DK955138 |
Clone id |
TST39A01NGRL0022_E19 |
Library |
TST39 |
Length |
581 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0022_E19. 5' end sequence. |
Accession |
DK955138 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL1167Contig1 |
Sequence |
TATGGCGCTACTCAACTCGAAGATCGTGGGTCATCACGTGAATGCTCCTTGCTTTAAGTA CTTGCATGCGGAACAACCAGCCATCACGAAGCAGACTGTGGGTTTCACGCCGATGCCTCT TTTTGCCCTGCGCAGAAACAGAGCATGCCCCTCGAAGCTCATCTGCTCTGTTCATGAAGG CGCCCTTCCTGTTGCTTCTACCTCTCCCTTGCCCGCCAGCAATGTGCAAGGAACCTCTTA CAGCCCTCCTTCTTCTGCCGTGCAATATGCGGAGGAGTTCATTGAGAAGACTATATTCAA TTGCAGATTTCTTACCCTGATGGGAGTTGTGGGCTCCCTTACTGGTTCTGTCTTATGCTT CCTTAAGGGATGTTCCTTTGTGGTGGAGTCATTCAGAGAGTATTTTTTGACTTGCTTGCA TGGCGTTGGCACGGGGAAGGTCATCCTGCTACTTGTGGAAGCAGTAGATGTATATCTCAT GGGGACTGTCATGCTCATTTTTGGAATGGGACTTTATGAGCTTTTCATAAGCACCTTGGA TGTGCCGGGTGGTAATTGCGCCTCTGGGGGCTCAAGAACGA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9ZEZ0 |
Definition |
sp|Q9ZEZ0|YREP_BUCAI UPF0114 protein in repA1-repA2 intergenic region OS=Buchnera aphidicola subsp. Acyrthosiphon pisum |
Align length |
91 |
Score (bit) |
38.9 |
E-value |
0.019 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9NWL7 |
Definition |
tr|A9NWL7|A9NWL7_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
102 |
Score (bit) |
150.0 |
E-value |
4.0e-35 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK955138|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0022_E19, 5' (581 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9NWL7|A9NWL7_PICSI Putative uncharacterized protein OS=Picea... 150 4e-35 tr|A9TW38|A9TW38_PHYPA Predicted protein OS=Physcomitrella paten... 139 1e-31 tr|A9NPX7|A9NPX7_PICSI Putative uncharacterized protein OS=Picea... 134 3e-30 tr|Q94JM4|Q94JM4_ARATH AT4g19390/T5K18_170 OS=Arabidopsis thalia... 128 2e-28 tr|Q940D6|Q940D6_ARATH AT4g19390/T5K18_170 OS=Arabidopsis thalia... 125 2e-27 tr|A7Q232|A7Q232_VITVI Chromosome chr13 scaffold_45, whole genom... 124 5e-27 tr|A9RFF8|A9RFF8_PHYPA Predicted protein OS=Physcomitrella paten... 120 7e-26 tr|A7QKN2|A7QKN2_VITVI Chromosome chr2 scaffold_113, whole genom... 119 9e-26 tr|B8B5E4|B8B5E4_ORYSI Putative uncharacterized protein OS=Oryza... 115 1e-24 tr|Q8H3C6|Q8H3C6_ORYSJ Os07g0656700 protein OS=Oryza sativa subs... 115 2e-24 tr|B6SKX4|B6SKX4_MAIZE Uncharacterized protein UPF0114 OS=Zea ma... 115 2e-24 tr|B4FCT5|B4FCT5_MAIZE Putative uncharacterized protein OS=Zea m... 115 2e-24 tr|A2YPH6|A2YPH6_ORYSI Putative uncharacterized protein OS=Oryza... 