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NBDC - LSDB Archive
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DK955111
Clone id TST39A01NGRL0022_D16
Library
Length 600
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0022_D16. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
CTCTGCTACATTGCAAGTGACTGTGAGGGAGGGTGAGCCTTTGATATGGCAACAATGGCG
GCTGCAGCGCTTTCTTCAAGCACCTTCGCCGGCCAGGCTGTGTATAAGCCCCAGAGCGAG
CTGAGCTCTAAGGTAGGCAATGTGGGCGAGGCCCGCGTGTCCATGAGGAAAACAGTGTCA
AAGAGCTCCGACAGCCCCTGGTATGGCCCCGACCGCGTGAAGTACCTTGGCCCTTTCTCC
GGCGAGGCCCCCAGCTATCTCAAGGGAGAATTTCCCGGCGACTACGGCTGGGACACCGCC
GGCCTGTCTGCCGACCCTGAGACCTTCGCCAAGAACCGGGAGCTGGAGGTGATTCACGCA
CGGTGGGCTATGTTGGGAGCCCTGGGCTGCGTGACCCCCGAGCTGCTGGCCAAGAATGGT
GTGAAGTTTGGCGAGGCCGTGTGGTTCAAGGCTGGCTCGCAGATCTTTGCTGAGGGTGGG
CTTGACTACTTGGGCAACCCCAGCCTCGTCCACGCTCAGAGCATTCTGGCCATCTGGGCA
TGTCAGGTAATTCTCATGGGCGCTGTTGAGGGATACAGAGTGGCAGGTGGGCCCCTGGGC
■■Homology search results ■■ -
sp_hit_id P12329
Definition sp|P12329|CB21_MAIZE Chlorophyll a-b binding protein 1, chloroplastic OS=Zea mays
Align length 161
Score (bit) 296.0
E-value 7.0e-80
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK955111|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0022_D16, 5'
         (600 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P12329|CB21_MAIZE Chlorophyll a-b binding protein 1, chloropl...   296   7e-80
sp|P20866|CB2_PHYPA Chlorophyll a-b binding protein, chloroplast...   295   2e-79
sp|P27493|CB22_TOBAC Chlorophyll a-b binding protein 21, chlorop...   294   3e-79
sp|P12332|CB21_SILPR Chlorophyll a-b binding protein, chloroplas...   294   3e-79
sp|P12333|CB2A_SPIOL Chlorophyll a-b binding protein, chloroplas...   292   1e-78
sp|P07370|CB2B_SOLLC Chlorophyll a-b binding protein 1B, chlorop...   291   1e-78
sp|P27496|CB25_TOBAC Chlorophyll a-b binding protein 50, chlorop...   291   2e-78
sp|P14278|CB24_SOLLC Chlorophyll a-b binding protein 4, chloropl...   291   2e-78
sp|P27492|CB21_TOBAC Chlorophyll a-b binding protein 16, chlorop...   291   2e-78
sp|P27495|CB24_TOBAC Chlorophyll a-b binding protein 40, chlorop...   291   2e-78
sp|P07369|CB2G_SOLLC Chlorophyll a-b binding protein 3C, chlorop...   290   3e-78
sp|P04782|CB24_PETSP Chlorophyll a-b binding protein 25, chlorop...   290   3e-78
sp|P92919|CB23_APIGR Chlorophyll a-b binding protein, chloroplas...   290   5e-78
sp|P27491|CB27_TOBAC Chlorophyll a-b binding protein 7, chloropl...   289   7e-78
sp|P08963|CB22_HORVU Chlorophyll a-b binding protein 2, chloropl...   289   7e-78
sp|P27518|CB21_GOSHI Chlorophyll a-b binding protein 151, chloro...   289   7e-78
sp|P08221|CB21_CUCSA Chlorophyll a-b binding protein of LHCII ty...   289   7e-78
sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 memb...   289   9e-78
sp|P27497|CB29_MAIZE Chlorophyll a-b binding protein M9, chlorop...   288   1e-77
sp|P04781|CB23_PETSP Chlorophyll a-b binding protein 22R, chloro...   288   1e-77
sp|P04783|CB25_PETSP Chlorophyll a-b binding protein 91R, chloro...   288   2e-77
sp|P06671|CB22_MAIZE Chlorophyll a-b binding protein, chloroplas...   288   2e-77
sp|P12470|CB25_NICPL Chlorophyll a-b binding protein E, chloropl...   287   3e-77
sp|P15193|CB2A_PINSY Chlorophyll a-b binding protein type 2 memb...   286   4e-77
sp|P24006|CB2A_PYRPY Chlorophyll a-b binding protein 1A, chlorop...   286   6e-77
sp|P09756|CB23_SOYBN Chlorophyll a-b binding protein 3, chloropl...   286   6e-77
sp|P04780|CB22_PETSP Chlorophyll a-b binding protein 22L, chloro...   285   1e-76
sp|P04779|CB21_PETSP Chlorophyll a-b binding protein 13, chlorop...   285   1e-76
sp|P15194|CB2B_PINSY Chlorophyll a-b binding protein type 2 memb...   284   2e-76
sp|P12471|CB21_SOYBN Chlorophyll a-b binding protein, chloroplas...   284   3e-76

