DK955010 |
Clone id |
TST39A01NGRL0021_P11 |
Library |
TST39 |
Length |
663 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0021_P11. 5' end sequence. |
Accession |
DK955010 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL2502Contig1 |
Sequence |
GTTAGAAGGGGCAAAGGCAACCACTGAAACTGTTGATGCTCTAAGAACAGGCGCATCAGC TATGAAAGCAATGCACAAATCTACGTATGCTGCTACTTTCCCTCTGCCCTTGAGCACTTT TTGTTTGAAGCTTGGAGCTAAAATTTGCAACCTGTGCAGGAATATCGATGATGTGGACAA GACTATGGATGAGATAAATGAACAGACCGAGAACATGAAACAGATTCAGGAGGCGCTGTC AGCACCAATCGGAGCGGCGGCTGACTTTGATGAGGTCTCGATATACATAATTAACGTATG CTTTGATTGAATGCAGCAGGGCCTGATTTGAGTTTATGAATACCAGGATGAATTGGATGC CGAGCTAGCAGAGCTGGAGGGTGCAGATCTAGAGGAGCAACTGCTCCAGCCAGCGACTAG TGCTCCTATTCCTGAACTCCCTTCGGTGGCAGCAAAGCAGCCGGCTCGGCCTCACAAGTT GCCTGCACATTCTAAGGCTGAAGATGAAGAACTTGCAGCATTGCAGGCAGAGATGGCTTT GTGAACCACTGAGTGCAAAGTGCAAAGCTGGTATGTGTTTTGGATGGTTGATTCTTGCCC ATTTCCAGATGCTGTTCAACAGTTGGCGCTTCATGCATATATTGTTTACATACCTTCCAA GAT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q6CJL0 |
Definition |
sp|Q6CJL0|SNF7_KLULA Vacuolar-sorting protein SNF7 OS=Kluyveromyces lactis |
Align length |
91 |
Score (bit) |
49.3 |
E-value |
2.0e-05 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q9SZE4 |
Definition |
tr|Q9SZE4|Q9SZE4_ARATH Putative uncharacterized protein F19B15.190 (Putative uncharacterized protein At4g29160; F19B15.190) (Putative uncharacterized protein AT4g29160) OS=Arabidopsis thaliana |
Align length |
160 |
Score (bit) |
110.0 |
E-value |
6.0e-23 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK955010|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0021_P11, 5' (663 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q9SZE4|Q9SZE4_ARATH Putative uncharacterized protein F19B15.1... 110 6e-23 tr|Q8L9C3|Q8L9C3_ARATH Copia-like retroelement pol polyprotein O... 110 6e-23 tr|Q3E9U7|Q3E9U7_ARATH Uncharacterized protein At4g29160.2 OS=Ar... 110 6e-23 tr|B7FMB1|B7FMB1_MEDTR Putative uncharacterized protein OS=Medic... 109 1e-22 tr|A5BR24|A5BR24_VITVI Putative uncharacterized protein OS=Vitis... 109 2e-22 tr|A5B271|A5B271_VITVI Putative uncharacterized protein (Chromos... 109 2e-22 tr|A5C1M4|A5C1M4_VITVI Putative uncharacterized protein (Chromos... 106 1e-21 tr|A9NYW6|A9NYW6_PICSI Putative uncharacterized protein OS=Picea... 106 1e-21 tr|Q69V59|Q69V59_ORYSJ Os06g0608500 protein OS=Oryza sativa subs... 105 2e-21 tr|Q0J328|Q0J328_ORYSJ Os09g0267600 protein OS=Oryza sativa subs... 105 2e-21 tr|B6TIJ7|B6TIJ7_MAIZE Charged multivesicular body protein 4b OS... 105 2e-21 tr|B4F8J0|B4F8J0_MAIZE Putative uncharacterized protein OS=Zea m... 105 2e-21 tr|A3BWP3|A3BWP3_ORYSJ Putative uncharacterized protein OS=Oryza... 