DK954928 |
Clone id |
TST39A01NGRL0021_M01 |
Library |
TST39 |
Length |
690 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0021_M01. 5' end sequence. |
Accession |
DK954928 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL1723Contig1 |
Sequence |
GTCGCAGGGGAAGTGAAAGCGTATCCCAACGATGGACTCGCTGTGTTTTCAAGTCTCTCA TCCCTTGCAGGCTCGGTCGCCCCCATTGAACCAATCGCTGTTCTTTGCTCCACCCATCTC TCCTCTCTCTTCGTCCTCCTCATTTCTCTTCATAAAAAGCCCGAAATACTACACGCTTAC TGCAAGGGCGAAGAGAGACAACTCCAAGCAGGAAGCCGCTCCAACAGCGGCTGCAGACAA AGGCAAGTCACCTGCCACTGCTAAAGAGGAGGATGAAGAGTATGAAGAGGTTGAGATTCC ATGGCTTCAAGAAAAAGCAGAGACTTTATATGAGAATGTTGGAGTTGCAGTAAATGCCAT ACCAGGTCCAAGAGTTGGCAGCACATCACTTCCATGGCTTCTTGCAGCCCCCATTGGCTA CCTCGGCATCACCTTTGTAATTGCGGTAGTGAAGACCGTGCTCAAGTATAGCTCCCCCAA AGCTAAAAGGCGTCGCCGAGTGGACCAAAATCTATTCTTGTGCACATCAATTGATGAGGT TTTTGCTTCAAGCAGATCTGATTTGGATAGCAAGGAGCTAAACTCATTGAAAAGCAAGAC AGGTTTTACAACACATGAGATTTTGCGGAAGTACATCAGATATGCCTTGAATGAGAAGCC CTTCGATCCAGATCTAGTGGCTAATCTGAT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
A5DDB7 |
Definition |
sp|A5DDB7|BYE1_PICGU Transcription factor BYE1 OS=Pichia guilliermondii |
Align length |
40 |
Score (bit) |
33.1 |
E-value |
1.4 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q9FNN4 |
Definition |
tr|Q9FNN4|Q9FNN4_ARATH Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MAH20 OS=Arabidopsis thaliana |
Align length |
174 |
Score (bit) |
167.0 |
E-value |
8.0e-40 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK954928|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0021_M01, 5' (690 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q9FNN4|Q9FNN4_ARATH Arabidopsis thaliana genomic DNA, chromos... 167 8e-40 tr|Q93VT6|Q93VT6_ARATH Putative uncharacterized protein At5g0854... 167 8e-40 tr|Q8LCU2|Q8LCU2_ARATH Putative uncharacterized protein OS=Arabi... 166 1e-39 tr|Q7XKI6|Q7XKI6_ORYSJ Os04g0527800 protein OS=Oryza sativa subs... 161 4e-38 tr|Q01HN9|Q01HN9_ORYSA OSIGBa0115K01-H0319F09.13 protein OS=Oryz... 161 4e-38 tr|B8ASC1|B8ASC1_ORYSI Putative uncharacterized protein OS=Oryza... 161 4e-38 tr|A3AVR8|A3AVR8_ORYSJ Putative uncharacterized protein OS=Oryza... 161 4e-38 tr|A7QNP1|A7QNP1_VITVI Chromosome undetermined scaffold_133, who... 159 1e-37 tr|A9TBF4|A9TBF4_PHYPA Predicted protein (Fragment) OS=Physcomit... 150 6e-35 tr|A5BDZ0|A5BDZ0_VITVI Putative uncharacterized protein OS=Vitis... 147 6e-34 tr|Q00VM5|Q00VM5_OSTTA RNA-binding protein RBM5 and related prot... 63 2e-08 tr|A4SBH3|A4SBH3_OSTLU Predicted protein (Fragment) OS=Ostreococ... 60 1e-07 tr|Q5B461|Q5B461_EMENI Putative uncharacterized protein OS=Emeri... 32 1.9 tr|A7EPQ5|A7EPQ5_SCLS1 Putative uncharacterized protein OS=Scler... 35 3.5 tr|A4WK74|A4WK74_PYRAR Sulfite reductase, dissimilatory-type bet... 34 7.6 tr|Q5YJI0|Q5YJI0_SHEEP CD80/B7-1 transmembrane form OS=Ovis arie... 34 10.0 tr|A3MW48|A3MW48_PYRCJ Sulfite reductase, dissimilatory-type bet... 34 10.0
