DK955139 |
Clone id |
TST39A01NGRL0022_E20 |
Library |
TST39 |
Length |
585 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0022_E20. 5' end sequence. |
Accession |
DK955139 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
- |
Sequence |
AAGTCATCTAACTTTGCAGCAGCAGAGATGGCAGCTACGGCATTGGCTAATCTTTTGATA GACCAAAACATATGCAAAGGGTTTCCTGCGGAGGAGATGATTATGCCATTGACCATGGTA CTTCGTGAAGGCACGTATCAGGGAAAAGAGCATGCTGCATGTGTTTTAGCATTGCTTATT GGATCTCATTACATAGATGACATTCTGTTTGACAGCATTCAGAACTGTGACACTGTGGTT GCACTAGTTGCACTTCTAGCTAGCACCAATGTCGAAGAATGTGCAAAATCAGAAGCATTA GAGGCACTTGCAGCATTGGTGAGGGCTAGGTGTGCAGGTACTTGCAGCCGGCCTCCATGG GCAGTTTTAGCAGATGCTCCTTACAGTTTTGGTCCACTTGTCACTTGTGTAGCTGTAGGA AGGCCTTCAATGCAAGAAAAGGCGATTGAAGTTCTTTCCAAGCTTTGTCGAGATCAGCCT ATTGTTTTAGGAGACTTGATTGCAGGTACACCCAAGTGTATTGCAGCCCTTGTTGAGCAT GTGATTAACTCTCCAAGATCAGAAGTAAAGGTTGGGGGAACAGCT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P37571 |
Definition |
sp|P37571|CLPC_BACSU Negative regulator of genetic competence clpC/mecB OS=Bacillus subtilis |
Align length |
51 |
Score (bit) |
32.3 |
E-value |
1.8 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9RP92 |
Definition |
tr|A9RP92|A9RP92_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
177 |
Score (bit) |
180.0 |
E-value |
6.0e-44 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK955139|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0022_E20, 5' (585 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9RP92|A9RP92_PHYPA Predicted protein OS=Physcomitrella paten... 180 6e-44 tr|A9SEV4|A9SEV4_PHYPA Predicted protein OS=Physcomitrella paten... 166 7e-40 tr|A7PL50|A7PL50_VITVI Chromosome chr7 scaffold_20, whole genome... 132 1e-29 tr|B8B4A6|B8B4A6_ORYSI Putative uncharacterized protein OS=Oryza... 119 1e-25 tr|A3B9T4|A3B9T4_ORYSJ Putative uncharacterized protein OS=Oryza... 119 1e-25 tr|A7NVF7|A7NVF7_VITVI Chromosome chr18 scaffold_1, whole genome... 107 5e-22 tr|Q9CAQ9|Q9CAQ9_ARATH Putative uncharacterized protein T5M16.5 ... 99 1e-19 tr|Q53KK4|Q53KK4_ORYSJ C2 domain, putative (Fragment) OS=Oryza s... 97 9e-19 tr|Q2R9P0|Q2R9P0_ORYSJ Armadillo/beta-catenin-like repeat family... 97 9e-19 tr|Q0IU58|Q0IU58_ORYSJ Os11g0183800 protein OS=Oryza sativa subs... 97 9e-19 tr|A3C9A5|A3C9A5_ORYSJ Putative uncharacterized protein OS=Oryza... 