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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK955095
Clone id TST39A01NGRL0022_C24
Library
Length 600
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0022_C24. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
GAGAGAGAAAGAAGGGATTTTGGAGAGAGAGAGAGAGAGGCAGGTAGAAAGTTCGAGCAG
AGAGACACGTTAGATTAGTTTGCTCGCAGGTGAAAGATCGAGGAAAGTTAGTTGGCCAGC
TCGCTTCTGTGCATAGCTATGGCGGCAGCTGTAGCAAGCTCCTCTTCTGTCTCCTCTCTG
CACAGTGCCGCCCTGTGCCCGTCCTCCTCATCAGCAGCTTCTTCCTTGAAGTCCTGCCCC
TCTCTCTCCTTCGCCCCCTCCAATGGCTCTCGCCTTGTTTGCATGGCCACTAAGAAGGTC
TCTTCTCGGCCCTCCTCCGGCAAGAAGTCGTGGCTTCCCGGGGTTAGGGGAGGTGGCAAC
CTTGTGGATCCTGAATGGCTTGATGGATCGCTTCCCGGCGACTATGGCTTTGATCCCCTT
GGACTTGGAAAGGATCCAGCTGCCTTGAAATGGTACCGTGAGGCTGAAATCATCCATGGA
AGATGGGGCAATGGCAGCTGTGGTGGGAATCTTTGTGGGGCAAGCATGGAGTGGAGTCCC
CTGGTTCGAAGCTGGAGCTCAACCTGGAGCAGTTGCTCCCTTCTCTTTCGGAACGCTGCT
■■Homology search results ■■ -
sp_hit_id P36494
Definition sp|P36494|CB4_SPIOL Chlorophyll a-b binding protein CP24, chloroplastic OS=Spinacia oleracea
Align length 63
Score (bit) 115.0
E-value 3.0e-41
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK955095|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0022_C24, 5'
         (585 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P36494|CB4_SPIOL Chlorophyll a-b binding protein CP24, chloro...   115   3e-41
sp|P27524|CB4A_SOLLC Chlorophyll a-b binding protein CP24 10A, c...   123   6e-28
sp|P27525|CB4B_SOLLC Chlorophyll a-b binding protein CP24 10B, c...   117   4e-26
sp|P13869|CB12_PETHY Chlorophyll a-b binding protein, chloroplas...    79   2e-14
sp|P10708|CB12_SOLLC Chlorophyll a-b binding protein 7, chloropl...    71   5e-12
sp|P27521|CB24_ARATH Chlorophyll a-b binding protein 4, chloropl...    70   1e-11
sp|Q9SQL2|CB24_PEA Chlorophyll a-b binding protein P4, chloropla...    69   2e-11
sp|Q36718|CB120_HORVU Chlorophyll a-b binding protein 1B-20, chl...    66   1e-10
sp|Q93WD2|CB29_CHLRE Chlorophyll a-b binding protein CP29 OS=Chl...    53   3e-09
sp|P12360|CB11_SOLLC Chlorophyll a-b binding protein 6A, chlorop...    61   5e-09
sp|Q9XF88|CB4B_ARATH Chlorophyll a-b binding protein CP29.2, chl...    53   1e-07
sp|P22686|CB2_CHLMO Chlorophyll a-b binding protein of LHCII typ...    54   4e-07
sp|P27517|CB2_DUNTE Chlorophyll a-b binding protein of LHCII typ...    54   6e-07
sp|P14273|CB2_CHLRE Chlorophyll a-b binding protein of LHCII typ...    54   6e-07
sp|Q9XF89|CB26_ARATH Chlorophyll a-b binding protein CP26, chlor...    54   8e-07
sp|Q07473|CB4A_ARATH Chlorophyll a-b binding protein CP29.1, chl...    53   1e-06
sp|P20865|CB2_DUNSA Chlorophyll a-b binding protein of LHCII typ...    52   2e-06
sp|P08963|CB22_HORVU Chlorophyll a-b binding protein 2, chloropl...    52   3e-06
sp|Q9SDM1|CB121_HORVU Chlorophyll a-b binding protein 1B-21, chl...    52   3e-06
sp|P27489|CB23_SOLLC Chlorophyll a-b binding protein 13, chlorop...    51   4e-06
sp|P27523|CB23_HORVU Chlorophyll a-b binding protein of LHCII ty...    51   4e-06
sp|P07369|CB2G_SOLLC Chlorophyll a-b binding protein 3C, chlorop...    51   5e-06
sp|P04159|CB21_PEA Chlorophyll a-b binding protein AB96 (Fragmen...    50   8e-06
sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 memb...    50   1e-05
sp|P12469|CB23_NICPL Chlorophyll a-b binding protein C, chloropl...    50   1e-05
sp|P12331|CB22_ORYSJ Chlorophyll a-b binding protein 2, chloropl...    50   1e-05
sp|P27490|CB28_PEA Chlorophyll a-b binding protein 8, chloroplas...    49   1e-05
sp|P27496|CB25_TOBAC Chlorophyll a-b binding protein 50, chlorop...    49   1e-05
sp|P07371|CB22_PEA Chlorophyll a-b binding protein AB80, chlorop...    49   1e-05
sp|P12471|CB21_SOYBN Chlorophyll a-b binding protein, chloroplas...    49   1e-05

