DK955128
Clone id TST39A01NGRL0022_E09
Library
Length 536
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0022_E09. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence
GCACTCGCTGATCATCTCTAGACCGGCAGTAGCAATGGCGAGCTCTGTGGCTTCTTTGGC
AGTTGCTGCTCCCTCGTGCGCCCCGGCAGAGAGCCTATCTAAGAGCTTCTCCGGCCTCAG
GCCCACTACCCTCGCTGCCCCCAAGAGCGCCAACCCGCTCTCCATCTCCAACGGCAGCCG
CGTGAGCGCCATGCTTGTGTGGAAGCCGTATGACAACAAGAAGTTCGAGACTCTGTCCTA
CTTGCCGCCTTTGACAAGCGAGCAGATTGCGAAGCAGGTGGACTTCATGGTCCGGAAGGG
CTGGACCCCCTGCATTGAGTTCGACAAAATCGGAAGCGTATACCGAGAGCACTTCCATGG
CAGCGGCTACTACGATGGGCGATACTGGGTGATGTGGAAGTTGCCCATGTTTGGCTGCCA
AGATGCCGCCGCTGTGCTGCGTGAAATTGCAGAGTGCGCCAAGGAGTACCCCGAAGCCTT
CATCCGCGTGCTGGGCTTTGACGCCAAGAGGCAGGTGCAGGTCTCCGGCTTCCTTG
■■Homology search results ■■ -
sp_hit_id P19312
Definition sp|P19312|RBS6_LEMGI Ribulose bisphosphate carboxylase small chain SSU5B, chloroplastic OS=Lemna gibba
Align length 147
Score (bit) 177.0
E-value 3.0e-44
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK955128|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0022_E09, 5'
(536 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P19312|RBS6_LEMGI Ribulose bisphosphate carboxylase small cha... 177 3e-44
sp|P19311|RBS5_LEMGI Ribulose bisphosphate carboxylase small cha... 177 3e-44
sp|O48550|RBS_ZANAE Ribulose bisphosphate carboxylase small chai... 177 4e-44
sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chai... 177 4e-44
sp|P19308|RBS2_LEMGI Ribulose bisphosphate carboxylase small cha... 176 6e-44
sp|Q40004|RBS_HORVU Ribulose bisphosphate carboxylase small chai... 175 1e-43
sp|P08705|RBS_HELAN Ribulose bisphosphate carboxylase small chai... 175 1e-43
sp|Q96542|RBS_BETVE Ribulose bisphosphate carboxylase small chai... 175 1e-43
sp|P17673|RBS_TRIRP Ribulose bisphosphate carboxylase small chai... 175 1e-43
sp|P10795|RBS1A_ARATH Ribulose bisphosphate carboxylase small ch... 175 1e-43
sp|P19310|RBS4_LEMGI Ribulose bisphosphate carboxylase small cha... 174 2e-43
sp|P00871|RBS1_WHEAT Ribulose bisphosphate carboxylase small cha... 173 5e-43
sp|P00872|RBS1_LEMGI Ribulose bisphosphate carboxylase small cha... 173 5e-43
sp|Q43832|RBS2_SPIOL Ribulose bisphosphate carboxylase small cha... 172 7e-43
sp|P16031|RBS_LARLA Ribulose bisphosphate carboxylase small chai... 172 9e-43
sp|P19309|RBS3_LEMGI Ribulose bisphosphate carboxylase small cha... 172 9e-43
sp|P26667|RBS2_WHEAT Ribulose bisphosphate carboxylase small cha... 172 9e-43
sp|P10796|RBS1B_ARATH Ribulose bisphosphate carboxylase small ch... 172 9e-43
sp|P10053|RBS_PINTH Ribulose bisphosphate carboxylase small chai... 172 1e-42
sp|O65194|RBS_MEDSA Ribulose bisphosphate carboxylase small chai... 171 2e-42
sp|Q39746|RBS4_FLAPR Ribulose bisphosphate carboxylase small cha... 171 2e-42
sp|O64416|RBS_MARPA Ribulose bisphosphate carboxylase small chai... 171 2e-42
sp|P10798|RBS3B_ARATH Ribulose bisphosphate carboxylase small ch... 171 2e-42
sp|P24007|RBS_PYRPY Ribulose bisphosphate carboxylase small chai... 171 3e-42
sp|P05348|RBS_MAIZE Ribulose bisphosphate carboxylase small chai... 171 3e-42
sp|P10797|RBS2B_ARATH Ribulose bisphosphate carboxylase small ch... 171 3e-42
sp|Q39744|RBS2_FLAPR Ribulose bisphosphate carboxylase small cha... 170 4e-42
sp|Q0INY7|RBS1_ORYSJ Ribulose bisphosphate carboxylase small cha... 170 4e-42
sp|A2Y205|RBS1_ORYSI Ribulose bisphosphate carboxylase small cha... 170 4e-42
sp|P05346|RBS1_BRANA Ribulose bisphosphate carboxylase small cha... 170 5e-42