97 9e-19 tr|B8BJH0|B8BJH0_ORYSI Putative uncharacterized protein OS=Oryza... 95 3e-18 tr|Q9C6Y4|Q9C6Y4_ARATH Putative uncharacterized protein T7O23.25... 89 1e-16 tr|A3AH75|A3AH75_ORYSJ Putative uncharacterized protein OS=Oryza... 84 4e-15 tr|B8I7P8|B8I7P8_CLOCE Putative uncharacterized protein OS=Clost... 38 0.48 tr|B5I5K9|B5I5K9_9ACTO Clp protease ATP binding subunit OS=Strep... 35 2.4 tr|A3ZXN3|A3ZXN3_9PLAN Putative uncharacterized protein OS=Blast... 35 3.1 tr|Q2HTN2|Q2HTN2_MEDTR Peptidase A1, pepsin OS=Medicago truncatu... 35 4.0 tr|Q1AY82|Q1AY82_RUBXD ATPase AAA-2 OS=Rubrobacter xylanophilus ... 34 5.3 tr|B6F500|B6F500_LIBAS ATP-dependent Clp protease, ATP-binding s... 34 5.3 tr|B6AUJ7|B6AUJ7_9RHOB Amidase family protein OS=Rhodobacterales... 34 6.9 tr|A9FRI3|A9FRI3_SORC5 Protein kinase OS=Sorangium cellulosum (s... 34 7.0 tr|O69936|O69936_STRCO Clp protease ATP binding subunit OS=Strep... 33 9.1
>tr|A9RP92|A9RP92_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_117324 PE=4 SV=1 Length = 2132
Score = 180 bits (456), Expect = 6e-44 Identities = 94/177 (53%), Positives = 120/177 (67%), Gaps = 1/177 (0%) Frame = +1
Query: 58 IDQNICKGFPAEEMIMPLTMVLREGTYQGKEHAACVLALLIGSHYIDDILFDSIQNCDTV 237 +D + + PAE++I+PLT VLREG+ GKEHAA +A L+ S ++DD+L +S+ C TV Sbjct: 753 LDVEVAEKAPAEDIILPLTRVLREGSLAGKEHAAGAVARLLRSRHVDDVLVESVHQCGTV 812
Query: 238 VALVALLASTNVXXXXXXXXXXXXXXXXXXXXX-GTCSRPPWAVLADAPYSFGPLVTCVA 414 +ALV+LLA+TN G + PPWAVLA+ P+S PLVT +A Sbjct: 813 LALVSLLAATNSEESSTSEALEALASLARTTRRSGPFTHPPWAVLAETPFSMSPLVTHLA 872
Query: 415 VGRPSMQEKAIEVLSKLCRDQPIVLGDLIAGTPKCIAALVEHVINSPRSEVKVGGTA 585 VG P++QEKAIEVLS+LCRDQP VLGDLIA PKCIAAL + +I S EVKVGGTA Sbjct: 873 VGEPTVQEKAIEVLSRLCRDQPAVLGDLIADNPKCIAALADRIIQSSSLEVKVGGTA 929
>tr|A9SEV4|A9SEV4_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_128603 PE=4 SV=1 Length = 2108
Score = 166 bits (421), Expect = 7e-40 Identities = 87/177 (49%), Positives = 117/177 (66%), Gaps = 1/177 (0%) Frame = +1
Query: 58 IDQNICKGFPAEEMIMPLTMVLREGTYQGKEHAACVLALLIGSHYIDDILFDSIQNCDTV 237 +D I + PAE++I+PLT L+EG+ +GKEHAA +A L+ S +++D++ + + C TV Sbjct: 732 LDVEIAEKAPAEDIILPLTRTLQEGSLEGKEHAAGAVARLLRSQHVNDVMVERVHQCGTV 791