>sp|P36494|CB4_SPIOL Chlorophyll a-b binding protein CP24,
           chloroplastic OS=Spinacia oleracea PE=2 SV=1
          Length = 261

 Score =  115 bits (288), Expect(2) = 3e-41
 Identities = 48/63 (76%), Positives = 56/63 (88%)
 Frame = +1

Query: 283 VSSRPSSGKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAALKWYREAEIIH 462
           V +  ++ KKSW+P V+GGGN +DPEWLDGSLPGD+GFDPLGLGKDPA LKWYREAE+IH
Sbjct: 49  VVAAAAAPKKSWIPAVKGGGNFLDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIH 108

Query: 463 GRW 471
           GRW
Sbjct: 109 GRW 111



 Score = 73.6 bits (179), Expect(2) = 3e-41
 Identities = 32/37 (86%), Positives = 35/37 (94%)
 Frame = +2

Query: 473 AMAAVVGIFVGQAWSGVPWFEAGAQPGAVAPFSFGTL 583
           AM AV+GIFVGQAW+G+PWFEAGA PGAVAPFSFGTL
Sbjct: 112 AMLAVLGIFVGQAWTGIPWFEAGADPGAVAPFSFGTL 148


>sp|P27524|CB4A_SOLLC Chlorophyll a-b binding protein CP24 10A,
           chloroplastic OS=Solanum lycopersicum GN=CAP10A PE=3
           SV=1
          Length = 256

 Score =  123 bits (309), Expect = 6e-28
 Identities = 56/82 (68%), Positives = 64/82 (78%)
 Frame = +1

Query: 277 KKVSSRPSSGKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAALKWYREAEI 456
           K+ +   ++ KKSW+P VRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPA LKWYREAE+
Sbjct: 42  KRFTVLAAAAKKSWIPAVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAEL 101

Query: 457 IHGRWGNGSCGGNLCGASMEWS 522
           IHGRW   +  G   G +  WS
Sbjct: 102 IHGRWAMAAVLGIFVGQA--WS 121



 Score = 76.3 bits (186), Expect = 1e-13
 Identities = 33/37 (89%), Positives = 36/37 (97%)
 Frame = +2

Query: 473 AMAAVVGIFVGQAWSGVPWFEAGAQPGAVAPFSFGTL 583
           AMAAV+GIFVGQAWSG+PWFEAGA PGA+APFSFGTL
Sbjct: 107 AMAAVLGIFVGQAWSGIPWFEAGADPGAIAPFSFGTL 143


>sp|P27525|CB4B_SOLLC Chlorophyll a-b binding protein CP24 10B,
           chloroplastic OS=Solanum lycopersicum GN=CAP10B PE=3
           SV=1
          Length = 256

 Score =  117 bits (293), Expect = 4e-26
 Identities = 53/80 (66%), Positives = 62/80 (77%)
 Frame = +1

Query: 283 VSSRPSSGKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAALKWYREAEIIH 462
           V++   + KKSW+P V+ GGNLVDPEWLDGSLPGD+GFDPLGLGKDPA LKWYREAE+IH
Sbjct: 44  VAAAAVAPKKSWIPAVKSGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIH 103