>sp|P19312|RBS6_LEMGI Ribulose bisphosphate carboxylase small chain
SSU5B, chloroplastic OS=Lemna gibba GN=SSU5B PE=3 SV=1
Length = 177

Score = 177 bits (449), Expect = 3e-44
Identities = 86/147 (58%), Positives = 103/147 (70%), Gaps = 4/147 (2%)
Frame = +2

Query: 107 FSGLRPTTL--AAPKSANPLSI--SNGSRVSAMLVWKPYDNKKFETLSYLPPLTSEQIAK 274
F+GLR + A K+ N LS SNG RVS M VW P KKFETLSYLPPL+ E +AK
Sbjct: 26 FNGLRSSVAFPATRKANNDLSTLPSNGGRVSCMQVWPPEGLKKFETLSYLPPLSVEDLAK 85

Query: 275 QVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAE 454
+VD+++R W PCIEF K G VYRE+ GYYDGRYW MWKLPMFGC DA+ V+ E+ E
Sbjct: 86 EVDYLLRNDWVPCIEFSKEGFVYRENHASPGYYDGRYWTMWKLPMFGCTDASQVIAEVEE 145

Query: 455 CAKEYPEAFIRVLGFDAKRQVQVSGFL 535
K YPE F+R++GFD KRQVQ F+
Sbjct: 146 AKKAYPEYFVRIIGFDNKRQVQCISFI 172


>sp|P19311|RBS5_LEMGI Ribulose bisphosphate carboxylase small chain
SSU5A, chloroplastic OS=Lemna gibba GN=SSU5A PE=3 SV=1
Length = 177

Score = 177 bits (449), Expect = 3e-44
Identities = 86/147 (58%), Positives = 103/147 (70%), Gaps = 4/147 (2%)
Frame = +2

Query: 107 FSGLRPTTL--AAPKSANPLSI--SNGSRVSAMLVWKPYDNKKFETLSYLPPLTSEQIAK 274
F+GLR + A K+ N LS SNG RVS M VW P KKFETLSYLPPL+ E +AK
Sbjct: 26 FNGLRSSVAFPATRKANNDLSTLPSNGGRVSCMQVWPPEGLKKFETLSYLPPLSVEDLAK 85

Query: 275 QVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAE 454
+VD+++R W PCIEF K G VYRE+ GYYDGRYW MWKLPMFGC DA+ V+ E+ E
Sbjct: 86 EVDYLLRNDWVPCIEFSKEGFVYRENHASPGYYDGRYWTMWKLPMFGCTDASQVIAEVEE 145

Query: 455 CAKEYPEAFIRVLGFDAKRQVQVSGFL 535
K YPE F+R++GFD KRQVQ F+
Sbjct: 146 AKKAYPEYFVRIIGFDNKRQVQCISFI 172


>sp|O48550|RBS_ZANAE Ribulose bisphosphate carboxylase small chain,
chloroplastic OS=Zantedeschia aethiopica GN=RBCS PE=2
SV=1
Length = 178

Score = 177 bits (448), Expect = 4e-44
Identities = 77/123 (62%), Positives = 94/123 (76%)
Frame = +2

Query: 167 SNGSRVSAMLVWKPYDNKKFETLSYLPPLTSEQIAKQVDFMVRKGWTPCIEFDKIGSVYR 346
SNG RV M VW P KKFETLSYLPPLT EQ+ ++VD+++R GW PCIEF K+G VYR
Sbjct: 49 SNGLRVRCMQVWPPEGKKKFETLSYLPPLTREQLGQEVDYLIRNGWIPCIEFCKVGFVYR 108

Query: 347 EHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVS 526
E+ + GYYDGRYW MWKLPMFGC D++ VL+E+ EC+K YP+ F R++GFD RQVQ
Sbjct: 109 EYHNSPGYYDGRYWTMWKLPMFGCTDSSQVLKEVDECSKAYPDYFNRIIGFDNTRQVQCI 168