115 2e-24 tr|Q9FNA1|Q9FNA1_ARATH Genomic DNA, chromosome 5, P1 clone:MSH12... 112 1e-23 tr|Q8L645|Q8L645_ARATH Putative uncharacterized protein At5g1372... 112 1e-23 tr|A9TX04|A9TX04_PHYPA Predicted protein (Fragment) OS=Physcomit... 112 2e-23 tr|A5AN14|A5AN14_VITVI Putative uncharacterized protein OS=Vitis... 110 4e-23 tr|Q5Z9G6|Q5Z9G6_ORYSJ Os06g0710300 protein OS=Oryza sativa subs... 109 1e-22 tr|A3BFA7|A3BFA7_ORYSJ Putative uncharacterized protein OS=Oryza... 109 1e-22 tr|A2YGW0|A2YGW0_ORYSI Putative uncharacterized protein OS=Oryza... 109 1e-22 tr|Q7EYX5|Q7EYX5_ORYSJ Os07g0656600 protein OS=Oryza sativa subs... 107 6e-22 tr|B4FTW2|B4FTW2_MAIZE Putative uncharacterized protein OS=Zea m... 100 4e-20 tr|B6U4B2|B6U4B2_MAIZE Uncharacterized protein UPF0114 OS=Zea ma... 100 8e-20 tr|A7NTK8|A7NTK8_VITVI Chromosome chr18 scaffold_1, whole genome... 97 6e-19 tr|O65710|O65710_ARATH Putative uncharacterized protein AT4g1939... 94 5e-18 tr|Q7Y1G8|Q7Y1G8_ORYSJ Os03g0739700 protein OS=Oryza sativa subs... 85 3e-15 tr|A2XLU1|A2XLU1_ORYSI Putative uncharacterized protein OS=Oryza... 85 3e-15 tr|A3BMZ9|A3BMZ9_ORYSJ Putative uncharacterized protein OS=Oryza... 82 3e-14 tr|B1NY88|B1NY88_ORYSJ Putative uncharacterized protein OS=Oryza... 71 5e-11 tr|A6VK27|A6VK27_METM7 Uncharacterized protein UPF0114 OS=Methan... 71 5e-11
>tr|A9NWL7|A9NWL7_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 314
Score = 150 bits (380), Expect = 4e-35 Identities = 73/102 (71%), Positives = 86/102 (84%) Frame = +2
Query: 272 EEFIEKTIFNCRFLTLMGVVGSLTGSVLCFLKGCSFVVESFREYFLTCLHGVGTGKVILL 451 EEFIEK IFNCRFLTLM V GSL GS+LCFLKGC+FV +SF+EYF + ++ G+GKVILL Sbjct: 129 EEFIEKAIFNCRFLTLMAVAGSLAGSMLCFLKGCAFVFDSFKEYFQSYIYHHGSGKVILL 188
Query: 452 LVEAVDVYLMGTVMLIFGMGLYELFISTLDVPGGNCASGGSR 577 LVEAVDVYLMGTVMLIFGMGLYELF+++L++P N SR Sbjct: 189 LVEAVDVYLMGTVMLIFGMGLYELFVNSLEIPDRNSTQQTSR 230
>tr|A9TW38|A9TW38_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_172311 PE=4 SV=1 Length = 475
Score = 139 bits (349), Expect = 1e-31 Identities = 68/96 (70%), Positives = 74/96 (77%) Frame = +2
Query: 272 EEFIEKTIFNCRFLTLMGVVGSLTGSVLCFLKGCSFVVESFREYFLTCLHGVGTGKVILL 451 E IE+ IFNCRF TLM VVGSL GSVLCFLKG FV +SF EYF G+ T KV+ L Sbjct: 288 EAIIERVIFNCRFFTLMAVVGSLVGSVLCFLKGTLFVTQSFVEYFQAAWQGLSTSKVVFL 347
Query: 452 LVEAVDVYLMGTVMLIFGMGLYELFISTLDVPGGNC 559 LVEAVDVYLMGTVMLIFGMGLYELF+ TL+V G C Sbjct: 348 LVEAVDVYLMGTVMLIFGMGLYELFVDTLEVSGAEC 383
>tr|A9NPX7|A9NPX7_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 296
