DK954943 |
Clone id |
TST39A01NGRL0021_M16 |
Library |
TST39 |
Length |
596 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0021_M16. 5' end sequence. |
Accession |
DK954943 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL15Contig1 |
Sequence |
GTGTCAAGCCCTGCGCTAGGGTTTCATGCTCTCTTCAGGATGACCTCAAGGAGCTGGCGT CCAAGTGCAGTGAAGCTGGAAAGGTTGCTGCTGTGAGTCTGATCACCTCCGCGCTCATCG TCTCTGGAGCCAATGCAGAAGGCCCGCCAAAGAGGCTTTCCTACGATGAGCTGCAAGGTC TGACATACATGGAAGTCAAGGGAAGTGGTATTGCTAACCAGTGTCCTGTCATCAAGGGTG GAGCCGATGCCTTTGGTCTCAAGCCTGGCAAATATCAGCTCAAGAAGTTGTGCTTGGAGC CCACTTCTTTCAGGGTGAAAGCAGAGTCTCAGTTCAAGGGAGGAGCCCCAGACTTTCAGC CCACCAAGCTCATGACAAGGCTTACGTACACCCTGGATGAGATTGAAGGTCCTTTGGAGG TAGGTGCTGATGGGACTCTCAAATTTGAGGAGCAAGATGGAATCGACTATGCTGCAGTGA CCGTTCAGCTCCCTGGGGGTGAAAGGGTGCCCTTCTTGTTCACCATCAAGCAGCTTGTAG CCACAGGAAAGCCTGATGCCTTCAGTGGACAATTCTTGGTGCCTTCATACAGAGGT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P23322 |
Definition |
sp|P23322|PSBO_SOLLC Oxygen-evolving enhancer protein 1, chloroplastic OS=Solanum lycopersicum |
Align length |
193 |
Score (bit) |
301.0 |
E-value |
1.0e-81 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK954943|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0021_M16, 5' (596 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|P23322|PSBO_SOLLC Oxygen-evolving enhancer protein 1, chlorop... 301 1e-81 sp|P26320|PSBO_SOLTU Oxygen-evolving enhancer protein 1, chlorop... 299 6e-81 sp|Q40459|PSBO_TOBAC Oxygen-evolving enhancer protein 1, chlorop... 296 4e-80 sp|P14226|PSBO_PEA Oxygen-evolving enhancer protein 1, chloropla... 294 2e-79 sp|O49079|PSBO_FRIAG Oxygen-evolving enhancer protein 1, chlorop... 293 3e-79 sp|Q9S841|PSBO2_ARATH Oxygen-evolving enhancer protein 1-2, chlo... 290 3e-78 sp|P12359|PSBO_SPIOL Oxygen-evolving enhancer protein 1, chlorop... 289 8e-78 sp|P23321|PSBO1_ARATH Oxygen-evolving enhancer protein 1-1, chlo... 284 2e-76 sp|P27665|PSBO_WHEAT Oxygen-evolving enhancer protein 1, chlorop... 277 3e-74 sp|P12853|PSBO_CHLRE Oxygen-evolving enhancer protein 1, chlorop... 202 8e-52 sp|Q9SBN6|PSBO_VOLCA Oxygen-evolving enhancer protein 1, chlorop... 202 1e-51 sp|P46483|PSBO_EUGGR Oxygen-evolving enhancer protein 1, chlorop... 