DK955057 |
Clone id |
TST39A01NGRL0022_B10 |
Library |
TST39 |
Length |
601 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0022_B10. 5' end sequence. |
Accession |
DK955057 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL804Contig1 |
Sequence |
AGCCCTTATTCAGGAATGTAATGGATCCAAGCCTGAATGTATTGCGACTCACGTTCCTGA GCCCGCCAAACACCAGAAAGGCACTGATATGCTAGAAAACGCAGATGAAGACATTGCACT TGCAGTTAGTAGTGGTGCTGTTGCTTCTTACTCACTGGAAGCAAGTATAGGGGATCCACA AAGAGCAGCTTCTATCAGGAAACGTGCAGTAGAGATTCTCACTGGAAGGTCTCTTCAGGG TCTTCCACTTGAAGGATTTGATTATTCAGCTGTTTTGGGACAATGCTGTGAAATGGTGAT TGGACATGTACAAATCCCCGTCGGGGTTGCAGGACCTCTGTCTCTGGATGGATTTGAGTA CATGGTGCCCATGGCAACAACTGAAGGCTGTCTTGTGGCGAGTACCAACCGAGGATGCAA GGCCATACATATGTCAGGTGGTGCAACAACTGTTTTGCTTAGGGATGGCATGACAAGGGC CCCAGTTGTGAAATTTGACTCTGCTCAACGAGCTGGGGAGTTGAAATTCTACATAGAGAA TGCTGAAAACTTTGAGATTCTTTGTTCCAAATTTAACAGGTCAAGCAGGTTTGCACGCTT G |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
O64967 |
Definition |
sp|O64967|HMDH2_GOSHI 3-hydroxy-3-methylglutaryl-coenzyme A reductase 2 OS=Gossypium hirsutum |
Align length |
177 |
Score (bit) |
245.0 |
E-value |
1.0e-64 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q6WP38 |
Definition |
tr|Q6WP38|Q6WP38_9CONI 3-hydroxy-3-methylglutaryl coenzyme A reductase OS=Taxus x media |
Align length |
183 |
Score (bit) |
259.0 |
E-value |
8.0e-68 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK955057|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0022_B10, 5' (601 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q6WP38|Q6WP38_9CONI 3-hydroxy-3-methylglutaryl coenzyme A red... 259 8e-68 tr|A9SYW2|A9SYW2_PHYPA Predicted protein OS=Physcomitrella paten... 259 8e-68 tr|Q5XQC9|Q5XQC9_GINBI 3-hydroxy-3-methylglutaryl coenzyme A red... 258 2e-67 tr|A9RAZ3|A9RAZ3_PHYPA Predicted protein OS=Physcomitrella paten... 252 1e-65 tr|A9SAN5|A9SAN5_PHYPA Predicted protein OS=Physcomitrella paten... 