105 2e-21 tr|A2YZ57|A2YZ57_ORYSI Putative uncharacterized protein OS=Oryza... 105 2e-21 tr|A2YEW4|A2YEW4_ORYSI Putative uncharacterized protein OS=Oryza... 105 2e-21 tr|B4FNG0|B4FNG0_MAIZE Putative uncharacterized protein OS=Zea m... 104 6e-21 tr|B4FGC0|B4FGC0_MAIZE Charged multivesicular body protein 4b OS... 104 6e-21 tr|A9NS88|A9NS88_PICSI Putative uncharacterized protein OS=Picea... 104 6e-21 tr|B6T0C3|B6T0C3_MAIZE Charged multivesicular body protein 4b OS... 103 7e-21 tr|B4F8L9|B4F8L9_MAIZE Putative uncharacterized protein OS=Zea m... 103 7e-21 tr|B6UES0|B6UES0_MAIZE Charged multivesicular body protein 4b OS... 103 1e-20 tr|A9STY2|A9STY2_PHYPA Predicted protein OS=Physcomitrella paten... 102 2e-20 tr|O82197|O82197_ARATH Copia-like retroelement pol polyprotein (... 102 3e-20 tr|B7FGK7|B7FGK7_MEDTR Putative uncharacterized protein OS=Medic... 97 1e-18 tr|Q2RB64|Q2RB64_ORYSJ Os11g0123500 protein OS=Oryza sativa subs... 84 8e-15 tr|Q2QYF7|Q2QYF7_ORYSJ SNF7 family protein, expressed OS=Oryza s... 84 8e-15 tr|Q0IQH1|Q0IQH1_ORYSJ Os12g0121400 protein OS=Oryza sativa subs... 84 8e-15 tr|B8BP02|B8BP02_ORYSI Putative uncharacterized protein OS=Oryza... 84 8e-15 tr|B8BIT3|B8BIT3_ORYSI Putative uncharacterized protein OS=Oryza... 84 8e-15 tr|A3CEG0|A3CEG0_ORYSJ Putative uncharacterized protein OS=Oryza... 84 8e-15
>tr|Q9SZE4|Q9SZE4_ARATH Putative uncharacterized protein F19B15.190 (Putative uncharacterized protein At4g29160; F19B15.190) (Putative uncharacterized protein AT4g29160) OS=Arabidopsis thaliana GN=F19B15.190 PE=2 SV=1 Length = 219
Score = 110 bits (276), Expect = 6e-23 Identities = 74/160 (46%), Positives = 90/160 (56%), Gaps = 3/160 (1%) Frame = +2
Query: 2 LEGAKATTETVDALRTGASAMKAMHKSTYAATFPLPLSTFCLKLGAKICNLCRNIDDVDK 181 LEGAKATTETVDALR+GASAMKAM K+T NIDDVDK Sbjct: 90 LEGAKATTETVDALRSGASAMKAMQKAT-------------------------NIDDVDK 124
Query: 182 TMDEINEQTENMKQIQEALSAPIGAAADF--DEVSIYIINVCFD*MQQGLI*VYEYXXXX 355 TMDEINEQTENMKQIQEAL+ P+GAAADF DE++ + + + ++ L+ Sbjct: 125 TMDEINEQTENMKQIQEALATPMGAAADFDEDELAAELDELESEELESQLL--------- 175
Query: 356 XXXXXXXXXXXXXXXXXXPATSA-PIPELPSVAAKQPARP 472 PAT+A P+P +P A +QPARP Sbjct: 176 -----------------QPATTAPPLPSVPVPAGRQPARP 198
>tr|Q8L9C3|Q8L9C3_ARATH Copia-like retroelement pol polyprotein OS=Arabidopsis thaliana PE=2 SV=1 Length = 218
Score = 110 bits (276), Expect = 6e-23 Identities = 74/160 (46%), Positives = 90/160 (56%), Gaps = 3/160 (1%) Frame = +2
Query: 2 LEGAKATTETVDALRTGASAMKAMHKSTYAATFPLPLSTFCLKLGAKICNLCRNIDDVDK 181 LEGAKATTETVDALR+GASAMKAM K+T NIDDVDK Sbjct: 89 LEGAKATTETVDALRSGASAMKAMQKAT-------------------------NIDDVDK 123