Query: 527 GFL 535
FL
Sbjct: 169 SFL 171


>sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chain,
chloroplastic OS=Lactuca sativa GN=RBCS PE=2 SV=1
Length = 181

Score = 177 bits (448), Expect = 4e-44
Identities = 84/153 (54%), Positives = 106/153 (69%), Gaps = 6/153 (3%)
Frame = +2

Query: 95 LSKSFSGLR-----PTTLAAPKSANPLSISNGSRVSAMLVWKPYDNKKFETLSYLPPLTS 259
L+ F+GL+ P T A + L SNG RV M VW P KK+ETLSYLPPL+
Sbjct: 22 LAAPFTGLKSNVAFPVTKKANNDFSSLP-SNGGRVQCMKVWPPIGLKKYETLSYLPPLSD 80

Query: 260 EQIAKQVDFMVRKGWTPCIEFD-KIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAV 436
E ++K++D+++R W PC+EF+ + G VYREH H GYYDGRYW MWKLPMFGC D+A V
Sbjct: 81 EALSKEIDYLIRNKWIPCLEFELEHGFVYREHHHSPGYYDGRYWTMWKLPMFGCTDSAQV 140

Query: 437 LREIAECAKEYPEAFIRVLGFDAKRQVQVSGFL 535
++E+ EC KEYP AFIRV+GFD RQVQ F+
Sbjct: 141 MKEVGECKKEYPNAFIRVIGFDNIRQVQCISFI 173


>sp|P19308|RBS2_LEMGI Ribulose bisphosphate carboxylase small chain
SSU26, chloroplastic OS=Lemna gibba GN=SSU26 PE=3 SV=1
Length = 177

Score = 176 bits (446), Expect = 6e-44
Identities = 85/148 (57%), Positives = 103/148 (69%), Gaps = 5/148 (3%)
Frame = +2

Query: 107 FSGLR-----PTTLAAPKSANPLSISNGSRVSAMLVWKPYDNKKFETLSYLPPLTSEQIA 271
F+GLR P T A K+ + L SNG +VS M VW P KKFETLSYLPPL+ E +A
Sbjct: 26 FNGLRSSVAFPATRKANKNLSTLP-SNGGKVSCMQVWPPEGLKKFETLSYLPPLSVEDLA 84

Query: 272 KQVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIA 451
K+VD+++R W PCIEF K G VYRE+ GYYDGRYW MWKLPMFGC DA+ V+ E+
Sbjct: 85 KEVDYLLRNDWVPCIEFSKEGFVYRENHASPGYYDGRYWTMWKLPMFGCTDASQVIAEVE 144

Query: 452 ECAKEYPEAFIRVLGFDAKRQVQVSGFL 535
E K YPE F+R++GFD KRQVQ F+
Sbjct: 145 EAKKAYPEYFVRIIGFDNKRQVQCISFI 172


>sp|Q40004|RBS_HORVU Ribulose bisphosphate carboxylase small chain,
chloroplastic OS=Hordeum vulgare PE=2 SV=1
Length = 174

Score = 175 bits (444), Expect = 1e-43
Identities = 78/146 (53%), Positives = 102/146 (69%), Gaps = 3/146 (2%)
Frame = +2

Query: 107 FSGLRPTT---LAAPKSANPLSISNGSRVSAMLVWKPYDNKKFETLSYLPPLTSEQIAKQ 277
F GL+ T ++ +A+ S+SNG R+ M VW KKFETLSYLPPL++E + KQ
Sbjct: 16 FQGLKSTAGLPVSRRSNASSASVSNGGRIRCMQVWPIEGIKKFETLSYLPPLSTEALLKQ 75

Query: 278 VDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAEC 457
VD+++R W PC+EF K+G ++REH GYYDGRYW MWKLPMFGC DA VL E+ E
Sbjct: 76 VDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEV 135

Query: 458 AKEYPEAFIRVLGFDAKRQVQVSGFL 535
KEYP+A++R++GFD RQVQ F+
Sbjct: 136 KKEYPDAYVRIIGFDNMRQVQCVSFI 161


>sp|P08705|RBS_HELAN Ribulose bisphosphate carboxylase small chain,
chloroplastic OS=Helianthus annuus GN=RBCS PE=2 SV=1
Length = 178

Score = 175 bits (444), Expect = 1e-43
Identities = 87/151 (57%), Positives = 108/151 (71%), Gaps = 8/151 (5%)
Frame = +2

