DK955082 |
Clone id |
TST39A01NGRL0022_C11 |
Library |
TST39 |
Length |
621 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0022_C11. 5' end sequence. |
Accession |
DK955082 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL1920Contig1 |
Sequence |
CTTTGGTGTTGCAGGAGGTTGATTTTGTATGGAAGGGAAAAGGTTCACAGGTACTTTTAA CAGGCGATTTTCTTGACTGGGACGCAAAGGTGTCGCTTGAGAAGGGAACCGACGGGGCAT TTCACTACAAGCAGAAACTCTCTCCTGGAACCTACAAGTACAAGTATATCATAGATGGAG AGTGGGCTCATTCTCCGGATTGTCCTATGATTGAGGACGGCAAAGGTGGTTACAACAATC AAATTATCATTACAGATGGACCACTTGCTTCGACGAACTCACTTACACAAGAAAGTTCAC CAAAAGAAACAGCAGGTGTCAAGGACACAGGGAAGCCAGCGCCAAAAGCTGCCGCCCCAC CAAAGGCAGCAAAAGCAGATACAACGGCGGCGGCGGCACCTACAGCAGCAGCCCCGCCAA AGGCGGTGCCCGTGACAAAGCCGGCCAAGAAGGTTGAAAAGCCTTACCCAGAGGTGATTA CAGAAGATGTGATTCCCAGGGTTAAGTCCTTTTTGCAGAAAGAAGAAGGCATTTCAGATG TCGAACTTGTGTTCCAAGATAACCAGGGTGGAAGGGAGCTTTTTGAAGGGTGGAATCATC TACACATTCTGGGCTTTCTTT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P34164 |
Definition |
sp|P34164|SIP2_YEAST Protein SIP2 OS=Saccharomyces cerevisiae |
Align length |
89 |
Score (bit) |
57.0 |
E-value |
8.0e-08 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7HM94 |
Definition |
tr|A7HM94|A7HM94_FERNB Glycoside hydrolase family 13 domain protein OS=Fervidobacterium nodosum (strain ATCC 35602 / DSM 5306 / Rt17-B1) |
Align length |
101 |
Score (bit) |
68.6 |
E-value |
3.0e-10 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK955082|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0022_C11, 5' (621 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A7HM94|A7HM94_FERNB Glycoside hydrolase family 13 domain prot... 69 3e-10 tr|Q9LFY0|Q9LFY0_ARATH T7N9.13 OS=Arabidopsis thaliana GN=At1g27... 69 3e-10 tr|Q54UG7|Q54UG7_DICDI Putative glycoside hydrolase OS=Dictyoste... 67 1e-09 tr|Q8LCU3|Q8LCU3_ARATH Putative uncharacterized protein OS=Arabi... 65 3e-09 tr|Q9SSA3|Q9SSA3_ARATH F4P13.6 protein OS=Arabidopsis thaliana G... 65 4e-09 tr|A9UYP2|A9UYP2_MONBE Predicted protein OS=Monosiga brevicollis... 65 4e-09 tr|Q6AVV5|Q6AVV5_ORYSJ Isoamylase N-terminal domain containing p... 63 1e-08 tr|Q10F03|Q10F03_ORYSJ Isoamylase N-terminal domain containing p... 63 1e-08 tr|B8Q890|B8Q890_ORYSI SKIP interacting protein 4 (Fragment) OS=... 63 1e-08 tr|B8APL9|B8APL9_ORYSI Putative uncharacterized protein OS=Oryza... 63 1e-08 tr|A3ALJ0|A3ALJ0_ORYSJ Putative uncharacterized protein OS=Oryza... 63 1e-08 tr|Q5DEQ6|Q5DEQ6_SCHJA SJCHGC00891 protein OS=Schistosoma japoni... 63 2e-08 tr|A7Y9I6|A7Y9I6_BOMMO AMP-activated protein kinase beta subunit... 