Query: 463 GRWGNGSCGGNLCGASMEWS 522
           GRW   +  G   G +  WS
Sbjct: 104 GRWAMAAVLGIFVGQA--WS 121



 Score = 74.7 bits (182), Expect = 3e-13
 Identities = 32/37 (86%), Positives = 36/37 (97%)
 Frame = +2

Query: 473 AMAAVVGIFVGQAWSGVPWFEAGAQPGAVAPFSFGTL 583
           AMAAV+GIFVGQAWSG+PWFEAGA PGA+APFSFG+L
Sbjct: 107 AMAAVLGIFVGQAWSGIPWFEAGADPGAIAPFSFGSL 143


>sp|P13869|CB12_PETHY Chlorophyll a-b binding protein, chloroplastic
           OS=Petunia hybrida PE=2 SV=1
          Length = 270

 Score = 78.6 bits (192), Expect = 2e-14
 Identities = 39/74 (52%), Positives = 47/74 (63%)
 Frame = +1

Query: 250 GSRLVCMATKKVSSRPSSGKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAA 429
           GSR V  A   V++ P   +  W PG         PEWLDGSLPGD+GFDPLGLG DP +
Sbjct: 50  GSRSV--AVSAVAADPD--RPLWFPGS------TPPEWLDGSLPGDFGFDPLGLGSDPES 99

Query: 430 LKWYREAEIIHGRW 471
           LKW  +AE++H RW
Sbjct: 100 LKWNAQAELVHSRW 113



 Score = 30.0 bits (66), Expect = 8.9
 Identities = 17/35 (48%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
 Frame = +1

Query: 367 DGSLPGDYGFDPLGLGK-DPAALKWYREAEIIHGR 468
           D   PG   FDPLG G   PA +K  R  EI +GR
Sbjct: 193 DVGYPGGLWFDPLGWGSGSPAKIKELRTKEIKNGR 227


>sp|P10708|CB12_SOLLC Chlorophyll a-b binding protein 7,
           chloroplastic OS=Solanum lycopersicum GN=CAB7 PE=3 SV=1
          Length = 270

 Score = 70.9 bits (172), Expect = 5e-12
 Identities = 29/52 (55%), Positives = 36/52 (69%)
 Frame = +1

Query: 316 WLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAALKWYREAEIIHGRW 471
           W PG         P WLDGSLPGD+GFDPLGL  DP +L+W ++AE++H RW
Sbjct: 68  WFPGS------TPPPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRW 113



 Score = 30.0 bits (66), Expect = 8.9
 Identities = 17/35 (48%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
 Frame = +1

Query: 367 DGSLPGDYGFDPLGLGK-DPAALKWYREAEIIHGR 468
           D   PG   FDPLG G   PA +K  R  EI +GR
Sbjct: 193 DVGYPGGLWFDPLGWGSGSPAKIKELRTKEIKNGR 227


>sp|P27521|CB24_ARATH Chlorophyll a-b binding protein 4,
           chloroplastic OS=Arabidopsis thaliana GN=CAB4 PE=1 SV=1
          Length = 251

 Score = 69.7 bits (169), Expect = 1e-11
 Identities = 34/76 (44%), Positives = 45/76 (59%)
 Frame = +1

Query: 271 ATKKVSSRPSSGKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAALKWYREA 450
           + K  S +  + K  WLPG      L  P++L GSL GD GFDPLGL +DP  LKW+ +A
Sbjct: 42  SAKTSSFKVEAKKGEWLPG------LASPDYLTGSLAGDNGFDPLGLAEDPENLKWFVQA 95

Query: 451 EIIHGRWGNGSCGGNL 498
           E+++GRW      G L
Sbjct: 96  ELVNGRWAMLGVAGML 111


>sp|Q9SQL2|CB24_PEA Chlorophyll a-b binding protein P4,
           chloroplastic OS=Pisum sativum GN=lhcA-P4 PE=1 SV=1
          Length = 252

 Score = 68.9 bits (167), Expect = 2e-11
 Identities = 33/71 (46%), Positives = 43/71 (60%)
 Frame = +1