>tr|Q9FNN4|Q9FNN4_ARATH Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MAH20 OS=Arabidopsis thaliana PE=4 SV=1 Length = 471
Score = 167 bits (422), Expect = 8e-40 Identities = 89/174 (51%), Positives = 114/174 (65%) Frame = +2
Query: 167 YYTLTARAKRDNSKQEAAPTAAADKGKSPATAKXXXXXXXXXXIPWLQEKAETLYENVGV 346 + +++A A + S+ APT AA K S + +PW+QEKA L E G Sbjct: 146 HISISAAAPKKKSETVTAPTPAAKKNSS---VEEETEEEVEEDMPWIQEKALDLVEFTGS 202
Query: 347 AVNAIPGPRVGSTSLPWLLAAPIGYLGITFVIAVVKTVLKYSSPKAKRRRRVDQNLFLCT 526 AIPGPRVGS+ LPW+LA P+ Y G+TFV A VKTV K+SSPKA+R++ V+QN LC Sbjct: 203 VSQAIPGPRVGSSKLPWMLAVPLAYAGVTFVTAFVKTVQKFSSPKAQRKKLVNQNAMLCR 262
Query: 527 SIDEVFASSRSDLDSKELNSLKSKTGFTTHEILRKYIRYALNEKPFDPDLVANL 688 SIDE+ + + S EL +L+ KT F EILRKYIRYALNEKPF+PDLVA+L Sbjct: 263 SIDELLRKA-GTVHSSELKALEQKTEFNMEEILRKYIRYALNEKPFNPDLVADL 315
>tr|Q93VT6|Q93VT6_ARATH Putative uncharacterized protein At5g08540 OS=Arabidopsis thaliana GN=At5g08540 PE=2 SV=1 Length = 346
Score = 167 bits (422), Expect = 8e-40 Identities = 89/174 (51%), Positives = 114/174 (65%) Frame = +2
Query: 167 YYTLTARAKRDNSKQEAAPTAAADKGKSPATAKXXXXXXXXXXIPWLQEKAETLYENVGV 346 + +++A A + S+ APT AA K S + +PW+QEKA L E G Sbjct: 44 HISISAAAPKKKSETVTAPTPAAKKNSS---VEEETEEEVEEDMPWIQEKALDLVEFTGS 100
Query: 347 AVNAIPGPRVGSTSLPWLLAAPIGYLGITFVIAVVKTVLKYSSPKAKRRRRVDQNLFLCT 526 AIPGPRVGS+ LPW+LA P+ Y G+TFV A VKTV K+SSPKA+R++ V+QN LC Sbjct: 101 VSQAIPGPRVGSSKLPWMLAVPLAYAGVTFVTAFVKTVQKFSSPKAQRKKLVNQNAMLCR 160
Query: 527 SIDEVFASSRSDLDSKELNSLKSKTGFTTHEILRKYIRYALNEKPFDPDLVANL 688 SIDE+ + + S EL +L+ KT F EILRKYIRYALNEKPF+PDLVA+L Sbjct: 161 SIDELLRKA-GTVHSSELKALEQKTEFNMEEILRKYIRYALNEKPFNPDLVADL 213
>tr|Q8LCU2|Q8LCU2_ARATH Putative uncharacterized protein OS=Arabidopsis thaliana PE=2 SV=1 Length = 346
Score = 166 bits (421), Expect = 1e-39 Identities = 89/174 (51%), Positives = 113/174 (64%) Frame = +2
Query: 167 YYTLTARAKRDNSKQEAAPTAAADKGKSPATAKXXXXXXXXXXIPWLQEKAETLYENVGV 346 + +++A A + S+ APT AA K S + +PW+QEKA L E G Sbjct: 44 HISISAAAPKKQSETVTAPTPAAKKNSS---VEEETEEEVEEDMPWIQEKALDLVEFTGS 100
Query: 347 AVNAIPGPRVGSTSLPWLLAAPIGYLGITFVIAVVKTVLKYSSPKAKRRRRVDQNLFLCT 526 AIPGPRVGS+ LPW+LA P+ Y G+TFV A VKTV K+SSPKA+R++ V+QN LC Sbjct: 101 VSQAIPGPRVGSSKLPWMLAVPLAYAGVTFVTAFVKTVQKFSSPKAQRKKLVNQNAMLCR 160
Query: 527 SIDEVFASSRSDLDSKELNSLKSKTGFTTHEILRKYIRYALNEKPFDPDLVANL 688 SIDE+ + S EL +L+ KT F EILRKYIRYALNEKPF+PDLVA+L Sbjct: 161 SIDELLRKD-GTVHSSELKALEQKTEFNMEEILRKYIRYALNEKPFNPDLVADL 213