Query: 238 VALVALLASTNVXXXXXXXXXXXXXXXXXXXXXG-TCSRPPWAVLADAPYSFGPLVTCVA 414 +ALV+LLA+ N G + P WAVLA+AP+S PLVTC+A Sbjct: 792 LALVSLLAAGNSEESSTSEALEALASLARTTSRGGSFGHPLWAVLAEAPFSMSPLVTCLA 851
Query: 415 VGRPSMQEKAIEVLSKLCRDQPIVLGDLIAGTPKCIAALVEHVINSPRSEVKVGGTA 585 VG ++Q KAIEVLS+LCRDQP+VLGDLIA KCIAAL + +I S EVKVGGTA Sbjct: 852 VGEATVQGKAIEVLSRLCRDQPVVLGDLIADNQKCIAALADRIIQSSSLEVKVGGTA 908
>tr|A7PL50|A7PL50_VITVI Chromosome chr7 scaffold_20, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00019435001 PE=4 SV=1 Length = 1109
Score = 132 bits (332), Expect = 1e-29 Identities = 72/176 (40%), Positives = 98/176 (55%) Frame = +1
Query: 58 IDQNICKGFPAEEMIMPLTMVLREGTYQGKEHAACVLALLIGSHYIDDILFDSIQNCDTV 237 +D + + EE+I+P T VL EGT GK HAA +A L+ S D +L D + TV Sbjct: 779 LDHEVAEKAIPEEIIVPATRVLHEGTVSGKAHAAAAIARLLHSRQSDYVLTDCVNRAGTV 838
Query: 238 VALVALLASTNVXXXXXXXXXXXXXXXXXXXXXGTCSRPPWAVLADAPYSFGPLVTCVAV 417 +ALV+ L S + +P WAVLA+ P P+V C+A Sbjct: 839 LALVSFLESASSGSFATSEALDALAFLSRSEGASGPLKPAWAVLAEFPDRITPIVFCIAD 898
Query: 418 GRPSMQEKAIEVLSKLCRDQPIVLGDLIAGTPKCIAALVEHVINSPRSEVKVGGTA 585 P +Q+KAIE+LS+LCRDQP+VLGD IA CI+++ VINS +VK+GGTA Sbjct: 899 AAPMLQDKAIEILSRLCRDQPVVLGDKIACATGCISSIAMRVINSRNMKVKIGGTA 954
>tr|B8B4A6|B8B4A6_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_22208 PE=4 SV=1 Length = 2111
Score = 119 bits (298), Expect = 1e-25 Identities = 67/176 (38%), Positives = 96/176 (54%) Frame = +1
Query: 58 IDQNICKGFPAEEMIMPLTMVLREGTYQGKEHAACVLALLIGSHYIDDILFDSIQNCDTV 237 +D + EE+I P+T VLREG+ G+ HAA +A L+ I+ L D+I V Sbjct: 760 LDHELSLQVSFEEIIFPITHVLREGSIDGRTHAAAAIARLLQCRPINQPLSDTINRSGAV 819
Query: 238 VALVALLASTNVXXXXXXXXXXXXXXXXXXXXXGTCSRPPWAVLADAPYSFGPLVTCVAV 417 +AL LL + N ++ PW VLA+ P++ PLV+CVA Sbjct: 820 LALAGLLEAANGEAAATSEVVDALVLLSKPKVSSGHTKAPWTVLAENPHTILPLVSCVAD 879
Query: 418 GRPSMQEKAIEVLSKLCRDQPIVLGDLIAGTPKCIAALVEHVINSPRSEVKVGGTA 585 PS+Q+KAIEVLS+LC DQ ++G L++ P CI+++ VI S +VKVGG A Sbjct: 880 AAPSLQDKAIEVLSRLCSDQHDIVGGLVSEIPGCISSVARRVIGSNMLKVKVGGCA 935
>tr|A3B9T4|A3B9T4_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_019806 PE=4 SV=1 Length = 2173
Score = 119 bits (298), Expect = 1e-25 Identities = 67/176 (38%), Positives = 96/176 (54%) Frame = +1
Query: 58 IDQNICKGFPAEEMIMPLTMVLREGTYQGKEHAACVLALLIGSHYIDDILFDSIQNCDTV 237 +D + EE+I P+T VLREG+ G+ HAA +A L+ I+ L D+I V Sbjct: 760 LDHELSLQVSFEEIIFPITHVLREGSIDGRTHAAAAIARLLQCRPINQPLSDTINRSGAV 819
