DK955074 |
Clone id |
TST39A01NGRL0022_C03 |
Library |
TST39 |
Length |
610 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0022_C03. 5' end sequence. |
Accession |
DK955074 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL275Contig1 |
Sequence |
CCTTTTTGAGTAGGGATCTGCTCCTCGTCACTCTCTTTTGCCTCCTGTGCTGAAGCTCGC GTTCGTCCAACCATGGCCGGCTCCGAAGGCTACGATGCGCGCGCTTATGACGCCAAAATG GAACAAGTTCTCACAGGTGAGGGTGACGAGATAAGCTCTACTTGGAACGAGGTTTGTGAG ACCTTTGATGAGATGGGTCTCCACGAGAACCTTTTGAGAGGCATTTATGCATATGGTTTT GAAAAACCTTCTGCGATTCAGCAAAGGGGAATTGTCCCCTTCGCTAAGGGTTTAGATGTT ATTCAGCAGGCACAATCTGGCACTGGCAAGACTGCCACCTTTTGCTCTGGAATACTTCAG CAGCTAGATTATAACCTGTTTGATTGCCAGGCACTTGTCTTGGCACCTACCCGAGAATTG GCTCAGCAGATAGAGAAGGTGATGCGTGCGCTTGGTGATTATTTGCAAGTGAAGGTACAT GCTTGTGTTGGTGGTACAAGTGTAAGAGAAGATATTCGAATTCTTCAGAGTGGAGTCCAT GTTGTGGTTGGCACTCCTGGTCGAGTTTATGATATGTTACGTCGTGGTTCAATGCGACCA GAATACATCA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q40471 |
Definition |
sp|Q40471|IF4A9_TOBAC Eukaryotic initiation factor 4A-9 OS=Nicotiana tabacum |
Align length |
180 |
Score (bit) |
285.0 |
E-value |
1.0e-76 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9TZ99 |
Definition |
tr|A9TZ99|A9TZ99_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
183 |
Score (bit) |
305.0 |
E-value |
1.0e-81 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK955074|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0022_C03, 5' (610 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9TZ99|A9TZ99_PHYPA Predicted protein OS=Physcomitrella paten... 305 1e-81 tr|B8LRR8|B8LRR8_PICSI Putative uncharacterized protein OS=Picea... 302 1e-80 tr|A9U6C4|A9U6C4_PHYPA Predicted protein (Fragment) OS=Physcomit... 302 1e-80 tr|A9SGN5|A9SGN5_PHYPA Predicted protein OS=Physcomitrella paten... 302 1e-80 tr|A9SY53|A9SY53_PHYPA Predicted protein OS=Physcomitrella paten... 300 3e-80 tr|A9RVE1|A9RVE1_PHYPA Predicted protein OS=Physcomitrella paten... 295 1e-78 tr|A9PD17|A9PD17_POPTR Putative uncharacterized protein OS=Popul... 285 1e-75 tr|A9PA53|A9PA53_POPTR Putative uncharacterized protein OS=Popul... 285 2e-75 tr|A7P4J8|A7P4J8_VITVI Chromosome chr4 scaffold_6, whole genome ... 284 2e-75 tr|Q4U474|Q4U474_PENAM Eukaryotic initiation factor 4A OS=Pennis... 284 3e-75 tr|A9P851|A9P851_POPTR Putative uncharacterized protein OS=Popul... 284 3e-75 tr|A7PE49|A7PE49_VITVI Chromosome chr11 scaffold_13, whole genom... 284 3e-75 tr|A7P6N2|A7P6N2_VITVI Chromosome chr9 scaffold_7, whole genome ... 284 3e-75 tr|A5BI23|A5BI23_VITVI Putative uncharacterized protein OS=Vitis... 