DK955123 |
Clone id |
TST39A01NGRL0022_E04 |
Library |
TST39 |
Length |
651 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0022_E04. 5' end sequence. |
Accession |
DK955123 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
- |
Sequence |
CACACACACACACACACACACACACACACACACCATGCCTGCATCCACATGATGTGTCCA CATGCTTGCAGGCAGTCGCCGGTTTTGTCTGCAGGTCGTCGCTGGGCTCCATAGGCAGCC GCAGCAGCTGTGCAGCGGTCCATCAACTGCTATGTAAGAAGTGTGTACTCAGTAGTACTT ACTACTAACAGGTGCAGCGGAACGAGCCTTGTCCCATTAGGATGAAACATTCTAAGGCCC GTGATTAATCCTATAAGCAGCTCCTAACTCCTATTATGGGACGCGCCCCTTGTTGCGATA AAGTAGGGCTGAAGAAAGGCCCTTGGACTGCGGACGAAGACGAGAAGCTGGCCTCCTACA TTAGTAGGCATGGCCATGGAAGTTGGCGAGCTCTCCCCAAGAAAGCTGGCCTGTTGAGGT GTGGTAAAAGCTGCCGATTGCGGTGGACCAATTACCTGAGACCAGATATCAAGCGAGGAG AGTTCACTGCTCTTGAGGAGCAAACCATCATTCAGCTCCATGCTTTGCTCGGCAACAGGT GGTCTGCCATTGCCGCCCATCTCCCCAAACGAACAGATAATGAAATAAAAAATTATTGGA ACACACATCTGAAGAAGAGGCTTATAAACTTGGGCCTAGATCCCGCAACCC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q7XBH4 |
Definition |
sp|Q7XBH4|MYB4_ORYSJ Myb-related protein Myb4 OS=Oryza sativa subsp. japonica |
Align length |
116 |
Score (bit) |
205.0 |
E-value |
2.0e-52 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q02992 |
Definition |
tr|Q02992|Q02992_PETHY Protein 1 OS=Petunia hybrida |
Align length |
125 |
Score (bit) |
239.0 |
E-value |
1.0e-61 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK955123|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0022_E04, 5' (651 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q02992|Q02992_PETHY Protein 1 OS=Petunia hybrida GN=myb.Ph3 P... 239 1e-61 tr|A9P0V4|A9P0V4_PICSI Putative uncharacterized protein OS=Picea... 238 2e-61 tr|Q9LE63|Q9LE63_ARATH Putative transcription factor (Putative M... 238 3e-61 tr|Q84U53|Q84U53_9ASPA MYB1 OS=Dendrobium sp. XMW-2002-1 GN=MYB1... 236 7e-61 tr|A7PMZ0|A7PMZ0_VITVI Chromosome chr14 scaffold_21, whole genom... 236 9e-61 tr|A4GZI1|A4GZI1_DAUCA Transcription factor DcMYB2 OS=Daucus car... 236 9e-61 tr|Q9LXF1|Q9LXF1_ARATH Myb-related protein-like (At5g15310) (MYB... 235 2e-60 tr|Q8GUA1|Q8GUA1_ORYSJ Os08g0433400 protein OS=Oryza sativa subs... 234 3e-60 tr|A2YVI0|A2YVI0_ORYSI Putative uncharacterized protein OS=Oryza... 