246 6e-64 tr|A9YVC2|A9YVC2_MEDTR 3-hydroxy-3-methylglutaryl coenzyme A red... 246 1e-63 tr|A7QPH4|A7QPH4_VITVI Chromosome chr18 scaffold_137, whole geno... 246 1e-63 tr|Q9ZWF9|Q9ZWF9_CUCME HMG-CoA reductase OS=Cucumis melo GN=Cm-H... 245 1e-63 tr|Q43826|Q43826_RAPSA Hydroxymethylglutaryl-CoA reductase (NADP... 245 1e-63 tr|Q6RW12|Q6RW12_ARATH 3-hydroxy-3-methylglutaryl coenzyme A red... 245 2e-63 tr|Q1HB06|Q1HB06_LITCN 3-hydroxy-3-methylglutaryl-coenzyme A red... 244 4e-63 tr|A9Q0N6|A9Q0N6_CORAV 3-hydroxy-3-methylglutaryl coenzyme A red... 244 4e-63 tr|Q9ZRH3|Q9ZRH3_MORAL 3-hydroxy-3-methylglutaryl-coenzyme A red... 242 1e-62 tr|A9ZMZ9|A9ZMZ9_HEVBR Hydroxymethylglutaryl-CoA reductase OS=He... 242 1e-62 tr|A9YVC5|A9YVC5_MEDTR 3-hydroxy-3-methylglutaryl coenzyme A red... 242 1e-62 tr|Q6GX36|Q6GX36_CATRO Hydroxymethylglutaryl-CoA reductase OS=Ca... 241 2e-62 tr|A9YVC4|A9YVC4_MEDTR 3-hydroxy-3-methylglutaryl coenzyme A red... 241 2e-62 tr|A9YVC1|A9YVC1_MEDTR 3-hydroxy-3-methylglutaryl coenzyme A red... 241 3e-62 tr|Q84MM0|Q84MM0_ANDPA 3-hydroxy-3-methylglutaryl-coenzyme A red... 239 7e-62 tr|A9YVC3|A9YVC3_MEDTR 3-hydroxy-3-methylglutaryl coenzyme A red... 239 7e-62 tr|A0N0D3|A0N0D3_9ROSI 3-hydroxy-3-methylglutaryl-CoA reductase ... 239 7e-62 tr|Q43825|Q43825_RAPSA Hydroxymethylglutaryl-CoA reductase (NADP... 239 9e-62 tr|Q8GTA8|Q8GTA8_TOBAC Hydroxy-methyl-glutaryl-coenzyme A reduct... 239 1e-61 tr|Q4PLI3|Q4PLI3_9ROSI 3-hydroxy-methylglutaryl coenzyme A reduc... 239 1e-61 tr|A9ZMZ8|A9ZMZ8_HEVBR Hydroxymethylglutaryl-CoA reductase OS=He... 239 1e-61 tr|Q8GTA7|Q8GTA7_TOBAC Hydroxy-methyl-glutaryl-coenzyme A reduct... 238 2e-61 tr|Q5RZ62|Q5RZ62_EUCUL 3-hydroxy-3-methylglutaryl coenzyme A red... 238 2e-61 tr|Q8W2E3|Q8W2E3_PEA 3-hydroxy-3-methylglutaryl coenzyme A OS=Pi... 238 3e-61 tr|Q84UU2|Q84UU2_9SOLA 3-hydroxy-3-methylglutaryl-CoA reductase ... 237 4e-61 tr|P93080|P93080_CAMAC 3-hydroxy-3-methylglutaryl coenzyme a red... 236 6e-61
>tr|Q6WP38|Q6WP38_9CONI 3-hydroxy-3-methylglutaryl coenzyme A reductase OS=Taxus x media GN=hmgr PE=2 SV=1 Length = 595
Score = 259 bits (662), Expect = 8e-68 Identities = 128/183 (69%), Positives = 152/183 (83%) Frame = +2
Query: 53 VPEPAKHQKGTDMLENADEDIALAVSSGAVASYSLEASIGDPQRAASIRKRAVEILTGRS 232 V +P KGT + EN DEDIA AV G VASYSLE+S+GD +RAA +R+ A+E++TGRS Sbjct: 158 VKKPEAQLKGTVLGENEDEDIAAAVCDGTVASYSLESSLGDCKRAAFVRRSALELMTGRS 217