284 3e-75 tr|A9PA36|A9PA36_POPTR Putative uncharacterized protein OS=Popul... 283 4e-75 tr|A5BNE8|A5BNE8_VITVI Putative uncharacterized protein OS=Vitis... 283 6e-75 tr|O24449|O24449_MAIZE Translational initiation factor eIF-4A OS... 282 9e-75 tr|Q8H1A5|Q8H1A5_PEA DEAD box RNA helicase OS=Pisum sativum PE=2... 281 2e-74 tr|B7EPR0|B7EPR0_ORYSJ cDNA clone:001-114-H08, full insert seque... 281 2e-74 tr|A2YGP5|A2YGP5_ORYSI Putative uncharacterized protein OS=Oryza... 281 2e-74 tr|Q8H1A4|Q8H1A4_PEA DEAD box RNA helicase OS=Pisum sativum PE=2... 281 3e-74 tr|O24558|O24558_MAIZE Translation initiation factor OS=Zea mays... 280 5e-74 tr|B7EMF9|B7EMF9_ORYSJ cDNA clone:J033048E24, full insert sequen... 280 5e-74 tr|A3A343|A3A343_ORYSJ Putative uncharacterized protein OS=Oryza... 280 5e-74 tr|A2X0V4|A2X0V4_ORYSI Putative uncharacterized protein OS=Oryza... 280 5e-74 tr|B1P765|B1P765_LOLTE Eukaryotic initiation factor 4A (Fragment... 280 6e-74 tr|A2Q689|A2Q689_MEDTR Helicase, C-terminal OS=Medicago truncatu... 280 6e-74 tr|B4FBK3|B4FBK3_MAIZE Eukaryotic initiation factor 4A OS=Zea ma... 277 3e-73 tr|Q6T8C6|Q6T8C6_HELAN Initiation factor eIF4A-15 OS=Helianthus ... 276 5e-73 tr|A7KMF2|A7KMF2_LOLPR Eukaryotic initiation factor 4A (Fragment... 276 9e-73
>tr|A9TZ99|A9TZ99_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_226898 PE=3 SV=1 Length = 413
Score = 305 bits (781), Expect = 1e-81 Identities = 156/183 (85%), Positives = 165/183 (90%), Gaps = 4/183 (2%) Frame = +1
Query: 73 MAGS--EG--YDARAYDAKMEQVLTGEGDEISSTWNEVCETFDEMGLHENLLRGIYAYGF 240 MAGS EG +DAR YDAKME +L+GEGD+ STW EV ETFD MGLHENLLRGIYAYGF Sbjct: 1 MAGSAPEGSQFDARQYDAKMENILSGEGDDFISTWEEVHETFDVMGLHENLLRGIYAYGF 60
Query: 241 EKPSAIQQRGIVPFAKGLDVIQQAQSGTGKTATFCSGILQQLDYNLFDCQALVLAPTREL 420 EKPSAIQQRGIVPF KGLDVIQQAQSGTGKTATFCSGILQQLDY L +CQALVLAPTREL Sbjct: 61 EKPSAIQQRGIVPFTKGLDVIQQAQSGTGKTATFCSGILQQLDYQLLECQALVLAPTREL 120
Query: 421 AQQIEKVMRALGDYLQVKVHACVGGTSVREDIRILQSGVHVVVGTPGRVYDMLRRGSMRP 600 AQQIEKVMRALGDYLQVKVHACVGGTSVRED RILQ+GVHVVVGTPGRVYDMLRR ++R Sbjct: 121 AQQIEKVMRALGDYLQVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVYDMLRRNALRA 180
Query: 601 EYI 609 + I Sbjct: 181 DSI 183
>tr|B8LRR8|B8LRR8_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 413
Score = 302 bits (773), Expect = 1e-80 Identities = 148/173 (85%), Positives = 163/173 (94%) Frame = +1
Query: 91 YDARAYDAKMEQVLTGEGDEISSTWNEVCETFDEMGLHENLLRGIYAYGFEKPSAIQQRG 270 +DAR YDAKM+++L+ EGDE+ ++++EV E+FDEMGLHENLLRGIYAYGFEKPSAIQQRG Sbjct: 11 FDARQYDAKMKEILSTEGDELFASYDEVHESFDEMGLHENLLRGIYAYGFEKPSAIQQRG 70