Query: 238 VALVALLASTNVXXXXXXXXXXXXXXXXXXXXXGTCSRPPWAVLADAPYSFGPLVTCVAV 417 +AL LL + N ++ PW VLA+ P++ PLV+CVA Sbjct: 820 LALAGLLEAANGEAAATSEVVDALVLLSKPKVSSGHTKAPWTVLAENPHTILPLVSCVAD 879
Query: 418 GRPSMQEKAIEVLSKLCRDQPIVLGDLIAGTPKCIAALVEHVINSPRSEVKVGGTA 585 PS+Q+KAIEVLS+LC DQ ++G L++ P CI+++ VI S +VKVGG A Sbjct: 880 AAPSLQDKAIEVLSRLCSDQHDIVGGLVSEIPGCISSVARRVIGSNMLKVKVGGCA 935
>tr|A7NVF7|A7NVF7_VITVI Chromosome chr18 scaffold_1, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00015414001 PE=4 SV=1 Length = 2109
Score = 107 bits (267), Expect = 5e-22 Identities = 62/165 (37%), Positives = 91/165 (55%) Frame = +1
Query: 91 EEMIMPLTMVLREGTYQGKEHAACVLALLIGSHYIDDILFDSIQNCDTVVALVALLASTN 270 E+++ LT VL EGT +GK++A+ L L+ + D+L + Q V+ALV L S + Sbjct: 734 EDVVSALTRVLGEGTSEGKKNASRALHQLLKHFPVGDVLTGNAQCRFAVLALVDSLNSMD 793
Query: 271 VXXXXXXXXXXXXXXXXXXXXXGTCSRPPWAVLADAPYSFGPLVTCVAVGRPSMQEKAIE 450 + + PW+ LA+ P S LV C+A G P +Q+KAIE Sbjct: 794 LDGTDAADALEVVALLARMKQSVNFTYSPWSALAEVPSSLESLVRCLAEGPPLVQDKAIE 853
Query: 451 VLSKLCRDQPIVLGDLIAGTPKCIAALVEHVINSPRSEVKVGGTA 585 +LS+LC DQP+VLGDL+ + I +L ++NS EV+VGGTA Sbjct: 854 ILSRLCGDQPVVLGDLLVAQSRSIGSLANRIMNSSSLEVRVGGTA 898
>tr|Q9CAQ9|Q9CAQ9_ARATH Putative uncharacterized protein T5M16.5 OS=Arabidopsis thaliana GN=At1g77460 PE=4 SV=1 Length = 2110
Score = 99.4 bits (246), Expect = 1e-19 Identities = 59/175 (33%), Positives = 90/175 (51%) Frame = +1
Query: 61 DQNICKGFPAEEMIMPLTMVLREGTYQGKEHAACVLALLIGSHYIDDILFDSIQNCDTVV 240 D +I AE+++ T +L +G+ +GK +A+ L L+ + + D+L S Q ++ Sbjct: 725 DPDIAAEALAEDVVSAFTRILADGSPEGKRNASRALHQLLKNFPVCDVLKGSAQCRFAIL 784
Query: 241 ALVALLASTNVXXXXXXXXXXXXXXXXXXXXXGTCSRPPWAVLADAPYSFGPLVTCVAVG 420 +LV L S +V S PPW LA+ P S LV C+A G Sbjct: 785 SLVDSLKSIDVDSADAFNILEVVALLAKTKSGVNFSYPPWIALAEVPSSLETLVQCLAEG 844
Query: 421 RPSMQEKAIEVLSKLCRDQPIVLGDLIAGTPKCIAALVEHVINSPRSEVKVGGTA 585 +Q+KAIEVLS+LC DQ +L +LI PK + L + ++N+ EV+VG TA Sbjct: 845 HTLVQDKAIEVLSRLCSDQQFLLSELIVSRPKSMLVLADRIVNASSLEVRVGSTA 899
>tr|Q53KK4|Q53KK4_ORYSJ C2 domain, putative (Fragment) OS=Oryza sativa subsp. japonica GN=LOC_Os11g08090 PE=4 SV=1 Length = 1497
Score = 96.7 bits (239), Expect = 9e-19 Identities = 54/172 (31%), Positives = 89/172 (51%) Frame = +1