>tr|Q7XKI6|Q7XKI6_ORYSJ Os04g0527800 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0038O10.22 PE=2 SV=2 Length = 338
Score = 161 bits (407), Expect = 4e-38 Identities = 79/171 (46%), Positives = 111/171 (64%) Frame = +2
Query: 176 LTARAKRDNSKQEAAPTAAADKGKSPATAKXXXXXXXXXXIPWLQEKAETLYENVGVAVN 355 L ARAKR S+ AA A+ P + +PW+Q+KA L E G Sbjct: 49 LVARAKRPGSRTAAASRQPANPSDVPKR-EADEEVEVEEEMPWIQDKALDLVEFTGTVTQ 107
Query: 356 AIPGPRVGSTSLPWLLAAPIGYLGITFVIAVVKTVLKYSSPKAKRRRRVDQNLFLCTSID 535 AIPGPRVGS+ +PWLLA P+ Y+G++FV+AVV+TV +++SP+ +++RRV +N+FL S+D Sbjct: 108 AIPGPRVGSSPVPWLLAVPLAYVGVSFVLAVVRTVRRFTSPRTQKKRRVSKNIFLLKSLD 167
Query: 536 EVFASSRSDLDSKELNSLKSKTGFTTHEILRKYIRYALNEKPFDPDLVANL 688 E+F R +D L L KTGF +++RKYIRY LNEKPF+PD+V +L Sbjct: 168 ELFQKGREAVDFPALQELMEKTGFDMDDVVRKYIRYTLNEKPFNPDVVVDL 218
>tr|Q01HN9|Q01HN9_ORYSA OSIGBa0115K01-H0319F09.13 protein OS=Oryza sativa GN=OSIGBa0115K01-H0319F09.13 PE=4 SV=1 Length = 338
Score = 161 bits (407), Expect = 4e-38 Identities = 79/171 (46%), Positives = 111/171 (64%) Frame = +2
Query: 176 LTARAKRDNSKQEAAPTAAADKGKSPATAKXXXXXXXXXXIPWLQEKAETLYENVGVAVN 355 L ARAKR S+ AA A+ P + +PW+Q+KA L E G Sbjct: 49 LVARAKRPGSRTAAASRQPANPSDVPKR-EADEEVEVEEEMPWIQDKALDLVEFTGTVTQ 107
Query: 356 AIPGPRVGSTSLPWLLAAPIGYLGITFVIAVVKTVLKYSSPKAKRRRRVDQNLFLCTSID 535 AIPGPRVGS+ +PWLLA P+ Y+G++FV+AVV+TV +++SP+ +++RRV +N+FL S+D Sbjct: 108 AIPGPRVGSSPVPWLLAVPLAYVGVSFVLAVVRTVRRFTSPRTQKKRRVSKNIFLLKSLD 167
Query: 536 EVFASSRSDLDSKELNSLKSKTGFTTHEILRKYIRYALNEKPFDPDLVANL 688 E+F R +D L L KTGF +++RKYIRY LNEKPF+PD+V +L Sbjct: 168 ELFQKGREAVDFPALQELMEKTGFDMDDVVRKYIRYTLNEKPFNPDVVVDL 218
>tr|B8ASC1|B8ASC1_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_16722 PE=4 SV=1 Length = 338
Score = 161 bits (407), Expect = 4e-38 Identities = 79/171 (46%), Positives = 111/171 (64%) Frame = +2
Query: 176 LTARAKRDNSKQEAAPTAAADKGKSPATAKXXXXXXXXXXIPWLQEKAETLYENVGVAVN 355 L ARAKR S+ AA A+ P + +PW+Q+KA L E G Sbjct: 49 LVARAKRPGSRTAAASRQPANPSDVPKR-EADEEVEVEEEMPWIQDKALDLVEFTGTVTQ 107
Query: 356 AIPGPRVGSTSLPWLLAAPIGYLGITFVIAVVKTVLKYSSPKAKRRRRVDQNLFLCTSID 535 AIPGPRVGS+ +PWLLA P+ Y+G++FV+AVV+TV +++SP+ +++RRV +N+FL S+D Sbjct: 108 AIPGPRVGSSPVPWLLAVPLAYVGVSFVLAVVRTVRRFTSPRTQKKRRVSKNIFLLKSLD 167
Query: 536 EVFASSRSDLDSKELNSLKSKTGFTTHEILRKYIRYALNEKPFDPDLVANL 688 E+F R +D L L KTGF +++RKYIRY LNEKPF+PD+V +L Sbjct: 168 ELFQKGREAVDFPALQELMEKTGFDMDDVVRKYIRYTLNEKPFNPDVVVDL 218
>tr|A3AVR8|A3AVR8_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_014890 PE=4 SV=1 Length = 368
Score = 161 bits (407), Expect = 4e-38 Identities = 79/171 (46%), Positives = 111/171 (64%) Frame = +2