Query: 271 IVPFAKGLDVIQQAQSGTGKTATFCSGILQQLDYNLFDCQALVLAPTRELAQQIEKVMRA 450 IVPF KGLDVIQQAQSGTGKTATFCSGILQQLDY L DCQALVLAPTRELAQQIEKVMRA Sbjct: 71 IVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLLDCQALVLAPTRELAQQIEKVMRA 130
Query: 451 LGDYLQVKVHACVGGTSVREDIRILQSGVHVVVGTPGRVYDMLRRGSMRPEYI 609 LGDYLQVKVHACVGGTSVR+D RIL SGVHVVVGTPGRV+DMLRR S+RP+YI Sbjct: 131 LGDYLQVKVHACVGGTSVRDDQRILMSGVHVVVGTPGRVFDMLRRHSLRPDYI 183
>tr|A9U6C4|A9U6C4_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_228441 PE=4 SV=1 Length = 203
Score = 302 bits (773), Expect = 1e-80 Identities = 155/183 (84%), Positives = 164/183 (89%), Gaps = 4/183 (2%) Frame = +1
Query: 73 MAGS--EG--YDARAYDAKMEQVLTGEGDEISSTWNEVCETFDEMGLHENLLRGIYAYGF 240 MAGS EG +DAR YDAKME +L GEG++ STW EV ETFD MGLHENLLRGIYAYGF Sbjct: 1 MAGSAPEGSQFDARQYDAKMETILGGEGEDFISTWEEVHETFDVMGLHENLLRGIYAYGF 60
Query: 241 EKPSAIQQRGIVPFAKGLDVIQQAQSGTGKTATFCSGILQQLDYNLFDCQALVLAPTREL 420 EKPSAIQQRGIVPF KGLDVIQQAQSGTGKTATFCSGILQQLDY L +CQALVLAPTREL Sbjct: 61 EKPSAIQQRGIVPFTKGLDVIQQAQSGTGKTATFCSGILQQLDYQLLECQALVLAPTREL 120
Query: 421 AQQIEKVMRALGDYLQVKVHACVGGTSVREDIRILQSGVHVVVGTPGRVYDMLRRGSMRP 600 AQQIEKVMRALGDYLQVKVHACVGGTSVRED RILQ+GVHVVVGTPGRVYDMLRR ++R Sbjct: 121 AQQIEKVMRALGDYLQVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVYDMLRRNALRA 180
Query: 601 EYI 609 + I Sbjct: 181 DSI 183
>tr|A9SGN5|A9SGN5_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_233331 PE=3 SV=1 Length = 413
Score = 302 bits (773), Expect = 1e-80 Identities = 155/183 (84%), Positives = 164/183 (89%), Gaps = 4/183 (2%) Frame = +1
Query: 73 MAGS--EG--YDARAYDAKMEQVLTGEGDEISSTWNEVCETFDEMGLHENLLRGIYAYGF 240 MAGS EG +DAR YDAKME +L GEG++ STW EV ETFD MGLHENLLRGIYAYGF Sbjct: 1 MAGSAPEGSQFDARQYDAKMETILGGEGEDFISTWEEVHETFDVMGLHENLLRGIYAYGF 60
Query: 241 EKPSAIQQRGIVPFAKGLDVIQQAQSGTGKTATFCSGILQQLDYNLFDCQALVLAPTREL 420 EKPSAIQQRGIVPF KGLDVIQQAQSGTGKTATFCSGILQQLDY L +CQALVLAPTREL Sbjct: 61 EKPSAIQQRGIVPFTKGLDVIQQAQSGTGKTATFCSGILQQLDYQLLECQALVLAPTREL 120
Query: 421 AQQIEKVMRALGDYLQVKVHACVGGTSVREDIRILQSGVHVVVGTPGRVYDMLRRGSMRP 600 AQQIEKVMRALGDYLQVKVHACVGGTSVRED RILQ+GVHVVVGTPGRVYDMLRR ++R Sbjct: 121 AQQIEKVMRALGDYLQVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVYDMLRRNALRA 180
Query: 601 EYI 609 + I Sbjct: 181 DSI 183
>tr|A9SY53|A9SY53_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_107162 PE=3 SV=1 Length = 413