>sp|P12329|CB21_MAIZE Chlorophyll a-b binding protein 1,
           chloroplastic OS=Zea mays GN=CAB1 PE=3 SV=1
          Length = 262

 Score =  296 bits (757), Expect = 7e-80
 Identities = 139/161 (86%), Positives = 150/161 (93%), Gaps = 4/161 (2%)
 Frame = +1

Query: 130 KVGNVGEARVSMRKTVSK----SSDSPWYGPDRVKYLGPFSGEAPSYLKGEFPGDYGWDT 297
           KVG+ GE R++MRKTV K    +S SPWYGPDRVKYLGPFSGE PSYL GEFPGDYGWDT
Sbjct: 19  KVGSFGEGRITMRKTVGKPKVAASGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDT 78

Query: 298 AGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAEG 477
           AGLSADPETFAKNRELEVIH+RWAMLGALGCV PELL++NGVKFGEAVWFKAGSQIF+EG
Sbjct: 79  AGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEG 138

Query: 478 GLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLG 600
           GLDYLGNPSL+HAQSILAIWACQV+LMGAVEGYR+AGGPLG
Sbjct: 139 GLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLG 179


>sp|P20866|CB2_PHYPA Chlorophyll a-b binding protein, chloroplastic
           OS=Physcomitrella patens PE=3 SV=1
          Length = 269

 Score =  295 bits (754), Expect = 2e-79
 Identities = 146/173 (84%), Positives = 160/173 (92%), Gaps = 3/173 (1%)
 Frame = +1

Query: 91  GQAVYKPQSELSSKV-GNVGEARVSMRKTVSKS--SDSPWYGPDRVKYLGPFSGEAPSYL 261
           GQ++ KP +ELS KV GNV EARV+MR+TVSKS  SD+ WYG DR K+LGPFSGE PSYL
Sbjct: 14  GQSLVKPVNELSRKVLGNV-EARVTMRRTVSKSAGSDTIWYGADRPKFLGPFSGETPSYL 72

Query: 262 KGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAV 441
            GEF GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGC+TPELLAK+GVKFGEAV
Sbjct: 73  NGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFGEAV 132

Query: 442 WFKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLG 600
           WFKAG+QIF+EGGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYRVAGGPLG
Sbjct: 133 WFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLG 185



 Score = 30.8 bits (68), Expect = 5.5
 Identities = 16/50 (32%), Positives = 26/50 (52%)
 Frame = +1

Query: 271 FPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNG 420
           +PG   +D  GL+ DP+TFA+ +  E+ + R AM    G     ++   G
Sbjct: 192 YPGG-SFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 240


>sp|P27493|CB22_TOBAC Chlorophyll a-b binding protein 21,
           chloroplastic OS=Nicotiana tabacum GN=CAB21 PE=2 SV=1
          Length = 265

