DK955094 |
Clone id |
TST39A01NGRL0022_C23 |
Library |
TST39 |
Length |
626 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0022_C23. 5' end sequence. |
Accession |
DK955094 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL3127Contig1 |
Sequence |
CGACAGTAATACATTTCTGCGTTTTCAGCTTCGACGACCTTGTACATAAGGAGAGATATG GCATCGCCGTCGTCTGCAGCATCGTCTCCTCACAGCACGATGCAGTTTCTCAGTTCTCTG CTATCACAACGAGGTCCTAACGCGCTGCCTTACAGCGAGGACGTGAAGCTCCTTATTCGG CAGCATCTGCTGAATTTGATGCAAGAGCTTCCCAGCTTGCGTGCCAAGCCGGCCTCCTTC GTGCACAACGATGGAACCTCTGCAAATCTCCTACAGGTTGATGGCACGGTTCCCATGACC TTTCATGGTGCCTCCTACAACATTCCCGTCATCATCTGGCTTCTTGAGTCCTACCCCAAG GCACCTCCTCGTGTCTTCGTCTCCCCTACCAAAGACATGATCATCAAGCGCCCTCACAAA CACGTCGATGCATCAGGTATGGTCTCCCTTCCTTATCTCCAAAGCTGGTTTTACCCTCGC TCCAATCTTGCAGACCTTGCACGTGCACTTAGCTCCATGTTCAGTCAAGATCCGCCCCTC TTCTCGAAGCCCTCTTCCCCTTCTTCAAACCATCGCACAAACTCGGCTGCCTCTCCAGCA TCTGGTGCATTTGCGAGCTACACATC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q6IRE4 |
Definition |
sp|Q6IRE4|TS101_RAT Tumor susceptibility gene 101 protein OS=Rattus norvegicus |
Align length |
121 |
Score (bit) |
103.0 |
E-value |
7.0e-22 |
Report |
 |
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q9LHG8 |
Definition |
tr|Q9LHG8|Q9LHG8_ARATH And human tumor susceptibility gene-like protein (Putative uncharacterized protein At3g12400) (Putative uncharacterized protein) (Putative uncharacterized protein T2E22.28) OS=Arabidopsis thaliana |
Align length |
143 |
Score (bit) |
209.0 |
E-value |
1.0e-52 |
Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK955094|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0022_C23, 5' (626 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q9LHG8|Q9LHG8_ARATH And human tumor susceptibility gene-like ... 209 1e-52 tr|A7QHJ8|A7QHJ8_VITVI Chromosome chr5 scaffold_98, whole genome... 209 1e-52 tr|A9PJF9|A9PJF9_POPJC Putative uncharacterized protein OS=Popul... 203 8e-51 tr|Q9FFY6|Q9FFY6_ARATH Similarity to nascent polypeptide associa... 202 1e-50 tr|A7PKJ3|A7PKJ3_VITVI Chromosome chr15 scaffold_19, whole genom... 190 7e-47 tr|Q6ESB7|Q6ESB7_ORYSJ Os02g0833300 protein OS=Oryza sativa subs... 177 3e-43 tr|B8AFJ3|B8AFJ3_ORYSI Putative uncharacterized protein OS=Oryza... 177 3e-43 tr|A9TJ74|A9TJ74_PHYPA Predicted protein OS=Physcomitrella paten... 174 5e-42 tr|A9S7R6|A9S7R6_PHYPA Predicted protein OS=Physcomitrella paten... 