Query: 286 SSRPSSGKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAALKWYREAEIIHG 465
           S +  + K  WLPG      L  P +L GSLPGD GFDPLGL +DP  L+W+ +AE+++G
Sbjct: 46  SFKVEAKKGEWLPG------LASPGYLTGSLPGDNGFDPLGLAEDPENLRWFVQAELVNG 99

Query: 466 RWGNGSCGGNL 498
           RW      G L
Sbjct: 100 RWAMLGVAGML 110


>sp|Q36718|CB120_HORVU Chlorophyll a-b binding protein 1B-20,
           chloroplastic (Fragment) OS=Hordeum vulgare GN=LHC Ib-20
           PE=1 SV=1
          Length = 231

 Score = 66.2 bits (160), Expect = 1e-10
 Identities = 30/64 (46%), Positives = 41/64 (64%)
 Frame = +1

Query: 307 KKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAALKWYREAEIIHGRWGNGSC 486
           K SWLPG++       P +LDGSL GD GFDPL L +DP  L+W+ +A++++GRW     
Sbjct: 33  KGSWLPGLQS------PAYLDGSLEGDNGFDPLALAEDPEDLRWFVQADVVNGRWAMLGV 86

Query: 487 GGNL 498
            G L
Sbjct: 87  AGML 90


>sp|Q93WD2|CB29_CHLRE Chlorophyll a-b binding protein CP29
           OS=Chlamydomonas reinhardtii GN=Lhcb4 PE=1 SV=3
          Length = 280

 Score = 53.1 bits (126), Expect(2) = 3e-09
 Identities = 38/117 (32%), Positives = 42/117 (35%), Gaps = 45/117 (38%)
 Frame = +1

Query: 283 VSSRPSSGKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGK--------------- 417
           V  R   G   WLP      N   PEWLDGSLPGD GFDPLGL K               
Sbjct: 42  VGYRKYQGDALWLP------NTTRPEWLDGSLPGDRGFDPLGLSKPSEFVVIGVDENDQN 95

Query: 418 ------------------------------DPAALKWYREAEIIHGRWGNGSCGGNL 498
                                         +   L  +RE E+IHGRW   +C G L
Sbjct: 96  AAKNNKGSVEAIVQATPDEVSSENRLAPYSEVFGLARFRECELIHGRWAMLACLGAL 152



 Score = 28.1 bits (61), Expect(2) = 3e-09
 Identities = 17/44 (38%), Positives = 21/44 (47%), Gaps = 7/44 (15%)
 Frame = +2

Query: 473 AMAAVVGIFVGQAWSGVPWFEAG-------AQPGAVAPFSFGTL 583
           AM A +G  V +A +GV W EAG       +  G   PFS   L
Sbjct: 144 AMLACLGALVAEATTGVSWVEAGKVELDGASYAGLSLPFSITQL 187


>sp|P12360|CB11_SOLLC Chlorophyll a-b binding protein 6A,
           chloroplastic OS=Solanum lycopersicum GN=CAB6A PE=2 SV=1
          Length = 246

 Score = 60.8 bits (146), Expect = 5e-09
 Identities = 28/52 (53%), Positives = 36/52 (69%)
 Frame = +1