Query: 107 FSGLR-----PTTLAAPKSANPLSI--SNGSRVSAMLVWKPYDNKKFETLSYLPPLTSEQ 265
F+GL+ PTT K AN S SNG RV M VW P KK+ETLSYLPPLT Q
Sbjct: 25 FTGLKSNAAFPTT----KKANDFSTLPSNGGRVQCMKVWPPLGLKKYETLSYLPPLTETQ 80

Query: 266 IAKQVDFMVRKGWTPCIEFD-KIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLR 442
+AK+VD+++RK W PC+EF+ + G VYRE+ GYYDGRYW MWKLPMFGC D+A V++
Sbjct: 81 LAKEVDYLLRKKWVPCLEFELEHGFVYRENARSPGYYDGRYWTMWKLPMFGCTDSAQVMK 140

Query: 443 EIAECAKEYPEAFIRVLGFDAKRQVQVSGFL 535
E+AEC KEYP+A+IR++GFD RQVQ F+
Sbjct: 141 ELAECKKEYPQAWIRIIGFDNVRQVQCIMFI 171


>sp|Q96542|RBS_BETVE Ribulose bisphosphate carboxylase small chain,
chloroplastic OS=Betula verrucosa GN=RBCS1 PE=2 SV=1
Length = 182

Score = 175 bits (444), Expect = 1e-43
Identities = 79/124 (63%), Positives = 96/124 (77%), Gaps = 1/124 (0%)
Frame = +2

Query: 167 SNGSRVSAMLVWKPYDNKKFETLSYLPPLTSEQIAKQVDFMVRKGWTPCIEFD-KIGSVY 343
SNG RV M VW P KKFETLSYLPPL+SEQ+AK+VD+++RK PC+EF+ + G VY
Sbjct: 52 SNGGRVQCMQVWPPLGLKKFETLSYLPPLSSEQLAKEVDYLLRKNLIPCLEFELEHGFVY 111

Query: 344 REHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQV 523
REH GYYDGRYW MWKLPMFGC D++ VL+E+ EC K YP AFIR++GFD KRQVQ+
Sbjct: 112 REHNRSPGYYDGRYWTMWKLPMFGCNDSSQVLKELEECKKAYPSAFIRIIGFDNKRQVQI 171

Query: 524 SGFL 535
F+
Sbjct: 172 ISFI 175


>sp|P17673|RBS_TRIRP Ribulose bisphosphate carboxylase small chain,
chloroplastic OS=Trifolium repens GN=RBCS PE=3 SV=1
Length = 178

Score = 175 bits (443), Expect = 1e-43
Identities = 83/151 (54%), Positives = 109/151 (72%), Gaps = 4/151 (2%)
Frame = +2

Query: 95 LSKSFSGLRPTT-LAAPKSANPLS--ISNGSRVSAMLVWKPYDNKKFETLSYLPPLTSEQ 265
L+ F+GL+ + K N ++ SNGSRV+ M VW P KKFETLSYLPPLT EQ
Sbjct: 21 LATPFTGLKSSAGFPVTKKNNDITSITSNGSRVNCMQVWPPVGKKKFETLSYLPPLTDEQ 80

Query: 266 IAKQVDFMVRKGWTPCIEFD-KIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLR 442
+ K+V++++RKGW PC+EF+ + G V+R++ GYYDGRYW MW+LP+FG DAA VL+
Sbjct: 81 LLKEVEYLLRKGWVPCVEFELEKGFVHRQYNSSPGYYDGRYWTMWRLPLFGTTDAAQVLK 140

Query: 443 EIAECAKEYPEAFIRVLGFDAKRQVQVSGFL 535
E+AEC EYPEAFIR++GFD RQVQ F+
Sbjct: 141 EVAECKAEYPEAFIRIIGFDNVRQVQCISFI 171


>sp|P10795|RBS1A_ARATH Ribulose bisphosphate carboxylase small chain
1A, chloroplastic OS=Arabidopsis thaliana GN=RBCS-1A
PE=1 SV=2
Length = 180

Score = 175 bits (443), Expect = 1e-43
Identities = 82/148 (55%), Positives = 106/148 (71%), Gaps = 5/148 (3%)
Frame = +2

