DK955133 |
Clone id |
TST39A01NGRL0022_E14 |
Library |
TST39 |
Length |
571 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0022_E14. 5' end sequence. |
Accession |
DK955133 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL162Contig1 |
Sequence |
CTCTTATCTGTGTGTGCAGTGAAGAAGGCGATGGAGTACCATCCAGGCCCAGGTCGGAAT CAGCTCTTTGTGCCAGGGCCCGTGAATGTCCCCGAGCAAGTTCTGCGCGCCATGAACCGC AACAATGAAGACTACCGCTCCCCCGCCATGCCTACCCTCTCCAAGTCCGTTCTTGAGGAT ATCAAACGCATCTTCAAGACCACAACAGCTACTTCCTTCATCATTCCCACCACAGGAACT GGTGCTTGGGAGAGTGCTCTAACCAACACCCTGTCTCCAAGGGACAAAATCCTCACCTTC AGGCTGGGGCAATTCAGTCTTCTATGGGTAGACCAGATGCAGCGGCTCAATTTTGATGTT GATGTGGTGGATGTGGAATGGGGTGCTGGTGTTGACCTCTCAGTGCTTCGAGCAAAGCTT CAGTCTGACACCAAACATGAAATTAAGGCTGTGTGCGTAGTTCACAATGAGACAGCAACA GGCGTTACCAATGATCTTGCTGGGATTCGCAATGTCATAGATGCATGCCAGCATCCAGCT CTCTTTCTTGTGGATGGGGTATCATCTATTT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q56YA5 |
Definition |
sp|Q56YA5|SGAT_ARATH Serine--glyoxylate aminotransferase OS=Arabidopsis thaliana |
Align length |
180 |
Score (bit) |
246.0 |
E-value |
8.0e-65 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK955133|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0022_E14, 5' (571 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q56YA5|SGAT_ARATH Serine--glyoxylate aminotransferase OS=Arab... 246 8e-65 sp|O08374|SGAA_HYPME Serine--glyoxylate aminotransferase OS=Hyph... 176 7e-44 sp|P55819|SGAA_METEX Serine--glyoxylate aminotransferase OS=Meth... 176 1e-43 sp|P16421|DHSS_ANACY Soluble hydrogenase 42 kDa subunit OS=Anaba... 99 2e-20 sp|Q58369|Y959_METJA Uncharacterized aminotransferase MJ0959 OS=... 77 8e-14 sp|P14776|DHSS_SYNP1 Soluble hydrogenase, small subunit OS=Synec... 72 1e-12 sp|O32148|PUCG_BACSU Purine catabolism protein pucG OS=Bacillus ... 68 3e-11 sp|P21549|SPYA_HUMAN Serine--pyruvate aminotransferase OS=Homo s... 50 1e-05 sp|Q54GT6|SPYA_DICDI Serine--pyruvate aminotransferase OS=Dictyo... 49 2e-05 sp|O35423|SPYA_MOUSE Serine--pyruvate aminotransferase, mitochon... 47 7e-05 sp|B1HPR6|PHNW_LYSSC 2-aminoethylphosphonate--pyruvate transamin... 42 0.002 sp|P31030|SPYA_RABIT Serine--pyruvate aminotransferase OS=Orycto... 42 0.003 sp|Q9KLY7|PHNW_VIBCH 2-aminoethylphosphonate--pyruvate transamin... 40 0.006 sp|A5F049|PHNW_VIBC3 2-aminoethylphosphonate--pyruvate transamin... 