Query: 316 WLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAALKWYREAEIIHGRW 471
           W+PG         P +LDGS PGD+GFD LGLG+ PA L+ Y+E+E+IH RW
Sbjct: 49  WMPGQPR------PSYLDGSAPGDFGFDSLGLGEVPANLERYKESELIHCRW 94
tr_hit_id B3VV80
Definition tr|B3VV80|B3VV80_POPTN Chloroplast light-harvesting complex II protein (Fragment) OS=Populus tremula
Align length 55
Score (bit) 115.0
E-value 3.0e-40
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK955095|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0022_C24, 5'
         (585 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B3VV80|B3VV80_POPTN Chloroplast light-harvesting complex II p...   115   3e-40
tr|B3VV82|B3VV82_POPTN Chloroplast light-harvesting complex II p...   114   7e-39
tr|A9RU32|A9RU32_PHYPA Predicted protein OS=Physcomitrella paten...   136   1e-30
tr|Q9XQB6|Q9XQB6_PHAAU Chlorophyll a/b-binding protein CP24 OS=P...   122   1e-26
tr|A5ASW8|A5ASW8_VITVI Putative uncharacterized protein (Chromos...   122   2e-26
tr|Q0PWS6|Q0PWS6_TOBAC Chloroplast pigment-binding protein CP24 ...   121   3e-26
tr|Q9XF90|Q9XF90_ARATH Lhcb6 protein OS=Arabidopsis thaliana GN=...   119   1e-25
tr|Q9LMQ2|Q9LMQ2_ARATH F7H2.16 protein (Chlorophyll A-B binding ...   119   1e-25
tr|A9PFP4|A9PFP4_POPTR Putative uncharacterized protein OS=Popul...   119   2e-25
tr|Q6DV17|Q6DV17_BRARP Lhcb6 protein (Fragment) OS=Brassica rapa...   117   4e-25
tr|B3VV93|B3VV93_POPTN Chloroplast light-harvesting complex II p...   117   4e-25
tr|B3VV83|B3VV83_POPTN Chloroplast light-harvesting complex II p...   117   4e-25
tr|B3VV74|B3VV74_POPTN Chloroplast light-harvesting complex II p...   117   4e-25
tr|B3VV72|B3VV72_POPTN Chloroplast light-harvesting complex II p...   117   4e-25
tr|A9PK00|A9PK00_POPJC Putative uncharacterized protein OS=Popul...   117   4e-25
tr|A9PGD4|A9PGD4_POPTR Putative uncharacterized protein OS=Popul...   117   4e-25
tr|B3VV73|B3VV73_POPTN Chloroplast light-harvesting complex II p...   116   8e-25
tr|B3VV84|B3VV84_POPTN Chloroplast light-harvesting complex II p...   116   1e-24
tr|B8PYF9|B8PYF9_9POAL Chloroplast a/b binding protein cab-PhE11...   105   1e-21
tr|B6T037|B6T037_MAIZE Chlorophyll a-b binding protein CP24 OS=Z...   105   2e-21
tr|Q41748|Q41748_MAIZE Chlorophyll a/b-binding apoprotein CP24 O...   104   3e-21
tr|Q7XV11|Q7XV11_ORYSJ Os04g0457000 protein OS=Oryza sativa subs...   103   9e-21
tr|Q01JQ3|Q01JQ3_ORYSA H0523F07.10 protein OS=Oryza sativa GN=H0...   103   9e-21
tr|A2XU61|A2XU61_ORYSI Putative uncharacterized protein OS=Oryza...   103   9e-21
tr|B4FXB0|B4FXB0_MAIZE Chlorophyll a-b binding protein CP24 OS=Z...   102   2e-20
tr|Q7M1K7|Q7M1K7_HORVU Chlorophyll a/b-binding protein CP24, pho...    89   1e-16
tr|A9PJQ2|A9PJQ2_POPJC Putative uncharacterized protein OS=Popul...    83   1e-14
tr|A9TJ06|A9TJ06_PHYPA Predicted protein OS=Physcomitrella paten...    80   8e-14
tr|Q9LMB1|Q9LMB1_ARATH T29M8.2 protein OS=Arabidopsis thaliana G...    79   2e-13
tr|Q8LCQ4|Q8LCQ4_ARATH PSI type II chlorophyll a/b-binding prote...    79   2e-13

>tr|B3VV80|B3VV80_POPTN Chloroplast light-harvesting complex II
           protein (Fragment) OS=Populus tremula PE=4 SV=1
          Length = 174

 Score =  115 bits (289), Expect(2) = 3e-40
 Identities = 48/55 (87%), Positives = 52/55 (94%)
 Frame = +1

Query: 307 KKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAALKWYREAEIIHGRW 471
           KKSW+P V+GGG+ VDPEWLDGSLPGDYGFDPLGLGKDPA LKWYREAE+IHGRW
Sbjct: 19  KKSWIPAVKGGGSFVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRW 73



 Score = 73.6 bits (179), Expect(2) = 3e-40
 Identities = 32/37 (86%), Positives = 35/37 (94%)
 Frame = +2