168 3e-40 tr|A8IU80|A8IU80_CHLRE Subunit of the ESCRT-I complex OS=Chlamyd... 141 4e-32 tr|A3AD24|A3AD24_ORYSJ Putative uncharacterized protein OS=Oryza... 135 2e-30 tr|A7SAT5|A7SAT5_NEMVE Predicted protein OS=Nematostella vectens... 111 4e-23 tr|Q6IQ70|Q6IQ70_DANRE Tumor susceptibility gene 101 OS=Danio re... 103 8e-21 tr|Q3UCW0|Q3UCW0_MOUSE Putative uncharacterized protein OS=Mus m... 103 8e-21 tr|Q4SAD8|Q4SAD8_TETNG Chromosome 13 SCAF14688, whole genome sho... 102 1e-20 tr|Q5C2L5|Q5C2L5_SCHJA SJCHGC08434 protein (Fragment) OS=Schisto... 102 1e-20 tr|Q6P2Z8|Q6P2Z8_XENTR Tumor susceptibility gene 101 OS=Xenopus ... 102 2e-20 tr|Q6NUD5|Q6NUD5_XENLA MGC81040 protein OS=Xenopus laevis GN=MGC... 102 2e-20 tr|Q6DDX9|Q6DDX9_XENLA Tsg101-prov protein OS=Xenopus laevis GN=... 102 2e-20 tr|Q3UK08|Q3UK08_MOUSE Putative uncharacterized protein OS=Mus m... 102 2e-20 tr|Q09HA5|Q09HA5_MACMU Tumor susceptibility protein 101 (Fragmen... 102 2e-20 tr|Q09HA3|Q09HA3_MACMU Tumor susceptibility protein 101 (Fragmen... 102 2e-20 tr|A5BKV4|A5BKV4_VITVI Putative uncharacterized protein OS=Vitis... 101 3e-20 tr|Q9I8G8|Q9I8G8_CHEMY Tumor susceptibility protein 101 OS=Chelo... 101 4e-20 tr|A3KN51|A3KN51_BOVIN TSG101 protein OS=Bos taurus GN=TSG101 PE... 101 4e-20 tr|Q5RC92|Q5RC92_PONAB Putative uncharacterized protein DKFZp459... 100 5e-20 tr|Q09HB3|Q09HB3_MACMU Tumor susceptibility protein 101 (Fragmen... 100 5e-20 tr|Q09HA7|Q09HA7_MACMU Tumor susceptibility protein 101 (Fragmen... 100 5e-20 tr|Q09HA2|Q09HA2_MACMU Tumor susceptibility protein 101 (Fragmen... 100 5e-20 tr|Q09HC3|Q09HC3_MACMU Tumor susceptibility protein 101 (Fragmen... 100 7e-20
>tr|Q9LHG8|Q9LHG8_ARATH And human tumor susceptibility gene-like protein (Putative uncharacterized protein At3g12400) (Putative uncharacterized protein) (Putative uncharacterized protein T2E22.28) OS=Arabidopsis thaliana GN=T2E22.28 PE=2 SV=1 Length = 398
Score = 209 bits (531), Expect = 1e-52 Identities = 99/143 (69%), Positives = 114/143 (79%) Frame = +1
Query: 103 QFLSSLLSQRGPNALPYSEDVKLLIRQHLLNLMQELPSLRAKPASFVHNDGTSANLLQVD 282 QFLSS LSQRGP+++PY E K LIRQHLLNL+ PSL K ASF+HNDG S NLLQ D Sbjct: 13 QFLSSALSQRGPSSVPYEESNKWLIRQHLLNLISSYPSLEPKTASFMHNDGRSVNLLQAD 72