234 3e-60 tr|A2Q123|A2Q123_HUMLU Putative transcription factor OS=Humulus ... 234 3e-60 tr|Q6R098|Q6R098_ARATH MYB transcription factor OS=Arabidopsis t... 234 4e-60 tr|Q5PXZ4|Q5PXZ4_ANTMA MYB transcription factor MIXTA-like 2 OS=... 232 1e-59 tr|A7QEA1|A7QEA1_VITVI Chromosome chr1 scaffold_84, whole genome... 232 1e-59 tr|A5AK22|A5AK22_VITVI Putative uncharacterized protein OS=Vitis... 232 1e-59 tr|Q9ATD4|Q9ATD4_GOSHI GHMYB25 OS=Gossypium hirsutum GN=ghmyb25 ... 232 2e-59 tr|A5JYF5|A5JYF5_PICGL R2R3-MYB transcription factor MYB11 OS=Pi... 231 4e-59 tr|Q7XUV5|Q7XUV5_ORYSJ Os04g0461000 protein OS=Oryza sativa subs... 229 8e-59 tr|Q01II6|Q01II6_ORYSA H0219H12.11 protein OS=Oryza sativa GN=H0... 229 8e-59 tr|A2XU96|A2XU96_ORYSI Putative uncharacterized protein OS=Oryza... 229 8e-59 tr|Q38739|Q38739_ANTMA Mixta protein OS=Antirrhinum majus GN=mix... 229 1e-58 tr|Q9XFM9|Q9XFM9_ANTMA Myb-related transcription factor mixta-li... 228 2e-58 tr|Q6EP51|Q6EP51_ORYSJ MYB27 protein-like OS=Oryza sativa subsp.... 227 5e-58 tr|Q0E045|Q0E045_ORYSJ Os02g0579300 protein OS=Oryza sativa subs... 227 5e-58 tr|A2X6G0|A2X6G0_ORYSI Putative uncharacterized protein OS=Oryza... 227 5e-58 tr|B6TVL1|B6TVL1_MAIZE DNA binding protein OS=Zea mays PE=2 SV=1 225 2e-57 tr|A9TTU6|A9TTU6_PHYPA Predicted protein (Fragment) OS=Physcomit... 224 3e-57 tr|Q9LDI5|Q9LDI5_ARATH Putative transcription factor (At3g02940)... 224 4e-57 tr|A9TUL2|A9TUL2_PHYPA Predicted protein (Fragment) OS=Physcomit... 222 1e-56 tr|A7NUY6|A7NUY6_VITVI Chromosome chr18 scaffold_1, whole genome... 222 1e-56 tr|Q9M2D9|Q9M2D9_ARATH At3g61250 OS=Arabidopsis thaliana GN=T20K... 221 4e-56
>tr|Q02992|Q02992_PETHY Protein 1 OS=Petunia hybrida GN=myb.Ph3 PE=2 SV=1 Length = 421
Score = 239 bits (609), Expect = 1e-61 Identities = 106/125 (84%), Positives = 114/125 (91%) Frame = +3
Query: 276 MGRAPCCDKVGLKKGPWTADEDEKLASYISRHGHGSWRALPKKAGLLRCGKSCRLRWTNY 455 MGR+PCCDKVGLKKGPWT +ED+KL +YI HGHGSWRALP KAGL RCGKSCRLRWTNY Sbjct: 1 MGRSPCCDKVGLKKGPWTPEEDQKLLAYIEEHGHGSWRALPAKAGLQRCGKSCRLRWTNY 60
