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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK955086
Clone id TST39A01NGRL0022_C15
Library
Length 503
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0022_C15. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID -
Sequence 
CTAAAATCCATTACCACTTCTGCGAGTCGCCCTGCGAGTTGAGCTTACACAGCGGTCAAG
ATGATCGATGATCAAGATCTGGGTTTCTTTGCCAACTTCCTGGGGATCTTTATATTTGTA
ATGGTAGTTGCTTACCACTATGTAGTGGCAGACCCCAAATATGATTGACCTCACTTTTCA
AAAGAGGAGTCATTTTTGTAGAGTTATGGCAAGTGAAGTGATTAATTAAAGCTCACACTT
GTATAACATGCATCATGGATTATCCTTACGAGCAGAAGTGATGTTAAATTGAGGGCTTCG
TTTTCTTTTGTTGGCTCGATAGGGAAAGGAACTCTGCTCTGCAGGAAGAGACCATGTCAA
TCTCTTCCTGTTCACTTCACACCTTGCCTTTTGGTGGTTCTGATGTCAAAGCTTTTATGT
AAATGATTGATATAGACAGAAGTATGTGTTTTTTGTTGTTATGCTCGTGCCAGAAACAAT
CAGATTGAGAGCTGTCTTTCAAT
■■Homology search results ■■ -
sp_hit_id B0BLS0
Definition sp|B0BLS0|OST4_RAT Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 4 OS=Rattus norvegicus
Align length 34
Score (bit) 39.3
E-value 0.01
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK955086|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0022_C15, 5'
         (488 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|B0BLS0|OST4_RAT Dolichyl-diphosphooligosaccharide--protein gl...    39   0.010
sp|Q99LX8|OST4_MOUSE Dolichyl-diphosphooligosaccharide--protein ...    39   0.010
sp|P0C6T2|OST4_HUMAN Dolichyl-diphosphooligosaccharide--protein ...    39   0.010
sp|P56716|RP1_MOUSE Oxygen-regulated protein 1 OS=Mus musculus G...    30   4.5  
sp|Q6LHL2|MODC_PHOPR Molybdenum import ATP-binding protein modC ...    29   9.9  

>sp|B0BLS0|OST4_RAT Dolichyl-diphosphooligosaccharide--protein
           glycosyltransferase subunit 4 OS=Rattus norvegicus
           GN=Ost4 PE=3 SV=1
          Length = 37

 Score = 39.3 bits (90), Expect = 0.010
 Identities = 19/34 (55%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
 Frame = +1

Query: 46  MIDDQDLGFFANFLGIFIFVMVVAYHYV-VADPK 144
           MI D  L  FAN LG+ +F++VV YHYV V +PK
Sbjct: 1   MITDVQLAIFANMLGVSLFLLVVLYHYVAVNNPK 34


>sp|Q99LX8|OST4_MOUSE Dolichyl-diphosphooligosaccharide--protein
           glycosyltransferase subunit 4 OS=Mus musculus GN=Ost4
           PE=2 SV=1
          Length = 37

 Score = 39.3 bits (90), Expect = 0.010
 Identities = 19/34 (55%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
 Frame = +1

Query: 46  MIDDQDLGFFANFLGIFIFVMVVAYHYV-VADPK 144
           MI D  L  FAN LG+ +F++VV YHYV V +PK
Sbjct: 1   MITDVQLAIFANMLGVSLFLLVVLYHYVAVNNPK 34


>sp|P0C6T2|OST4_HUMAN Dolichyl-diphosphooligosaccharide--protein
           glycosyltransferase subunit 4 OS=Homo sapiens GN=OST4
           PE=3 SV=1
          Length = 37

 Score = 39.3 bits (90), Expect = 0.010
 Identities = 19/34 (55%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
 Frame = +1