 Score =  294 bits (752), Expect = 3e-79
 Identities = 141/154 (91%), Positives = 146/154 (94%), Gaps = 2/154 (1%)
 Frame = +1

Query: 145 GEARVSMRKTVSK--SSDSPWYGPDRVKYLGPFSGEAPSYLKGEFPGDYGWDTAGLSADP 318
           G  RVSMRKTV+K  +S SPWYGPDRVKYLGPFSGE+PSYL GEFPGDYGWDTAGLSADP
Sbjct: 29  GNGRVSMRKTVAKPVASSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADP 88

Query: 319 ETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAEGGLDYLGN 498
           ETFAKNRELEVIH RWAMLGALGCV PELLA+NGVKFGEAVWFKAGSQIF+EGGLDYLGN
Sbjct: 89  ETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGN 148

Query: 499 PSLVHAQSILAIWACQVILMGAVEGYRVAGGPLG 600
           PSLVHAQSILAIWACQVILMGAVEGYRVAGGPLG
Sbjct: 149 PSLVHAQSILAIWACQVILMGAVEGYRVAGGPLG 182


>sp|P12332|CB21_SILPR Chlorophyll a-b binding protein, chloroplastic
           (Fragment) OS=Silene pratensis PE=2 SV=2
          Length = 205

 Score =  294 bits (752), Expect = 3e-79
 Identities = 141/170 (82%), Positives = 150/170 (88%)
 Frame = +1

Query: 91  GQAVYKPQSELSSKVGNVGEARVSMRKTVSKSSDSPWYGPDRVKYLGPFSGEAPSYLKGE 270
           GQ + KPQ+EL  KVG  G  RVSMR+T+  + +S WYGPDR KYLGPFS + PSYL GE
Sbjct: 13  GQTLLKPQNELVRKVGGNG-GRVSMRRTIKSAPESIWYGPDRPKYLGPFSEQTPSYLTGE 71

Query: 271 FPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFK 450
           FPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PELLAKNGVKFGEAVWFK
Sbjct: 72  FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAKNGVKFGEAVWFK 131

Query: 451 AGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLG 600
           AGSQIF EGGLDYLGNP+LVHAQSILAIWACQV+LMGAVEGYRV GGPLG
Sbjct: 132 AGSQIFQEGGLDYLGNPNLVHAQSILAIWACQVVLMGAVEGYRVGGGPLG 181


>sp|P12333|CB2A_SPIOL Chlorophyll a-b binding protein, chloroplastic
           OS=Spinacia oleracea PE=1 SV=1
          Length = 267

 Score =  292 bits (747), Expect = 1e-78
 Identities = 138/157 (87%), Positives = 145/157 (92%), Gaps = 4/157 (2%)
 Frame = +1

Query: 142 VGEARVSMRKTVSK----SSDSPWYGPDRVKYLGPFSGEAPSYLKGEFPGDYGWDTAGLS 309
           +GE R++MRKT  K     S SPWYGPDRVKYLGPFSGE+PSYL GEFPGDYGWDTAGLS
Sbjct: 28  IGEGRITMRKTAGKPKTVQSSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLS 87

Query: 310 ADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAEGGLDY 489
           ADPETFAKNRELEVIH RWAMLGALGCV PELLA+NGVKFGEAVWFKAGSQIF+EGGLDY
Sbjct: 88  ADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDY 147

Query: 490 LGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLG 600
           LGNPSLVHAQSILAIWACQVILMGAVEGYR+AGGPLG
Sbjct: 148 LGNPSLVHAQSILAIWACQVILMGAVEGYRIAGGPLG 184


>sp|P07370|CB2B_SOLLC Chlorophyll a-b binding protein 1B,
           chloroplastic OS=Solanum lycopersicum GN=CAB1B PE=3 SV=1
          Length = 265

 Score =  291 bits (746), Expect = 1e-78
 Identities = 143/173 (82%), Positives = 153/173 (88%), Gaps = 3/173 (1%)
 Frame = +1