Query: 283 GTVPMTFHGASYNIPVIIWLLESYPKAPPRVFVSPTKDMIIKRPHKHVDASGMVSLPYLQ 462 GT+PM FHG +YNIPVIIWLLESYP+ PP V+V+PT DMIIKRPH HV SG+VSLPYLQ Sbjct: 73 GTIPMPFHGVTYNIPVIIWLLESYPRHPPCVYVNPTADMIIKRPHAHVTPSGLVSLPYLQ 132
Query: 463 SWFYPRSNLADLARALSSMFSQD 531 +W YP SNL DL LS+ F++D Sbjct: 133 NWVYPSSNLVDLVSDLSAAFARD 155
>tr|A7QHJ8|A7QHJ8_VITVI Chromosome chr5 scaffold_98, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00038814001 PE=4 SV=1 Length = 425
Score = 209 bits (531), Expect = 1e-52 Identities = 97/145 (66%), Positives = 120/145 (82%) Frame = +1
Query: 97 TMQFLSSLLSQRGPNALPYSEDVKLLIRQHLLNLMQELPSLRAKPASFVHNDGTSANLLQ 276 T Q+LSS+LSQRGP+ALPY+EDVK LIRQHLL+L + PSL+ K A++ HNDG + NLLQ Sbjct: 23 TQQWLSSVLSQRGPSALPYAEDVKWLIRQHLLSLSENYPSLQPKTATYTHNDGRTVNLLQ 82
Query: 277 VDGTVPMTFHGASYNIPVIIWLLESYPKAPPRVFVSPTKDMIIKRPHKHVDASGMVSLPY 456 DGTVPM + +YNIP+IIWL+ESYP+ PP V+V+PT+DM+IKRPH HV+ SGMVS+PY Sbjct: 83 SDGTVPMLYLDVTYNIPIIIWLMESYPRHPPCVYVNPTRDMVIKRPHSHVNPSGMVSIPY 142
Query: 457 LQSWFYPRSNLADLARALSSMFSQD 531 L SW YP SNL DLAR LS +FS+D Sbjct: 143 LHSWVYPSSNLVDLARNLSHVFSRD 167
>tr|A9PJF9|A9PJF9_POPJC Putative uncharacterized protein OS=Populus jackii PE=2 SV=1 Length = 403
Score = 203 bits (516), Expect = 8e-51 Identities = 94/143 (65%), Positives = 115/143 (80%) Frame = +1
Query: 103 QFLSSLLSQRGPNALPYSEDVKLLIRQHLLNLMQELPSLRAKPASFVHNDGTSANLLQVD 282 QFLSS+LSQRGP+ALPY+ED K LIRQHL++L PSL K A+F HNDG + NLLQ D Sbjct: 13 QFLSSVLSQRGPSALPYTEDTKWLIRQHLVSLTSTFPSLEPKTATFTHNDGRTVNLLQAD 72
Query: 283 GTVPMTFHGASYNIPVIIWLLESYPKAPPRVFVSPTKDMIIKRPHKHVDASGMVSLPYLQ 462 GTVPMTF +YNIPVIIWL+ESYP+ PP V+V+PT+DM+IKR H V+ SG+V++PYLQ Sbjct: 73 GTVPMTFESVTYNIPVIIWLIESYPRHPPCVYVNPTRDMVIKRSHSFVNPSGLVAVPYLQ 132
Query: 463 SWFYPRSNLADLARALSSMFSQD 531 +W YP SNL DLAR LS +F +D Sbjct: 133 NWIYPSSNLVDLARELSMIFGRD 155
>tr|Q9FFY6|Q9FFY6_ARATH Similarity to nascent polypeptide associated complex alpha chain OS=Arabidopsis thaliana GN=At5g13860 PE=4 SV=1 Length = 368
Score = 202 bits (515), Expect = 1e-50 Identities = 97/143 (67%), Positives = 114/143 (79%) Frame = +1
Query: 103 QFLSSLLSQRGPNALPYSEDVKLLIRQHLLNLMQELPSLRAKPASFVHNDGTSANLLQVD 282 QFLSS L+QRGP+ALPY+E+ K LIRQHLLNL+ SL K A+F HNDG S LLQ D Sbjct: 13 QFLSSALTQRGPSALPYAENTKSLIRQHLLNLISSYTSLDPKTATFTHNDGRSVILLQAD 72
Query: 283 GTVPMTFHGASYNIPVIIWLLESYPKAPPRVFVSPTKDMIIKRPHKHVDASGMVSLPYLQ 462 GT+PM F G SYNIPV+IWLLESYP+ PP V+V+PT+DMIIKRPH +V SG+VSLPYLQ Sbjct: 73 GTIPMPFQGVSYNIPVVIWLLESYPQYPPCVYVNPTRDMIIKRPHSNVSPSGLVSLPYLQ 132
