DK955026 |
Clone id |
TST39A01NGRL0022_A03 |
Library |
TST39 |
Length |
627 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0022_A03. 5' end sequence. |
Accession |
DK955026 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL980Contig1 |
Sequence |
CGTAGCCATCGCAAGAGCAGTGGCGCCATTCTGGCTCTCGTCTTCTATATATGGTCTTTG ATCAAAGCTAACATCGCATGCTTACAGAATTCACAGAAAGACTGTTTCTTATTTTGGTGC CAAATAGGGCATGAGGTTCATTGGAATGATTAAGAGATGGAGAAGAGTGCATTGGACTGT CCCTACCCGGGATGCTTCTTTTGTGTCATGAAAGAGGCAAACCCCACGAAGCGCCGTGCC AGTGTATCGAAATTTTTTAAGGAGTTTCCCAGCCAAGATGAGGAAGGGCAGGTCCTTGCT GTCAGCGGGCTTTGGAATACCGCAATGGCGCACCCCAATGATCCTGAGTTCATTGAGCTG GGAGTATTTGAGTGCATGGAAGCCCTTATTTGGAAAGGGATCAAGAACAGGCAATGGCTA GCAAAGGATCAGAACATCTACATTCCTTATTATGCTGCCCATATTATTGGCTCTTACACT ATGAATATTGAGGAGTTCGCAGAAAGGGCAGTCAGGGCAGGTGTTATTCAGCCATTGGTA GAGCTACTTCGAGGGAGGCTGACCTGGGTGGAGCAGAGGGTGGCTGTACGAGCACTAGGC CACCTGGGAACCTATGATTCCACTTTT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
O60179 |
Definition |
sp|O60179|UTP10_SCHPO U3 small nucleolar RNA-associated protein 10 OS=Schizosaccharomyces pombe |
Align length |
127 |
Score (bit) |
35.8 |
E-value |
0.19 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q6L4Y6 |
Definition |
tr|Q6L4Y6|Q6L4Y6_ORYSJ Os05g0421300 protein OS=Oryza sativa subsp. japonica |
Align length |
157 |
Score (bit) |
290.0 |
E-value |
5.0e-77 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK955026|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0022_A03, 5' (627 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q6L4Y6|Q6L4Y6_ORYSJ Os05g0421300 protein OS=Oryza sativa subs... 290 5e-77 tr|B8AYC8|B8AYC8_ORYSI Putative uncharacterized protein OS=Oryza... 290 5e-77 tr|A3B457|A3B457_ORYSJ Putative uncharacterized protein OS=Oryza... 290 5e-77 tr|A7R002|A7R002_VITVI Chromosome chr7 scaffold_294, whole genom... 284 3e-75 tr|A5C8E6|A5C8E6_VITVI Putative uncharacterized protein OS=Vitis... 284 3e-75 tr|A9SVL4|A9SVL4_PHYPA Predicted protein OS=Physcomitrella paten... 281 2e-74 tr|Q9LX10|Q9LX10_ARATH Putative uncharacterized protein T31P16_1... 280 7e-74 tr|Q0WMT6|Q0WMT6_ARATH Putative uncharacterized protein At5g1020... 280 7e-74 tr|Q4ABQ0|Q4ABQ0_BRARP 80A08_17 OS=Brassica rapa subsp. pekinens... 