62 2e-08 tr|Q0V3C0|Q0V3C0_PHANO Putative uncharacterized protein OS=Phaeo... 62 2e-08 tr|B2VYL5|B2VYL5_PYRTR Putative uncharacterized protein OS=Pyren... 62 2e-08 tr|A4RUZ4|A4RUZ4_OSTLU Predicted protein OS=Ostreococcus lucimar... 62 3e-08 tr|A7TTP9|A7TTP9_VANPO Putative uncharacterized protein OS=Vande... 62 3e-08 tr|A8BQL1|A8BQL1_GIALA 5'-AMP-activated protein kinase, beta-1 s... 62 4e-08 tr|Q55DB7|Q55DB7_DICDI Putative uncharacterized protein OS=Dicty... 61 6e-08 tr|A9RJG5|A9RJG5_PHYPA Predicted protein OS=Physcomitrella paten... 60 8e-08 tr|A8JHV0|A8JHV0_CHLRE Predicted protein OS=Chlamydomonas reinha... 60 8e-08 tr|Q9X2G0|Q9X2G0_THEMA Putative uncharacterized protein OS=Therm... 60 1e-07 tr|B1LAI1|B1LAI1_THESQ Glycoside hydrolase family 13 domain prot... 60 1e-07 tr|B7G0Q5|B7G0Q5_PHATR Predicted protein OS=Phaeodactylum tricor... 60 1e-07 tr|Q6FNJ8|Q6FNJ8_CANGA Strain CBS138 chromosome J complete seque... 60 1e-07 tr|A9SVA8|A9SVA8_PHYPA Predicted protein (Fragment) OS=Physcomit... 59 2e-07 tr|Q944A6|Q944A6_ARATH At1g09020/F7G19_11 (AKINbetagamma) OS=Ara... 59 2e-07 tr|Q2QCL5|Q2QCL5_ARATH AKINbetagammaI OS=Arabidopsis thaliana PE... 59 2e-07 tr|A5ILA5|A5ILA5_THEP1 Glycoside hydrolase, family 13 domain pro... 59 3e-07 tr|B7RF17|B7RF17_9THEM Isoamylase N-terminal domain protein OS=M... 59 3e-07
>tr|A7HM94|A7HM94_FERNB Glycoside hydrolase family 13 domain protein OS=Fervidobacterium nodosum (strain ATCC 35602 / DSM 5306 / Rt17-B1) GN=Fnod_1180 PE=4 SV=1 Length = 648
Score = 68.6 bits (166), Expect = 3e-10 Identities = 38/101 (37%), Positives = 59/101 (58%), Gaps = 3/101 (2%) Frame = +3
Query: 15 EVDFVWKGKGSQVLLTGDFLDWDAKVSLEKGTDGAFHYKQKLSPGTYKYKYIIDGE-WAH 191 +V F +K + + V L G+F +W+ K TDG + Y+ +L PG+Y+YKY+IDG+ W Sbjct: 32 KVVFTFKAEANVVYLAGNFNNWNPTAWPMKLTDGVWTYEVELKPGSYQYKYVIDGKTWKE 91
Query: 192 SPDCP-MIEDGKGGYNNQIIIT-DGPLASTNSLTQESSPKE 308 P+ P ++DG GG N +T DG + TQ+S K+ Sbjct: 92 DPEAPAYVDDGFGGKNGAFTLTADGKILGEQG-TQQSQGKK 131
Score = 43.1 bits (100), Expect = 0.013 Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 2/64 (3%) Frame = +3
Query: 51 VLLTGDFLDWDAKVSLEKGTD-GAFHYKQKLSPGTYKYKYIIDGEWAHSPDC-PMIEDGK 224 V + G F +W+ K + D G + +LSPG Y+YK+IIDG W P+ +DG Sbjct: 162 VFIAGSFNNWNDKDTECYYVDAGWWEAVLELSPGIYEYKFIIDGNWTVDPNAFGYTDDGF 221
Query: 225 GGYN 236 GG N Sbjct: 222 GGKN 225
Score = 41.6 bits (96), Expect = 0.038 Identities = 28/88 (31%), Positives = 42/88 (47%), Gaps = 7/88 (7%) Frame = +3