40 0.006 sp|A6L4N0|PHNW_BACV8 2-aminoethylphosphonate--pyruvate transamin... 40 0.006 sp|Q57SD3|PHNW_SALCH 2-aminoethylphosphonate--pyruvate transamin... 39 0.014 sp|P96060|PHNW_SALTY 2-aminoethylphosphonate--pyruvate transamin... 39 0.018 sp|A9MWZ9|PHNW_SALPB 2-aminoethylphosphonate--pyruvate transamin... 39 0.018 sp|Q6HLM0|PHNW_BACHK 2-aminoethylphosphonate--pyruvate transamin... 39 0.018 sp|Q63E45|PHNW_BACCZ 2-aminoethylphosphonate--pyruvate transamin... 39 0.018 sp|Q8RLU1|PHNW_BACCE 2-aminoethylphosphonate--pyruvate transamin... 39 0.018 sp|Q81TE0|PHNW_BACAN 2-aminoethylphosphonate--pyruvate transamin... 39 0.018 sp|A0RBE9|PHNW_BACAH 2-aminoethylphosphonate--pyruvate transamin... 39 0.018 sp|Q73BH8|PHNW_BACC1 2-aminoethylphosphonate--pyruvate transamin... 38 0.031 sp|Q5PFR0|PHNW_SALPA 2-aminoethylphosphonate--pyruvate transamin... 38 0.041 sp|Q81G81|PHNW_BACCR 2-aminoethylphosphonate--pyruvate transamin... 38 0.041 sp|Q7MF44|PHNW_VIBVY 2-aminoethylphosphonate--pyruvate transamin... 37 0.070 sp|Q8Z8W6|PHNW_SALTI 2-aminoethylphosphonate--pyruvate transamin... 37 0.070 sp|A1SY89|PHNW_PSYIN 2-aminoethylphosphonate--pyruvate transamin... 37 0.091 sp|Q9I434|PHNW_PSEAE 2-aminoethylphosphonate--pyruvate transamin... 37 0.091
>sp|Q56YA5|SGAT_ARATH Serine--glyoxylate aminotransferase OS=Arabidopsis thaliana GN=AGT1 PE=1 SV=2 Length = 401
Score = 246 bits (627), Expect = 8e-65 Identities = 114/180 (63%), Positives = 143/180 (79%) Frame = +1
Query: 31 MEYHPGPGRNQLFVPGPVNVPEQVLRAMNRNNEDYRSPAMPTLSKSVLEDIKRIFKXXXX 210 M+Y GPGR+ LFVPGPVN+PE V+RAMNRNNEDYRSPA+P L+K++LED+K+IFK Sbjct: 1 MDYMYGPGRHHLFVPGPVNIPEPVIRAMNRNNEDYRSPAIPALTKTLLEDVKKIFKTTSG 60
Query: 211 XXXXXXXXXXGAWESALTNTLSPRDKILTFRLGQFSLLWVDQMQRLNFDVDVVDVEWGAG 390 GAWESALTNTLSP D+I++F +GQFSLLW+DQ +RLNF+VDVV+ +WG G Sbjct: 61 TPFLFPTTGTGAWESALTNTLSPGDRIVSFLIGQFSLLWIDQQKRLNFNVDVVESDWGQG 120
Query: 391 VDLSVLRAKLQSDTKHEIKAVCVVHNETATGVTNDLAGIRNVIDACQHPALFLVDGVSSI 570 +L VL +KL D H IKA+C+VHNETATGVTND++ +R ++D +HPAL LVDGVSSI Sbjct: 121 ANLQVLASKLSQDENHTIKAICIVHNETATGVTNDISAVRTLLDHYKHPALLLVDGVSSI 180
>sp|O08374|SGAA_HYPME Serine--glyoxylate aminotransferase OS=Hyphomicrobium methylovorum GN=sgaA PE=3 SV=2 Length = 405
Score = 176 bits (446), Expect = 7e-44 Identities = 87/169 (51%), Positives = 108/169 (63%) Frame = +1