Query: 176 LTARAKRDNSKQEAAPTAAADKGKSPATAKXXXXXXXXXXIPWLQEKAETLYENVGVAVN 355 L ARAKR S+ AA A+ P + +PW+Q+KA L E G Sbjct: 49 LVARAKRPGSRTAAASRQPANPSDVPKR-EADEEVEVEEEMPWIQDKALDLVEFTGTVTQ 107
Query: 356 AIPGPRVGSTSLPWLLAAPIGYLGITFVIAVVKTVLKYSSPKAKRRRRVDQNLFLCTSID 535 AIPGPRVGS+ +PWLLA P+ Y+G++FV+AVV+TV +++SP+ +++RRV +N+FL S+D Sbjct: 108 AIPGPRVGSSPVPWLLAVPLAYVGVSFVLAVVRTVRRFTSPRTQKKRRVSKNIFLLKSLD 167
Query: 536 EVFASSRSDLDSKELNSLKSKTGFTTHEILRKYIRYALNEKPFDPDLVANL 688 E+F R +D L L KTGF +++RKYIRY LNEKPF+PD+V +L Sbjct: 168 ELFQKGREAVDFPALQELMEKTGFDMDDVVRKYIRYTLNEKPFNPDVVVDL 218
>tr|A7QNP1|A7QNP1_VITVI Chromosome undetermined scaffold_133, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00002604001 PE=4 SV=1 Length = 345
Score = 159 bits (403), Expect = 1e-37 Identities = 77/131 (58%), Positives = 95/131 (72%) Frame = +2
Query: 296 IPWLQEKAETLYENVGVAVNAIPGPRVGSTSLPWLLAAPIGYLGITFVIAVVKTVLKYSS 475 +PW++EKA L E G AIPGPRVG +S PW+LA P+ Y GITFVIA V+TV K++S Sbjct: 88 LPWIEEKALDLVEFSGSVAQAIPGPRVGRSSFPWILAIPLAYAGITFVIAFVRTVQKFNS 147
Query: 476 PKAKRRRRVDQNLFLCTSIDEVFASSRSDLDSKELNSLKSKTGFTTHEILRKYIRYALNE 655 PK KRR+ V++N LC SIDEVF + R + LN L KTGF+ EI RKYIRYALNE Sbjct: 148 PKQKRRKLVNKNAMLCKSIDEVFLNGRDEELQSALNGLMQKTGFSREEIFRKYIRYALNE 207
Query: 656 KPFDPDLVANL 688 KPF+P++VA L Sbjct: 208 KPFNPEMVATL 218
>tr|A9TBF4|A9TBF4_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_45363 PE=4 SV=1 Length = 249
Score = 150 bits (380), Expect = 6e-35 Identities = 70/131 (53%), Positives = 95/131 (72%) Frame = +2
Query: 296 IPWLQEKAETLYENVGVAVNAIPGPRVGSTSLPWLLAAPIGYLGITFVIAVVKTVLKYSS 475 I W+QEKAE L G A++ +PGPRV T +PWL+A P+ YLGITFVIA V+T KY+S Sbjct: 10 ISWIQEKAEDLVIATGQAIDRVPGPRVAETRMPWLVALPLAYLGITFVIACVRTYKKYTS 69
Query: 476 PKAKRRRRVDQNLFLCTSIDEVFASSRSDLDSKELNSLKSKTGFTTHEILRKYIRYALNE 655 PK +R+R+V +N FL S+ E F + R +LD+ +L L +K F+ E+LRKY+RYALNE Sbjct: 70 PKGQRKRQVGKNAFLVESLGEYFPTKRDELDANKLQKLANKCNFSLGEVLRKYVRYALNE 129
Query: 656 KPFDPDLVANL 688 +PF P+ VA+L Sbjct: 130 RPFTPETVADL 140
>tr|A5BDZ0|A5BDZ0_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_030897 PE=4 SV=1 Length = 371
Score = 147 bits (371), Expect = 6e-34 Identities = 77/152 (50%), Positives = 95/152 (62%), Gaps = 21/152 (13%) Frame = +2
Query: 296 IPWLQEKAETLYENVGVAVNAIPGPRVGSTSLPWLLAAPIGYLGITFVIAVVKTVLKYSS 475 +PW++EKA L E G AIPGPRVG +S PW+LA P+ Y GITFVIA V+TV K++S Sbjct: 88 LPWIEEKALDLVEFSGSVAQAIPGPRVGRSSFPWILAIPLAYAGITFVIAFVRTVQKFNS 147
Query: 476 PKAKRRR---------------------RVDQNLFLCTSIDEVFASSRSDLDSKELNSLK 592 PK KRR+ V++N LC SIDEVF + R + LN L Sbjct: 148 PKQKRRKLVPVLLICFVYFLIFEDINSNDVNKNAMLCKSIDEVFLNGRDEELQSALNGLM 207
Query: 593 SKTGFTTHEILRKYIRYALNEKPFDPDLVANL 688 KTGF+ EI RKYIRYALNEKPF+P++VA L Sbjct: 208 QKTGFSREEIFRKYIRYALNEKPFNPEMVATL 239
|