Query: 46  MIDDQDLGFFANFLGIFIFVMVVAYHYV-VADPK 144
           MI D  L  FAN LG+ +F++VV YHYV V +PK
Sbjct: 1   MITDVQLAIFANMLGVSLFLLVVLYHYVAVNNPK 34


>sp|P56716|RP1_MOUSE Oxygen-regulated protein 1 OS=Mus musculus GN=Rp1
            PE=2 SV=2
          Length = 2095

 Score = 30.4 bits (67), Expect = 4.5
 Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
 Frame = -2

Query: 193  HNSTKMTPLLK-SEVNHIWGLPLHSGKQLPLQI*RSPGSWQRNPDLDHRSS*PLCKLNS 20
            H +T+  PL    + +   G+P HSGK    +  ++  S+   PD +HR S PLC+  S
Sbjct: 870  HVTTRADPLASLKKPDFPEGIPHHSGKSYVKRWLQNINSY---PDFEHRKSGPLCQNRS 925


>sp|Q6LHL2|MODC_PHOPR Molybdenum import ATP-binding protein modC
           OS=Photobacterium profundum GN=modC PE=3 SV=1
          Length = 358

 Score = 29.3 bits (64), Expect = 9.9
 Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
 Frame = -3

Query: 132 HYIVVSNYHY--KYKDPQEVGKETQILIIDHL 43
           HY V+ N HY   +KDPQ       +L I+HL
Sbjct: 89  HYTVMGNLHYGCDHKDPQHFNDIVTLLGIEHL 120
tr_hit_id A9NJR6
Definition tr|A9NJR6|A9NJR6_PICSI Putative uncharacterized protein OS=Picea sitchensis
Align length 35
Score (bit) 73.2
E-value 6.0e-12
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK955086|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0022_C15, 5'
         (488 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9NJR6|A9NJR6_PICSI Putative uncharacterized protein OS=Picea...    73   6e-12
tr|Q2HT92|Q2HT92_MEDTR Putative uncharacterized protein OS=Medic...    71   3e-11
tr|A9PDB3|A9PDB3_POPTR Putative uncharacterized protein OS=Popul...    70   4e-11
tr|B8B8M1|B8B8M1_ORYSI Putative uncharacterized protein OS=Oryza...    70   7e-11
tr|B6SLI6|B6SLI6_MAIZE Putative uncharacterized protein OS=Zea m...    69   1e-10
tr|A9PDB6|A9PDB6_POPTR Putative uncharacterized protein OS=Popul...    69   2e-10
tr|A9P9S0|A9P9S0_POPTR Putative uncharacterized protein OS=Popul...    69   2e-10
tr|Q9LHK3|Q9LHK3_ARATH Gb|AAF23278.1 (Putative uncharacterized p...    68   3e-10
tr|Q9C7B2|Q9C7B2_ARATH Putative uncharacterized protein T2E22.10...    68   3e-10
tr|Q8L986|Q8L986_ARATH Putative uncharacterized protein (At5g025...    68   3e-10
tr|Q9SF57|Q9SF57_ARATH Putative uncharacterized protein F11F8_3 ...    67   4e-10
tr|Q8IH26|Q8IH26_DROME GM20929p (Fragment) OS=Drosophila melanog...    45   0.001
tr|B4QH87|B4QH87_DROSI GD10077 OS=Drosophila simulans GN=GD10077...    43   0.009
tr|B4HSS0|B4HSS0_DROSE GM20604 OS=Drosophila sechellia GN=GM2060...    43   0.009
tr|B4P417|B4P417_DROYA GE22313 OS=Drosophila yakuba GN=GE22313 P...    42   0.012
tr|B5E1E8|B5E1E8_DROPS GA24324 OS=Drosophila pseudoobscura pseud...    42   0.015
tr|B4MJN5|B4MJN5_DROWI GK20863 OS=Drosophila willistoni GN=GK208...    42   0.015
tr|B4MDV2|B4MDV2_DROVI GJ18037 OS=Drosophila virilis GN=GJ18037 ...    42   0.015
tr|B4KQ08|B4KQ08_DROMO GI16965 OS=Drosophila mojavensis GN=GI169...    42   0.015
tr|B4J877|B4J877_DROGR GH21310 OS=Drosophila grimshawi GN=GH2131...    42   0.015
tr|B4GHS8|B4GHS8_DROPE GL16887 OS=Drosophila persimilis GN=GL168...    42   0.015
tr|B3N7H1|B3N7H1_DROER GG10558 OS=Drosophila erecta GN=GG10558 P...    42   0.015
tr|B3MFK1|B3MFK1_DROAN GF13081 OS=Drosophila ananassae GN=GF1308...    42   0.015
tr|A1Z7U3|A1Z7U3_DROME CG33774 OS=Drosophila melanogaster GN=CG3...    42   0.015
tr|Q7Q6M5|Q7Q6M5_ANOGA AGAP005764-PA OS=Anopheles gambiae GN=AGA...    40   0.059
tr|Q8UW71|Q8UW71_XENLA P11F3 OS=Xenopus laevis GN=P11F3 PE=4 SV=1      40   0.076
tr|B5G114|B5G114_TAEGU Putative uncharacterized protein OS=Taeni...    39   0.100
tr|B5X758|B5X758_SALSA Dolichyl-diphosphooligosaccharide--protei...    39   0.13 
tr|Q5MIZ4|Q5MIZ4_AEDAL GM20929p-like protein OS=Aedes albopictus...    39   0.13 
tr|Q4PM19|Q4PM19_IXOSC Putative oligosaccharyltransferase subuni...    37   0.50 