Query: 64 LFVPGPVNVPEQVLRAMNRNNEDYRSPAMPTLSKSVLEDIKRIFKXXXXXXXXXXXXXXG 243 LF+PGP N+P+ V AMN ED RSP P + + ED+K+ FK G Sbjct: 7 LFIPGPTNIPDAVRMAMNIPMEDMRSPEFPKFTLPLFEDLKKAFKMKDGRVFIFPSSGTG 66
Query: 244 AWESALTNTLSPRDKILTFRLGQFSLLWVDQMQRLNFDVDVVDVEWGAGVDLSVLRAKLQ 423 AWESA+ NTL+ DK+L R GQFSLLWVD +RL V+V D EWG GV + L Sbjct: 67 AWESAVENTLATGDKVLMSRFGQFSLLWVDMCERLGLKVEVCDEEWGTGVPVEKYADILA 126
Query: 424 SDTKHEIKAVCVVHNETATGVTNDLAGIRNVIDACQHPALFLVDGVSSI 570 D HEIKAV V HNETATGV++D+AG+R +DA +HPAL +VDGVSS+ Sbjct: 127 KDKNHEIKAVFVTHNETATGVSSDVAGVRKALDAAKHPALLMVDGVSSV 175
>sp|P55819|SGAA_METEX Serine--glyoxylate aminotransferase OS=Methylobacterium extorquens GN=sgaA PE=3 SV=1 Length = 379
Score = 176 bits (445), Expect = 1e-43 Identities = 86/169 (50%), Positives = 109/169 (64%) Frame = +1
Query: 49 PGRNQLFVPGPVNVPEQVLRAMNRNNEDYRSPAMPTLSKSVLEDIKRIFKXXXXXXXXXX 228 PGRN LFVPGP N+P++V+RAM +ED+RS P+L+K + ED K++F Sbjct: 2 PGRNHLFVPGPTNIPDRVMRAMMVQSEDHRSVDFPSLTKPLFEDTKKVFGSTEGTIFLFP 61
Query: 229 XXXXGAWESALTNTLSPRDKILTFRLGQFSLLWVDQMQRLNFDVDVVDVEWGAGVDLSVL 408 G WESAL+NTL+ DK+L R GQFS LW+D QRL DV V + EWG G + Sbjct: 62 ASGTGIWESALSNTLARGDKVLAARFGQFSHLWIDMAQRLGLDVVVQEEEWGTGAKPEKI 121
Query: 409 RAKLQSDTKHEIKAVCVVHNETATGVTNDLAGIRNVIDACQHPALFLVD 555 L++D HEIKAV VVHNETATGVT+++ +R IDA HPAL VD Sbjct: 122 EEALRADKNHEIKAVMVVHNETATGVTSNIGAVRKAIDAAGHPALLFVD 170
>sp|P16421|DHSS_ANACY Soluble hydrogenase 42 kDa subunit OS=Anabaena cylindrica PE=1 SV=1 Length = 383
Score = 98.6 bits (244), Expect = 2e-20 Identities = 58/169 (34%), Positives = 88/169 (52%) Frame = +1
Query: 64 LFVPGPVNVPEQVLRAMNRNNEDYRSPAMPTLSKSVLEDIKRIFKXXXXXXXXXXXXXXG 243 L +PGP VPE L A+ ++ +R+ + V +++K + + G Sbjct: 7 LMIPGPTPVPEAALLALAKHPIGHRTSEFSNMMGEVTQNLKWLHQTESDVLMLNVSGT-G 65
Query: 244 AWESALTNTLSPRDKILTFRLGQFSLLWVDQMQRLNFDVDVVDVEWGAGVDLSVLRAKLQ 423 A E+ + N LSP D+IL G+F WV+ Q +V+ + EWG +D KLQ Sbjct: 66 AVEAGMINFLSPGDRILVGSNGKFGERWVEVGQAFGLNVEAITAEWGQPLDPDKFAQKLQ 125
Query: 424 SDTKHEIKAVCVVHNETATGVTNDLAGIRNVIDACQHPALFLVDGVSSI 570 +DT EIKAV + H+ET+TGV NDL I + + AL +VD V+S+ Sbjct: 126 ADTNKEIKAVIITHSETSTGVINDLVAINSHVKE-HGQALIIVDAVTSL 173
>sp|Q58369|Y959_METJA Uncharacterized aminotransferase MJ0959 OS=Methanocaldococcus jannaschii GN=MJ0959 PE=3 SV=1 Length = 385
Score = 76.6 bits (187), Expect = 8e-14 Identities = 52/169 (30%), Positives = 83/169 (49%) Frame = +1