Query: 182 TMDEINEQTENMKQIQEALSAPIGAAADF--DEVSIYIINVCFD*MQQGLI*VYEYXXXX 355 TMDEINEQTENMKQIQEAL+ P+GAAADF DE++ + + + ++ L+ Sbjct: 124 TMDEINEQTENMKQIQEALATPMGAAADFDEDELAAELDELESEELESQLL--------- 174
Query: 356 XXXXXXXXXXXXXXXXXXPATSA-PIPELPSVAAKQPARP 472 PAT+A P+P +P A +QPARP Sbjct: 175 -----------------QPATTAPPLPSVPVPAGRQPARP 197
>tr|Q3E9U7|Q3E9U7_ARATH Uncharacterized protein At4g29160.2 OS=Arabidopsis thaliana GN=At4g29160 PE=4 SV=1 Length = 192
Score = 110 bits (276), Expect = 6e-23 Identities = 74/160 (46%), Positives = 90/160 (56%), Gaps = 3/160 (1%) Frame = +2
Query: 2 LEGAKATTETVDALRTGASAMKAMHKSTYAATFPLPLSTFCLKLGAKICNLCRNIDDVDK 181 LEGAKATTETVDALR+GASAMKAM K+T NIDDVDK Sbjct: 63 LEGAKATTETVDALRSGASAMKAMQKAT-------------------------NIDDVDK 97
Query: 182 TMDEINEQTENMKQIQEALSAPIGAAADF--DEVSIYIINVCFD*MQQGLI*VYEYXXXX 355 TMDEINEQTENMKQIQEAL+ P+GAAADF DE++ + + + ++ L+ Sbjct: 98 TMDEINEQTENMKQIQEALATPMGAAADFDEDELAAELDELESEELESQLL--------- 148
Query: 356 XXXXXXXXXXXXXXXXXXPATSA-PIPELPSVAAKQPARP 472 PAT+A P+P +P A +QPARP Sbjct: 149 -----------------QPATTAPPLPSVPVPAGRQPARP 171
>tr|B7FMB1|B7FMB1_MEDTR Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1 Length = 206
Score = 109 bits (273), Expect = 1e-22 Identities = 74/157 (47%), Positives = 81/157 (51%) Frame = +2
Query: 2 LEGAKATTETVDALRTGASAMKAMHKSTYAATFPLPLSTFCLKLGAKICNLCRNIDDVDK 181 LEGAKATTETVDALRTGA+ MKAM K+T NIDDVDK Sbjct: 92 LEGAKATTETVDALRTGAATMKAMQKAT-------------------------NIDDVDK 126
Query: 182 TMDEINEQTENMKQIQEALSAPIGAAADFDEVSIYIINVCFD*MQQGLI*VYEYXXXXXX 361 TMDEINEQTENMKQIQEALSAPIGAAADFDE D ++ L Sbjct: 127 TMDEINEQTENMKQIQEALSAPIGAAADFDE----------DELEAEL------------ 164
Query: 362 XXXXXXXXXXXXXXXXPATSAPIPELPSVAAKQPARP 472 P +AP P + A +QPARP Sbjct: 165 --EELESAELEEQLLQPTFTAPAPSMQVPAGRQPARP 199
>tr|A5BR24|A5BR24_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_026042 PE=4 SV=1 Length = 216
Score = 109 bits (272), Expect = 2e-22 Identities = 62/91 (68%), Positives = 64/91 (70%) Frame = +2
Query: 2 LEGAKATTETVDALRTGASAMKAMHKSTYAATFPLPLSTFCLKLGAKICNLCRNIDDVDK 181 LEGAKATTETVDALRTGASAMKAM K+T NIDDVDK Sbjct: 90 LEGAKATTETVDALRTGASAMKAMQKAT-------------------------NIDDVDK 124
Query: 182 TMDEINEQTENMKQIQEALSAPIGAAADFDE 274 TMDEINEQTENMKQIQEAL+ PIGAAADFDE Sbjct: 125 TMDEINEQTENMKQIQEALATPIGAAADFDE 155
>tr|A5B271|A5B271_VITVI Putative uncharacterized protein (Chromosome chr9 scaffold_7, whole genome shotgun sequence) OS=Vitis vinifera GN=GSVIVT00034232001 PE=4 SV=1 Length = 220
Score = 109 bits (272), Expect = 2e-22 Identities = 73/157 (46%), Positives = 82/157 (52%) Frame = +2