279 9e-74 tr|B7U9S2|B7U9S2_CARAS AT5G10200-like protein OS=Cardaminopsis a... 279 9e-74 tr|A9THA5|A9THA5_PHYPA Predicted protein OS=Physcomitrella paten... 246 6e-64 tr|A7PLL7|A7PLL7_VITVI Chromosome chr7 scaffold_20, whole genome... 207 5e-52 tr|A7NU61|A7NU61_VITVI Chromosome chr18 scaffold_1, whole genome... 199 1e-49 tr|A5B9D4|A5B9D4_VITVI Putative uncharacterized protein OS=Vitis... 199 1e-49 tr|Q9SN15|Q9SN15_ARATH Putative uncharacterized protein F3A4.110... 186 1e-45 tr|Q9FMH1|Q9FMH1_ARATH Similarity to unknown protein OS=Arabidop... 157 6e-37 tr|Q8H061|Q8H061_ORYSJ Putative uncharacterized protein OSJNBa00... 144 3e-33 tr|B8AQG6|B8AQG6_ORYSI Putative uncharacterized protein OS=Oryza... 144 3e-33 tr|A3AFB3|A3AFB3_ORYSJ Putative uncharacterized protein OS=Oryza... 136 9e-31 tr|Q70JP1|Q70JP1_WHEAT Putative uncharacterized protein (Fragmen... 45 0.003 tr|B6A9W1|B6A9W1_9CRYT RNA-metabolising metallo-beta-lactamase f... 35 3.7 tr|A4S8D9|A4S8D9_OSTLU Predicted protein OS=Ostreococcus lucimar... 34 6.3 tr|B4P546|B4P546_DROYA GE13968 OS=Drosophila yakuba GN=GE13968 P... 34 8.1 tr|B3NMM6|B3NMM6_DROER GG21025 OS=Drosophila erecta GN=GG21025 P... 34 8.1 tr|B2B4H6|B2B4H6_PODAN Predicted CDS Pa_2_1300 OS=Podospora anse... 34 8.2
>tr|Q6L4Y6|Q6L4Y6_ORYSJ Os05g0421300 protein OS=Oryza sativa subsp. japonica GN=OSJNBb0092E21.8 PE=2 SV=1 Length = 601
Score = 290 bits (742), Expect = 5e-77 Identities = 135/157 (85%), Positives = 145/157 (92%) Frame = +1
Query: 157 MEKSALDCPYPGCFFCVMKEANPTKRRASVSKFFKEFPSQDEEGQVLAVSGLWNTAMAHP 336 MEK DCPYPGCFFCVMKEANP+KRRASV KFF+E PSQD++GQVL +SGLWNTAMAHP Sbjct: 1 MEKIQSDCPYPGCFFCVMKEANPSKRRASVLKFFRELPSQDDDGQVLPISGLWNTAMAHP 60
Query: 337 NDPEFIELGVFECMEALIWKGIKNRQWLAKDQNIYIPYYAAHIIGSYTMNIEEFAERAVR 516 NDPEFI LG+FECM ALIWKG+KNR+WL+ DQNIYIPYYAAHIIGSYTMN+EEFAERAVR Sbjct: 61 NDPEFINLGIFECMSALIWKGLKNRRWLSHDQNIYIPYYAAHIIGSYTMNMEEFAERAVR 120
Query: 517 AGVIQPLVELLRGRLTWVEQRVAVRALGHLGTYDSTF 627 AGVI PLVELLRGRLTWVEQRVAVRALGHL TY STF Sbjct: 121 AGVIPPLVELLRGRLTWVEQRVAVRALGHLATYPSTF 157
>tr|B8AYC8|B8AYC8_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_20013 PE=4 SV=1 Length = 601
Score = 290 bits (742), Expect = 5e-77 Identities = 135/157 (85%), Positives = 145/157 (92%) Frame = +1