Query: 27 VWKGKGSQVLLTGDFLDWDAKVSLEKGTDGAFHYKQKLSPGTYKYKYI--IDGE--WAHS 194 V K + L G F W+ K + +G + L PGTY+YKY+ I G W Sbjct: 281 VKKENAQEAYLAGSFNSWNPKALKMQLVNGYWVASLVLQPGTYEYKYVFLIGGNYVWEED 340
Query: 195 PDCPMIE-DGKGGYNN--QIIITDGPLA 269 P+ P + DG GG N +++ DG ++ Sbjct: 341 PNAPGYKSDGYGGKNGIFKLVQKDGKIS 368
>tr|Q9LFY0|Q9LFY0_ARATH T7N9.13 OS=Arabidopsis thaliana GN=At1g27070 PE=4 SV=1 Length = 532
Score = 68.6 bits (166), Expect = 3e-10 Identities = 31/82 (37%), Positives = 46/82 (56%) Frame = +3
Query: 6 VLQEVDFVWKGKGSQVLLTGDFLDWDAKVSLEKGTDGAFHYKQKLSPGTYKYKYIIDGEW 185 +L+ VW S+VLLTG F W + ++K +G F KL PG Y+ K+I+DG+W Sbjct: 451 LLRTASIVWPNSASEVLLTGSFDGWSTQRKMKKAENGVFSLSLKLYPGKYEIKFIVDGQW 510
Query: 186 AHSPDCPMIEDGKGGYNNQIII 251 P P++ GGY N ++I Sbjct: 511 KVDPLRPIVT--SGGYENNLLI 530
>tr|Q54UG7|Q54UG7_DICDI Putative glycoside hydrolase OS=Dictyostelium discoideum GN=prkab PE=4 SV=1 Length = 347
Score = 66.6 bits (161), Expect = 1e-09 Identities = 34/94 (36%), Positives = 52/94 (55%), Gaps = 1/94 (1%) Frame = +3
Query: 24 FVWKGKGSQVLLTGDFLDWDAKVSLEKGTDGAFHYKQKLSPGTYKYKYIIDGEWAHSPDC 203 F W G G V ++G F +W K+ L + ++ F L+PG ++YKYI+DG+W HS + Sbjct: 160 FTWSGGGKDVYVSGSFNNWKEKIPLSR-SEKDFTLIYNLAPGVHQYKYIVDGKWIHSTEQ 218
Query: 204 PMIEDGKGGYNNQIIITD-GPLASTNSLTQESSP 302 P+ D KG N I + + P N+L S+P Sbjct: 219 PVAADIKGNLLNFIEVKNKDPSNDLNTLKLSSTP 252
>tr|Q8LCU3|Q8LCU3_ARATH Putative uncharacterized protein OS=Arabidopsis thaliana PE=2 SV=1 Length = 591
Score = 65.1 bits (157), Expect = 3e-09 Identities = 37/103 (35%), Positives = 55/103 (53%), Gaps = 2/103 (1%) Frame = +3
Query: 18 VDFVWKG-KGSQVLLTGDFL-DWDAKVSLEKGTDGAFHYKQKLSPGTYKYKYIIDGEWAH 191 V FVW G +G +VLL GDF +W + F + +L+ G Y YKYII+G+W H Sbjct: 457 VTFVWNGHEGEEVLLVGDFTGNWKEPIKATHKGGPRFETEVRLTQGKYYYKYIINGDWRH 516
Query: 192 SPDCPMIEDGKGGYNNQIIITDGPLASTNSLTQESSPKETAGV 320 S P D +G NN I++ G +A+ Q+ P++ A + Sbjct: 517 SATSPTERDDRGNTNNIIVV--GDVANVRPTIQQ--PRKDANI 555
>tr|Q9SSA3|Q9SSA3_ARATH F4P13.6 protein OS=Arabidopsis thaliana GN=F4P13.6 PE=4 SV=1 Length = 716
Score = 64.7 bits (156), Expect = 4e-09 Identities = 33/82 (40%), Positives = 45/82 (54%), Gaps = 2/82 (2%) Frame = +3
Query: 18 VDFVWKG-KGSQVLLTGDFL-DWDAKVSLEKGTDGAFHYKQKLSPGTYKYKYIIDGEWAH 191 V FVW G +G +VLL GDF +W + F + +L+ G Y YKYII+G+W H Sbjct: 616 VTFVWNGHEGEEVLLVGDFTGNWKEPIKATHKGGPRFETEVRLTQGKYYYKYIINGDWRH 675
Query: 192 SPDCPMIEDGKGGYNNQIIITD 257 S P D +G NN I++ D Sbjct: 676 SATSPTERDDRGNTNNIIVVGD 697
>tr|A9UYP2|A9UYP2_MONBE Predicted protein OS=Monosiga brevicollis GN=25195 PE=4 SV=1 Length = 324