Query: 64 LFVPGPVNVPEQVLRAMNRNNEDYRSPAMPTLSKSVLEDIKRIFKXXXXXXXXXXXXXXG 243 L +PGP VP +VL AM +R+ L + +E +K++F Sbjct: 10 LMIPGPTMVPPEVLNAMALPVIGHRTKDYSNLLEDTIEKLKKVF-ITENDTFLITGSGTA 68
Query: 244 AWESALTNTLSPRDKILTFRLGQFSLLWVDQMQRLNFDVDVVDVEWGAGVDLSVLRAKLQ 423 A + A++N + DK+L G F + + ++ + +DVEWG + ++ L Sbjct: 69 AMDMAISNIIKRGDKVLNIVTGNFGERFANIVKAYKGEAIRLDVEWGDMAEPEAVKEIL- 127
Query: 424 SDTKHEIKAVCVVHNETATGVTNDLAGIRNVIDACQHPALFLVDGVSSI 570 D +IKAV VVHNET+TG N + I V+ + AL++VD VSS+ Sbjct: 128 -DKYDDIKAVTVVHNETSTGARNPIKEIGEVVK--DYDALYIVDTVSSL 173
>sp|P14776|DHSS_SYNP1 Soluble hydrogenase, small subunit OS=Synechococcus sp. (strain PCC 6716) PE=3 SV=1 Length = 384
Score = 72.4 bits (176), Expect = 1e-12 Identities = 48/169 (28%), Positives = 78/169 (46%) Frame = +1
Query: 64 LFVPGPVNVPEQVLRAMNRNNEDYRSPAMPTLSKSVLEDIKRIFKXXXXXXXXXXXXXXG 243 L +PGP VPE VL ++ ++ +RS + ++ IK + + G Sbjct: 7 LMIPGPTPVPESVLLSLGKHPIGHRSGEFSQIMAAMTAGIKWLHQTQNEVLILAASGT-G 65
Query: 244 AWESALTNTLSPRDKILTFRLGQFSLLWVDQMQRLNFDVDVVDVEWGAGVDLSVLRAKLQ 423 A E+ + N LS D+++ G+F W + + + WG ++ +A L Sbjct: 66 AMEAGIINFLSAGDRVVVGCNGKFGDRWGEVCDAYGLTTERISAPWGQPLNPDDFKAVLD 125
Query: 424 SDTKHEIKAVCVVHNETATGVTNDLAGIRNVIDACQHPALFLVDGVSSI 570 + KAV V H+ET+TGV NDL I + A AL +VD V+S+ Sbjct: 126 GHRQKPSKAVIVTHSETSTGVINDLEAINRHVKA-HGQALIIVDAVTSL 173
>sp|O32148|PUCG_BACSU Purine catabolism protein pucG OS=Bacillus subtilis GN=pucG PE=2 SV=1 Length = 416
Score = 68.2 bits (165), Expect = 3e-11 Identities = 47/170 (27%), Positives = 80/170 (47%), Gaps = 1/170 (0%) Frame = +1
Query: 64 LFVPGPVNVPEQVLRAMNRNNEDYRSPAMPTLSKSVLEDIKRIFKXXXXXXXXXXXXXXG 243 + PGPV V +VLR M+ PA + +E ++ +F+ Sbjct: 14 IMTPGPVEVDPRVLRVMSTPVVGQFDPAFTGIMNETMEMLRELFQTKNRWAYPIDGTSRA 73
Query: 244 AWESALTNTLSPRDKILTFRLGQFSLLWVDQMQRLNFDVDVVDVEWGAGVDLSVLRAKLQ 423 E+ L + + P D +L G+F L + +R +V +++ EWG D + +++ Sbjct: 74 GIEAVLASVIEPEDDVLIPIYGRFGYLLTEIAERYGANVHMLECEWGTVFDPEDIIREIK 133
Query: 424 SDTKHEIKAVCVVHNETATGVTNDLAGIRNVIDACQ-HPALFLVDGVSSI 570 K + K V +VH ET+TG + L I +AC+ ALF+VD V++I Sbjct: 134 ---KVKPKIVAMVHGETSTGRIHPLKAIG---EACRTEDALFIVDAVATI 177
>sp|P21549|SPYA_HUMAN Serine--pyruvate aminotransferase OS=Homo sapiens GN=AGXT PE=1 SV=1 Length = 392
Score = 49.7 bits (117), Expect = 1e-05 Identities = 45/172 (26%), Positives = 73/172 (42%), Gaps = 1/172 (0%) Frame = +1
