLGNWV AQ
Sbjct: 54 HLDGSSPGDFGFDPLGLATVPENFERFKESEVYHCRWAMLAVPGVLVPEALGLGNWVQAQ 113

Query: 400 KWAATPGGHATYLGNPVPWGNLXXXXXXXXXXXXXXXXLRNEENDP 537
+WAA PGG ATYLGNPVPWG L R E DP
Sbjct: 114 EWAAEPGGQATYLGNPVPWGTLPTILVIEFVAIAFAEHQRTMEKDP 159


>tr|A2YCB9|A2YCB9_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_22755 PE=4 SV=1
Length = 241

Score = 190 bits (482), Expect = 5e-47
Identities = 97/166 (58%), Positives = 112/166 (67%), Gaps = 1/166 (0%)
Frame = +1

Query: 43 MASTSM-ACSHQLVPALSVPLPKSRFLGAPSFAPALACSNGSRLTCMASSEWLPGQPRPA 219
MA++ + +CS VP+L P L ++A + R+T S+EW+PGQPRPA
Sbjct: 1 MATSGLRSCSAVGVPSLLAPSSNRSRLPVCAYA-----TTSGRVTM--SAEWMPGQPRPA 53

Query: 220 HLDGSSPGDFGFDPLGLAEVPENFARFKESELIHCRWAMLAVPGILLPEALGLGNWVDAQ 399
HLDGSSPGDFGFDPLGLA VPENF RFKESE+ HCRWAMLAVPG+L+PEALGLGNWV AQ
Sbjct: 54 HLDGSSPGDFGFDPLGLATVPENFERFKESEVYHCRWAMLAVPGVLVPEALGLGNWVQAQ 113

Query: 400 KWAATPGGHATYLGNPVPWGNLXXXXXXXXXXXXXXXXLRNEENDP 537
+WAA PGG ATYLGNPVPWG L R E DP
Sbjct: 114 EWAAEPGGQATYLGNPVPWGTLPTILVIEFVAIAFAEHQRTMEKDP 159


>tr|B4FZL4|B4FZL4_MAIZE Chlorophyll a-b binding protein 6A OS=Zea
mays PE=2 SV=1
Length = 249

Score = 189 bits (479), Expect = 1e-46
Identities = 101/169 (59%), Positives = 113/169 (66%), Gaps = 3/169 (1%)
Frame = +1

Query: 40 AMASTSM---ACSHQLVPALSVPLPKSRFLGAPSFAPALACSNGSRLTCMASSEWLPGQP 210
AMAS+S +CS VP+L P S A A ++G R+T S+EW+PGQP
Sbjct: 2 AMASSSSGLRSCSALGVPSLLAPSTSSSSRSGRLPFCAHATTSG-RVTM--SAEWMPGQP 58

Query: 211 RPAHLDGSSPGDFGFDPLGLAEVPENFARFKESELIHCRWAMLAVPGILLPEALGLGNWV 390
RPAHLDGSSPGDFGFDPLGLA VPENF RFKESE+ HCRWAMLAVPG+L+PEALGLGNWV
Sbjct: 59 RPAHLDGSSPGDFGFDPLGLATVPENFERFKESEVYHCRWAMLAVPGVLVPEALGLGNWV 118

Query: 391 DAQKWAATPGGHATYLGNPVPWGNLXXXXXXXXXXXXXXXXLRNEENDP 537
AQ+WAA PGG ATYLG PVPWG L R E DP
Sbjct: 119 KAQEWAAVPGGQATYLGAPVPWGTLPTILAVEFVAIAFAEHQRTMEKDP 167