Query: 473 AMAAVVGIFVGQAWSGVPWFEAGAQPGAVAPFSFGTL 583
           AMAAVV IFVGQAWSG+PWFEAGA PGA+APFSFG+L
Sbjct: 74  AMAAVVSIFVGQAWSGIPWFEAGADPGAIAPFSFGSL 110


>tr|B3VV82|B3VV82_POPTN Chloroplast light-harvesting complex II
           protein (Fragment) OS=Populus tremula PE=4 SV=1
          Length = 174

 Score =  114 bits (286), Expect(2) = 7e-39
 Identities = 53/74 (71%), Positives = 58/74 (78%)
 Frame = +1

Query: 250 GSRLVCMATKKVSSRPSSGKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAA 429
           GSR V  A K      +  KKSW+P V+GGG+ VDPEWLDGSLPGDYGFDPLGLGKDP  
Sbjct: 1   GSRSVG-ARKLTIVAAAQPKKSWIPAVKGGGSFVDPEWLDGSLPGDYGFDPLGLGKDPTF 59

Query: 430 LKWYREAEIIHGRW 471
           LKWYREAE+IHGRW
Sbjct: 60  LKWYREAELIHGRW 73



 Score = 70.1 bits (170), Expect(2) = 7e-39
 Identities = 31/37 (83%), Positives = 34/37 (91%)
 Frame = +2

Query: 473 AMAAVVGIFVGQAWSGVPWFEAGAQPGAVAPFSFGTL 583
           AMAAVV IFVGQAWSG+PWFEA A PGA+APFSFG+L
Sbjct: 74  AMAAVVSIFVGQAWSGIPWFEACADPGAIAPFSFGSL 110


>tr|A9RU32|A9RU32_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_119427 PE=4 SV=1
          Length = 219

 Score =  136 bits (342), Expect = 1e-30
 Identities = 63/86 (73%), Positives = 71/86 (82%), Gaps = 1/86 (1%)
 Frame = +1

Query: 268 MATKKVSSRPSSG-KKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAALKWYR 444
           MATKKVS+RP++G KKSW+P V+GGGNL DPEWLDGSLPGDYGFDPLGLG+DPAALKWYR
Sbjct: 1   MATKKVSARPAAGGKKSWIPAVKGGGNLTDPEWLDGSLPGDYGFDPLGLGRDPAALKWYR 60

Query: 445 EAEIIHGRWGNGSCGGNLCGASMEWS 522
           EAE+IHGRW   +  G   G    WS
Sbjct: 61  EAELIHGRWAMAAVVGIFVGQG--WS 84



 Score = 71.6 bits (174), Expect = 3e-11
 Identities = 32/37 (86%), Positives = 34/37 (91%)
 Frame = +2

Query: 473 AMAAVVGIFVGQAWSGVPWFEAGAQPGAVAPFSFGTL 583
           AMAAVVGIFVGQ WSGVPWFEAGA P A+APFSFG+L
Sbjct: 70  AMAAVVGIFVGQGWSGVPWFEAGADPAALAPFSFGSL 106


>tr|Q9XQB6|Q9XQB6_PHAAU Chlorophyll a/b-binding protein CP24
           OS=Phaseolus aureus GN=CipCp24 PE=2 SV=2
          Length = 258

 Score =  122 bits (307), Expect = 1e-26
 Identities = 55/72 (76%), Positives = 60/72 (83%)
 Frame = +1

Query: 307 KKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAALKWYREAEIIHGRWGNGSC 486
           KKSW+PGVRGGGNLVDPEWLDGSLPGD+GFDPLGLGKDPA LKWYREAE+IHGRW   + 
Sbjct: 54  KKSWIPGVRGGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAV 113

Query: 487 GGNLCGASMEWS 522
            G   G +  WS
Sbjct: 114 LGIFVGQA--WS 123



 Score = 72.8 bits (177), Expect = 1e-11
 Identities = 32/37 (86%), Positives = 35/37 (94%)
 Frame = +2

Query: 473 AMAAVVGIFVGQAWSGVPWFEAGAQPGAVAPFSFGTL 583
           AMAAV+GIFVGQAWSGVPWFEAGA P A+APFSFG+L
Sbjct: 109 AMAAVLGIFVGQAWSGVPWFEAGADPNAIAPFSFGSL 145