Query: 107 FSGLRPTTL--AAPKSANPLS--ISNGSRVSAMLVWKPYDNKKFETLSYLPPLTSEQIAK 274
F+GL+ + A K+ N ++ SNG RV+ M VW P KKFETLSYLP LT ++AK
Sbjct: 24 FNGLKSSAAFPATRKANNDITSITSNGGRVNCMQVWPPIGKKKFETLSYLPDLTDSELAK 83

Query: 275 QVDFMVRKGWTPCIEFD-KIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIA 451
+VD+++R W PC+EF+ + G VYREH + GYYDGRYW MWKLP+FGC D+A VL+E+
Sbjct: 84 EVDYLIRNKWIPCVEFELEHGFVYREHGNSPGYYDGRYWTMWKLPLFGCTDSAQVLKEVE 143

Query: 452 ECAKEYPEAFIRVLGFDAKRQVQVSGFL 535
EC KEYP AFIR++GFD RQVQ F+
Sbjct: 144 ECKKEYPNAFIRIIGFDNTRQVQCISFI 171


tr_hit_id Q43110
Definition tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small chain OS=Pteris vittata
Align length 147
Score (bit) 277.0
E-value 3.0e-73
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK955128|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0022_E09, 5'
(536 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small c... 277 3e-73
tr|A9T3X7|A9T3X7_PHYPA Ribulose bisphosphate carboxylase small c... 198 2e-49
tr|A9T3W5|A9T3W5_PHYPA Ribulose bisphosphate carboxylase small c... 197 4e-49
tr|A9TCL7|A9TCL7_PHYPA Ribulose bisphosphate carboxylase small c... 194 3e-48
tr|Q9SXH1|Q9SXH1_PHYPA Ribulose bisphosphate carboxylase small c... 192 9e-48
tr|Q75WT7|Q75WT7_PHYPA Ribulose bisphosphate carboxylase small c... 190 5e-47
tr|A9TT85|A9TT85_PHYPA Ribulose bisphosphate carboxylase small c... 189 6e-47
tr|A9RJ57|A9RJ57_PHYPA Ribulose bisphosphate carboxylase small c... 181 3e-44
tr|A9TKI7|A9TKI7_PHYPA Ribulose bisphosphate carboxylase small c... 180 4e-44
tr|A9S3R8|A9S3R8_PHYPA Ribulose bisphosphate carboxylase small c... 180 4e-44
tr|Q3LFQ4|Q3LFQ4_PANGI Ribulose bisphosphate carboxylase small c... 179 8e-44
tr|Q9SEB9|Q9SEB9_LACSA Ribulose bisphosphate carboxylase small c... 179 1e-43
tr|A9T9D5|A9T9D5_PHYPA Ribulose bisphosphate carboxylase small c... 177 2e-43
tr|A9NZM2|A9NZM2_PICSI Ribulose bisphosphate carboxylase small c... 177 2e-43
tr|A9TWU8|A9TWU8_PHYPA Ribulose bisphosphate carboxylase small c... 177 3e-43
tr|Q9ZWG6|Q9ZWG6_HORVU Ribulose bisphosphate carboxylase small c... 176 5e-43
tr|Q5I8Y4|Q5I8Y4_9FABA Ribulose bisphosphate carboxylase small c... 176 5e-43
tr|A9TVU8|A9TVU8_PHYPA Ribulose bisphosphate carboxylase small c... 176 5e-43
tr|A9SRS0|A9SRS0_PHYPA Ribulose bisphosphate carboxylase small c... 176 5e-43
tr|Q9ZWG3|Q9ZWG3_9POAL Ribulose bisphosphate carboxylase small c... 176 7e-43
tr|A0FIP7|A0FIP7_CAMSI Ribulose bisphosphate carboxylase small c... 176 7e-43
tr|Q9SAW5|Q9SAW5_WHEAT Ribulose bisphosphate carboxylase small c... 175 1e-42
tr|Q9S7N3|Q9S7N3_AEGLO Ribulose bisphosphate carboxylase small c... 175 1e-42
tr|A9U4X8|A9U4X8_PHYPA Ribulose bisphosphate carboxylase small c... 175 1e-42
tr|A9U4X7|A9U4X7_PHYPA Ribulose bisphosphate carboxylase small c... 175 1e-42
tr|A7LIT5|A7LIT5_9ROSI Ribulose bisphosphate carboxylase small c... 175 1e-42
tr|Q9SAX5|Q9SAX5_AEGSP Ribulose bisphosphate carboxylase small c... 175 2e-42
tr|Q0WVH4|Q0WVH4_ARATH Ribulose bisphosphate carboxylase small c... 175 2e-42
tr|Q9SAX2|Q9SAX2_9POAL Ribulose bisphosphate carboxylase small c... 174 2e-42
tr|A9SCN2|A9SCN2_PHYPA Ribulose bisphosphate carboxylase small c... 174 2e-42

>tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small
chain OS=Pteris vittata GN=rbcS4 PE=3 SV=1
Length = 174

Score = 277 bits (708), Expect = 3e-73
Identities = 128/147 (87%), Positives = 139/147 (94%)
Frame = +2

Query: 95 LSKSFSGLRPTTLAAPKSANPLSISNGSRVSAMLVWKPYDNKKFETLSYLPPLTSEQIAK 274
LSKSFSGL+ TL APK ANPL+ISNGSR+SAMLVWKPYDNKKFETLSYLPPLT++QIAK
Sbjct: 22 LSKSFSGLKANTLFAPKCANPLAISNGSRISAMLVWKPYDNKKFETLSYLPPLTNDQIAK 81

Query: 275 QVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAE 454
QV++MVRKGWTPCIEFD IGSVYREHFHGSGYYDGRYW+MWKLPMFGC D+ +VLREIAE
Sbjct: 82 QVEYMVRKGWTPCIEFDTIGSVYREHFHGSGYYDGRYWIMWKLPMFGCTDSGSVLREIAE 141

Query: 455 CAKEYPEAFIRVLGFDAKRQVQVSGFL 535
CAKEYP AFIRVLGFDAKRQVQV+GFL
Sbjct: 142 CAKEYPTAFIRVLGFDAKRQVQVAGFL 168


>tr|A9T3X7|A9T3X7_PHYPA Ribulose bisphosphate carboxylase small
chain OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_87752 PE=3 SV=1
Length = 179

Score = 198 bits (503), Expect = 2e-49
Identities = 93/148 (62%), Positives = 111/148 (75%), Gaps = 3/148 (2%)
Frame = +2

Query: 101 KSFSGLRPTTLAAPKSANPLSISNGSRVSAMLVWKPYDNKKFETLSYLPPLTSEQIAKQV 280
K FSGL+ TTL+A K+ S+ NGSRV M VW P KFET SYLPPLT +QIAKQV
Sbjct: 27 KQFSGLKSTTLSASKARRLSSVHNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQV 86

Query: 281 DFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAAAVLREIA 451
DFM+++ PCIEFD +GSV R +F G SGYYDGRYW MWKLPMFGC D+A VLREI
Sbjct: 87 DFMIQQNLIPCIEFDTVGSVSRTNFSGPGSSGYYDGRYWTMWKLPMFGCTDSAQVLREIQ 146

Query: 452 ECAKEYPEAFIRVLGFDAKRQVQVSGFL 535
EC + +P ++RVLGFD+K+QVQ+ GFL
Sbjct: 147 ECKQSFPSCWVRVLGFDSKKQVQICGFL 174


>tr|A9T3W5|A9T3W5_PHYPA Ribulose bisphosphate carboxylase small
chain OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_87740 PE=3 SV=1
Length = 179

Score = 197 bits (500), Expect = 4e-49
Identities = 93/148 (62%), Positives = 110/148 (74%), Gaps = 3/148 (2%)
Frame = +2

Query: 101 KSFSGLRPTTLAAPKSANPLSISNGSRVSAMLVWKPYDNKKFETLSYLPPLTSEQIAKQV 280
K FSGL+ TTL A K+ S+ NGSRV M VW P KFET SYLPPLT +QIAKQV
Sbjct: 27 KQFSGLKSTTLFASKARRLSSVHNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQV 86

Query: 281 DFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAAAVLREIA 451
DFM+++ PCIEFD +GSV R +F G SGYYDGRYW MWKLPMFGC D+A VLREI
Sbjct: 87 DFMIQQNLIPCIEFDTVGSVSRTNFSGPGSSGYYDGRYWTMWKLPMFGCTDSAQVLREIQ 146

Query: 452 ECAKEYPEAFIRVLGFDAKRQVQVSGFL 535
EC + +P ++RVLGFD+K+QVQ+ GFL
Sbjct: 147 ECKQSFPSCWVRVLGFDSKKQVQICGFL 174


>tr|A9TCL7|A9TCL7_PHYPA Ribulose bisphosphate carboxylase small
chain OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_221004 PE=3 SV=1
Length = 184