177 5e-44 sp|P0A431|PSBO_THEEB Photosystem II manganese-stabilizing polype... 135 1e-31 sp|P0A432|PSBO_SYNEN Photosystem II manganese-stabilizing polype... 135 1e-31 sp|P13907|PSBO_ANASP Photosystem II manganese-stabilizing polype... 133 6e-31 sp|Q9R6W6|PSBO_CYAA5 Photosystem II manganese-stabilizing polype... 121 3e-27 sp|P11472|PSBO_SYNE7 Photosystem II manganese-stabilizing polype... 120 7e-27 sp|P10549|PSBO_SYNY3 Photosystem II manganese-stabilizing polype... 114 5e-25 sp|P84989|PSBO_POPEU Oxygen-evolving enhancer protein 1, chlorop... 65 3e-10 sp|P83504|PSBO_BRARA Oxygen-evolving enhancer protein 1, chlorop... 54 5e-07 sp|P84718|PSBO_PINST Putative oxygen-evolving enhancer protein 1... 39 0.026 sp|P55198|AF17_HUMAN Protein AF-17 OS=Homo sapiens GN=MLLT6 PE=1... 33 1.1 sp|Q2KJ58|R3GEF_BOVIN Guanine nucleotide exchange factor for Rab... 32 1.9 sp|Q6Q7P4|41_CANFA Protein 4.1 OS=Canis familiaris GN=EPB41 PE=2... 31 4.1 sp|Q882P7|Y2578_PSESM UPF0343 protein PSPTO_2578 OS=Pseudomonas ... 31 5.4 sp|Q8K0B3|LRC66_MOUSE Leucine-rich repeat-containing protein 66 ... 31 5.4 sp|Q9P1Z9|K1529_HUMAN Uncharacterized protein KIAA1529 OS=Homo s... 31 5.4 sp|Q10038|VHP1_CAEEL Tyrosine-protein phosphatase vhp-1 OS=Caeno... 30 7.1 sp|P36186|TPI1_GIALA Triosephosphate isomerase OS=Giardia lambli... 30 7.1 sp|Q08B53|PRRCB_XENLA Protein PPRC1-B OS=Xenopus laevis GN=prrc1... 30 7.1
>sp|P23322|PSBO_SOLLC Oxygen-evolving enhancer protein 1, chloroplastic OS=Solanum lycopersicum GN=PSBO PE=2 SV=2 Length = 329
Score = 301 bits (772), Expect = 1e-81 Identities = 145/193 (75%), Positives = 165/193 (85%) Frame = +3
Query: 18 RVSCSLQDDLKELASKCSEAGKVAAVSLITSALIVSGANAEGPPKRLSYDELQGLTYMEV 197 R++CSLQ ++KELA KC++A K+A +L TSAL+VSGANAEG PKRL+YDE+Q TYMEV Sbjct: 43 RLTCSLQTEIKELAQKCTDAAKIAGFALATSALVVSGANAEGVPKRLTYDEIQSKTYMEV 102
Query: 198 KGSGIANQCPVIKGGADAFGLKPGKYQLKKLCLEPTSFRVKAESQFKGGAPDFQPTKLMT 377 KG+G ANQCP I+GG +F KPGKY KK CLEPTSF VKAE K APDFQ TKLMT Sbjct: 103 KGTGTANQCPTIEGGVGSFAFKPGKYTAKKFCLEPTSFTVKAEGVSKNSAPDFQKTKLMT 162
Query: 378 RLTYTLDEIEGPLEVGADGTLKFEEQDGIDYAAVTVQLPGGERVPFLFTIKQLVATGKPD 557 RLTYTLDEIEGP EV DGT+KFEE+DGIDYAAVTVQLPGGERVPFLFTIKQLVA+GKP+ Sbjct: 163 RLTYTLDEIEGPFEVSPDGTVKFEEKDGIDYAAVTVQLPGGERVPFLFTIKQLVASGKPE 222