Score = 300 bits (769), Expect = 3e-80 Identities = 155/183 (84%), Positives = 163/183 (89%), Gaps = 4/183 (2%) Frame = +1
Query: 73 MAGS--EG--YDARAYDAKMEQVLTGEGDEISSTWNEVCETFDEMGLHENLLRGIYAYGF 240 MAGS EG +DAR YDAKME VL GEG++ STW EV ETFD M LHENLLRGIYAYGF Sbjct: 1 MAGSAPEGSQFDARQYDAKMETVLAGEGEDFISTWEEVHETFDVMDLHENLLRGIYAYGF 60
Query: 241 EKPSAIQQRGIVPFAKGLDVIQQAQSGTGKTATFCSGILQQLDYNLFDCQALVLAPTREL 420 EKPSAIQQRGIVPF KGLDVIQQAQSGTGKTATFCSGILQQLDY L +CQALVLAPTREL Sbjct: 61 EKPSAIQQRGIVPFTKGLDVIQQAQSGTGKTATFCSGILQQLDYQLLECQALVLAPTREL 120
Query: 421 AQQIEKVMRALGDYLQVKVHACVGGTSVREDIRILQSGVHVVVGTPGRVYDMLRRGSMRP 600 AQQIEKVMRALGDYLQVKVHACVGGTSVRED RILQ+GVHVVVGTPGRVYDMLRR ++R Sbjct: 121 AQQIEKVMRALGDYLQVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVYDMLRRNALRA 180
Query: 601 EYI 609 + I Sbjct: 181 DAI 183
>tr|A9RVE1|A9RVE1_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_119989 PE=3 SV=1 Length = 414
Score = 295 bits (756), Expect = 1e-78 Identities = 153/184 (83%), Positives = 164/184 (89%), Gaps = 5/184 (2%) Frame = +1
Query: 73 MAGS--EG--YDARAYDAKMEQVLTGEGDEISSTWNEVCETFDEMGLHENLLRGIYAYG- 237 MAGS EG +DAR YDAKME +L+ EG++ STW EV +TFD MGLHENLLRGIYAYG Sbjct: 1 MAGSAPEGSQFDARQYDAKMENILSAEGEDFISTWEEVHDTFDVMGLHENLLRGIYAYGS 60
Query: 238 FEKPSAIQQRGIVPFAKGLDVIQQAQSGTGKTATFCSGILQQLDYNLFDCQALVLAPTRE 417 FEKPSAIQQRGIVPF KGLDVIQQAQSGTGKTATFCSGILQQLDY L +CQALVLAPTRE Sbjct: 61 FEKPSAIQQRGIVPFTKGLDVIQQAQSGTGKTATFCSGILQQLDYQLLECQALVLAPTRE 120
Query: 418 LAQQIEKVMRALGDYLQVKVHACVGGTSVREDIRILQSGVHVVVGTPGRVYDMLRRGSMR 597 LAQQIEKVMRALGDYLQVKVHACVGGTSVRED RILQ+GVHVVVGTPGRVYDMLRR ++R Sbjct: 121 LAQQIEKVMRALGDYLQVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVYDMLRRNALR 180
Query: 598 PEYI 609 + I Sbjct: 181 ADSI 184
>tr|A9PD17|A9PD17_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 413
Score = 285 bits (729), Expect = 1e-75 Identities = 140/173 (80%), Positives = 155/173 (89%) Frame = +1
Query: 91 YDARAYDAKMEQVLTGEGDEISSTWNEVCETFDEMGLHENLLRGIYAYGFEKPSAIQQRG 270 +D++ YDAKM +L +G + ++++EV +TFD MGL ENLLRGIYAYGFEKPSAIQQRG Sbjct: 11 FDSKQYDAKMNDLLANDGQDFFTSYDEVYDTFDSMGLQENLLRGIYAYGFEKPSAIQQRG 70
Query: 271 IVPFAKGLDVIQQAQSGTGKTATFCSGILQQLDYNLFDCQALVLAPTRELAQQIEKVMRA 450 IVPF KGLDVIQQAQSGTGKTATFCSGILQQLDY L CQALVLAPTRELAQQIEKVMRA Sbjct: 71 IVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRA 130
Query: 451 LGDYLQVKVHACVGGTSVREDIRILQSGVHVVVGTPGRVYDMLRRGSMRPEYI 609 LGDYL VKVHACVGGTSVRED RILQ+GVHVVVGTPGRV+DMLRR S+RP+YI Sbjct: 131 LGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYI 183
>tr|A9PA53|A9PA53_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 413