Query: 233 LQGLPLEGFDYSAVLGQCCEMVIGHVQIPVGVAGPLSLDGFEYMVPMATTEGCLVASTNR 412 L GLPLEGFDY ++LGQCCEM IG+VQIPVGVAGPL L+GFEYMVP+ATTEGCLVASTN Sbjct: 218 LDGLPLEGFDYQSILGQCCEMPIGYVQIPVGVAGPLLLNGFEYMVPVATTEGCLVASTNS 277
Query: 413 GCKAIHMSGGATTVLLRDGMTRAPVVKFDSAQRAGELKFYIENAENFEILCSKFNRSSRF 592 GCKAIHM GGAT++LLRDGMTRAPVV+F SA+RA +LK+YIE+ N E L FNR++RF Sbjct: 278 GCKAIHMCGGATSILLRDGMTRAPVVRFQSAKRAADLKYYIEDPTNAENLSHIFNRTTRF 337
Query: 593 ARL 601 RL Sbjct: 338 GRL 340
>tr|A9SYW2|A9SYW2_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_189945 PE=3 SV=1 Length = 579
Score = 259 bits (662), Expect = 8e-68 Identities = 124/192 (64%), Positives = 155/192 (80%), Gaps = 1/192 (0%) Frame = +2
Query: 29 KPEC-IATHVPEPAKHQKGTDMLENADEDIALAVSSGAVASYSLEASIGDPQRAASIRKR 205 +P C +A+ P+ G + EN DEDIA AVS+G V SYSLE+ IGDP RAA+IR+R Sbjct: 128 RPNCQVASEAPKAVVQLMGVSLSENEDEDIARAVSNGDVPSYSLESQIGDPLRAAAIRRR 187
Query: 206 AVEILTGRSLQGLPLEGFDYSAVLGQCCEMVIGHVQIPVGVAGPLSLDGFEYMVPMATTE 385 +VE+ TGRSL+GLPL G DYS++LGQCCEMV+G+VQ+PVGVAGPL ++G E+ VPMATTE Sbjct: 188 SVEMTTGRSLEGLPLSGLDYSSILGQCCEMVVGYVQVPVGVAGPLLINGREFTVPMATTE 247
Query: 386 GCLVASTNRGCKAIHMSGGATTVLLRDGMTRAPVVKFDSAQRAGELKFYIENAENFEILC 565 GCLVASTNRGCKAIH SGGAT++LL+DGMTRAPVV+F S +R ELKF++E+ NF+ + Sbjct: 248 GCLVASTNRGCKAIHQSGGATSILLQDGMTRAPVVRFPSVKRCAELKFFLEDPNNFDTIA 307
Query: 566 SKFNRSSRFARL 601 FNR+SRF RL Sbjct: 308 HMFNRTSRFGRL 319
>tr|Q5XQC9|Q5XQC9_GINBI 3-hydroxy-3-methylglutaryl coenzyme A reductase OS=Ginkgo biloba PE=2 SV=1 Length = 571
Score = 258 bits (659), Expect = 2e-67 Identities = 126/175 (72%), Positives = 151/175 (86%) Frame = +2
Query: 77 KGTDMLENADEDIALAVSSGAVASYSLEASIGDPQRAASIRKRAVEILTGRSLQGLPLEG 256 KG + EN+DEDIA AV +G+VASYSLE+S+GD +RAAS+R+RA+E++TG L GLPLEG Sbjct: 149 KGVAVGENSDEDIAAAVCNGSVASYSLESSLGDCRRAASVRRRALELMTGICLDGLPLEG 208
Query: 257 FDYSAVLGQCCEMVIGHVQIPVGVAGPLSLDGFEYMVPMATTEGCLVASTNRGCKAIHMS 436 FDY ++LGQCCEM +G VQIPVGVAGPL L+G EYMVPMATTEGCLVASTNRGCKAIHMS Sbjct: 209 FDYDSILGQCCEMPVGVVQIPVGVAGPLLLNGLEYMVPMATTEGCLVASTNRGCKAIHMS 268