Query: 558 AFSGQFLVPSYRG 596 +FSG+FLVPSYRG Sbjct: 223 SFSGEFLVPSYRG 235
>sp|P26320|PSBO_SOLTU Oxygen-evolving enhancer protein 1, chloroplastic OS=Solanum tuberosum GN=PSBO PE=2 SV=1 Length = 333
Score = 299 bits (766), Expect = 6e-81 Identities = 145/194 (74%), Positives = 163/194 (84%) Frame = +3
Query: 15 ARVSCSLQDDLKELASKCSEAGKVAAVSLITSALIVSGANAEGPPKRLSYDELQGLTYME 194 +R+SCSLQ DLK+ A KC++A K+A +L TSAL+VSGANAEG PKRL++DE+Q TYME Sbjct: 45 SRLSCSLQTDLKDFAQKCTDAAKIAGFALATSALVVSGANAEGVPKRLTFDEIQSKTYME 104
Query: 195 VKGSGIANQCPVIKGGADAFGLKPGKYQLKKLCLEPTSFRVKAESQFKGGAPDFQPTKLM 374 VKG+G ANQCP I GG D+F KPGKY KK CLEPTSF VKAE K APDFQ TKLM Sbjct: 105 VKGTGTANQCPTIDGGVDSFAFKPGKYNAKKFCLEPTSFTVKAEGVSKNSAPDFQKTKLM 164
Query: 375 TRLTYTLDEIEGPLEVGADGTLKFEEQDGIDYAAVTVQLPGGERVPFLFTIKQLVATGKP 554 TRLTYTLDEIEGP EV DGT+KFEE+DGIDYAAVTVQLPGGERVPFLFTIKQLVA+GKP Sbjct: 165 TRLTYTLDEIEGPFEVSPDGTVKFEEKDGIDYAAVTVQLPGGERVPFLFTIKQLVASGKP 224
Query: 555 DAFSGQFLVPSYRG 596 ++FS FLVPSYRG Sbjct: 225 ESFSVDFLVPSYRG 238
>sp|Q40459|PSBO_TOBAC Oxygen-evolving enhancer protein 1, chloroplastic OS=Nicotiana tabacum GN=PSBO PE=2 SV=1 Length = 332
Score = 296 bits (759), Expect = 4e-80 Identities = 145/194 (74%), Positives = 165/194 (85%) Frame = +3
Query: 15 ARVSCSLQDDLKELASKCSEAGKVAAVSLITSALIVSGANAEGPPKRLSYDELQGLTYME 194 AR++CSLQ +LK+LA K ++A KVA +L TSAL+VSGANAEG PKRL++DE+Q TYME Sbjct: 45 ARLTCSLQTELKDLAQKFTDAAKVAGFALATSALVVSGANAEGVPKRLTFDEIQSKTYME 104
Query: 195 VKGSGIANQCPVIKGGADAFGLKPGKYQLKKLCLEPTSFRVKAESQFKGGAPDFQPTKLM 374 VKG+G ANQCP I GG +F KPGKY KK CLEPTSF VKAES K PDFQ TKLM Sbjct: 105 VKGTGTANQCPTIDGGVASFAFKPGKYNAKKFCLEPTSFTVKAESVNKNAPPDFQKTKLM 164
Query: 375 TRLTYTLDEIEGPLEVGADGTLKFEEQDGIDYAAVTVQLPGGERVPFLFTIKQLVATGKP 554 TRLTYTLDEIEGP EV +DGT+KFEE+DGIDYAAVTVQLPGGERVPFLFTIKQLVA+GKP Sbjct: 165 TRLTYTLDEIEGPFEVSSDGTVKFEEKDGIDYAAVTVQLPGGERVPFLFTIKQLVASGKP 224
Query: 555 DAFSGQFLVPSYRG 596 ++FSG+FLVPSYRG Sbjct: 225 ESFSGEFLVPSYRG 238
>sp|P14226|PSBO_PEA Oxygen-evolving enhancer protein 1, chloroplastic OS=Pisum sativum GN=PSBO PE=2 SV=1 Length = 329