Query: 91  GQAVYKPQSELSSKVGNV-GEARVSMRKTVSKS--SDSPWYGPDRVKYLGPFSGEAPSYL 261
           GQAV     +LS     + G  R++MRK V+KS  S SPWYGPDRVKYLGPFSGE+PSYL
Sbjct: 15  GQAV-----KLSPSASEISGNGRITMRKAVAKSAPSSSPWYGPDRVKYLGPFSGESPSYL 69

Query: 262 KGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAV 441
            GEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PELLA+NGVKFGEAV
Sbjct: 70  TGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAV 129

Query: 442 WFKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLG 600
           WFKAGSQIF+EGGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYR+AGGPLG
Sbjct: 130 WFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLG 182


>sp|P27496|CB25_TOBAC Chlorophyll a-b binding protein 50,
           chloroplastic OS=Nicotiana tabacum GN=CAB50 PE=2 SV=1
          Length = 267

 Score =  291 bits (745), Expect = 2e-78
 Identities = 139/156 (89%), Positives = 146/156 (93%), Gaps = 4/156 (2%)
 Frame = +1

Query: 145 GEARVSMRKTVSK----SSDSPWYGPDRVKYLGPFSGEAPSYLKGEFPGDYGWDTAGLSA 312
           G  +V+MRKTV+K    SS SPWYGPDRVKYLGPFSGE+PSYL GEFPGDYGWDTAGLSA
Sbjct: 29  GNGKVTMRKTVTKAKPLSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSA 88

Query: 313 DPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAEGGLDYL 492
           DPETFAKNRELEVIH RWAMLGALGCV PELLA+NGVKFGEAVWFKAGSQIF+EGGLDYL
Sbjct: 89  DPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYL 148

Query: 493 GNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLG 600
           GNPSLVHAQSILAIWACQV+LMGAVEGYRVAGGPLG
Sbjct: 149 GNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLG 184


>sp|P14278|CB24_SOLLC Chlorophyll a-b binding protein 4,
           chloroplastic OS=Solanum lycopersicum GN=CAB4 PE=2 SV=1
          Length = 265

 Score =  291 bits (745), Expect = 2e-78
 Identities = 137/170 (80%), Positives = 149/170 (87%)
 Frame = +1

Query: 91  GQAVYKPQSELSSKVGNVGEARVSMRKTVSKSSDSPWYGPDRVKYLGPFSGEAPSYLKGE 270
           GQAV K Q+E   KVGN GE R++MR+TV  +  S WYG DR KYLGPFS + PSYL GE
Sbjct: 13  GQAVGKSQNEFIRKVGNFGEGRITMRRTVKSAPQSIWYGEDRPKYLGPFSEQTPSYLTGE 72

Query: 271 FPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFK 450
           FPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCV PE+L+KNGVKFGEAVWFK
Sbjct: 73  FPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVWFK 132

Query: 451 AGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLG 600
           AGSQIF+EGGLDYLGNP+LVHAQSILAIWACQV+LMG VEGYRV GGPLG
Sbjct: 133 AGSQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMGFVEGYRVGGGPLG 182


>sp|P27492|CB21_TOBAC Chlorophyll a-b binding protein 16,
           chloroplastic OS=Nicotiana tabacum GN=CAB16 PE=2 SV=1
          Length = 266

 Score =  291 bits (745), Expect = 2e-78
 Identities = 143/166 (86%), Positives = 150/166 (90%), Gaps = 4/166 (2%)
 Frame = +1

Query: 115 SELSSKVGNVGEARVSMRKTVSK----SSDSPWYGPDRVKYLGPFSGEAPSYLKGEFPGD 282
           S  SS+V   G  +V+MRKT SK    SS SPWYGPDRVKYLGPFSGE+PSYL GEFPGD
Sbjct: 20  SPSSSEV--TGNGKVTMRKTASKAKPVSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGD 77

Query: 283 YGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQ 462
           YGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PELLA+NGVKFGEAVWFKAGSQ
Sbjct: 78  YGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQ 137

Query: 463 IFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLG 600
           IF+EGGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYRVAGGPLG
Sbjct: 138 IFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLG 183