>tr|A5ASW8|A5ASW8_VITVI Putative uncharacterized protein (Chromosome
           chr12 scaffold_238, whole genome shotgun sequence)
           OS=Vitis vinifera GN=GSVIVT00009554001 PE=4 SV=1
          Length = 257

 Score =  122 bits (305), Expect = 2e-26
 Identities = 55/72 (76%), Positives = 59/72 (81%)
 Frame = +1

Query: 307 KKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAALKWYREAEIIHGRWGNGSC 486
           KKSWLPGV+ GGNLVDPEWLDGSLPGDYGFDPLGLGKDPA LKWYREAE+IHGRW   + 
Sbjct: 53  KKSWLPGVKAGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAV 112

Query: 487 GGNLCGASMEWS 522
            G   G +  WS
Sbjct: 113 VGIFVGQA--WS 122



 Score = 77.4 bits (189), Expect = 5e-13
 Identities = 35/37 (94%), Positives = 36/37 (97%)
 Frame = +2

Query: 473 AMAAVVGIFVGQAWSGVPWFEAGAQPGAVAPFSFGTL 583
           AMAAVVGIFVGQAWSG+PWFEAGA PGAVAPFSFGTL
Sbjct: 108 AMAAVVGIFVGQAWSGIPWFEAGAAPGAVAPFSFGTL 144


>tr|Q0PWS6|Q0PWS6_TOBAC Chloroplast pigment-binding protein CP24
           OS=Nicotiana tabacum GN=Lhcb6 PE=2 SV=1
          Length = 257

 Score =  121 bits (303), Expect = 3e-26
 Identities = 57/92 (61%), Positives = 70/92 (76%), Gaps = 2/92 (2%)
 Frame = +1

Query: 253 SRLVCMATKK--VSSRPSSGKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPA 426
           +R+  +AT K  + +  ++ KKSW+P V+GGGNL+DPEWLDGSLPGDYGFDPLGLGKDPA
Sbjct: 33  ARIGGLATPKRCIVAAAAAPKKSWIPAVKGGGNLLDPEWLDGSLPGDYGFDPLGLGKDPA 92

Query: 427 ALKWYREAEIIHGRWGNGSCGGNLCGASMEWS 522
            LKWYREAE+IHGRW   +  G   G +  WS
Sbjct: 93  FLKWYREAELIHGRWAMAAVLGIFVGQA--WS 122



 Score = 74.7 bits (182), Expect = 4e-12
 Identities = 32/37 (86%), Positives = 36/37 (97%)
 Frame = +2

Query: 473 AMAAVVGIFVGQAWSGVPWFEAGAQPGAVAPFSFGTL 583
           AMAAV+GIFVGQAWSG+PWFEAGA PGA+APFSFG+L
Sbjct: 108 AMAAVLGIFVGQAWSGIPWFEAGADPGAIAPFSFGSL 144


>tr|Q9XF90|Q9XF90_ARATH Lhcb6 protein OS=Arabidopsis thaliana
           GN=Lhcb6 PE=2 SV=1
          Length = 258

 Score =  119 bits (299), Expect = 1e-25
 Identities = 55/91 (60%), Positives = 67/91 (73%)
 Frame = +1

Query: 250 GSRLVCMATKKVSSRPSSGKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAA 429
           G++ V   T  V++  +  KKSW+P V+GGGN +DPEWLDGSLPGD+GFDPLGLGKDPA 
Sbjct: 35  GAQRVGRKTLIVAAAAAQPKKSWIPAVKGGGNFLDPEWLDGSLPGDFGFDPLGLGKDPAF 94

Query: 430 LKWYREAEIIHGRWGNGSCGGNLCGASMEWS 522
           LKWYREAE+IHGRW   +  G   G +  WS
Sbjct: 95  LKWYREAELIHGRWAMAAVLGIFVGQA--WS 123



 Score = 71.2 bits (173), Expect = 4e-11
 Identities = 32/37 (86%), Positives = 35/37 (94%)
 Frame = +2

Query: 473 AMAAVVGIFVGQAWSGVPWFEAGAQPGAVAPFSFGTL 583
           AMAAV+GIFVGQAWSGV WFEAGAQP A+APFSFG+L
Sbjct: 109 AMAAVLGIFVGQAWSGVAWFEAGAQPDAIAPFSFGSL 145