Score = 294 bits (753), Expect = 2e-79 Identities = 144/194 (74%), Positives = 163/194 (84%) Frame = +3
Query: 15 ARVSCSLQDDLKELASKCSEAGKVAAVSLITSALIVSGANAEGPPKRLSYDELQGLTYME 194 A+V+CSLQ D KELA KC EA K+A +L TSAL+VSGA+AEG PKRL++DE+Q TY+E Sbjct: 41 AKVTCSLQSDFKELAHKCVEASKIAGFALATSALVVSGASAEGAPKRLTFDEIQSKTYLE 100
Query: 195 VKGSGIANQCPVIKGGADAFGLKPGKYQLKKLCLEPTSFRVKAESQFKGGAPDFQPTKLM 374 VKG+G ANQCP I GG D+F KPGKY KKLCLEPTSF VK+E K FQ TKLM Sbjct: 101 VKGTGTANQCPTIDGGVDSFSFKPGKYNAKKLCLEPTSFTVKSEGVTKNTPLAFQNTKLM 160
Query: 375 TRLTYTLDEIEGPLEVGADGTLKFEEQDGIDYAAVTVQLPGGERVPFLFTIKQLVATGKP 554 TRLTYTLDEIEGP EV ADG++KFEE+DGIDYAAVTVQLPGGERVPFLFTIKQLVA+GKP Sbjct: 161 TRLTYTLDEIEGPFEVSADGSVKFEEKDGIDYAAVTVQLPGGERVPFLFTIKQLVASGKP 220
Query: 555 DAFSGQFLVPSYRG 596 D+FSG+FLVPSYRG Sbjct: 221 DSFSGEFLVPSYRG 234
>sp|O49079|PSBO_FRIAG Oxygen-evolving enhancer protein 1, chloroplastic OS=Fritillaria agrestis GN=PSBO PE=2 SV=1 Length = 329
Score = 293 bits (751), Expect = 3e-79 Identities = 139/193 (72%), Positives = 165/193 (85%) Frame = +3
Query: 18 RVSCSLQDDLKELASKCSEAGKVAAVSLITSALIVSGANAEGPPKRLSYDELQGLTYMEV 197 R++CS+ DL+++A KC++A K+A +L TSAL++SGA+AEG PKRL++DE+Q TYMEV Sbjct: 43 RLTCSINSDLRDIAQKCTDAAKLAGFALATSALVISGASAEGVPKRLTFDEIQSKTYMEV 102
Query: 198 KGSGIANQCPVIKGGADAFGLKPGKYQLKKLCLEPTSFRVKAESQFKGGAPDFQPTKLMT 377 KGSG ANQCP I+GG ++FG K GKY LKKLCLEPTSF VKAE K P+FQ TKLMT Sbjct: 103 KGSGTANQCPTIEGGTESFGYKTGKYTLKKLCLEPTSFTVKAEGINKNAPPEFQKTKLMT 162
Query: 378 RLTYTLDEIEGPLEVGADGTLKFEEQDGIDYAAVTVQLPGGERVPFLFTIKQLVATGKPD 557 RLTYTLDEIEGP EV DGT+KFEE+DGIDYAAVTVQLPGGERVPFLFT+KQLVATGKP+ Sbjct: 163 RLTYTLDEIEGPFEVAPDGTVKFEEKDGIDYAAVTVQLPGGERVPFLFTVKQLVATGKPE 222
Query: 558 AFSGQFLVPSYRG 596 +FSG +LVPSYRG Sbjct: 223 SFSGSYLVPSYRG 235
>sp|Q9S841|PSBO2_ARATH Oxygen-evolving enhancer protein 1-2, chloroplastic OS=Arabidopsis thaliana GN=PSBO2 PE=1 SV=1 Length = 331
Score = 290 bits (743), Expect = 3e-78 Identities = 139/194 (71%), Positives = 162/194 (83%) Frame = +3
Query: 15 ARVSCSLQDDLKELASKCSEAGKVAAVSLITSALIVSGANAEGPPKRLSYDELQGLTYME 194 AR++CSL DLK+ A KCS+A K+A +L TSAL+VSGA AEG PKRL+YDE+Q TYME Sbjct: 44 ARLTCSLHSDLKDFAGKCSDAAKIAGFALATSALVVSGAGAEGAPKRLTYDEIQSKTYME 103