Query: 456 LRPDIKRGEFTALEEQTIIQLHALLGNRWSAIAAHLPKRTDNEIKNYWNTHLKKRLINLG 635 LRPDIKRG+FT EEQTIIQLHALLGNRWSAIA HLPKRTDNEIKNYWNTHLKKRL+ +G Sbjct: 61 LRPDIKRGKFTLQEEQTIIQLHALLGNRWSAIATHLPKRTDNEIKNYWNTHLKKRLVKMG 120
Query: 636 LDPAT 650 +DP T Sbjct: 121 IDPVT 125
>tr|A9P0V4|A9P0V4_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 330
Score = 238 bits (608), Expect = 2e-61 Identities = 105/125 (84%), Positives = 115/125 (92%) Frame = +3
Query: 276 MGRAPCCDKVGLKKGPWTADEDEKLASYISRHGHGSWRALPKKAGLLRCGKSCRLRWTNY 455 MGRAPCC+KVGLKKGPWT +ED+KL +YI HGHGSWRALP+KAGLLRCGKSCRLRW NY Sbjct: 1 MGRAPCCEKVGLKKGPWTPEEDQKLVAYIQEHGHGSWRALPQKAGLLRCGKSCRLRWANY 60
Query: 456 LRPDIKRGEFTALEEQTIIQLHALLGNRWSAIAAHLPKRTDNEIKNYWNTHLKKRLINLG 635 LRPDIKRG+F+A EEQTIIQLHALLGNRWS IA HLPKRTDNEIKNYWNTHLKKRL+ +G Sbjct: 61 LRPDIKRGKFSAQEEQTIIQLHALLGNRWSTIATHLPKRTDNEIKNYWNTHLKKRLLQMG 120
Query: 636 LDPAT 650 +DP T Sbjct: 121 IDPVT 125
>tr|Q9LE63|Q9LE63_ARATH Putative transcription factor (Putative Myb-related transcription factor) OS=Arabidopsis thaliana GN=MYB106 PE=2 SV=1 Length = 345
Score = 238 bits (606), Expect = 3e-61 Identities = 105/125 (84%), Positives = 114/125 (91%) Frame = +3
Query: 276 MGRAPCCDKVGLKKGPWTADEDEKLASYISRHGHGSWRALPKKAGLLRCGKSCRLRWTNY 455 MGR+PCCDK GLKKGPWT +ED+KL +YI HGHGSWR+LP+KAGL RCGKSCRLRWTNY Sbjct: 1 MGRSPCCDKAGLKKGPWTPEEDQKLLAYIEEHGHGSWRSLPEKAGLQRCGKSCRLRWTNY 60
Query: 456 LRPDIKRGEFTALEEQTIIQLHALLGNRWSAIAAHLPKRTDNEIKNYWNTHLKKRLINLG 635 LRPDIKRG+FT EEQTIIQLHALLGNRWSAIA HLPKRTDNEIKNYWNTHLKKRLI +G Sbjct: 61 LRPDIKRGKFTVQEEQTIIQLHALLGNRWSAIATHLPKRTDNEIKNYWNTHLKKRLIKMG 120
Query: 636 LDPAT 650 +DP T Sbjct: 121 IDPVT 125
>tr|Q84U53|Q84U53_9ASPA MYB1 OS=Dendrobium sp. XMW-2002-1 GN=MYB1 PE=2 SV=1 Length = 367
Score = 236 bits (603), Expect = 7e-61 Identities = 105/125 (84%), Positives = 114/125 (91%) Frame = +3
Query: 276 MGRAPCCDKVGLKKGPWTADEDEKLASYISRHGHGSWRALPKKAGLLRCGKSCRLRWTNY 455 MGR+PCCDKVGLKKGPWT +ED+KL +YI +HGHGSWRALP KAGL RCGKSCRLRWTNY Sbjct: 1 MGRSPCCDKVGLKKGPWTPEEDQKLLAYIEKHGHGSWRALPNKAGLQRCGKSCRLRWTNY 60
Query: 456 LRPDIKRGEFTALEEQTIIQLHALLGNRWSAIAAHLPKRTDNEIKNYWNTHLKKRLINLG 635 LRPDIKRG+F+ EEQTIIQLHALLGNRWSAIA HLPKRTDNEIKNYWNTHLKKRL +G Sbjct: 61 LRPDIKRGKFSMQEEQTIIQLHALLGNRWSAIATHLPKRTDNEIKNYWNTHLKKRLAKMG 120