Query: 2 LEGAKATTETVDALRTGASAMKAMHKSTYAATFPLPLSTFCLKLGAKICNLCRNIDDVDK 181 LEGAKATTETVDALRTGA+AMK MHK+T NIDD+DK Sbjct: 92 LEGAKATTETVDALRTGAAAMKTMHKTT-------------------------NIDDLDK 126
Query: 182 TMDEINEQTENMKQIQEALSAPIGAAADFDEVSIYIINVCFD*MQQGLI*VYEYXXXXXX 361 TMDEINEQTENMKQIQEALS PIG+AADFDE D ++ L Sbjct: 127 TMDEINEQTENMKQIQEALSTPIGSAADFDE----------DELEAEL------------ 164
Query: 362 XXXXXXXXXXXXXXXXPATSAPIPELPSVAAKQPARP 472 P T+AP + AA+QPARP Sbjct: 165 --EELEGAELEEQLLQPTTTAPAAPVSIPAARQPARP 199
>tr|A5C1M4|A5C1M4_VITVI Putative uncharacterized protein (Chromosome chr11 scaffold_13, whole genome shotgun sequence) OS=Vitis vinifera GN=GSVIVT00016618001 PE=4 SV=1 Length = 218
Score = 106 bits (265), Expect = 1e-21 Identities = 60/91 (65%), Positives = 64/91 (70%) Frame = +2
Query: 2 LEGAKATTETVDALRTGASAMKAMHKSTYAATFPLPLSTFCLKLGAKICNLCRNIDDVDK 181 LEGAKATTETVDALRTGA+AMKAM K+T NIDDVD+ Sbjct: 90 LEGAKATTETVDALRTGAAAMKAMQKAT-------------------------NIDDVDQ 124
Query: 182 TMDEINEQTENMKQIQEALSAPIGAAADFDE 274 TMDEINEQTENMKQIQEALS PIG+AADFDE Sbjct: 125 TMDEINEQTENMKQIQEALSTPIGSAADFDE 155
>tr|A9NYW6|A9NYW6_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 217
Score = 106 bits (264), Expect = 1e-21 Identities = 61/91 (67%), Positives = 63/91 (69%) Frame = +2
Query: 2 LEGAKATTETVDALRTGASAMKAMHKSTYAATFPLPLSTFCLKLGAKICNLCRNIDDVDK 181 LEGAKATTETV ALRTGASAMKAM K+T NIDDVDK Sbjct: 91 LEGAKATTETVAALRTGASAMKAMQKAT-------------------------NIDDVDK 125
Query: 182 TMDEINEQTENMKQIQEALSAPIGAAADFDE 274 TMDEINEQTENMKQIQEAL+ PIGAAADFDE Sbjct: 126 TMDEINEQTENMKQIQEALATPIGAAADFDE 156
>tr|Q69V59|Q69V59_ORYSJ Os06g0608500 protein OS=Oryza sativa subsp. japonica GN=P0556B08.16 PE=2 SV=1 Length = 220
Score = 105 bits (262), Expect = 2e-21 Identities = 59/91 (64%), Positives = 63/91 (69%) Frame = +2
Query: 2 LEGAKATTETVDALRTGASAMKAMHKSTYAATFPLPLSTFCLKLGAKICNLCRNIDDVDK 181 LEGAKATTETVDALRTGASAMKAMHK+T NIDDVDK Sbjct: 95 LEGAKATTETVDALRTGASAMKAMHKAT-------------------------NIDDVDK 129
Query: 182 TMDEINEQTENMKQIQEALSAPIGAAADFDE 274 TMDEIN+ ENM+QIQ+ LSAPIGAAADFDE Sbjct: 130 TMDEINDNMENMRQIQDLLSAPIGAAADFDE 160
>tr|Q0J328|Q0J328_ORYSJ Os09g0267600 protein OS=Oryza sativa subsp. japonica GN=Os09g0267600 PE=2 SV=1 Length = 220
Score = 105 bits (262), Expect = 2e-21 Identities = 59/91 (64%), Positives = 64/91 (70%) Frame = +2
Query: 2 LEGAKATTETVDALRTGASAMKAMHKSTYAATFPLPLSTFCLKLGAKICNLCRNIDDVDK 181 LE AKATTETVDALRTGA+AMKAM K+T NIDDVDK Sbjct: 92 LEAAKATTETVDALRTGAAAMKAMQKAT-------------------------NIDDVDK 126
Query: 182 TMDEINEQTENMKQIQEALSAPIGAAADFDE 274 TMDEINEQTENMKQIQ+ALSAP+GA+ADFDE Sbjct: 127 TMDEINEQTENMKQIQDALSAPLGASADFDE 157
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