Query: 195 VKGSGIANQCPVIKGGADAFGLKPGKYQLKKLCLEPTSFRVKAESQFKGGAPDFQPTKLM 374 VKG+G ANQCP I GG++ F K GKY KK C EPTSF VKA+S K PDFQ TKLM Sbjct: 104 VKGTGTANQCPTIDGGSETFSFKAGKYTGKKFCFEPTSFTVKADSVSKNAPPDFQNTKLM 163
Query: 375 TRLTYTLDEIEGPLEVGADGTLKFEEQDGIDYAAVTVQLPGGERVPFLFTIKQLVATGKP 554 TRLTYTLDEIEGP EVG+DG++KF+E+DGIDYAAVTVQLPGGERVPFLFT+KQL A+GKP Sbjct: 164 TRLTYTLDEIEGPFEVGSDGSVKFKEEDGIDYAAVTVQLPGGERVPFLFTVKQLEASGKP 223
Query: 555 DAFSGQFLVPSYRG 596 ++FSG+FLVPSYRG Sbjct: 224 ESFSGKFLVPSYRG 237
>sp|P12359|PSBO_SPIOL Oxygen-evolving enhancer protein 1, chloroplastic OS=Spinacia oleracea GN=PSBO PE=1 SV=1 Length = 332
Score = 289 bits (739), Expect = 8e-78 Identities = 143/193 (74%), Positives = 162/193 (83%) Frame = +3
Query: 18 RVSCSLQDDLKELASKCSEAGKVAAVSLITSALIVSGANAEGPPKRLSYDELQGLTYMEV 197 R+S SLQ DLKELA+KC +A K+A ++L TSALI SGANAEG KRL+YDE+Q TY+EV Sbjct: 45 RLSLSLQSDLKELANKCVDATKLAGLALATSALIASGANAEGG-KRLTYDEIQSKTYLEV 103
Query: 198 KGSGIANQCPVIKGGADAFGLKPGKYQLKKLCLEPTSFRVKAESQFKGGAPDFQPTKLMT 377 KG+G ANQCP ++GG D+F KPGKY KK CLEPT F VKAE K PDFQ TKLMT Sbjct: 104 KGTGTANQCPTVEGGVDSFAFKPGKYTAKKFCLEPTKFAVKAEGISKNSGPDFQNTKLMT 163
Query: 378 RLTYTLDEIEGPLEVGADGTLKFEEQDGIDYAAVTVQLPGGERVPFLFTIKQLVATGKPD 557 RLTYTLDEIEGP EV +DGT+KFEE+DGIDYAAVTVQLPGGERVPFLFTIKQLVA+GKP+ Sbjct: 164 RLTYTLDEIEGPFEVSSDGTVKFEEKDGIDYAAVTVQLPGGERVPFLFTIKQLVASGKPE 223
Query: 558 AFSGQFLVPSYRG 596 +FSG FLVPSYRG Sbjct: 224 SFSGDFLVPSYRG 236
>sp|P23321|PSBO1_ARATH Oxygen-evolving enhancer protein 1-1, chloroplastic OS=Arabidopsis thaliana GN=PSBO1 PE=1 SV=2 Length = 332
Score = 284 bits (727), Expect = 2e-76 Identities = 135/194 (69%), Positives = 160/194 (82%) Frame = +3
Query: 15 ARVSCSLQDDLKELASKCSEAGKVAAVSLITSALIVSGANAEGPPKRLSYDELQGLTYME 194 AR++CS Q D K+ KCS+A K+A +L TSAL+VSGA+AEG PKRL+YDE+Q TYME Sbjct: 45 ARLTCSFQSDFKDFTGKCSDAVKIAGFALATSALVVSGASAEGAPKRLTYDEIQSKTYME 104
Query: 195 VKGSGIANQCPVIKGGADAFGLKPGKYQLKKLCLEPTSFRVKAESQFKGGAPDFQPTKLM 374 VKG+G ANQCP I GG++ F KPGKY KK C EPTSF VKA+S K P+FQ TKLM Sbjct: 105 VKGTGTANQCPTIDGGSETFSFKPGKYAGKKFCFEPTSFTVKADSVSKNAPPEFQNTKLM 164
Query: 375 TRLTYTLDEIEGPLEVGADGTLKFEEQDGIDYAAVTVQLPGGERVPFLFTIKQLVATGKP 554 TRLTYTLDEIEGP EV +DG++ F+E+DGIDYAAVTVQLPGGERVPFLFT+KQL A+GKP Sbjct: 165 TRLTYTLDEIEGPFEVASDGSVNFKEEDGIDYAAVTVQLPGGERVPFLFTVKQLDASGKP 224