Query: 437 GGATTVLLRDGMTRAPVVKFDSAQRAGELKFYIENAENFEILCSKFNRSSRFARL 601 GGAT++LLRDGMTRAP+V+F SA+RA +LKFY+E+ N E L FNR+SRF RL Sbjct: 269 GGATSILLRDGMTRAPLVRFASAKRAADLKFYLEHPNNAEALSHLFNRTSRFGRL 323
>tr|A9RAZ3|A9RAZ3_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_173789 PE=3 SV=1 Length = 578
Score = 252 bits (644), Expect = 1e-65 Identities = 125/195 (64%), Positives = 154/195 (78%), Gaps = 6/195 (3%) Frame = +2
Query: 35 ECIATH---VPEPAK---HQKGTDMLENADEDIALAVSSGAVASYSLEASIGDPQRAASI 196 EC+ + VPE K G + +N DEDIA AVS+G V SYSLE +GD RAASI Sbjct: 122 ECVKSSCQVVPEAPKAPVQLMGVGLCDNEDEDIARAVSNGDVPSYSLETQLGDTLRAASI 181
Query: 197 RKRAVEILTGRSLQGLPLEGFDYSAVLGQCCEMVIGHVQIPVGVAGPLSLDGFEYMVPMA 376 R+RAVE+ TGRSL+GLPL G DYS+++GQCCEMV+G+VQ+PVGVAGPL L+G E+ VPMA Sbjct: 182 RRRAVELTTGRSLEGLPLTGLDYSSIMGQCCEMVVGYVQLPVGVAGPLLLNGHEFTVPMA 241
Query: 377 TTEGCLVASTNRGCKAIHMSGGATTVLLRDGMTRAPVVKFDSAQRAGELKFYIENAENFE 556 TTEGCLVASTNRGCKAIH SGGAT++LL+DGMTRAPVV+F S +R +LKF++E+ NF+ Sbjct: 242 TTEGCLVASTNRGCKAIHQSGGATSILLQDGMTRAPVVRFPSVKRCADLKFFLEDPNNFD 301
Query: 557 ILCSKFNRSSRFARL 601 + FNR+SRFARL Sbjct: 302 TIAHMFNRTSRFARL 316
>tr|A9SAN5|A9SAN5_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_76806 PE=3 SV=1 Length = 561
Score = 246 bits (629), Expect = 6e-64 Identities = 120/192 (62%), Positives = 151/192 (78%), Gaps = 1/192 (0%) Frame = +2
Query: 29 KPEC-IATHVPEPAKHQKGTDMLENADEDIALAVSSGAVASYSLEASIGDPQRAASIRKR 205 +P C + P+P G + +N DE+IA AVS+G V SYSLE +GD RAA+IR+R Sbjct: 108 RPSCQMQPEAPKPPVQLMGMGLSDNEDEEIARAVSNGDVPSYSLETQLGDTLRAAAIRRR 167
Query: 206 AVEILTGRSLQGLPLEGFDYSAVLGQCCEMVIGHVQIPVGVAGPLSLDGFEYMVPMATTE 385 AVE+ TGRSL+GLPL G DYS+++GQCCEMV+G+VQIP+GVAGPL L+G E+ VPMATTE Sbjct: 168 AVELNTGRSLEGLPLTGLDYSSIIGQCCEMVVGYVQIPLGVAGPLLLNGVEFTVPMATTE 227
Query: 386 GCLVASTNRGCKAIHMSGGATTVLLRDGMTRAPVVKFDSAQRAGELKFYIENAENFEILC 565 GCLVASTNRGCKAI+ SGGAT+ LL DGMTRAPVV+F S +R +LKF++E+ NF+ + Sbjct: 228 GCLVASTNRGCKAIYQSGGATSKLLEDGMTRAPVVRFPSVKRCADLKFFLEDPNNFDTIS 287
Query: 566 SKFNRSSRFARL 601 FNR+SRFARL Sbjct: 288 HMFNRTSRFARL 299
>tr|A9YVC2|A9YVC2_MEDTR 3-hydroxy-3-methylglutaryl coenzyme A reductase 2 OS=Medicago truncatula PE=2 SV=1 Length = 542