Score = 194 bits (492), Expect = 3e-48
Identities = 89/148 (60%), Positives = 111/148 (75%), Gaps = 3/148 (2%)
Frame = +2

Query: 101 KSFSGLRPTTLAAPKSANPLSISNGSRVSAMLVWKPYDNKKFETLSYLPPLTSEQIAKQV 280
K+FSGL+P TL + K+ ++ NGSRV M VW P KFET SYLPPLT +QIAKQV
Sbjct: 32 KAFSGLKPATLFSSKTQKLGAVQNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQV 91

Query: 281 DFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAAAVLREIA 451
D+M+++ PCIEFD +GSV R +F G SGYYDGRYW MWKLPMFGC D++ VLREI
Sbjct: 92 DYMIQQNLIPCIEFDTVGSVSRTNFSGAGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQ 151

Query: 452 ECAKEYPEAFIRVLGFDAKRQVQVSGFL 535
EC ++P ++RVLGFD+K+QVQ+ GFL
Sbjct: 152 ECKSQFPSCWVRVLGFDSKKQVQICGFL 179


>tr|Q9SXH1|Q9SXH1_PHYPA Ribulose bisphosphate carboxylase small
chain (Fragment) OS=Physcomitrella patens PE=2 SV=1
Length = 214

Score = 192 bits (488), Expect = 9e-48
Identities = 89/148 (60%), Positives = 110/148 (74%), Gaps = 3/148 (2%)
Frame = +2

Query: 101 KSFSGLRPTTLAAPKSANPLSISNGSRVSAMLVWKPYDNKKFETLSYLPPLTSEQIAKQV 280
K+FSGL+ TL + K+ S+ NGSRV M VW P KFET SYLPPLT +QIAKQV
Sbjct: 62 KAFSGLKSATLFSGKTQKLSSVQNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQV 121

Query: 281 DFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAAAVLREIA 451
D+M+++ PCIEFD +GSV R +F G SGYYDGRYW MWKLPMFGC D++ VLREI
Sbjct: 122 DYMIQQNLIPCIEFDTVGSVSRTNFSGAGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQ 181

Query: 452 ECAKEYPEAFIRVLGFDAKRQVQVSGFL 535
EC ++P ++RVLGFD+K+QVQ+ GFL
Sbjct: 182 ECKSQFPSCWVRVLGFDSKKQVQICGFL 209


>tr|Q75WT7|Q75WT7_PHYPA Ribulose bisphosphate carboxylase small
chain OS=Physcomitrella patens subsp. patens GN=PprbcS1
PE=2 SV=1
Length = 184

Score = 190 bits (482), Expect = 5e-47
Identities = 88/148 (59%), Positives = 108/148 (72%), Gaps = 3/148 (2%)
Frame = +2

Query: 101 KSFSGLRPTTLAAPKSANPLSISNGSRVSAMLVWKPYDNKKFETLSYLPPLTSEQIAKQV 280
K+FSGL+ TL KS S+ NGSRV M VW P KFET SYLPPL+ +QIA+QV
Sbjct: 32 KAFSGLKSATLFTSKSQQLSSVQNGSRVQCMQVWNPIGQPKFETFSYLPPLSDDQIARQV 91

Query: 281 DFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAAAVLREIA 451
D+M+++ PCIEFD +G+V R +F G SGYYDGRYW MWKLPMFGC D++ VLREI
Sbjct: 92 DYMIQQNLIPCIEFDTVGAVSRTNFSGSGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQ 151

Query: 452 ECAKEYPEAFIRVLGFDAKRQVQVSGFL 535
EC YP ++RVLGFD+K+QVQ+ GFL
Sbjct: 152 ECKTSYPSCWVRVLGFDSKKQVQICGFL 179


>tr|A9TT85|A9TT85_PHYPA Ribulose bisphosphate carboxylase small
chain OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_225236 PE=3 SV=1
Length = 183

Score = 189 bits (481), Expect = 6e-47
Identities = 87/148 (58%), Positives = 110/148 (74%), Gaps = 3/148 (2%)
Frame = +2

Query: 101 KSFSGLRPTTLAAPKSANPLSISNGSRVSAMLVWKPYDNKKFETLSYLPPLTSEQIAKQV 280
K+FSGL+ TL + ++ S+ NGSRV M VW P KFET SYLPPLT ++IAKQV
Sbjct: 31 KAFSGLKSATLFSSQAQTLSSVQNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDEIAKQV 90