Query: 636 LDPAT 650 +DP T Sbjct: 121 IDPIT 125
>tr|A7PMZ0|A7PMZ0_VITVI Chromosome chr14 scaffold_21, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00021000001 PE=4 SV=1 Length = 330
Score = 236 bits (602), Expect = 9e-61 Identities = 105/125 (84%), Positives = 113/125 (90%) Frame = +3
Query: 276 MGRAPCCDKVGLKKGPWTADEDEKLASYISRHGHGSWRALPKKAGLLRCGKSCRLRWTNY 455 MGR+PCCDKVGLKKGPWT +ED+KL +YI HGHGSWRALP KAGL RCGKSCRLRWTNY Sbjct: 1 MGRSPCCDKVGLKKGPWTPEEDQKLLAYIEEHGHGSWRALPSKAGLQRCGKSCRLRWTNY 60
Query: 456 LRPDIKRGEFTALEEQTIIQLHALLGNRWSAIAAHLPKRTDNEIKNYWNTHLKKRLINLG 635 LRPDIKRG+F+ EEQTIIQLHALLGNRWSAIA HLPKRTDNEIKNYWNTHLKKRL +G Sbjct: 61 LRPDIKRGKFSLQEEQTIIQLHALLGNRWSAIATHLPKRTDNEIKNYWNTHLKKRLAKMG 120
Query: 636 LDPAT 650 +DP T Sbjct: 121 IDPVT 125
>tr|A4GZI1|A4GZI1_DAUCA Transcription factor DcMYB2 OS=Daucus carota GN=DcMYB2 PE=2 SV=1 Length = 375
Score = 236 bits (602), Expect = 9e-61 Identities = 105/125 (84%), Positives = 113/125 (90%) Frame = +3
Query: 276 MGRAPCCDKVGLKKGPWTADEDEKLASYISRHGHGSWRALPKKAGLLRCGKSCRLRWTNY 455 MGR+PCCDKVGLKKGPWT +ED+KL +YI HGHGSWRALP KAGL RCGKSCRLRWTNY Sbjct: 1 MGRSPCCDKVGLKKGPWTPEEDQKLLAYIEEHGHGSWRALPSKAGLQRCGKSCRLRWTNY 60
Query: 456 LRPDIKRGEFTALEEQTIIQLHALLGNRWSAIAAHLPKRTDNEIKNYWNTHLKKRLINLG 635 LRPDIKRG+F+ EEQTIIQLHALLGNRWSAIA HLPKRTDNEIKNYWNTHLKKRL +G Sbjct: 61 LRPDIKRGKFSLQEEQTIIQLHALLGNRWSAIATHLPKRTDNEIKNYWNTHLKKRLTKMG 120
Query: 636 LDPAT 650 +DP T Sbjct: 121 IDPVT 125
>tr|Q9LXF1|Q9LXF1_ARATH Myb-related protein-like (At5g15310) (MYB transcription factor) OS=Arabidopsis thaliana GN=F8M21_200 PE=2 SV=1 Length = 326
Score = 235 bits (599), Expect = 2e-60 Identities = 103/125 (82%), Positives = 114/125 (91%) Frame = +3
Query: 276 MGRAPCCDKVGLKKGPWTADEDEKLASYISRHGHGSWRALPKKAGLLRCGKSCRLRWTNY 455 MGR+PCCDK+GLKKGPWT +ED+KL +YI HGHGSWR+LP+KAGL RCGKSCRLRWTNY Sbjct: 1 MGRSPCCDKLGLKKGPWTPEEDQKLLAYIEEHGHGSWRSLPEKAGLHRCGKSCRLRWTNY 60
Query: 456 LRPDIKRGEFTALEEQTIIQLHALLGNRWSAIAAHLPKRTDNEIKNYWNTHLKKRLINLG 635 LRPDIKRG+F EEQTIIQLHALLGNRWSAIA HLPKRTDNEIKNYWNTHLKKRL+ +G Sbjct: 61 LRPDIKRGKFNLQEEQTIIQLHALLGNRWSAIATHLPKRTDNEIKNYWNTHLKKRLVKMG 120