Score = 246 bits (627), Expect = 1e-63 Identities = 124/193 (64%), Positives = 154/193 (79%) Frame = +2
Query: 23 GSKPECIATHVPEPAKHQKGTDMLENADEDIALAVSSGAVASYSLEASIGDPQRAASIRK 202 G P+ + T P QK M DE++ AV SG++ SYSLE+ +GD +RAA+IR Sbjct: 104 GVLPKKLPTLPPPKISDQKVMSM---EDEEVVSAVVSGSIPSYSLESKLGDCRRAANIRN 160
Query: 203 RAVEILTGRSLQGLPLEGFDYSAVLGQCCEMVIGHVQIPVGVAGPLSLDGFEYMVPMATT 382 +AVE +TGRSL+GLP+EGFDY ++LGQCCEM IG VQIPVGVAGPL LDG EY VPMATT Sbjct: 161 QAVERVTGRSLEGLPMEGFDYDSILGQCCEMPIGFVQIPVGVAGPLLLDGNEYTVPMATT 220
Query: 383 EGCLVASTNRGCKAIHMSGGATTVLLRDGMTRAPVVKFDSAQRAGELKFYIENAENFEIL 562 EGCLVASTNRGCKAI++SGGA+ V+LRDGMTRAPVV+F+SA+RA +LKF++E+ +NF+ L Sbjct: 221 EGCLVASTNRGCKAIYVSGGASAVVLRDGMTRAPVVRFNSAKRASQLKFFLEDPQNFDSL 280
Query: 563 CSKFNRSSRFARL 601 FN+SSRFARL Sbjct: 281 SHTFNKSSRFARL 293
>tr|A7QPH4|A7QPH4_VITVI Chromosome chr18 scaffold_137, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00002942001 PE=3 SV=1 Length = 550
Score = 246 bits (627), Expect = 1e-63 Identities = 120/166 (72%), Positives = 142/166 (85%) Frame = +2
Query: 104 DEDIALAVSSGAVASYSLEASIGDPQRAASIRKRAVEILTGRSLQGLPLEGFDYSAVLGQ 283 DEDI V SG + SYSLE+ +GD +RAASIR+ A++ LTG+SL LP EGFDY A+LGQ Sbjct: 136 DEDIVKLVVSGTIPSYSLESKLGDCKRAASIRREALQRLTGKSLLELPFEGFDYQAILGQ 195
Query: 284 CCEMVIGHVQIPVGVAGPLSLDGFEYMVPMATTEGCLVASTNRGCKAIHMSGGATTVLLR 463 CCEM +G+VQIPVG+AGPL LDGFEY VPMATTEGCLVASTNRGCKAI++SGGAT+++LR Sbjct: 196 CCEMPVGYVQIPVGIAGPLLLDGFEYSVPMATTEGCLVASTNRGCKAIYVSGGATSMVLR 255
Query: 464 DGMTRAPVVKFDSAQRAGELKFYIENAENFEILCSKFNRSSRFARL 601 DGMTRAPVV+F +A+RA ELKF++EN ENFE L FNRSSRFARL Sbjct: 256 DGMTRAPVVRFATAKRAAELKFFLENPENFETLSVIFNRSSRFARL 301
>tr|Q9ZWF9|Q9ZWF9_CUCME HMG-CoA reductase OS=Cucumis melo GN=Cm-HMGR PE=2 SV=1 Length = 587
Score = 245 bits (626), Expect = 1e-63 Identities = 117/170 (68%), Positives = 142/170 (83%) Frame = +2
Query: 92 LENADEDIALAVSSGAVASYSLEASIGDPQRAASIRKRAVEILTGRSLQGLPLEGFDYSA 271 L DE++ V G+V SYSLE+ +GDP+RAASIR+ A++ TGRS+ GLP EGFDY + Sbjct: 169 LPEEDEEVVKMVVDGSVPSYSLESKLGDPKRAASIRREALQRTTGRSIHGLPFEGFDYES 228
Query: 272 VLGQCCEMVIGHVQIPVGVAGPLSLDGFEYMVPMATTEGCLVASTNRGCKAIHMSGGATT 451 +LGQCCEM +G+VQIPVG+AGPL LDGFEY VPMATTEGCLVASTNRGCKAI+ SGGAT+ Sbjct: 229 ILGQCCEMPVGYVQIPVGIAGPLLLDGFEYTVPMATTEGCLVASTNRGCKAIYASGGATS 288