>sp|P27495|CB24_TOBAC Chlorophyll a-b binding protein 40,
           chloroplastic OS=Nicotiana tabacum GN=CAB40 PE=2 SV=1
          Length = 267

 Score =  291 bits (744), Expect = 2e-78
 Identities = 139/156 (89%), Positives = 145/156 (92%), Gaps = 4/156 (2%)
 Frame = +1

Query: 145 GEARVSMRKTVSK----SSDSPWYGPDRVKYLGPFSGEAPSYLKGEFPGDYGWDTAGLSA 312
           G  +V+MRKT SK    SS SPWYGPDRVKYLGPFSGE+PSYL GEFPGDYGWDTAGLSA
Sbjct: 29  GNGKVTMRKTASKAKTVSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSA 88

Query: 313 DPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAEGGLDYL 492
           DPETFAKNRELEVIH RWAMLGALGCV PELLA+NGVKFGEAVWFKAGSQIF+EGGLDYL
Sbjct: 89  DPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYL 148

Query: 493 GNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLG 600
           GNPSLVHAQSILAIWACQV+LMGAVEGYRVAGGPLG
Sbjct: 149 GNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLG 184
tr_hit_id A9RNP2
Definition tr|A9RNP2|A9RNP2_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 170
Score (bit) 307.0
E-value 4.0e-82
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK955111|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0022_D16, 5'
         (600 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9RNP2|A9RNP2_PHYPA Predicted protein OS=Physcomitrella paten...   307   4e-82
tr|Q9SXW8|Q9SXW8_PHYPA Chlorophyll a/b-binding protein OS=Physco...   303   7e-81
tr|A9T769|A9T769_PHYPA Predicted protein OS=Physcomitrella paten...   303   7e-81
tr|Q39768|Q39768_GINBI Light-harvesting chlorophyll a/b binding ...   301   1e-80
tr|A9RAS2|A9RAS2_PHYPA Predicted protein OS=Physcomitrella paten...   301   3e-80
tr|A9S6F4|A9S6F4_PHYPA Predicted protein OS=Physcomitrella paten...   300   3e-80
tr|A9RJS3|A9RJS3_PHYPA Predicted protein OS=Physcomitrella paten...   299   1e-79
tr|Q765P5|Q765P5_PHYPA Light-harvesting chlorophyll a/b-binding ...   298   2e-79
tr|A9RBQ3|A9RBQ3_PHYPA Predicted protein OS=Physcomitrella paten...   297   4e-79
tr|O64445|O64445_NICSY Light harvesting chlorophyll a/b-binding ...   296   8e-79
tr|B4FNR1|B4FNR1_MAIZE Chlorophyll a-b binding protein 2 OS=Zea ...   296   8e-79
tr|A9TL35|A9TL35_PHYPA Predicted protein OS=Physcomitrella paten...   295   1e-78
tr|O04687|O04687_MESCR Chlorophyll a/b-binding protein OS=Mesemb...   295   1e-78
tr|Q765P6|Q765P6_PHYPA Light-harvesting chlorophyll a/b-binding ...   295   2e-78
tr|Q40961|Q40961_PRUPE Light-harvesting chlorophyll a/b-binding ...   295   2e-78
tr|A9RT62|A9RT62_PHYPA Predicted protein OS=Physcomitrella paten...   295   2e-78
tr|O64443|O64443_NICSY Light harvesting chlorophyll a/b-binding ...   294   2e-78
tr|B6STN4|B6STN4_MAIZE Chlorophyll a-b binding protein 2 OS=Zea ...   294   2e-78
tr|A9RBQ5|A9RBQ5_PHYPA Predicted protein OS=Physcomitrella paten...   294   2e-78
tr|A7Q0V3|A7Q0V3_VITVI Chromosome chr7 scaffold_42, whole genome...   293   5e-78
tr|A4F3R4|A4F3R4_SPIOL Major chlorophyll a/b binding protein LHC...   293   5e-78
tr|A4F3R3|A4F3R3_SPIOL Major chlorophyll a/b binding protein LHC...   293   7e-78
tr|O64444|O64444_NICSY Light harvesting chlorophyll a/b-binding ...   292   9e-78
tr|O04686|O04686_MESCR Chlorophyll a/b-binding protein OS=Mesemb...   292   9e-78
tr|Q9M600|Q9M600_EUPES Chlorophyll a/b binding protein OS=Euphor...   292   1e-77
tr|O64442|O64442_NICSY Light harvesting chlorophyll a/b-binding ...   292   1e-77
tr|B3WFZ6|B3WFZ6_SPIOL Major chlorophyll a/b binding protein LHC...   292   1e-77
tr|Q41424|Q41424_SOLTU Chlorophyll a/b binding protein OS=Solanu...   291   2e-77
tr|Q41421|Q41421_SOLTU Chlorophyll a/b binding protein OS=Solanu...   291   2e-77
tr|Q2XTE0|Q2XTE0_SOLTU Chlorophyll a-b binding protein 3C-like O...   291   2e-77