Query: 157 MEKSALDCPYPGCFFCVMKEANPTKRRASVSKFFKEFPSQDEEGQVLAVSGLWNTAMAHP 336 MEK DCPYPGCFFCVMKEANP+KRRASV KFF+E PSQD++GQVL +SGLWNTAMAHP Sbjct: 1 MEKIQSDCPYPGCFFCVMKEANPSKRRASVLKFFRELPSQDDDGQVLPISGLWNTAMAHP 60
Query: 337 NDPEFIELGVFECMEALIWKGIKNRQWLAKDQNIYIPYYAAHIIGSYTMNIEEFAERAVR 516 NDPEFI LG+FECM ALIWKG+KNR+WL+ DQNIYIPYYAAHIIGSYTMN+EEFAERAVR Sbjct: 61 NDPEFINLGIFECMSALIWKGLKNRRWLSHDQNIYIPYYAAHIIGSYTMNMEEFAERAVR 120
Query: 517 AGVIQPLVELLRGRLTWVEQRVAVRALGHLGTYDSTF 627 AGVI PLVELLRGRLTWVEQRVAVRALGHL TY STF Sbjct: 121 AGVIPPLVELLRGRLTWVEQRVAVRALGHLATYPSTF 157
>tr|A3B457|A3B457_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_017829 PE=4 SV=1 Length = 540
Score = 290 bits (742), Expect = 5e-77 Identities = 135/157 (85%), Positives = 145/157 (92%) Frame = +1
Query: 157 MEKSALDCPYPGCFFCVMKEANPTKRRASVSKFFKEFPSQDEEGQVLAVSGLWNTAMAHP 336 MEK DCPYPGCFFCVMKEANP+KRRASV KFF+E PSQD++GQVL +SGLWNTAMAHP Sbjct: 1 MEKIQSDCPYPGCFFCVMKEANPSKRRASVLKFFRELPSQDDDGQVLPISGLWNTAMAHP 60
Query: 337 NDPEFIELGVFECMEALIWKGIKNRQWLAKDQNIYIPYYAAHIIGSYTMNIEEFAERAVR 516 NDPEFI LG+FECM ALIWKG+KNR+WL+ DQNIYIPYYAAHIIGSYTMN+EEFAERAVR Sbjct: 61 NDPEFINLGIFECMSALIWKGLKNRRWLSHDQNIYIPYYAAHIIGSYTMNMEEFAERAVR 120
Query: 517 AGVIQPLVELLRGRLTWVEQRVAVRALGHLGTYDSTF 627 AGVI PLVELLRGRLTWVEQRVAVRALGHL TY STF Sbjct: 121 AGVIPPLVELLRGRLTWVEQRVAVRALGHLATYPSTF 157
>tr|A7R002|A7R002_VITVI Chromosome chr7 scaffold_294, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00010915001 PE=4 SV=1 Length = 627
Score = 284 bits (727), Expect = 3e-75 Identities = 131/157 (83%), Positives = 144/157 (91%) Frame = +1
Query: 157 MEKSALDCPYPGCFFCVMKEANPTKRRASVSKFFKEFPSQDEEGQVLAVSGLWNTAMAHP 336 M+K + DCPYPGCFFCVMKE NP+KRRAS+ KFF+E PSQD++GQVL +SGLWNTAMAHP Sbjct: 1 MDKVSPDCPYPGCFFCVMKEGNPSKRRASILKFFRELPSQDDDGQVLPISGLWNTAMAHP 60
Query: 337 NDPEFIELGVFECMEALIWKGIKNRQWLAKDQNIYIPYYAAHIIGSYTMNIEEFAERAVR 516 NDPEFIELG+FECM ALIWKG+KNR+WL+ DQNIYIPYYAAHIIGSYTMN+EEFAE AV Sbjct: 61 NDPEFIELGIFECMAALIWKGLKNRRWLSHDQNIYIPYYAAHIIGSYTMNMEEFAESAVH 120
Query: 517 AGVIQPLVELLRGRLTWVEQRVAVRALGHLGTYDSTF 627 AGVI PLVELLRGRLTWVEQRVAVRALGHL TY STF Sbjct: 121 AGVIPPLVELLRGRLTWVEQRVAVRALGHLATYASTF 157
>tr|A5C8E6|A5C8E6_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_023407 PE=4 SV=1 Length = 635
Score = 284 bits (727), Expect = 3e-75 Identities = 131/157 (83%), Positives = 144/157 (91%) Frame = +1