Query: 636 LDPAT 650 +DP T Sbjct: 121 IDPVT 125
>tr|Q8GUA1|Q8GUA1_ORYSJ Os08g0433400 protein OS=Oryza sativa subsp. japonica GN=myb27 PE=2 SV=1 Length = 357
Score = 234 bits (597), Expect = 3e-60 Identities = 103/125 (82%), Positives = 113/125 (90%) Frame = +3
Query: 276 MGRAPCCDKVGLKKGPWTADEDEKLASYISRHGHGSWRALPKKAGLLRCGKSCRLRWTNY 455 MGR+PCC+K+GLKKGPWT +ED+KL +YI HGHGSWRALP KAGL RCGKSCRLRWTNY Sbjct: 1 MGRSPCCEKIGLKKGPWTPEEDQKLLAYIEEHGHGSWRALPSKAGLQRCGKSCRLRWTNY 60
Query: 456 LRPDIKRGEFTALEEQTIIQLHALLGNRWSAIAAHLPKRTDNEIKNYWNTHLKKRLINLG 635 LRPDIKRG+F+ EEQTIIQLHALLGNRWSAIA HLPKRTDNEIKNYWNTHLKKRL +G Sbjct: 61 LRPDIKRGKFSLQEEQTIIQLHALLGNRWSAIATHLPKRTDNEIKNYWNTHLKKRLAKMG 120
Query: 636 LDPAT 650 +DP T Sbjct: 121 IDPVT 125
>tr|A2YVI0|A2YVI0_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_29338 PE=4 SV=1 Length = 357
Score = 234 bits (597), Expect = 3e-60 Identities = 103/125 (82%), Positives = 113/125 (90%) Frame = +3
Query: 276 MGRAPCCDKVGLKKGPWTADEDEKLASYISRHGHGSWRALPKKAGLLRCGKSCRLRWTNY 455 MGR+PCC+K+GLKKGPWT +ED+KL +YI HGHGSWRALP KAGL RCGKSCRLRWTNY Sbjct: 1 MGRSPCCEKIGLKKGPWTPEEDQKLLAYIEEHGHGSWRALPSKAGLQRCGKSCRLRWTNY 60
Query: 456 LRPDIKRGEFTALEEQTIIQLHALLGNRWSAIAAHLPKRTDNEIKNYWNTHLKKRLINLG 635 LRPDIKRG+F+ EEQTIIQLHALLGNRWSAIA HLPKRTDNEIKNYWNTHLKKRL +G Sbjct: 61 LRPDIKRGKFSLQEEQTIIQLHALLGNRWSAIATHLPKRTDNEIKNYWNTHLKKRLAKMG 120
Query: 636 LDPAT 650 +DP T Sbjct: 121 IDPVT 125
>tr|A2Q123|A2Q123_HUMLU Putative transcription factor OS=Humulus lupulus GN=HlMIXTA1 PE=2 SV=1 Length = 464
Score = 234 bits (597), Expect = 3e-60 Identities = 104/125 (83%), Positives = 113/125 (90%) Frame = +3
Query: 276 MGRAPCCDKVGLKKGPWTADEDEKLASYISRHGHGSWRALPKKAGLLRCGKSCRLRWTNY 455 MGR+PCC+KVGLKKGPWT +ED+KL +YI HGHGSWRALP KAGL RCGKSCRLRWTNY Sbjct: 1 MGRSPCCEKVGLKKGPWTPEEDQKLLAYIEEHGHGSWRALPAKAGLQRCGKSCRLRWTNY 60
Query: 456 LRPDIKRGEFTALEEQTIIQLHALLGNRWSAIAAHLPKRTDNEIKNYWNTHLKKRLINLG 635 LRPDIKRG+F+ EEQTIIQLHALLGNRWSAIA HLPKRTDNEIKNYWNTHLKKRL +G Sbjct: 61 LRPDIKRGKFSLQEEQTIIQLHALLGNRWSAIATHLPKRTDNEIKNYWNTHLKKRLTKMG 120
Query: 636 LDPAT 650 +DP T Sbjct: 121 IDPVT 125
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