DK954935
Clone id TST39A01NGRL0021_M08
Library
Length 657
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0021_M08. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence
CAACGACAACGCAGATTTCCTGCTGCCTGCAGCTTTCTGACGTTTTACAAACCCTAATTG
CAGCAAATACAGAGAGAAAAAGAGCGAGGAGAGCTCTCATGGTGCTTCTCTAACGCTAAC
CCAGGGTTGACATCCGGACCTCATAGTTTTCACTGAAGCTGACACAAAAATGGCACATGA
GCAGCAATTTGTTGCTAGGGATTTTATGGGGCTTGGCAAGATGGGAGACGTGCAGGAGAG
GGGTGAAAGCAAGGATGGTGGCATGCCTGTGAAGCTTCACGAAGGTGATTTGGGTCACCT
AAATGGACCACCAGCCTCCATCAACAATGGCATTCTTTACAATAACATGGCTTTTACAGG
TTTAAAACATCCTCTTTGGAGCAATGGTTCAAGCTTTCAACACCTTTTTTCTTCGGGGTA
TGTGCATGAGGACAAGCTTATTGAGCAGAGTGCAGAGAGTGCACCTGAACGAACATTCAT
GCCTCTTCCACATCCTGTGCAGGCATGGTGGCGGGCAGATCCTTTTATCAAACGCTCTCC
TACTACAGGTGATGAAGTTGGCCCTAAAACACAGGTGGTTGGCAGTTTTGGAGGGCTGTT
ACCCAAGAATGCCCAGTGTTTACCTACTCAAAATTCCCATGCACCTGCAGGTTTTGT
■■Homology search results ■■ -
sp_hit_id Q5TIA1
Definition sp|Q5TIA1|MEI1_HUMAN Meiosis inhibitor protein 1 OS=Homo sapiens
Align length 84
Score (bit) 30.8
E-value 6.5
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK954935|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0021_M08, 5'
(657 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q5TIA1|MEI1_HUMAN Meiosis inhibitor protein 1 OS=Homo sapiens... 31 6.5
sp|Q7PK92|LRC50_ANOGA Leucine-rich repeat-containing protein 50 ... 31 6.5
sp|Q9HGN6|DUS1_SCHPO tRNA-dihydrouridine synthase 1 OS=Schizosac... 30 8.5

>sp|Q5TIA1|MEI1_HUMAN Meiosis inhibitor protein 1 OS=Homo sapiens
GN=MEI1 PE=2 SV=2
Length = 1274

Score = 30.8 bits (68), Expect = 6.5
Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 5/84 (5%)
Frame = +3

Query: 384 MVQAFNTFFLRGMCMRTSLLSRVQRVHLNEHSCLFHILCRHGGGQI--LLSNALLLQVMK 557
M+ F +R + T L+S+ QRV ++ S LF +LC G + L L+ +
Sbjct: 65 MLSCFQDALVRHTSLVTQLVSQDQRVCIHFISVLFGLLCSMEDGSVTDLCIEVLIQITTQ 124

Query: 558 LALKHRWLAVLEGCYP---RMPSV 620
L L+ +L+ C+ MPS+
Sbjct: 125 LKLEQTIRCLLDECHKELCNMPSM 148


>sp|Q7PK92|LRC50_ANOGA Leucine-rich repeat-containing protein 50
homolog OS=Anopheles gambiae GN=AGAP009594 PE=3 SV=2
Length = 910

Score = 30.8 bits (68), Expect = 6.5
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -2

Query: 452 HSAQ*ACPHAHTPKKKGVESLNHCSKEDVLNL 357
H +Q C + H K +E+L HC + D LNL
Sbjct: 62 HQSQLRCLYLHNNLIKKIENLQHCKQLDTLNL 93


>sp|Q9HGN6|DUS1_SCHPO tRNA-dihydrouridine synthase 1
OS=Schizosaccharomyces pombe GN=dus1 PE=2 SV=1
Length = 399

Score = 30.4 bits (67), Expect = 8.5
Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 11/68 (16%)
Frame = +2

Query: 416 GYVHEDKLIEQSAESAPERTFMPLPHPVQAWWRADPFI---------KRSP--TTGDEVG 562
G ++EDK +++S + + + +PV WWR P+I KR P T DE
Sbjct: 337 GEINEDKDVKESVKDS-------MGYPVIPWWRVQPYIRPLEVPLVTKRKPVEVTADEGP 389

Query: 563 PKTQVVGS 586
K +V S
Sbjct: 390 VKKKVNAS 397


tr_hit_id Q55JP1
Definition tr|Q55JP1|Q55JP1_CRYNE Putative uncharacterized protein OS=Cryptococcus neoformans
Align length 117
Score (bit) 34.7
E-value 5.3
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK954935|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0021_M08, 5'
(657 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q55JP1|Q55JP1_CRYNE Putative uncharacterized protein OS=Crypt... 35 5.3

>tr|Q55JP1|Q55JP1_CRYNE Putative uncharacterized protein
OS=Cryptococcus neoformans GN=CNBK2920 PE=4 SV=1
Length = 552

Score = 34.7 bits (78), Expect = 5.3
Identities = 34/117 (29%), Positives = 47/117 (40%), Gaps = 9/117 (7%)
Frame = +2

Query: 305 GPPASINNGILYNNMAFTGLKHPLWSNGSSFQHLFSSGYV----HEDKLIEQSAESAPER 472
G AS+ G+ F G W GSS+ LFS V H+ L + A +
Sbjct: 328 GSMASVGLGLRLTRDPFKGTLLNGW-RGSSYNSLFSYLRVVPAGHDKPLSPRPAPPPSDD 386

Query: 473 TFMPLPH-PVQAWWRA----DPFIKRSPTTGDEVGPKTQVVGSFGGLLPKNAQCLPT 628
+ PL H P +W P+ KR+ G E G +TQ F ++ LPT
Sbjct: 387 IYAPLVHNPYIPFWHIWKPMTPWSKRNWDKGSEEGLRTQRPDYFAAVIQARITPLPT 443