Score = 64.7 bits (156), Expect = 4e-09 Identities = 27/76 (35%), Positives = 39/76 (51%) Frame = +3
Query: 12 QEVDFVWKGKGSQVLLTGDFLDWDAKVSLEKGTDGAFHYKQKLSPGTYKYKYIIDGEWAH 191 QE+ W G + + G F W V + + DG F K L+PG+Y+YK+I+D EW H Sbjct: 128 QEITVTWTHGGQDIRIAGTFNHWGDPVKMTRRPDGVFEAKLLLAPGSYEYKFIVDREWKH 187
Query: 192 SPDCPMIEDGKGGYNN 239 P + + G NN Sbjct: 188 DARLPTLRNSFGSVNN 203
>tr|Q6AVV5|Q6AVV5_ORYSJ Isoamylase N-terminal domain containing protein OS=Oryza sativa subsp. japonica GN=OSJNBb0024N19.10 PE=4 SV=1 Length = 466
Score = 63.2 bits (152), Expect = 1e-08 Identities = 30/82 (36%), Positives = 46/82 (56%) Frame = +3
Query: 9 LQEVDFVWKGKGSQVLLTGDFLDWDAKVSLEKGTDGAFHYKQKLSPGTYKYKYIIDGEWA 188 L+ V VW S+VLLTG F W ++ +E+ G F +L PG Y+ K+I+DG W Sbjct: 386 LRTVYIVWSNPASEVLLTGSFDGWTSQRRMERSERGTFSLNLRLYPGRYEIKFIVDGVWR 445
Query: 189 HSPDCPMIEDGKGGYNNQIIIT 254 + P P++ + G NN + +T Sbjct: 446 NDPLRPLVSN-NGHENNLLTVT 466
>tr|Q10F03|Q10F03_ORYSJ Isoamylase N-terminal domain containing protein, expressed OS=Oryza sativa subsp. japonica GN=LOC_Os03g48170 PE=4 SV=1 Length = 529
Score = 63.2 bits (152), Expect = 1e-08 Identities = 30/82 (36%), Positives = 46/82 (56%) Frame = +3
Query: 9 LQEVDFVWKGKGSQVLLTGDFLDWDAKVSLEKGTDGAFHYKQKLSPGTYKYKYIIDGEWA 188 L+ V VW S+VLLTG F W ++ +E+ G F +L PG Y+ K+I+DG W Sbjct: 449 LRTVYIVWSNPASEVLLTGSFDGWTSQRRMERSERGTFSLNLRLYPGRYEIKFIVDGVWR 508
Query: 189 HSPDCPMIEDGKGGYNNQIIIT 254 + P P++ + G NN + +T Sbjct: 509 NDPLRPLVSN-NGHENNLLTVT 529
>tr|B8Q890|B8Q890_ORYSI SKIP interacting protein 4 (Fragment) OS=Oryza sativa subsp. indica GN=SIP4 PE=2 SV=1 Length = 324
Score = 63.2 bits (152), Expect = 1e-08 Identities = 30/82 (36%), Positives = 46/82 (56%) Frame = +3
Query: 9 LQEVDFVWKGKGSQVLLTGDFLDWDAKVSLEKGTDGAFHYKQKLSPGTYKYKYIIDGEWA 188 L+ V VW S+VLLTG F W ++ +E+ G F +L PG Y+ K+I+DG W Sbjct: 244 LRTVYIVWSNPASEVLLTGSFDGWTSQRRMERSERGTFSLNLRLYPGRYEIKFIVDGVWR 303
Query: 189 HSPDCPMIEDGKGGYNNQIIIT 254 + P P++ + G NN + +T Sbjct: 304 NDPLRPLVSN-NGHENNLLTVT 324
>tr|B8APL9|B8APL9_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_13071 PE=4 SV=1 Length = 529
Score = 63.2 bits (152), Expect = 1e-08 Identities = 30/82 (36%), Positives = 46/82 (56%) Frame = +3
Query: 9 LQEVDFVWKGKGSQVLLTGDFLDWDAKVSLEKGTDGAFHYKQKLSPGTYKYKYIIDGEWA 188 L+ V VW S+VLLTG F W ++ +E+ G F +L PG Y+ K+I+DG W Sbjct: 449 LRTVYIVWSNPASEVLLTGSFDGWTSQRRMERSERGTFSLNLRLYPGRYEIKFIVDGVWR 508
Query: 189 HSPDCPMIEDGKGGYNNQIIIT 254 + P P++ + G NN + +T Sbjct: 509 NDPLRPLVSN-NGHENNLLTVT 529
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