>tr|A9RNP2|A9RNP2_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_176684 PE=4 SV=1
          Length = 265

 Score =  307 bits (786), Expect = 4e-82
 Identities = 150/170 (88%), Positives = 158/170 (92%)
 Frame = +1

Query: 91  GQAVYKPQSELSSKVGNVGEARVSMRKTVSKSSDSPWYGPDRVKYLGPFSGEAPSYLKGE 270
           GQ++ KP +ELS KVGNV EAR+SMRKT SKSSDS WYG DR KYLGPFSGE PSYL GE
Sbjct: 14  GQSLLKPVNELSRKVGNV-EARISMRKTASKSSDSIWYGADRPKYLGPFSGETPSYLNGE 72

Query: 271 FPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFK 450
           F GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFK
Sbjct: 73  FAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFK 132

Query: 451 AGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLG 600
           AG+QIF+EGGLDYLGNPSLVHAQSILAIWA QVILMGAVEGYRVAGGPLG
Sbjct: 133 AGAQIFSEGGLDYLGNPSLVHAQSILAIWASQVILMGAVEGYRVAGGPLG 182


>tr|Q9SXW8|Q9SXW8_PHYPA Chlorophyll a/b-binding protein
           OS=Physcomitrella patens PE=2 SV=1
          Length = 268

 Score =  303 bits (775), Expect = 7e-81
 Identities = 150/172 (87%), Positives = 159/172 (92%), Gaps = 2/172 (1%)
 Frame = +1

Query: 91  GQAVYKPQSELSSKVGNVGEARVSMRKTVSKSS--DSPWYGPDRVKYLGPFSGEAPSYLK 264
           GQA+ KP SELS KV N GEARV+MRKTVSKSS  DS WYG DR K+LGPFSGE PSYL 
Sbjct: 15  GQALLKPVSELSRKV-NAGEARVTMRKTVSKSSGSDSIWYGADRPKFLGPFSGETPSYLN 73

Query: 265 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 444
           GEF GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGC+TPELLAK+GVKFGEAVW
Sbjct: 74  GEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFGEAVW 133

Query: 445 FKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLG 600
           FKAG+QIF+EGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLG
Sbjct: 134 FKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLG 185


>tr|A9T769|A9T769_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_219547 PE=4 SV=1
          Length = 268

 Score =  303 bits (775), Expect = 7e-81
 Identities = 150/172 (87%), Positives = 159/172 (92%), Gaps = 2/172 (1%)
 Frame = +1

Query: 91  GQAVYKPQSELSSKVGNVGEARVSMRKTVSKSS--DSPWYGPDRVKYLGPFSGEAPSYLK 264
           GQA+ KP SELS KV N GEARV+MRKTVSKSS  DS WYG DR K+LGPFSGE PSYL 
Sbjct: 15  GQALLKPVSELSRKV-NAGEARVTMRKTVSKSSGSDSIWYGADRPKFLGPFSGETPSYLN 73

Query: 265 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 444
           GEF GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGC+TPELLAK+GVKFGEAVW
Sbjct: 74  GEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFGEAVW 133