>tr|Q9LMQ2|Q9LMQ2_ARATH F7H2.16 protein (Chlorophyll A-B binding
           protein) (Lhcb6 protein) (Putative chlorophyll binding
           protein) OS=Arabidopsis thaliana GN=At1g15820/F7H2.16
           PE=2 SV=1
          Length = 258

 Score =  119 bits (299), Expect = 1e-25
 Identities = 55/91 (60%), Positives = 67/91 (73%)
 Frame = +1

Query: 250 GSRLVCMATKKVSSRPSSGKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAA 429
           G++ V   T  V++  +  KKSW+P V+GGGN +DPEWLDGSLPGD+GFDPLGLGKDPA 
Sbjct: 35  GAQRVGRKTLIVAAAAAQPKKSWIPAVKGGGNFLDPEWLDGSLPGDFGFDPLGLGKDPAF 94

Query: 430 LKWYREAEIIHGRWGNGSCGGNLCGASMEWS 522
           LKWYREAE+IHGRW   +  G   G +  WS
Sbjct: 95  LKWYREAELIHGRWAMAAVLGIFVGQA--WS 123



 Score = 71.2 bits (173), Expect = 4e-11
 Identities = 32/37 (86%), Positives = 35/37 (94%)
 Frame = +2

Query: 473 AMAAVVGIFVGQAWSGVPWFEAGAQPGAVAPFSFGTL 583
           AMAAV+GIFVGQAWSGV WFEAGAQP A+APFSFG+L
Sbjct: 109 AMAAVLGIFVGQAWSGVAWFEAGAQPDAIAPFSFGSL 145


>tr|A9PFP4|A9PFP4_POPTR Putative uncharacterized protein OS=Populus
           trichocarpa PE=2 SV=1
          Length = 257

 Score =  119 bits (297), Expect = 2e-25
 Identities = 53/72 (73%), Positives = 59/72 (81%)
 Frame = +1

Query: 307 KKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAALKWYREAEIIHGRWGNGSC 486
           KKSW+P V+GGG+LVDPEWLDGSLPGDYGFDPLGLGKDPA LKWYREAE+IHGRW   + 
Sbjct: 53  KKSWIPAVKGGGSLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAV 112

Query: 487 GGNLCGASMEWS 522
            G   G +  WS
Sbjct: 113 LGIFVGQA--WS 122



 Score = 74.7 bits (182), Expect = 4e-12
 Identities = 32/37 (86%), Positives = 36/37 (97%)
 Frame = +2

Query: 473 AMAAVVGIFVGQAWSGVPWFEAGAQPGAVAPFSFGTL 583
           AMAAV+GIFVGQAWSG+PWFEAGA PGA+APFSFG+L
Sbjct: 108 AMAAVLGIFVGQAWSGIPWFEAGADPGAIAPFSFGSL 144


>tr|Q6DV17|Q6DV17_BRARP Lhcb6 protein (Fragment) OS=Brassica rapa
           subsp. pekinensis PE=2 SV=1
          Length = 254

 Score =  117 bits (294), Expect = 4e-25
 Identities = 52/80 (65%), Positives = 62/80 (77%)
 Frame = +1

Query: 283 VSSRPSSGKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAALKWYREAEIIH 462
           V++  +  KKSW+P V+GGGN +DPEWLDGSLPGD+GFDPLGLGKDPA LKWYREAE+IH
Sbjct: 42  VAAAAAQPKKSWIPAVKGGGNFLDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIH 101

Query: 463 GRWGNGSCGGNLCGASMEWS 522
           GRW   +  G   G +  WS
Sbjct: 102 GRWAMAAVLGIFVGQA--WS 119



 Score = 72.0 bits (175), Expect = 2e-11
 Identities = 32/37 (86%), Positives = 35/37 (94%)
 Frame = +2

Query: 473 AMAAVVGIFVGQAWSGVPWFEAGAQPGAVAPFSFGTL 583
           AMAAV+GIFVGQAWSGVPWFEAGA P A+APFSFG+L
Sbjct: 105 AMAAVLGIFVGQAWSGVPWFEAGADPRAIAPFSFGSL 141