Query: 452 VLLRDGMTRAPVVKFDSAQRAGELKFYIENAENFEILCSKFNRSSRFARL 601 +LL+DGMTRAPVV+F SA+RA ELKF++E+ NF+ L FNRSSRFARL Sbjct: 289 MLLKDGMTRAPVVRFGSAKRASELKFFLEDPSNFDTLAVVFNRSSRFARL 338
>tr|Q43826|Q43826_RAPSA Hydroxymethylglutaryl-CoA reductase (NADPH) OS=Raphanus sativus GN=HMG2 PE=2 SV=1 Length = 573
Score = 245 bits (626), Expect = 1e-63 Identities = 119/189 (62%), Positives = 152/189 (80%) Frame = +2
Query: 35 ECIATHVPEPAKHQKGTDMLENADEDIALAVSSGAVASYSLEASIGDPQRAASIRKRAVE 214 + +A +P P + L DE+I +V G V SYSLE+ +GD +RAASIR+ A++ Sbjct: 139 QIVAAKLPNPEQPP-----LPKEDEEIVKSVLDGVVPSYSLESRLGDCKRAASIRREALQ 193
Query: 215 ILTGRSLQGLPLEGFDYSAVLGQCCEMVIGHVQIPVGVAGPLSLDGFEYMVPMATTEGCL 394 LTGRS++GLPL+GFDY ++LGQCCEM +G++QIPVG+AGPL LDG+EY VPMATTEGCL Sbjct: 194 RLTGRSIEGLPLDGFDYDSILGQCCEMPVGYIQIPVGIAGPLLLDGYEYSVPMATTEGCL 253
Query: 395 VASTNRGCKAIHMSGGATTVLLRDGMTRAPVVKFDSAQRAGELKFYIENAENFEILCSKF 574 VASTNRGCKA+++SGGAT+ +L+DGMTRAPVV+F SA+RA ELKF++E+ ENFE L F Sbjct: 254 VASTNRGCKAMYVSGGATSTVLKDGMTRAPVVRFASARRASELKFFLESPENFETLAVVF 313
Query: 575 NRSSRFARL 601 NRSSRFARL Sbjct: 314 NRSSRFARL 322
>tr|Q6RW12|Q6RW12_ARATH 3-hydroxy-3-methylglutaryl coenzyme A reductase isoform 1L OS=Arabidopsis thaliana GN=HMG1 PE=2 SV=1 Length = 642
Score = 245 bits (625), Expect = 2e-63 Identities = 118/182 (64%), Positives = 149/182 (81%) Frame = +2
Query: 56 PEPAKHQKGTDMLENADEDIALAVSSGAVASYSLEASIGDPQRAASIRKRAVEILTGRSL 235 PEP T+ L DE+I +V G + SYSLE+ +GD +RAASIR+ A++ +TGRS+ Sbjct: 210 PEPIV----TESLPEEDEEIVKSVIDGVIPSYSLESRLGDCKRAASIRREALQRVTGRSI 265
Query: 236 QGLPLEGFDYSAVLGQCCEMVIGHVQIPVGVAGPLSLDGFEYMVPMATTEGCLVASTNRG 415 +GLPL+GFDY ++LGQCCEM +G++QIPVG+AGPL LDG+EY VPMATTEGCLVASTNRG Sbjct: 266 EGLPLDGFDYESILGQCCEMPVGYIQIPVGIAGPLLLDGYEYSVPMATTEGCLVASTNRG 325
Query: 416 CKAIHMSGGATTVLLRDGMTRAPVVKFDSAQRAGELKFYIENAENFEILCSKFNRSSRFA 595 CKA+ +SGGAT+ +L+DGMTRAPVV+F SA+RA ELKF++EN ENF+ L FNRSSRFA Sbjct: 326 CKAMFISGGATSTVLKDGMTRAPVVRFASARRASELKFFLENPENFDTLAVVFNRSSRFA 385
Query: 596 RL 601 RL Sbjct: 386 RL 387
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