Query: 445 FKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLG 600
           FKAG+QIF+EGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLG
Sbjct: 134 FKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLG 185


>tr|Q39768|Q39768_GINBI Light-harvesting chlorophyll a/b binding
           protein of photosystem II OS=Ginkgo biloba PE=2 SV=1
          Length = 270

 Score =  301 bits (772), Expect = 1e-80
 Identities = 148/175 (84%), Positives = 158/175 (90%), Gaps = 5/175 (2%)
 Frame = +1

Query: 91  GQAVYKPQSELSSKVGNV-GEARVSMRKTVSK----SSDSPWYGPDRVKYLGPFSGEAPS 255
           GQ V KPQ+E    VG V GE R++MRKT SK    SS SPWYGPDRVKYLGPFSGEAPS
Sbjct: 16  GQIVLKPQNEF---VGGVHGEGRITMRKTASKKVVASSGSPWYGPDRVKYLGPFSGEAPS 72

Query: 256 YLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGE 435
           YL GEFPGDYGWDTAGLSADPETFAKNRELEVIH+RWAMLGALGCV PELL++NGVKFGE
Sbjct: 73  YLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGE 132

Query: 436 AVWFKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLG 600
           AVWFKAGSQIF++GGLDYLGNPSL+HAQSILAIWACQVILMGAVEGYR+AGGPLG
Sbjct: 133 AVWFKAGSQIFSDGGLDYLGNPSLIHAQSILAIWACQVILMGAVEGYRIAGGPLG 187


>tr|A9RAS2|A9RAS2_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_155384 PE=4 SV=1
          Length = 267

 Score =  301 bits (770), Expect = 3e-80
 Identities = 148/172 (86%), Positives = 159/172 (92%), Gaps = 2/172 (1%)
 Frame = +1

Query: 91  GQAVYKPQSELSSKVGNVGEARVSMRKTVSKS--SDSPWYGPDRVKYLGPFSGEAPSYLK 264
           GQ V KP +ELS KVGNV EARV+MR+TVSKS  SDS WYG DR K+LGPFSGE PSYL 
Sbjct: 14  GQGVLKPVNELSRKVGNV-EARVTMRRTVSKSAGSDSIWYGADRPKFLGPFSGETPSYLT 72

Query: 265 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 444
           GEF GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGC+TPELLAK+GVKFGEAVW
Sbjct: 73  GEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFGEAVW 132

Query: 445 FKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLG 600
           FKAG+QIF+EGGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYRVAGGPLG
Sbjct: 133 FKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLG 184


>tr|A9S6F4|A9S6F4_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_124625 PE=4 SV=1
          Length = 267

 Score =  300 bits (769), Expect = 3e-80
 Identities = 147/172 (85%), Positives = 160/172 (93%), Gaps = 2/172 (1%)
 Frame = +1

Query: 91  GQAVYKPQSELSSKVGNVGEARVSMRKTVSKS--SDSPWYGPDRVKYLGPFSGEAPSYLK 264
           GQ++ KP +ELS KVGNV EARV+MR+TVSKS  SDS WYG DR K+LGPFSGE PSYL 
Sbjct: 14  GQSLVKPVNELSRKVGNV-EARVTMRRTVSKSAGSDSIWYGADRPKFLGPFSGETPSYLN 72

Query: 265 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 444
           GEF GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGC+TPELLAK+GVKFGEAVW
Sbjct: 73  GEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFGEAVW 132

Query: 445 FKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLG 600
           FKAG+QIF+EGGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYRVAGGPLG
Sbjct: 133 FKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLG 184


>tr|A9RJS3|A9RJS3_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_175594 PE=4 SV=1
          Length = 267

 Score =  299 bits (765), Expect = 1e-79
 Identities = 149/172 (86%), Positives = 158/172 (91%), Gaps = 2/172 (1%)
 Frame = +1

Query: 91  GQAVYKPQSELSSKVGNVGEARVSMRKTVSKS--SDSPWYGPDRVKYLGPFSGEAPSYLK 264
           GQ++ KP +ELS KVGNV EARVSMRK+ SKS  SDS WYG DR KYLGPFSGE PSYL 
Sbjct: 14  GQSLLKPVNELSRKVGNV-EARVSMRKSASKSAASDSIWYGADRPKYLGPFSGETPSYLN 72