Score = 134 bits (338), Expect = 3e-30 Identities = 78/131 (59%), Positives = 88/131 (67%), Gaps = 3/131 (2%) Frame = +2
Query: 197 STSPLPASNVQGTSYSPPSSAVQYA---EEFIEKTIFNCRFLTLMGVVGSLTGSVLCFLK 367 S+S +S G + +PP + EE IE IFNCRF TLM V GSL GSVLCFLK Sbjct: 84 SSSSETSSVGSGGTLAPPIILPEQPLSLEERIEMIIFNCRFFTLMAVAGSLAGSVLCFLK 143
Query: 368 GCSFVVESFREYFLTCLHGVGTGKVILLLVEAVDVYLMGTVMLIFGMGLYELFISTLDVP 547 G +V ESFR ++ LH TGKVILLLVEA+DVYLMGTVMLIFGMGLY LFIS+LDV Sbjct: 144 GGVYVFESFRAWYSCFLHQHATGKVILLLVEALDVYLMGTVMLIFGMGLYGLFISSLDVS 203
Query: 548 GGNCASGGSRT 580 N S S T Sbjct: 204 AENSGSDDSGT 214
>tr|Q94JM4|Q94JM4_ARATH AT4g19390/T5K18_170 OS=Arabidopsis thaliana GN=At4g19390 PE=2 SV=1 Length = 273
Score = 128 bits (322), Expect = 2e-28 Identities = 65/121 (53%), Positives = 85/121 (70%) Frame = +2
Query: 179 GALPVASTSPLPASNVQGTSYSPPSSAVQYAEEFIEKTIFNCRFLTLMGVVGSLTGSVLC 358 G L ASTS +++ S ++ + EE IEK I++CRF+T +G +GSL GSVLC Sbjct: 67 GRLASASTSTSASTSTSAAVTSNSTNRFEALEEGIEKVIYSCRFMTFLGTLGSLLGSVLC 126
Query: 359 FLKGCSFVVESFREYFLTCLHGVGTGKVILLLVEAVDVYLMGTVMLIFGMGLYELFISTL 538 F+KGC +VV+SF +Y V GKVI LLVEA+D+YL+GTVML+FG+GLYELFIS L Sbjct: 127 FIKGCMYVVDSFLQY------SVNRGKVIFLLVEAIDIYLLGTVMLVFGLGLYELFISNL 180
Query: 539 D 541 D Sbjct: 181 D 181
>tr|Q940D6|Q940D6_ARATH AT4g19390/T5K18_170 OS=Arabidopsis thaliana PE=2 SV=1 Length = 273
Score = 125 bits (313), Expect = 2e-27 Identities = 64/121 (52%), Positives = 84/121 (69%) Frame = +2
Query: 179 GALPVASTSPLPASNVQGTSYSPPSSAVQYAEEFIEKTIFNCRFLTLMGVVGSLTGSVLC 358 G L ASTS +++ S ++ + EE IEK I++CRF+T +G +GSL GSVLC Sbjct: 67 GRLASASTSTSASTSTSAAVTSNSTNRFEALEEGIEKVIYSCRFMTFLGTLGSLLGSVLC 126
Query: 359 FLKGCSFVVESFREYFLTCLHGVGTGKVILLLVEAVDVYLMGTVMLIFGMGLYELFISTL 538 F+KGC +VV+SF +Y V GKVI LLVEA+D+YL+GTVML+FG+ LYELFIS L Sbjct: 127 FIKGCMYVVDSFLQY------SVNRGKVIFLLVEAIDIYLLGTVMLVFGLVLYELFISNL 180
Query: 539 D 541 D Sbjct: 181 D 181
>tr|A7Q232|A7Q232_VITVI Chromosome chr13 scaffold_45, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00028719001 PE=4 SV=1 Length = 322
Score = 124 bits (310), Expect = 5e-27 Identities = 68/139 (48%), Positives = 96/139 (69%), Gaps = 6/139 (4%) Frame = +2
Query: 149 PSKLICSVHEGALP-VASTSPLPASN---VQGTSYSPPSSAVQYAEEFIEKTIFNCRFLT 316 P++ I S + + P V S+ PL ++ + SP V+Y+E IE+ IF+ RFL Sbjct: 96 PTETILSSNPPSKPLVESSRPLNSTYNYALPDPKASPIVRFVRYSESSIERVIFDFRFLA 155
Query: 317 LMGVVGSLTGSVLCFLKGCSFVVESFREYFLTCLHGVGTGKVILLLVEAVDVYLMGTVML 496 L+ V GSL GS+LCFL GC ++V++++ Y+ +C+ G+ TGK++L LVEA+DVYL GTVML Sbjct: 156 LLAVGGSLAGSLLCFLNGCVYIVDAYKVYWTSCVKGIHTGKMVLRLVEAIDVYLAGTVML 215