Query: 157 MEKSALDCPYPGCFFCVMKEANPTKRRASVSKFFKEFPSQDEEGQVLAVSGLWNTAMAHP 336 M+K + DCPYPGCFFCVMKE NP+KRRAS+ KFF+E PSQD++GQVL +SGLWNTAMAHP Sbjct: 1 MDKVSPDCPYPGCFFCVMKEGNPSKRRASILKFFRELPSQDDDGQVLPISGLWNTAMAHP 60
Query: 337 NDPEFIELGVFECMEALIWKGIKNRQWLAKDQNIYIPYYAAHIIGSYTMNIEEFAERAVR 516 NDPEFIELG+FECM ALIWKG+KNR+WL+ DQNIYIPYYAAHIIGSYTMN+EEFAE AV Sbjct: 61 NDPEFIELGIFECMAALIWKGLKNRRWLSHDQNIYIPYYAAHIIGSYTMNMEEFAESAVH 120
Query: 517 AGVIQPLVELLRGRLTWVEQRVAVRALGHLGTYDSTF 627 AGVI PLVELLRGRLTWVEQRVAVRALGHL TY STF Sbjct: 121 AGVIPPLVELLRGRLTWVEQRVAVRALGHLATYASTF 157
>tr|A9SVL4|A9SVL4_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_188847 PE=4 SV=1 Length = 643
Score = 281 bits (720), Expect = 2e-74 Identities = 131/157 (83%), Positives = 145/157 (92%) Frame = +1
Query: 157 MEKSALDCPYPGCFFCVMKEANPTKRRASVSKFFKEFPSQDEEGQVLAVSGLWNTAMAHP 336 MEK + DCPYPGCFFCVMKE N +KRR++V+KFFKE PSQ+E+GQVLA+SGLWNTAMAHP Sbjct: 1 MEKHSSDCPYPGCFFCVMKETNLSKRRSNVAKFFKELPSQNEDGQVLAISGLWNTAMAHP 60
Query: 337 NDPEFIELGVFECMEALIWKGIKNRQWLAKDQNIYIPYYAAHIIGSYTMNIEEFAERAVR 516 NDPEFIELG+FECM LIWKGI++R WLA+DQNIYIPYYAAHIIGSYTMN+EEFAE+AVR Sbjct: 61 NDPEFIELGIFECMARLIWKGIEDRNWLAQDQNIYIPYYAAHIIGSYTMNVEEFAEQAVR 120
Query: 517 AGVIQPLVELLRGRLTWVEQRVAVRALGHLGTYDSTF 627 AGVI LVELLR RLTWVEQRVAVRALGHL TYDSTF Sbjct: 121 AGVIPALVELLRDRLTWVEQRVAVRALGHLATYDSTF 157
>tr|Q9LX10|Q9LX10_ARATH Putative uncharacterized protein T31P16_190 OS=Arabidopsis thaliana GN=T31P16_190 PE=4 SV=1 Length = 621
Score = 280 bits (715), Expect = 7e-74 Identities = 127/154 (82%), Positives = 142/154 (92%) Frame = +1
Query: 166 SALDCPYPGCFFCVMKEANPTKRRASVSKFFKEFPSQDEEGQVLAVSGLWNTAMAHPNDP 345 S+ +CPYPGCFFCVMKE NP+KRR+ + KFF++ PSQD++GQVL +SGLWNTAMAHPNDP Sbjct: 5 SSQECPYPGCFFCVMKEGNPSKRRSCILKFFRDLPSQDDDGQVLPISGLWNTAMAHPNDP 64
Query: 346 EFIELGVFECMEALIWKGIKNRQWLAKDQNIYIPYYAAHIIGSYTMNIEEFAERAVRAGV 525 EFIELG+FECM ALIWKG+KNR+WL+ DQNIYIPYYAAHIIGSYTMN+EEFAERAV AGV Sbjct: 65 EFIELGIFECMSALIWKGLKNRRWLSHDQNIYIPYYAAHIIGSYTMNMEEFAERAVEAGV 124
Query: 526 IQPLVELLRGRLTWVEQRVAVRALGHLGTYDSTF 627 I PLVELLRGRLTWVEQRVAVRALGHL TY STF Sbjct: 125 IPPLVELLRGRLTWVEQRVAVRALGHLATYPSTF 158
>tr|Q0WMT6|Q0WMT6_ARATH Putative uncharacterized protein At5g10200 OS=Arabidopsis thaliana GN=At5g10200 PE=2 SV=1 Length = 631