Query: 463 SWFYPRSNLADLARALSSMFSQD 531 +W YP SNL DLA LS+ FS+D Sbjct: 133 NWIYPSSNLVDLASHLSAAFSRD 155
>tr|A7PKJ3|A7PKJ3_VITVI Chromosome chr15 scaffold_19, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00019200001 PE=3 SV=1 Length = 504
Score = 190 bits (482), Expect = 7e-47 Identities = 83/143 (58%), Positives = 115/143 (80%) Frame = +1
Query: 103 QFLSSLLSQRGPNALPYSEDVKLLIRQHLLNLMQELPSLRAKPASFVHNDGTSANLLQVD 282 QFL+S+LS+RGP+ALPY+EDVK +IRQH L+L P+L + A++ HNDG + NLL+V+ Sbjct: 14 QFLTSVLSRRGPSALPYAEDVKWMIRQHFLSLADAFPALHPQTAAYTHNDGRTVNLLRVE 73
Query: 283 GTVPMTFHGASYNIPVIIWLLESYPKAPPRVFVSPTKDMIIKRPHKHVDASGMVSLPYLQ 462 G +PM + +Y IP+++WL+E+YP+ PP V+V+PT+ M+IKRPH HV+ SG+VSLPYLQ Sbjct: 74 GNIPMVYLQVTYYIPIVVWLMEAYPRQPPCVYVNPTRQMVIKRPHPHVNPSGLVSLPYLQ 133
Query: 463 SWFYPRSNLADLARALSSMFSQD 531 +W YP SNLADLAR LS +F +D Sbjct: 134 NWIYPTSNLADLARNLSLVFGRD 156
>tr|Q6ESB7|Q6ESB7_ORYSJ Os02g0833300 protein OS=Oryza sativa subsp. japonica GN=OJ1282_E10.10 PE=2 SV=1 Length = 402
Score = 177 bits (450), Expect = 3e-43 Identities = 85/144 (59%), Positives = 108/144 (75%), Gaps = 1/144 (0%) Frame = +1
Query: 103 QFLSSLLSQRGPNALPYSEDVKLLIRQHLLNLMQELPSLRAKPASFVHNDGTSANLLQVD 282 QFL++ LSQRGP+ALPY+EDVK LIR HL+ L PSL K A F HNDG +A+LLQ D Sbjct: 21 QFLNTALSQRGPSALPYAEDVKWLIRNHLVALADAFPSLHPKAALFTHNDGRAAHLLQAD 80
Query: 283 GTVPMTFHGASYNIPVIIWLLESYPKAPPRVFVSPTKDMIIKRPHKHVDASGMV-SLPYL 459 GT+P+ GASYN+P ++WL E YP++PP VF+SPT+DM+IK H VD SG+V + PYL Sbjct: 81 GTIPIHHAGASYNLPAVLWLPEPYPRSPPLVFLSPTRDMVIKPHHPLVDRSGLVANAPYL 140
Query: 460 QSWFYPRSNLADLARALSSMFSQD 531 +SW +P SNL DL R+LS +F D Sbjct: 141 RSWVFPSSNLVDLVRSLSHLFGLD 164
>tr|B8AFJ3|B8AFJ3_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_09582 PE=4 SV=1 Length = 487
Score = 177 bits (450), Expect = 3e-43 Identities = 85/144 (59%), Positives = 108/144 (75%), Gaps = 1/144 (0%) Frame = +1
Query: 103 QFLSSLLSQRGPNALPYSEDVKLLIRQHLLNLMQELPSLRAKPASFVHNDGTSANLLQVD 282 QFL++ LSQRGP+ALPY+EDVK LIR HL+ L PSL K A F HNDG +A+LLQ D Sbjct: 21 QFLNTALSQRGPSALPYAEDVKWLIRNHLVALADAFPSLHPKAALFTHNDGRAAHLLQAD 80
Query: 283 GTVPMTFHGASYNIPVIIWLLESYPKAPPRVFVSPTKDMIIKRPHKHVDASGMV-SLPYL 459 GT+P+ GASYN+P ++WL E YP++PP VF+SPT+DM+IK H VD SG+V + PYL Sbjct: 81 GTIPIHHAGASYNLPAVLWLPEPYPRSPPLVFLSPTRDMVIKPHHPLVDRSGLVANAPYL 140