>tr|A9NJR6|A9NJR6_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=4 SV=1
          Length = 38

 Score = 73.2 bits (178), Expect = 6e-12
 Identities = 32/35 (91%), Positives = 35/35 (100%)
 Frame = +1

Query: 46  MIDDQDLGFFANFLGIFIFVMVVAYHYVVADPKYD 150
           MIDDQDLGFFANFLGIFIFV+VVAYHYV+ADPKY+
Sbjct: 1   MIDDQDLGFFANFLGIFIFVLVVAYHYVIADPKYE 35


>tr|Q2HT92|Q2HT92_MEDTR Putative uncharacterized protein OS=Medicago
           truncatula GN=MtrDRAFT_AC150776g30v2 PE=4 SV=2
          Length = 38

 Score = 70.9 bits (172), Expect = 3e-11
 Identities = 30/35 (85%), Positives = 34/35 (97%)
 Frame = +1

Query: 46  MIDDQDLGFFANFLGIFIFVMVVAYHYVVADPKYD 150
           MIDD DLGFFANFLG+FIFV+V+AYHYVVADPKY+
Sbjct: 2   MIDDNDLGFFANFLGVFIFVLVIAYHYVVADPKYE 36


>tr|A9PDB3|A9PDB3_POPTR Putative uncharacterized protein OS=Populus
           trichocarpa PE=4 SV=1
          Length = 37

 Score = 70.5 bits (171), Expect = 4e-11
 Identities = 30/35 (85%), Positives = 34/35 (97%)
 Frame = +1

Query: 46  MIDDQDLGFFANFLGIFIFVMVVAYHYVVADPKYD 150
           M DDQDLGFFANFLGIFIFV+V+AYHYV+ADPKY+
Sbjct: 1   MFDDQDLGFFANFLGIFIFVLVIAYHYVMADPKYE 35


>tr|B8B8M1|B8B8M1_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_26901 PE=4 SV=1
          Length = 52

 Score = 69.7 bits (169), Expect = 7e-11
 Identities = 29/37 (78%), Positives = 36/37 (97%)
 Frame = +1

Query: 40  VKMIDDQDLGFFANFLGIFIFVMVVAYHYVVADPKYD 150
           ++M DDQDLGFFANFLGIFIFV+V+AYH+V+ADPKY+
Sbjct: 14  LQMFDDQDLGFFANFLGIFIFVLVIAYHFVMADPKYE 50