Query: 281 DFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAAAVLREIA 451
D+M+++ PCIEFD +GSV R +F G SGYYDGRYW MWKLPMFGC D++ VLREI
Sbjct: 91 DYMIQQNLIPCIEFDTVGSVSRTNFSGAGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQ 150

Query: 452 ECAKEYPEAFIRVLGFDAKRQVQVSGFL 535
EC ++P ++RVLGFD+K+QVQ+ GFL
Sbjct: 151 ECKTQFPSCWVRVLGFDSKKQVQICGFL 178


>tr|A9RJ57|A9RJ57_PHYPA Ribulose bisphosphate carboxylase small
chain OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_115069 PE=3 SV=1
Length = 181

Score = 181 bits (458), Expect = 3e-44
Identities = 83/145 (57%), Positives = 103/145 (71%)
Frame = +2

Query: 101 KSFSGLRPTTLAAPKSANPLSISNGSRVSAMLVWKPYDNKKFETLSYLPPLTSEQIAKQV 280
K+FSGL+ T+ + K+ N S+ NGSRV M VW P KFET SYLPPL+ + IAKQV
Sbjct: 32 KAFSGLKSATVFSGKAQNSSSVQNGSRVQCMQVWNPIGMTKFETFSYLPPLSDDAIAKQV 91

Query: 281 DFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECA 460
++M+++ PC+EFD V R + GYYDGRYW MWKLPMFGCQD+A VLREI EC
Sbjct: 92 EYMIQQKLIPCLEFDNANGVSRTNNSSPGYYDGRYWTMWKLPMFGCQDSAQVLREIEECK 151

Query: 461 KEYPEAFIRVLGFDAKRQVQVSGFL 535
K +P F+RVLGFD +QVQ+ GFL
Sbjct: 152 KTFPGCFVRVLGFDNVKQVQICGFL 176


>tr|A9TKI7|A9TKI7_PHYPA Ribulose bisphosphate carboxylase small
chain OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_146969 PE=3 SV=1
Length = 181

Score = 180 bits (457), Expect = 4e-44
Identities = 84/145 (57%), Positives = 103/145 (71%)
Frame = +2

Query: 101 KSFSGLRPTTLAAPKSANPLSISNGSRVSAMLVWKPYDNKKFETLSYLPPLTSEQIAKQV 280
K+FSGL+ +TL + K+ + S+ NGSRV M VW P KFET SYLPPL+ + IAKQV
Sbjct: 32 KAFSGLKSSTLFSSKAQSLSSVQNGSRVQCMQVWNPIGMTKFETFSYLPPLSDDAIAKQV 91

Query: 281 DFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECA 460
D+M+++ PC+EFD V R + GYYDGRYW MWKLPMFGCQD A VLREI EC
Sbjct: 92 DYMIQQKLIPCLEFDNADGVSRTNNSSPGYYDGRYWTMWKLPMFGCQDPAQVLREIEECK 151

Query: 461 KEYPEAFIRVLGFDAKRQVQVSGFL 535
K +P F+RVLGFD +QVQ+ GFL
Sbjct: 152 KTFPGCFVRVLGFDNVKQVQICGFL 176


>tr|A9S3R8|A9S3R8_PHYPA Ribulose bisphosphate carboxylase small
chain OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_123666 PE=3 SV=1
Length = 181

Score = 180 bits (457), Expect = 4e-44
Identities = 84/145 (57%), Positives = 104/145 (71%)
Frame = +2

Query: 101 KSFSGLRPTTLAAPKSANPLSISNGSRVSAMLVWKPYDNKKFETLSYLPPLTSEQIAKQV 280
K+FSGL+ TL + +S S+ NGSRV+ M VW P KFET SYLPPL+ + IAKQV
Sbjct: 32 KAFSGLKSATLFSSQSQQLSSVQNGSRVNCMQVWNPIGMTKFETFSYLPPLSDDAIAKQV 91

Query: 281 DFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECA 460
++M+++ PC+EFD V RE+ GYYDGRYW MWKLPMFGCQD+A VLREI EC
Sbjct: 92 EYMIQQKLIPCLEFDNSKGVTRENNSSPGYYDGRYWTMWKLPMFGCQDSAQVLREIEECK 151

Query: 461 KEYPEAFIRVLGFDAKRQVQVSGFL 535
K +P F+RVLGFD +QVQ+ GFL
Sbjct: 152 KTFPGCFVRVLGFDNVKQVQICGFL 176