Query: 460 QSWFYPRSNLADLARALSSMFSQD 531 +SW +P SNL DL R+LS +F D Sbjct: 141 RSWVFPSSNLVDLVRSLSHLFGLD 164
>tr|A9TJ74|A9TJ74_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_170379 PE=4 SV=1 Length = 409
Score = 174 bits (440), Expect = 5e-42 Identities = 79/142 (55%), Positives = 103/142 (72%) Frame = +1
Query: 103 QFLSSLLSQRGPNALPYSEDVKLLIRQHLLNLMQELPSLRAKPASFVHNDGTSANLLQVD 282 QFL+ LSQRGP AL Y ED K IR+HLL ++QE P L+ K A F HNDG + NLLQ + Sbjct: 15 QFLNQALSQRGPQALAYVEDEKWTIREHLLKVLQEFPGLQVKSAVFNHNDGRTLNLLQAE 74
Query: 283 GTVPMTFHGASYNIPVIIWLLESYPKAPPRVFVSPTKDMIIKRPHKHVDASGMVSLPYLQ 462 GT+PM + YNIP+ IWLLE+YP+ PP ++V PT+DM+I + H +VD SGMV+ YLQ Sbjct: 75 GTIPMFYQDVKYNIPINIWLLETYPRQPPLIYVKPTRDMVITQRHPNVDGSGMVNCQYLQ 134
Query: 463 SWFYPRSNLADLARALSSMFSQ 528 W +PRSNL +L ++LS +F Q Sbjct: 135 QWVFPRSNLVELVQSLSLLFGQ 156
>tr|A9S7R6|A9S7R6_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_182103 PE=4 SV=1 Length = 369
Score = 168 bits (425), Expect = 3e-40 Identities = 81/142 (57%), Positives = 100/142 (70%) Frame = +1
Query: 103 QFLSSLLSQRGPNALPYSEDVKLLIRQHLLNLMQELPSLRAKPASFVHNDGTSANLLQVD 282 QFL+ LSQRGP AL Y ED K IR+HLL ++QE P L+ K A F HNDG NLLQ + Sbjct: 15 QFLNQALSQRGPQALAYVEDDKWTIREHLLKVLQEFPGLQVKTAVFNHNDGRILNLLQAE 74
Query: 283 GTVPMTFHGASYNIPVIIWLLESYPKAPPRVFVSPTKDMIIKRPHKHVDASGMVSLPYLQ 462 GT+PM + YNIPV +WLLE+YP+ P VFV+PT+DMII H +VD SGMV+ LQ Sbjct: 75 GTIPMFYQDVKYNIPVTLWLLETYPRQAPLVFVNPTRDMIITPRHPNVDGSGMVNSISLQ 134
Query: 463 SWFYPRSNLADLARALSSMFSQ 528 W YPRSNL +L ++LS +F Q Sbjct: 135 QWIYPRSNLVELVQSLSLLFGQ 156
>tr|A8IU80|A8IU80_CHLRE Subunit of the ESCRT-I complex OS=Chlamydomonas reinhardtii GN=VPS23 PE=4 SV=1 Length = 454
Score = 141 bits (355), Expect = 4e-32 Identities = 69/144 (47%), Positives = 98/144 (68%) Frame = +1
Query: 100 MQFLSSLLSQRGPNALPYSEDVKLLIRQHLLNLMQELPSLRAKPASFVHNDGTSANLLQV 279 + +L+S+LSQRGP A+PY E VK +R H+ L Q P+L AK + + NDG N+L+V Sbjct: 6 LDYLTSVLSQRGPTAVPYDEAVKWNVRDHVSEL-QVFPTLTAKLSEYHSNDGRLLNVLKV 64
Query: 280 DGTVPMTFHGASYNIPVIIWLLESYPKAPPRVFVSPTKDMIIKRPHKHVDASGMVSLPYL 459 +GT+P+ + GA YNIP+++WL E YP PP+VFV PT +MII RP V+ SG V+ P L Sbjct: 65 EGTMPIHYQGAKYNIPILMWLAERYPYNPPQVFVVPTANMII-RPSAFVNPSGQVATPLL 123
Query: 460 QSWFYPRSNLADLARALSSMFSQD 531 +SW +P SNL D+ +S +F + Sbjct: 124 RSWLFPSSNLVDVVLEMSQVFGNE 147
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