>tr|B6SLI6|B6SLI6_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=4 SV=1
          Length = 37

 Score = 68.9 bits (167), Expect = 1e-10
 Identities = 29/35 (82%), Positives = 34/35 (97%)
 Frame = +1

Query: 46  MIDDQDLGFFANFLGIFIFVMVVAYHYVVADPKYD 150
           M DDQDLGFFANFLGIFIFV+V+AYH+V+ADPKY+
Sbjct: 1   MFDDQDLGFFANFLGIFIFVLVIAYHFVMADPKYE 35


>tr|A9PDB6|A9PDB6_POPTR Putative uncharacterized protein OS=Populus
           trichocarpa PE=4 SV=1
          Length = 37

 Score = 68.6 bits (166), Expect = 2e-10
 Identities = 29/35 (82%), Positives = 33/35 (94%)
 Frame = +1

Query: 46  MIDDQDLGFFANFLGIFIFVMVVAYHYVVADPKYD 150
           M DDQDLGFF NFLGIFIFV+V+AYHYV+ADPKY+
Sbjct: 1   MFDDQDLGFFPNFLGIFIFVLVIAYHYVMADPKYE 35


>tr|A9P9S0|A9P9S0_POPTR Putative uncharacterized protein OS=Populus
           trichocarpa PE=4 SV=1
          Length = 37

 Score = 68.6 bits (166), Expect = 2e-10
 Identities = 30/35 (85%), Positives = 33/35 (94%)
 Frame = +1

Query: 46  MIDDQDLGFFANFLGIFIFVMVVAYHYVVADPKYD 150
           M DDQDLGF ANFLGIFIFV+V+AYHYVVADPKY+
Sbjct: 1   MFDDQDLGFCANFLGIFIFVLVIAYHYVVADPKYE 35


>tr|Q9LHK3|Q9LHK3_ARATH Gb|AAF23278.1 (Putative uncharacterized
           protein) OS=Arabidopsis thaliana PE=4 SV=1
          Length = 37

 Score = 67.8 bits (164), Expect = 3e-10
 Identities = 29/35 (82%), Positives = 32/35 (91%)
 Frame = +1

Query: 46  MIDDQDLGFFANFLGIFIFVMVVAYHYVVADPKYD 150
           MIDDQDLGF ANFLGIFIF +V+AYHYV ADPKY+
Sbjct: 1   MIDDQDLGFIANFLGIFIFALVIAYHYVTADPKYE 35


>tr|Q9C7B2|Q9C7B2_ARATH Putative uncharacterized protein T2E22.10
            OS=Arabidopsis thaliana GN=T2E22.10 PE=4 SV=1
          Length = 1211

 Score = 67.8 bits (164), Expect = 3e-10
 Identities = 29/35 (82%), Positives = 32/35 (91%)
 Frame = +1

Query: 46   MIDDQDLGFFANFLGIFIFVMVVAYHYVVADPKYD 150
            MIDDQDLGF ANFLGIFIF +V+AYHYV ADPKY+
Sbjct: 1175 MIDDQDLGFIANFLGIFIFALVIAYHYVTADPKYE 1209


>tr|Q8L986|Q8L986_ARATH Putative uncharacterized protein (At5g02502)
           OS=Arabidopsis thaliana PE=4 SV=1
          Length = 35

 Score = 67.8 bits (164), Expect = 3e-10
 Identities = 28/35 (80%), Positives = 34/35 (97%)
 Frame = +1

Query: 46  MIDDQDLGFFANFLGIFIFVMVVAYHYVVADPKYD 150
           M DDQDLGFFANFLGIFIF+MV+AYH+VVA+PK++
Sbjct: 1   MFDDQDLGFFANFLGIFIFIMVIAYHFVVAEPKFE 35