Score = 280 bits (715), Expect = 7e-74 Identities = 127/154 (82%), Positives = 142/154 (92%) Frame = +1
Query: 166 SALDCPYPGCFFCVMKEANPTKRRASVSKFFKEFPSQDEEGQVLAVSGLWNTAMAHPNDP 345 S+ +CPYPGCFFCVMKE NP+KRR+ + KFF++ PSQD++GQVL +SGLWNTAMAHPNDP Sbjct: 5 SSQECPYPGCFFCVMKEGNPSKRRSCILKFFRDLPSQDDDGQVLPISGLWNTAMAHPNDP 64
Query: 346 EFIELGVFECMEALIWKGIKNRQWLAKDQNIYIPYYAAHIIGSYTMNIEEFAERAVRAGV 525 EFIELG+FECM ALIWKG+KNR+WL+ DQNIYIPYYAAHIIGSYTMN+EEFAERAV AGV Sbjct: 65 EFIELGIFECMSALIWKGLKNRRWLSHDQNIYIPYYAAHIIGSYTMNMEEFAERAVEAGV 124
Query: 526 IQPLVELLRGRLTWVEQRVAVRALGHLGTYDSTF 627 I PLVELLRGRLTWVEQRVAVRALGHL TY STF Sbjct: 125 IPPLVELLRGRLTWVEQRVAVRALGHLATYPSTF 158
>tr|Q4ABQ0|Q4ABQ0_BRARP 80A08_17 OS=Brassica rapa subsp. pekinensis GN=80A08_17 PE=4 SV=1 Length = 631
Score = 279 bits (714), Expect = 9e-74 Identities = 129/158 (81%), Positives = 144/158 (91%), Gaps = 1/158 (0%) Frame = +1
Query: 157 MEK-SALDCPYPGCFFCVMKEANPTKRRASVSKFFKEFPSQDEEGQVLAVSGLWNTAMAH 333 MEK S+ +CPYPGCFFCVMKE NP KRR+ + KFF++ PSQD++GQVL +SGLWNTAMAH Sbjct: 1 MEKASSQECPYPGCFFCVMKEGNPNKRRSCILKFFRDLPSQDDDGQVLPISGLWNTAMAH 60
Query: 334 PNDPEFIELGVFECMEALIWKGIKNRQWLAKDQNIYIPYYAAHIIGSYTMNIEEFAERAV 513 PNDPEFI+LG+FECM ALIWKG+KNR+WL+ DQNIYIPYYAAHIIGSYTMN+EEFAERAV Sbjct: 61 PNDPEFIDLGIFECMSALIWKGLKNRRWLSHDQNIYIPYYAAHIIGSYTMNMEEFAERAV 120
Query: 514 RAGVIQPLVELLRGRLTWVEQRVAVRALGHLGTYDSTF 627 AGVI PLVELLRGRLTWVEQRVAVRALGHL TY STF Sbjct: 121 EAGVIPPLVELLRGRLTWVEQRVAVRALGHLATYPSTF 158
>tr|B7U9S2|B7U9S2_CARAS AT5G10200-like protein OS=Cardaminopsis arenosa PE=4 SV=1 Length = 630
Score = 279 bits (714), Expect = 9e-74 Identities = 126/154 (81%), Positives = 142/154 (92%) Frame = +1
Query: 166 SALDCPYPGCFFCVMKEANPTKRRASVSKFFKEFPSQDEEGQVLAVSGLWNTAMAHPNDP 345 S+ +CPYPGCFFCVMKE NP+KRR+ + KFF++ PSQD++GQVL +SGLWNTAMAHPNDP Sbjct: 5 SSQECPYPGCFFCVMKEGNPSKRRSCILKFFRDLPSQDDDGQVLPISGLWNTAMAHPNDP 64
Query: 346 EFIELGVFECMEALIWKGIKNRQWLAKDQNIYIPYYAAHIIGSYTMNIEEFAERAVRAGV 525 EFIELG+FECM ALIWKG+KNR+WL+ DQNIYIPYYAAHIIGSYTMN+EEFAERAV AGV Sbjct: 65 EFIELGIFECMSALIWKGLKNRRWLSHDQNIYIPYYAAHIIGSYTMNMEEFAERAVEAGV 124
Query: 526 IQPLVELLRGRLTWVEQRVAVRALGHLGTYDSTF 627 + PLVELLRGRLTWVEQRVAVRALGHL TY STF Sbjct: 125 VAPLVELLRGRLTWVEQRVAVRALGHLATYPSTF 158
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