Query: 265 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 444
           GEF GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGCVTPELLAK+GVKFGEAVW
Sbjct: 73  GEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCVTPELLAKSGVKFGEAVW 132

Query: 445 FKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLG 600
           FKAG+QIF+EGGLDYLGNPSLVHAQSILAIWA QVILMGAVEGYRVAGGPLG
Sbjct: 133 FKAGAQIFSEGGLDYLGNPSLVHAQSILAIWASQVILMGAVEGYRVAGGPLG 184


>tr|Q765P5|Q765P5_PHYPA Light-harvesting chlorophyll a/b-binding
           protein 2 (Predicted protein) OS=Physcomitrella patens
           subsp. patens GN=PpLhcb2 PE=4 SV=1
          Length = 267

 Score =  298 bits (762), Expect = 2e-79
 Identities = 146/172 (84%), Positives = 159/172 (92%), Gaps = 2/172 (1%)
 Frame = +1

Query: 91  GQAVYKPQSELSSKVGNVGEARVSMRKTVSKS--SDSPWYGPDRVKYLGPFSGEAPSYLK 264
           GQ++ KP +ELS KVG+  +ARV+MR+TV+KS  SDS WYG DR KYLGPFSGE PSYL 
Sbjct: 14  GQSLLKPVNELSRKVGS-SQARVTMRRTVNKSAGSDSIWYGADRPKYLGPFSGETPSYLN 72

Query: 265 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 444
           GEF GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGCVTPELLAK+GVKFGEAVW
Sbjct: 73  GEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCVTPELLAKSGVKFGEAVW 132

Query: 445 FKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLG 600
           FKAG+QIF+EGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLG
Sbjct: 133 FKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLG 184


>tr|A9RBQ3|A9RBQ3_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_110819 PE=4 SV=1
          Length = 267

 Score =  297 bits (760), Expect = 4e-79
 Identities = 143/172 (83%), Positives = 161/172 (93%), Gaps = 2/172 (1%)
 Frame = +1

Query: 91  GQAVYKPQSELSSKVGNVGEARVSMRKTVSKS--SDSPWYGPDRVKYLGPFSGEAPSYLK 264
           GQ++++P +ELS KVGNV ++RV+MR+TV+KS  SDS WYG DR K+LGPFSGE PSYL 
Sbjct: 14  GQSLFQPVNELSRKVGNV-DSRVTMRRTVNKSAGSDSIWYGADRPKFLGPFSGETPSYLN 72

Query: 265 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 444
           GEF GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGC+TPELLAK+GVKFGEAVW
Sbjct: 73  GEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFGEAVW 132

Query: 445 FKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLG 600
           FKAG+QIF+EGGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYRVAGGPLG
Sbjct: 133 FKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLG 184


>tr|O64445|O64445_NICSY Light harvesting chlorophyll a/b-binding
           protein OS=Nicotiana sylvestris GN=Lhcb1*4 PE=3 SV=1
          Length = 265

 Score =  296 bits (757), Expect = 8e-79
 Identities = 148/173 (85%), Positives = 154/173 (89%), Gaps = 3/173 (1%)
 Frame = +1

Query: 91  GQAVYKPQSELSSKVGNV-GEARVSMRKTVSK--SSDSPWYGPDRVKYLGPFSGEAPSYL 261
           GQAV     +LS     + G  RVSMRKTV+K  +S SPWYGPDRVKYLGPFSGEAPSYL
Sbjct: 15  GQAV-----KLSPSASEITGNGRVSMRKTVAKPVASSSPWYGPDRVKYLGPFSGEAPSYL 69

Query: 262 KGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAV 441
            GEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PELLA+NGVKFGEAV
Sbjct: 70  TGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAV 129

Query: 442 WFKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLG 600
           WFKAGSQIF+EGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLG
Sbjct: 130 WFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLG 182