Query: 497 IFGMGLYELFISTL--DVP 547 IFGMGLY LFIS + DVP Sbjct: 216 IFGMGLYGLFISNVPPDVP 234
>tr|A9RFF8|A9RFF8_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_174298 PE=4 SV=1 Length = 182
Score = 120 bits (300), Expect = 7e-26 Identities = 59/85 (69%), Positives = 69/85 (81%) Frame = +2
Query: 278 FIEKTIFNCRFLTLMGVVGSLTGSVLCFLKGCSFVVESFREYFLTCLHGVGTGKVILLLV 457 +I + IF+ RFLTL +VGSL GS+LCF+KGC F+ ESF YF CL+G+ TG VIL LV Sbjct: 6 YIVQAIFDFRFLTLTAIVGSLVGSLLCFVKGCGFICESFISYFEMCLNGLHTGNVILRLV 65
Query: 458 EAVDVYLMGTVMLIFGMGLYELFIS 532 EAVDVYL+GTVMLIFGMGLY LFIS Sbjct: 66 EAVDVYLVGTVMLIFGMGLYGLFIS 90
>tr|A7QKN2|A7QKN2_VITVI Chromosome chr2 scaffold_113, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00001191001 PE=4 SV=1 Length = 187
Score = 119 bits (299), Expect = 9e-26 Identities = 60/91 (65%), Positives = 70/91 (76%) Frame = +2
Query: 272 EEFIEKTIFNCRFLTLMGVVGSLTGSVLCFLKGCSFVVESFREYFLTCLHGVGTGKVILL 451 E IEK I+ CRFLTL GV GSL GS+LCF+KGC++V SF EYF V VILL Sbjct: 12 EGSIEKVIYGCRFLTLFGVWGSLVGSILCFIKGCTYVAMSFMEYF------VNHTNVILL 65
Query: 452 LVEAVDVYLMGTVMLIFGMGLYELFISTLDV 544 LVEA+DVYL+GTVML+FGMGLYELF+S LD+ Sbjct: 66 LVEAIDVYLLGTVMLVFGMGLYELFVSNLDL 96
>tr|B8B5E4|B8B5E4_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_27167 PE=4 SV=1 Length = 205
Score = 115 bits (289), Expect = 1e-24 Identities = 59/103 (57%), Positives = 74/103 (71%), Gaps = 2/103 (1%) Frame = +2
Query: 272 EEFIEKTIFNCRFLTLMGVVGSLTGSVLCFLKGCSFVVESFREYFLTCLHGVGTGKVILL 451 E +EK IF RFL L+ V GSL GS+LCFL GC ++ E++ Y+ +C+ GV TG+++L Sbjct: 23 ESTVEKLIFYFRFLALLAVAGSLAGSLLCFLSGCVYIKEAYHVYWTSCVRGVHTGQMVLR 82
Query: 452 LVEAVDVYLMGTVMLIFGMGLYELFIST--LDVPGGNCASGGS 574 LVEA+DVYL GTVMLIFGMGLY LFIS DVP + A GS Sbjct: 83 LVEAIDVYLAGTVMLIFGMGLYGLFISNDFPDVPASDRALKGS 125
>tr|Q8H3C6|Q8H3C6_ORYSJ Os07g0656700 protein OS=Oryza sativa subsp. japonica GN=P0047B07.113 PE=2 SV=1 Length = 286
Score = 115 bits (288), Expect = 2e-24 Identities = 57/103 (55%), Positives = 75/103 (72%), Gaps = 2/103 (1%) Frame = +2
Query: 245 PPSSAVQYAEEFIEKTIFNCRFLTLMGVVGSLTGSVLCFLKGCSFVVESFREYFLTCLHG 424 PP++ E +E+ IF+ RFL L+ V GSL GS+LCFL GC ++ E++ Y+ CL G Sbjct: 87 PPTTKSTAVETTVERVIFDFRFLALLAVAGSLAGSLLCFLNGCVYIKEAYSVYWSGCLKG 146
Query: 425 VGTGKVILLLVEAVDVYLMGTVMLIFGMGLYELFIS--TLDVP 547 V TG+++L +VEA+DVYL GTVMLIFGMGLY LFIS + DVP Sbjct: 147 VHTGQMVLKVVEAIDVYLAGTVMLIFGMGLYGLFISNTSTDVP 189
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