Score = 285 bits (728), Expect = 2e-75 Identities = 142/173 (82%), Positives = 152/173 (87%) Frame = +1
Query: 91 YDARAYDAKMEQVLTGEGDEISSTWNEVCETFDEMGLHENLLRGIYAYGFEKPSAIQQRG 270 YDA+ YDAKM +L +G + + + EV ETFD MGL ENLLRGIYAYGFEKPSAIQQRG Sbjct: 11 YDAKQYDAKMNDLLANDGQDFFTMYEEVFETFDSMGLQENLLRGIYAYGFEKPSAIQQRG 70
Query: 271 IVPFAKGLDVIQQAQSGTGKTATFCSGILQQLDYNLFDCQALVLAPTRELAQQIEKVMRA 450 IVPF KGLDVIQQAQSGTGKTATFCSGILQQLDY L CQALVLAPTRELAQQIEKVMRA Sbjct: 71 IVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRA 130
Query: 451 LGDYLQVKVHACVGGTSVREDIRILQSGVHVVVGTPGRVYDMLRRGSMRPEYI 609 LGDYL VKVHACVGGTSVRED RILQ+GVHVVVGTPGRV+DMLRR S+R +YI Sbjct: 131 LGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRQDYI 183
>tr|A7P4J8|A7P4J8_VITVI Chromosome chr4 scaffold_6, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00032180001 PE=3 SV=1 Length = 413
Score = 284 bits (727), Expect = 2e-75 Identities = 141/173 (81%), Positives = 156/173 (90%) Frame = +1
Query: 91 YDARAYDAKMEQVLTGEGDEISSTWNEVCETFDEMGLHENLLRGIYAYGFEKPSAIQQRG 270 +DAR YD+KM ++L +G + ++++EV E+FD MGL ENLLRGIYAYGFEKPSAIQQRG Sbjct: 11 FDARQYDSKMNELLGTDGQDFFTSYDEVYESFDAMGLQENLLRGIYAYGFEKPSAIQQRG 70
Query: 271 IVPFAKGLDVIQQAQSGTGKTATFCSGILQQLDYNLFDCQALVLAPTRELAQQIEKVMRA 450 IVPF KGLDVIQQAQSGTGKTATFCSGILQQLDY L +CQALVLAPTRELAQQIEKVMRA Sbjct: 71 IVPFIKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRA 130
Query: 451 LGDYLQVKVHACVGGTSVREDIRILQSGVHVVVGTPGRVYDMLRRGSMRPEYI 609 LGDYL VKVHACVGGTSVRED RIL SGVHVVVGTPGRV+DMLRR S+RP+YI Sbjct: 131 LGDYLGVKVHACVGGTSVREDQRILSSGVHVVVGTPGRVFDMLRRQSLRPDYI 183
>tr|Q4U474|Q4U474_PENAM Eukaryotic initiation factor 4A OS=Pennisetum americanum GN=eIF4A PE=2 SV=1 Length = 414
Score = 284 bits (726), Expect = 3e-75 Identities = 142/174 (81%), Positives = 160/174 (91%), Gaps = 1/174 (0%) Frame = +1
Query: 91 YDARAYDAKMEQVL-TGEGDEISSTWNEVCETFDEMGLHENLLRGIYAYGFEKPSAIQQR 267 +DA+ YD+KM+++L TGE +E ++++EV E+FD+MGL ENLLRGIYAYGFEKPSAIQQR Sbjct: 11 FDAKHYDSKMQELLSTGETEEFFTSYDEVFESFDDMGLQENLLRGIYAYGFEKPSAIQQR 70
Query: 268 GIVPFAKGLDVIQQAQSGTGKTATFCSGILQQLDYNLFDCQALVLAPTRELAQQIEKVMR 447 GIVPF KGLDVIQQAQSGTGKTATFCSGILQQLDY L +CQALVLAPTRELAQQIEKVMR Sbjct: 71 GIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMR 130
Query: 448 ALGDYLQVKVHACVGGTSVREDIRILQSGVHVVVGTPGRVYDMLRRGSMRPEYI 609 ALGDYL VKVHACVGGTSVRED RIL SGVHVVVGTPGRV+DMLRR S+RP++I Sbjct: 131 ALGDYLGVKVHACVGGTSVREDQRILASGVHVVVGTPGRVFDMLRRQSLRPDHI 184
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