Query: 61 DQNICKGFPAEEMIMPLTMVLREGTYQGKEHAACVLALLIGSHYIDDILFDSIQNCDTVV 240 D +I K +++ LT VL+EG+ +GK A+ L L+ +++++ D Q + Sbjct: 816 DAHIAKEALDGNIVLALTRVLKEGSLEGKISASRSLCQLLNQFPLNEVIPDYSQCYFIIH 875
Query: 241 ALVALLASTNVXXXXXXXXXXXXXXXXXXXXXGTCSRPPWAVLADAPYSFGPLVTCVAVG 420 AL+ L+ N+ S P W+ D P S PLV C++VG Sbjct: 876 ALLVCLSGINLENATNLDPLNVLAWMARTKEGAHFSSPLWSAFLDVPESLEPLVRCISVG 935
Query: 421 RPSMQEKAIEVLSKLCRDQPIVLGDLIAGTPKCIAALVEHVINSPRSEVKVG 576 P +Q+KAI++L+ LC+DQP +LG+ + + CIA+L VI S E+++G Sbjct: 936 LPPIQDKAIQILASLCQDQPSLLGEHLNRSQGCIASLASRVIESTNMEIRIG 987
>tr|Q2R9P0|Q2R9P0_ORYSJ Armadillo/beta-catenin-like repeat family protein, expressed OS=Oryza sativa subsp. japonica GN=LOC_Os11g08090 PE=4 SV=2 Length = 2177
Score = 96.7 bits (239), Expect = 9e-19 Identities = 54/172 (31%), Positives = 89/172 (51%) Frame = +1
Query: 61 DQNICKGFPAEEMIMPLTMVLREGTYQGKEHAACVLALLIGSHYIDDILFDSIQNCDTVV 240 D +I K +++ LT VL+EG+ +GK A+ L L+ +++++ D Q + Sbjct: 816 DAHIAKEALDGNIVLALTRVLKEGSLEGKISASRSLCQLLNQFPLNEVIPDYSQCYFIIH 875
Query: 241 ALVALLASTNVXXXXXXXXXXXXXXXXXXXXXGTCSRPPWAVLADAPYSFGPLVTCVAVG 420 AL+ L+ N+ S P W+ D P S PLV C++VG Sbjct: 876 ALLVCLSGINLENATNLDPLNVLAWMARTKEGAHFSSPLWSAFLDVPESLEPLVRCISVG 935
Query: 421 RPSMQEKAIEVLSKLCRDQPIVLGDLIAGTPKCIAALVEHVINSPRSEVKVG 576 P +Q+KAI++L+ LC+DQP +LG+ + + CIA+L VI S E+++G Sbjct: 936 LPPIQDKAIQILASLCQDQPSLLGEHLNRSQGCIASLASRVIESTNMEIRIG 987
>tr|Q0IU58|Q0IU58_ORYSJ Os11g0183800 protein OS=Oryza sativa subsp. japonica GN=Os11g0183800 PE=4 SV=1 Length = 2156
Score = 96.7 bits (239), Expect = 9e-19 Identities = 54/172 (31%), Positives = 89/172 (51%) Frame = +1
Query: 61 DQNICKGFPAEEMIMPLTMVLREGTYQGKEHAACVLALLIGSHYIDDILFDSIQNCDTVV 240 D +I K +++ LT VL+EG+ +GK A+ L L+ +++++ D Q + Sbjct: 777 DAHIAKEALDGNIVLALTRVLKEGSLEGKISASRSLCQLLNQFPLNEVIPDYSQCYFIIH 836
Query: 241 ALVALLASTNVXXXXXXXXXXXXXXXXXXXXXGTCSRPPWAVLADAPYSFGPLVTCVAVG 420 AL+ L+ N+ S P W+ D P S PLV C++VG Sbjct: 837 ALLVCLSGINLENATNLDPLNVLAWMARTKEGAHFSSPLWSAFLDVPESLEPLVRCISVG 896
Query: 421 RPSMQEKAIEVLSKLCRDQPIVLGDLIAGTPKCIAALVEHVINSPRSEVKVG 576 P +Q+KAI++L+ LC+DQP +LG+ + + CIA+L VI S E+++G Sbjct: 897 LPPIQDKAIQILASLCQDQPSLLGEHLNRSQGCIASLASRVIESTNMEIRIG 948
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