Query: 555 DAFSGQFLVPSYRG 596 D+F+G+FLVPSYRG Sbjct: 225 DSFTGKFLVPSYRG 238
>sp|P27665|PSBO_WHEAT Oxygen-evolving enhancer protein 1, chloroplastic OS=Triticum aestivum GN=PSBO PE=2 SV=1 Length = 325
Score = 277 bits (708), Expect = 3e-74 Identities = 138/194 (71%), Positives = 160/194 (82%) Frame = +3
Query: 15 ARVSCSLQDDLKELASKCSEAGKVAAVSLITSALIVSGANAEGPPKRLSYDELQGLTYME 194 AR++CSLQ D++E+ASKC++A K+A +L TSAL+VSGA AEG PKRL++DE+Q TYME Sbjct: 39 ARITCSLQSDIREVASKCADAAKMAGFALATSALLVSGATAEGAPKRLTFDEIQSKTYME 98
Query: 195 VKGSGIANQCPVIKGGADAFGLKPGKYQLKKLCLEPTSFRVKAESQFKGGAPDFQPTKLM 374 VKG+G ANQCP I GG D+F K GKY++KK CLEPTSF VKAE K P FQ TKLM Sbjct: 99 VKGTGTANQCPTIDGGVDSFPFKAGKYEMKKFCLEPTSFTVKAEGIQKNEPPRFQKTKLM 158
Query: 375 TRLTYTLDEIEGPLEVGADGTLKFEEQDGIDYAAVTVQLPGGERVPFLFTIKQLVATGKP 554 TRLTYTLDE+EGPLEV TLKFEE+DGIDYAAVTVQLPGGERV FLFT+KQLVATGKP Sbjct: 159 TRLTYTLDEMEGPLEVRRRRTLKFEEKDGIDYAAVTVQLPGGERVAFLFTVKQLVATGKP 218
Query: 555 DAFSGQFLVPSYRG 596 ++F FLVPSYRG Sbjct: 219 ESFR-PFLVPSYRG 231
>sp|P12853|PSBO_CHLRE Oxygen-evolving enhancer protein 1, chloroplastic OS=Chlamydomonas reinhardtii GN=PSBO PE=2 SV=1 Length = 291
Score = 202 bits (515), Expect = 8e-52 Identities = 102/179 (56%), Positives = 126/179 (70%), Gaps = 1/179 (0%) Frame = +3
Query: 63 KCSEAGKVAAVSLITSALIVSGANAEGPPKRLSYDELQGLTYMEVKGSGIANQCPVIKGG 242 K + G+ AA + + +A++ ANA L++DE+QGLTY++VKGSGIAN CPV++ G Sbjct: 27 KAQKVGQAAAAAALATAMVAGSANA------LTFDEIQGLTYLQVKGSGIANTCPVLESG 80
Query: 243 ADAFG-LKPGKYQLKKLCLEPTSFRVKAESQFKGGAPDFQPTKLMTRLTYTLDEIEGPLE 419 LK G Y+L+ C+EPTSF VK ESQFKGG +F TKLMTRLTYTLD + G + Sbjct: 81 TTNLKELKAGSYKLENFCIEPTSFTVKEESQFKGGETEFVKTKLMTRLTYTLDAMSGSFK 140
Query: 420 VGADGTLKFEEQDGIDYAAVTVQLPGGERVPFLFTIKQLVATGKPDAFSGQFLVPSYRG 596 VG+DG+ + +E DGIDYAA TVQLPGGERV FLFTIKQ G D G FLVPSYRG Sbjct: 141 VGSDGSAELKEDDGIDYAATTVQLPGGERVAFLFTIKQFDGKGTLDGIKGDFLVPSYRG 199
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B4F9R9 |
Definition |
tr|B4F9R9|B4F9R9_MAIZE Oxygen-evolving enhancer protein 1 OS=Zea mays |
Align length |
194 |
Score (bit) |
304.0 |
E-value |
2.0e-81 |
Report |
|