Query: 58 NQLFV-PGPVNVPEQVLRAMNRNNEDYRSPAMPTLSKSVLEDIKRIFKXXXXXXXXXXXX 234 NQL + PGP N+P +++ A S M + + E I+ +F+ Sbjct: 22 NQLLLGPGPSNLPPRIMAAGGLQMIGSMSKDMYQIMDEIKEGIQYVFQTRNPLTLVISGS 81
Query: 235 XXGAWESALTNTLSPRDKILTFRLGQFSLLWVDQMQRLNFDVDVVDVEWGAGVDLSVLRA 414 A E+AL N L P D L G + VD +R+ V + + G L + Sbjct: 82 GHCALEAALVNVLEPGDSFLVGANGIWGQRAVDIGERIGARVHPMTKDPGGHYTLQEVEE 141
Query: 415 KLQSDTKHEIKAVCVVHNETATGVTNDLAGIRNVIDACQHPALFLVDGVSSI 570 L +H+ + + H E++TGV L G + ++ L LVD V+S+ Sbjct: 142 GL---AQHKPVLLFLTHGESSTGVLQPLDGFGELCH--RYKCLLLVDSVASL 188
>sp|Q54GT6|SPYA_DICDI Serine--pyruvate aminotransferase OS=Dictyostelium discoideum GN=agxt PE=3 SV=1 Length = 407
Score = 48.9 bits (115), Expect = 2e-05 Identities = 37/169 (21%), Positives = 74/169 (43%) Frame = +1
Query: 64 LFVPGPVNVPEQVLRAMNRNNEDYRSPAMPTLSKSVLEDIKRIFKXXXXXXXXXXXXXXG 243 L PGP N+ +V + + + Y + + +E ++ +F+ Sbjct: 21 LLGPGPSNLHPRVNQQLISSMVGYTDASYYKVMDETMELMRYLFQTDNHFTIPISGAGTA 80
Query: 244 AWESALTNTLSPRDKILTFRLGQFSLLWVDQMQRLNFDVDVVDVEWGAGVDLSVLRAKLQ 423 A E+ ++N + P DK++ G FS R ++ VD +WG L + + L Sbjct: 81 AMETCVSNLIEPGDKVVCLVSGFFSDRIYQMAVRYGGNILKVDKQWGQWFALEEIESAL- 139
Query: 424 SDTKHEIKAVCVVHNETATGVTNDLAGIRNVIDACQHPALFLVDGVSSI 570 +H+ + +V ET+TGV + G+ + ++ L +VD V+++ Sbjct: 140 --VQHKPSLLTLVFGETSTGVKQQMEGVGELCK--KYNCLLMVDCVAAL 184
>sp|O35423|SPYA_MOUSE Serine--pyruvate aminotransferase, mitochondrial OS=Mus musculus GN=Agxt PE=2 SV=2 Length = 413
Score = 47.0 bits (110), Expect = 7e-05 Identities = 42/169 (24%), Positives = 72/169 (42%) Frame = +1
Query: 64 LFVPGPVNVPEQVLRAMNRNNEDYRSPAMPTLSKSVLEDIKRIFKXXXXXXXXXXXXXXG 243 L PGP N+ +VL A + + M + + + + I+ +F+ Sbjct: 47 LLGPGPSNLAPRVLAAGSLRMIGHMQKEMLQIMEEIKQGIQYVFQTRNPLTLVVSGSGHC 106
Query: 244 AWESALTNTLSPRDKILTFRLGQFSLLWVDQMQRLNFDVDVVDVEWGAGVDLSVLRAKLQ 423 A E+AL N L P D LT G + + + R+ V + + G L + L Sbjct: 107 AMETALFNLLEPGDSFLTGTNGIWGMRAAEIADRIGARVHQMIKKPGEHYTLQEVEEGL- 165
Query: 424 SDTKHEIKAVCVVHNETATGVTNDLAGIRNVIDACQHPALFLVDGVSSI 570 +H+ + +VH E++TGV L G + ++ L LVD V+S+ Sbjct: 166 --AQHKPVLLFLVHGESSTGVVQPLDGFGELCH--RYQCLLLVDSVASL 210
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9TY57 |
Definition |
tr|A9TY57|A9TY57_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
180 |
Score (bit) |
265.0 |
E-value |
1.0e-69 |
Report |
|